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# Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808

>RSP_3623 putative integrase
MHSEHGRQNVKVELKGVHRVRRKLASGETAVYHYAWRGGPRIDAAPGSAE
FVAAYNAAHAARDRPVHHDGTLQALITAYQKTPAFTDLAEATRKGYIRHI
RQIEADFGDMPVQALADPRVRGEFLDWRDRLAQKSKRSADYAFSVLARIL
SWAHDRRKIPVNPCEKPGRLYTGSRADSIWTEAQIAAFLAVAPRPVRLPF
LLAIWTGQRQADILQLTWTAYDGQAIRLRQSKTGRHMLIPVAQPLREAME
EAKARRRTLTICETSRGQPWTSDGFKTSFGKAQASAGIEGVTFHDLRGTA
VTFLALAGCSVPEIAALTGHSLKDAEGILSKHYLGRDRRLGESAVAKLEK
HGVGTPTVKRAVKRRGPEGGDSV
>RSP_3007 hypothetical protein
MDQSTKAPKARKRDPDTKLAQHRLSVLELAKELGNVAEACRQRGLDRTSF
YEWKRRFQTQGFEGLKDLPPIHKSHPQSTPPETVARIKTLALAHPAYGCN
RFEAMLALEGIRVSSITIQKILNENGLGTKSDRWLALEQANAEKRIELTA
EQAAFIEKLNPCFRERHVESSAPGELLSADTFFVGALKGIGTG
>RSP_3937 probable transposase protein, Y4bF
MGWVLMSERELNRIEILSKVLDRRMTTTEASVLLAIGPRQVQRLLRRLRE
DGAAATRHGLRGRPSNHRLSPGLRDLALALVRETYVDFGPTLAAEKLAER
DGLHVSRETLRKWMVEDGLWLSRPQRRRFHQPRLRREHLGELVQIDGSDH
HWFEDRAPACTLLVFIDDATSRLMEMRFVPSESTFAYFAALECYLTRHGR
PTAFYSDKHSVFRVARQDARTGHGMTQFGRALAELNIEILCANSSQAKGR
VERANRTLQDRLVKEMRLAGISDMEAGNAFLPGFIERHNAQFARVPARPD
DRHRPLNLPPDRLADILCWRDQRYVGNQLTFTYEHRRILLEESDLTRGIV
GKYVDTYAFPDGRFEARWKGISLPYRSFDPEQQHVTHAAITANKRLSDVL
ALARSLQESQPPRVSRVGRQRTVYEPTGRRNDGWNSKLARRARQRADGTA
KPPDIAAE
>RSP_3313 possible phage integrase family protein
MSRLTGLNKREGTWRIRRRVPKRYKHIDGREFVNLSLHTDSMDVARQKAP
KVWQDMLEAWEAKLAGDTRDAEKLFEAARELAANRGYRFLHARDVAQLSR
AELEARLAAYERAGAAPAEPDPIEAAAVLGVVAAPKITMSRALEIYWDVA
EKAKTRGKSADQIRRWRNPRIKAFRNFIEVVGDKALEDLVPDDMLDFMAW
WEDRLETEGLTPNSANKDLAHIGSTLREVIKKKRLPINPPLSGYALPEGE
KRKRLPWSDDWIRDKLLAPGALAGLNSEARAIMLIMLNTGARPSELQALT
SSRIVLDADVPHISIEGEARTLKSPRARRKIPLTGVSLEAARRHPEGFPR
YQDNPALSATVNKFLRENGLTESPKHTLYGFRHSFEDRCLAAGIDERIRR
DLLGHALTREEYGAGGTLEHVHRLLLPIAL
>RSP_3780 hypothetical protein
MEDGTLNRAQLARAFSVSENTITKWISQGMPVMSDGQNGVAYEFRLRHCY
AWRMERDARARAAKAQGDRLAAQAALAFRNLDEDQAEEEAELTADDLKKW
SEAEYHRNRVAEQRGDLVRAGRMRELLEELMVSFGNALDTLPDFCELNFS
LSAEQVAKLQERCDAARIDARARIEAALLRPGEVVAMGAQKALDL
>RSP_3542 hypothetical protein
MRIDGGAADAFVDGGAGGSDAAVGLGREVDGGVPNVEVFRRILRDHLVET
SPLGPGDELMGEPVTVRRLHSVRTAGQATGIDQRRMRRMLAEAGIVADAA
EGTCDGWETFDAAAAQPILDDLTALTHRNMSPNKATHSEGRALRELKERA
RVIANDDPLLGAKRGGRVTVSLDWPQGRTLRKYVDTYLRFGRNSVVLLDR
DHMKGPREAKDRQRMSYWQERFISYVLNLWHDEKKPPLAPLARMAETQFP
IPPEEIARDRWYPTITTLQTRKNAISEVAQTLGRKGIRQGANLKGAGSTD
IPALMFGEYCAVDQVYLSIHTDGKGIVRATEIDPAKASEDLEDNEICRLW
LHLMIDVATRLPLGWIIAESADADHSHALLRMATRDKTKEKVRYRCKRDP
APPAGLLLTTADNGTATRNGTVYASQLGIDSIVMKSRTHHSTDNSFIERP
FGTLQWQVLNFLDGYAGSRPGELEGYEPEANARITHDELYGIITRYFVDE
YPFAPHRGTGMYKATPWQKYDEVTKFYGGIDVPNRRDRCLHLGVKRKMHT
TSEGVNPFNIPFNSTALQVFAAGRSKEVTVHIDPDFIRHAYVTAKGHPEI
IKVDLRMTAFNDLTLEEILDLQKATAEANPKKRVLNNGHFQEALAQRARV
NRASSRIPRPRRAIGPSRNWRKRPITWPRSKRDLYRRWV
>RSP_3129 serine/threonine protein kinase
MTEPRLPNGTRIAGHVITDQIGRGGFGITYRANVLETGATVALKEYFPCD
MAHRDAQGFVRPLPRAERMYEEGLRAFITEANILKALPQQAGLVRVRGAF
EKFGTAYCAMDFIEGEPLSRLAQATLQRTGFIAEDLLRSFLAPICLALET
VHSTNLVHRDVKPANIMISRRDQQPILIDFGAARPSGQRGSLAMFTRSYA
PVELFPRAQVRSAQPLEEGPWSDIYSLSVMLYEMATRQLPPSAPDRAAAV
AAGAPDPYVPLTALLAQRRLRGSYSPAFASAVDAGCALWPEARPRTVRQF
AYMAGVEMGSAPPPTPRRTVTGAAPSPSSSVPRSQRRPVNRQSIAMVLLM
LLIAGAAVSYGVVSRQPDWVAYR
>RSP_3769 Adenine-specific DNA methyltransferase
MKQVPPAAPVAPWLGGKKRLHPLILERIEAIPHRAYVEPFVGMGGIFLRR
RFRPRLEVMNDRNGEIINLFRILQRHYPQLLEIMRFQICSRREFDRLRLT
DPATLTDLERAARFLYLQRLSFGGKPNGSFGISPGNGPLFSLARLEPLLD
AARTRLDGVVFECLDWADLIPRYDTAETLFYLDPPYFGGENDYGKGLFDR
AQFARIAEILGSLKGAFLLSINDTPEIRALFGRFHLEPVRLNYSVSAAGS
TEAQELLVSNRERIATLL
>RSP_3216 putative DNA repair exonuclease
MAFTFLHTADLHLDAPLRAVALRDPELAAEIGVASRTAFSRIVDLCLAEA
VAFLVIAGDLWDGTYSSTKTPRFLKQELLRLEAAGIGCYILRGNHDALAR
QTGELEAPANTTVFGARPSTVELSIDGQPVALHGLSFREPHAPESLLPRY
PAPKPGAFNLGLMHTSLNGSPGHDPYAPCSLAELEAHGYDYWALGHIHRR
FVHRGRATVVMPGTPQGRDIGEAGAASVTLVQVGDDGAVTLEERSVAPLR
FDRLALDCTGIADWSDLLAHLDRALRAAAEAPRAEDHLVLRPVLTGATPL
AWRIARDRDRLTEEARALSAGRRLWIDKLELRLSEEGAELPGAALPEDLV
RLVQEDLPEDPALNAALLAATQELARDLPPEARDLLGQDEAAMAALCRSL
LAEGTPLILAELAAEASD
>RSP_3758 Cytosine-specific DNA methylase
MRPIGIDLFAGAGGLSLGFEQAGFDVAAAVEIDPVHCAVHKFNFPDTAVI
PRSVVGLTAEEIRESAGIGNRPIDCVFGGPPCQGFSLIGHRALEDPRNSL
VLEFVRLVRELDARTFVFENVKGLTVGSHRTFLSELVAAFGMAGYDVRLP
WKVLDAADYGTPQHRQRLFLIGAKRGETLPEIPPPQTNAADARKPLAHLP
GGPTVRDAIEDLPDADRFASLVESDAVRTSAMGEPSTYAAELRCLNNDAW
HYGYPRNWTPTWMTSSARTAHSEISRRRFQETPQGAVEPISRFYKLAPGG
LCNTLRAGTDGARGAFTSPRPIHYEYNRCITVREMARLHGFPDWFRLHAT
KWHGGRQVGNSVPPPLARAVASEIVRALGVAPERPARAIDLGEPSLLYME
MSEAAEHFGVAAPSSRRDRKSGAKKRKQHEIEAARVQLRVVNG
>RSP_3475 Serine/Threonine protein kinase
MIGEQPGDIFRRGEILNHTYEIEGVLGRGGTGEIYRARNLISGRIVAVKA
LNRRFSGNDDYIGLMRREEQLRDVIDDAVVRYTECSRSDGGHVFLVMDHI
EGPSLAQAMEAGRIEARDLLIVAHRVAEGLRAAHRHGIVHRDLSPDNIIL
RGGAPERATIIDFGIAKDLSAGAQTIVGNDFAGKYEYAAPEQIDGRAEPR
SDLYALGATLLAAFRGEAPFAGATPGEIVRRKGRPLDTEGVPEPLRGLID
RLAAPEAERRPASAAAVVEELDRLLRPQAEPDRRRRVWPALAALLLLAVL
AVGGWIALRPPLAEPYRLTASAADLAGEAPDRAAAARIAAAYARAAGHES
HGLRIARGAPEGWADAAAEVLALAATLDDWRLALNGAEAALSGRAPDARS
AAMVETRFRDWASRRGFEPRLQIEVVPPPLDPQAVSALLQRHADCGPLSE
GGTEGVITGAVATAETAAALERALADLRGDRPLHLAITVLNPAICAVRQA
LPDRPAQGLSIWLGEAATGAPNLAGIYGPGDYPLVEIRLPAGMSGLALWV
GLVDVTGSVLNLLPNVYSDESRIDRLGTVANGVRTIRVMPLEFQVAGGTQ
LFALQVEARDFGRSELVAVVSRGDLFALRRPKDESVASFTEALSALRRDD
PDRLVAVTRRLLESRPSR
>RSP_3812 recombinase
MRGREASRETGASQSDPDVPAVAYVRMSTDHQKYSTENQLDVIRSYAAAR
GLQILRVFEDSGRSGLRLDGREALQNLMGEVQSGRADFKAILVYDVSRWG
RFQDADEGAYHEHVCSRAGIRVHYCGEQFENDGSIGSNLLKTVKRVMAGE
YSRELSVKVFAGQCRLVELGYRQGGAAGYGLRRVLIDEHGSPKGELSRGE
QKSLQTDRVILVPGPEEEQRVVQRMYAMFVDEGRPEREIAKILNADGHRT
DLDRPWTRATVHQVLTSEKYIGNNVFAKVSFKLKQRRVVNPREMWIRAEG
AYPAIVDQALFLRAREIVDARSRHFSDEQLLDALRAILRRQGMLSGLIID
EEENLPSSSAYRSRFGSLLRAYRLIGYEPDRDYSYIEANRALRQAHPQVV
AEIIAGVTRHGGSAVQDPDTDLVRVNDEFTVSIVLARCTATAAGSLRWRI
RLDTGLVPDITIAVRMDEVNEAPRDYYVLPSIDMTVGKLKLAEQNGLALD
AYRFDTLDFFYALASRARIAEVA
>RSP_3360 Adenine specific DNA methyltransferase, D12 class
MAPWIGGKRNLARRICAILDRSPCLTYAEPFVGMAGIFLRRSSRPRAEVI
NDRGRDVANLFRILQRHYPQFLDTLRFQLTTRAEFERLGATDPDTLTDLE
RAARFLYLQRTAFGGKVSGRNFGVSSHRPGRFNLTTLEPMLEDLHSRLAG
VIVECLDWADFLARYDRPETLFYLDPPYWGSETDYGRGLFQREDFGLMAE
RLAKLQGRFLLSINDVPQIRAIFGRFRITEVTTTYSISGSAKGNGTARPE
LLVSNWDIGEEG
>RSP_3643 hypothetical protein
MSSMAIDNDAVEILIAARRVANFACLQGVPADSRHPRACYQHMGAILVDT
TLQAGLNYANVVRPRVTRALALFPEATTIGALIEIVESGKSAAILNWQHP
LKISRFERIVNFLHRNDVRDSKELRRRLSNKDFCALLQDIHGVGPKTVDY
MACLVGVESIAVDRHIRSFAQEVGILDKDYSFLKHVFCAAADLLAISRRE
FDAWVWRHEVERKSPQMAFSF
>RSP_3757 Conserved hypothetical protein
MFIQRAVIRNYRCLKQANVTFNDKLNVIVGNNECGKSTLLEAIHLALTGQ
LNGRPLQIELHPHLFNLDLVLEYIEALKAGRAPAPPSILIEVYLADDPAL
TKLKGNNNTLGLDLPGVALLIDLNPAYAEDFAQYVSDPSEIRTIPMEYYW
IKWRDFAENDILNSRVIPLHASLIDASTIKNNAAASRYVIDIVKESLTSK
EKVDLALTYRLMKDRFLEEPKVKAINDALAAKKGKISDKVISVSLDTSAR
ANWEAGIMPHLDDIPLPLVGKGEQNSVKIKLAMETSAKSHIILIEEAENH
LSYASLNELIGHIAANAGSRQIFITTHSSFVLNKLGVESVLLFLRGEGVR
LTDLKDRTTQNYFMKLPGHDTLRLILAKRSILVEGPSDELIVQRAYHMKH
GKMPLEDGVDVISVNSLAFKRFLEIAVLLKKTADIVTDNDADVAALEKKY
AEYLNSDIVKIQYDKDETAHTLEPQLVKKNGLATINAVLGKAFADEASAI
EHMIKYKAETGLKFFETNVEWSPPDYIARAVR
>RSP_3635 putative adenine-specific DNA methyltransferase
MKQVPPAAPVAPWLGGKKRLHPLILERIEAIPHRAYVEPFVGMGGIFLRR
RFRPRLEVMNDRNGEIINLFRILQRHYPQLLEIMRFQICSRREFDRLRLT
DPATLTDLERAARFLYLQRLSFGGKLDGVFGVSAGHGPRFSLARLEPVLD
AAHERLDGVVFESLDWADLIPRYDTTETLFYLDPPYFGGENDYGKGLFDR
AQFARIAEILGGLKGAFLLSINDTPEIRALFGRFHLEPVRLSYSVSASGG
TEAQELLVSNRERIATLL
>RSP_3012 Probable transposase
MPDDGDGFDGRIDVVRRTRGYRHWPDEVKARIMAESFRTGVRVTDVARRH
GVLAHQLSAWRRQDRKGLLALPDDAVEGLEIAFVPVAVEPDPVAAPEASS
SSGTVTIEIGTVVLRVPGDVPAERAAALVRALQETP
>RSP_3762 patch repair protein
MADTRSPEQRRQIMRAVGTKNTGPELIVRSLLHAKGYRYRLHARSLPGQP
DIVFPARHKAIFVNGCFWHGHDCAKGRLPTSRLDYWGPKIEANVARDRRK
LSELEALGWQTLVVWQCELKDIERVGSRLCAFLGPTKTDRQA
>RSP_3134 Serine/threonine protein kinase
MTAMASELQPGDVIQDTYRVEARLGQGGMGTTWRGVNLTTQDVVAIKVMT
PEIALVPKAVELFRREAQLLRKVQSDAVIRYETTLQDREGRLYLIMEFVD
GQPLSHYLERGARLAPGDVLRLGRRMAGALAAIHALGIVHRDVAPDNIML
PDGDIGHCKLIDFGLASNTSGTEASIIGASYAGKYSYSSPEQFGLHGARV
GPASDIYSLGLVLMKVCGLKVPGEGMGMAAVEVRRENVTIPRDAGLPPAL
ARLLEAMLRTRPDERPADLQKLFAEAAPGLERAAPARTPRRSGLALAAGA
GVLAAAGAGLWFALPYLDTPPGSRVVTDARAVVAAHDPLAEIESRFAAGD
VETAFASLMALANDQAGPPETRRQAYFALGRMYDPASFNASRSPFKAPNA
SAARRNYQAAADLGSAEARQALVLLRE
>RSP_3805 possible integrase
MREYRIGRLNGRFVVSWWEDGARRRYRLDARTRAEAEVEALDRIRRETLP
SGATTVRDLWAAYLADRKGRPVERNMRSSGNAVLPHFGALRPDQITPEAC
RSYTKARRKTVSVGTVWTELGHLRTCLLWAAKRGLIQVAPHIERPAKPAP
RDRYLTHAEVSRLMEAECEPHIKLAITVLLTTAARVGAVLELTWDRVDLE
RGQIRLRVEAEGPRKGRATVPINNTLRAALTSARAAALSDHVIEWAGGPV
KCIRKGFLRAVSNAGLLDVTLHTLRHTAAVHMAEAGVPMDEISQYLGHSN
VQITSSVYARFSPQHLRKAADALEFGALRVVK
>RSP_3756 hypothetical protein
MLSVNRIVISAAGGGKTTRVVDQALACEQGQGATALITYTRNNVREIQLK
AYERTRTIPSHVEVISWYSFLLRELARPYRSAMHASRVDGIHWVEGKSVP
YIPEARTSGHYFFDGSRIYSDKIAKFVCECDRRSGGAIMRRLKQRFRHII
IDEIQDMAGYDLDLLELILKAGVPVTFVGDHRQATFATNNASKNKVFSGP
AIIKKFELWKKQGLVEIEYETHTHRCNQTIADLGDGFFPNEPKTVSRNDK
VTGHDGVFLVSSADVGEYMKRFAPQVLRYSAATNCDLDEAMNFGESKGLT
FERVLIYPHGPARKWLASGDIRHVEKSLTKMYVAVTRARYSVAFVHDGKI
CSVAATKWVPG
>RSP_6202 hypothetical protein
MTPEDAARAALIRTRCHPARITEIIAEVAEATGWEPQEITSARVFPGLVQ
ARDLACFIARREGFSLTQIGNVLRRDHSSIRSALQREQRRRGGTS
>RSP_3553 dnaE, DNA polymerase III alpha chain
MSNAPRFIHLRVHTEYSLLEGAVPVKKLIGLCTAAAMPAVAVTDTNAMFA
ALEFSVLASGAGIQPIVGCQVSVAYETAALGERPKPPAPVVLLAQTETGY
GNLMKLSSCLYLGKEGALPQVTPSELERHAEGLICLTGGPDGPVGRHLRE
GQRAKAEALLGRLAAIYPGRLYVELQRHPGEGGRLTEAERATEPGHVELA
YAMGLPLVATNDVYFPKPEMYEAHDALICIAEGAYVDQVAPRRRLTPQHY
FKSEAEMVALFADLPEAVENTVEIARRCAFKAAKRPPILPRFADDEVEEL
RRQAKEGLAARLAVIPHAAPVEDYEARLSFELGIIEQMGFPGYFLIVADF
IKWGKANGIPVGPGRGSGAGSLVAYALTITDLDPLRYQLLFERFLNPERV
SMPDFDIDFCMDRREEVIRYVQEKYGRDKVGQIITFGALLSKAAVRDVGR
VLQMPYGQVDRLSKMIPVEGVKPVSIQKALADEPRLREAAKTEEVVKRLL
DYGMQIEGLLRNASTHAAGVVIGDRPLDELVPLYQDPRSDMPATQFNMKW
VEAAGLVKFDFLGLKTLTVIQNAIDLIRGTGRPLHMAADGRVLYDPPPGA
ENDIGHIPLEDKATYELYAQAKTVAVFQVESSGMMDALRRMKPTCIEDIV
ALVALYRPGPMENIPVYCEVKHGLRDLESLHPTIDPILKETQGIIVYQEQ
VMQIAQVMGGYTLGGADLLRRAMGKKIAEEMAKERPKFIEGAKKTHGIDA
KKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANHPVEFMAAVMN
CDIHLTDKLAVYKREVDKLGIRTVAPCVNASLATFTVRDGAVVYALGALK
NVGVEAMRLIVEARGDRPFATLFDMARRVELKRIGKRPLEMLARAGAFDA
LDRNRARVFEALDALVAYSAAIHEALNSSQVSLFGEAGADIPEPRLPSRD
DWLPVERLAQEHQAIGFYLSGHPLDDYMGALKRRNVTTLAALTDLAQRGP
MVAKLAGAVSSRQEKKSAKGNRFAFVQLSDPTGLYECTVFSDVLEQARDL
LEPGGHVVLTVEATLEGDSLKLLARGVSPIDAVAADAGAMSLRVHLDRAE
AAASVAALLARAQGRARAPVRICVRDPSGGQEIDIELGQDFAVSPQIRSA
LRAVPGVEMVEEI
>RSP_3589 ihfB, Integration host factor beta-subunit
MIRSELIQKIADENPHLTQRHVERIVNTVFEEIIEALARGDRVELRGFGA
FSVKARDARVGRNPRTGEAVEVEDKKVPFFKTGKLLRDRLNAK
>RSP_3423 xthA1, Probable exodeoxyribonuclease III
MRIATFNVNGVNGRLPVLLRWLEEARPDVVCLQELKAASARFPAAALEAA
GYGAVWHGQKSWNGVAILARGAEPVQTRQDLPGVQDGESRYIEAAVEGVL
VGCLYLPNGNPAPGPKFAAKLAWFDHLLNHAEEVLRHDVPVVLAGDFNVM
PTDLDVHRPERWREDALCRPEVRAAFARLLAQGWTDSIRHLYPEDRIYTF
WDYLRNAWERDAGLRLDHLLLSPSLLTRLKGAGVDRHVRGWEKASDHAPV
WIAID