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# Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

>gid:896180  HCM1.103  putative DNA helicase
MTKRLTWEQKSIVNHDTGHALVKAVPGSGKTTTLVKRVERLVKTGTDPRS
ILILMYNKSAQVSFTEKLKTALMSSVIPEIRTFHSLALKIVGYGERQQII
KKKDLITPSDYRYEQLVKQAYRYGFDHEANYIDPNEIENFELFIARCRAA
AVTPVDAANDPTFSNIKRGFIHAYGRYCELLEENSLRTFDDCLIEAVALL
RNDSSLGAHFKHIIVDEYQDVNLIQHDMTRLLSKSDTSVMAVGDVNQCIY
EWRGARPDFIGGLFERHYPNTKVFQLSCTFRFGHELSLMANSVIRRNSTK
LTKLCVSHPSTPKTEVRLHFDNCLSKVLSNLSVSSGTQAILSRTKANLAE
AEIVLRLCGLPYRYLNGSSALHTRTEIGILVVGVLLSVYGDLRLLENHPN
KQAIVYGFLKEAGFSWQKGQFKAALSGLMAPHADLWSALGQLFEGAQYQK
DRLGRLATICQKDGEETPAIDVLRRLSMEGFIDSVGSEGVTRTGSNDQQR
GVVRIGELLDSSKIDSRTFLNLILNPGEAATDCDPFILSTLHGSKGLEWD
NVILIGLNEQEFPGGKPDDVYSVRTSMNTPPAEEEIEEERRLFYVGITRT
KQQLNLVVPLDEGLARWLKNRWDSTPKKSPIATRFVYEAGWTACAVTSDA
IYNSTVEKQKADFSKFHQWYLRDLQRLKV
>gid:896229  HCM1.134c  putative recombinase
MNSKPVTRQFEDSDLHQELVTFEVPNNDLKELIFYFSHMKYNTAKTYLQW
LRSWNEWYQANAGKEGNEAWPASSLPVTEPPLLAYLDYLQGSLSHSSIKG
CLHALNSIHRKALDRPGIITSKVKSILASLEQAEAREQKVTRQATPFLVS
DLKALIKAHGTTQSVRKLRDLCIIWTGFETLLRSAELRRIRMQDLVLNEQ
TGSFTLTVYRTKSTVSTLLTYHLTPHLTATLIRLMDMVKRDQQSHPKDYL
FQAVNYQDSGYMPPGWGLRSKGNEINTLLKNHNMPYRPTRPPIGKNGKPI
IVDDEGMLSKNTLLRAFEAFWDELHPQEAGTRCWTGHSVRVGGAIELANA
GYTHLQIMEMGNWSNPEMVSRYIRNIDAGKKAMTKFMREALDE
>gid:896301  HCM1.162c  putative transposase
MTDFKWRHFQGDVILWAVRWYCRYPISYRDLEEMLAERGISVDHTTIYRW
VQCYAPEMEKRLRWFWRRGFDPSWRLDETYVKVRGKWTYLYRAVDKRGDT
IDFYLSPTRSAKAAKRFLGKALRGLKHWEKPATLNTDKAPSYGAAITELK
REGKLDRETAHRQVKYLNNVIEADHGKLKILIKPVRGFKSIPTAYATIKG
FEVMRALRKGQARPWCLQPGIRGEVRLVERAFGIGPSALTEAMGMLNHHF
AAAA
>gid:896349  HCM1.187c  putative DNA modification methylase
MYNDRTEPAITALLNDETPSSIHKLLVQVASIYDVKDLAAQLNAATGSDW
SRASLIRQIKGSVNECRITQEEYHYLRSLLPSRPADYDQKFFRFIDLFAG
IGGLRSGFDAIGGKCVFTSEWNQFSRRTYSANWYCDETEHYFNSDIRDIT
LSNLPDVSDDQAYASIDASIPDHDVLLAGFPCQPFSIAGVSKKNSLGRKH
GFECDTQGTLFFDVARIIRAKQPAIFVLENVKNLKSHDKGNTFRIIMKAL
DELGYDVADCDAHGSKDPKIIDGKNFRPQHRERIVLVGFRRDLKLHDGFS
LSGVSALYPSRRPTLGELLDAEVDSRYILSPKLWEYLYNYAKKHQAKGNG
FGFGLVNPLDKSVVCRTLSARYYRDGSEILLDRGWDHSIGEKDFNDPVNM
ARRPRRLTPRECARLMGFEQPGKVTFRIPVSDTQAYRQFGNSVIVDVFAA
VASLLRSRIEIAVAARLKGEFEAAS
>gid:896356  HCM1.188  putative nuclease
MTLLKKLLLPTLIVLFPAATLAAQSSFEAKVVKIIDGDTITALDGQNTSI
KIRLYGIDAPESKQAFGQKSKQALSAAIAAQNITVIDHGPDIYGRMLGTI
WLDGYDINASMVDSGYAWVYRFDGNAIVPNYLKFEASAQKAVKGLWVDPN
PVAPWEWRQQNQKPQKTKSRG
>gid:896365  HCM1.194  transposase
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPT
KARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSD
IREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASIL
PSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPI
SNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCH
HPSPKIYSASAKEPWILATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKS
PAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA
NTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNLFTHGYVLG
KL
>gid:896375  HCM1.201  putative transposase
MAIHDAGMFTVKEINRLKILQDVVERNLRPGQAAEMLGITPRHCSRLLKR
YRQSGPLGMNNQSRGRTGNRLLPTSLTDQALSIIRERYRDFGPTLAREKL
EEVHGLVLGKETIRRLMIKAGLWIPRRQRAPKIHQPRYRRPCTGELIQID
GCDHHWFENRGRPCTALVYVDDATSRLMHLLFVKSESTFSYFEATRGYIE
KYGKPMILYSDKASVFRVNNKHATTGPGETQFARAMRCLNITPLCAETSQ
AKGRVERAHLTLQDRLVKELRLKGISTIEAANAFAEEYMADYNRRFAKAP
LHDFNAHRPLALDDDLDAEFTWREPRRVSKSLTVQYDKMLYLIEDSEYSR
RAIGKYIDVWHYPDGHKELRLNGVLLPYSTYDRLSEVDPVAIVDNKRLGH
VLDVARQVQKKRDNNRSQSLPSGDEPSRRRHAPGINKSQRSLNEDDLLEA
IIKLQGSSEAIFGKR
>gid:896392  HCM1.209c  putative transposase
MENIALIGIDLGKNSFHIHCQDRRGKAVYRKKFTRPKLIEFLATCPATTI
AMEACGGSHFMARKLEELGHSPKLISPQFVRPFVKSNKNDFVDAEAICEA
ASRPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGIS
VPRGAAVISRLSTILEDNSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLK
RKLDEDEVGQRLLSIPCVGTLTASTISTEIGDGKQYASSRDFAAATGLVP
RQYSTGGRTTLLGISKRGNKKIRTLLVQCARVFIQKLEHQSGKLADWVRD
LLCRKSNFVVTCALANKLARIAWALTARQQTYVA
>gid:896404  HCM1.213c  putative transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRW
VQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGR
TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALL
KREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIK
GIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>gid:896419  HCM1.219  putative transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRW
VQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGR
TVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALL
KREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIK
GIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>gid:896463  HCM1.236  putative transposase
MENIALIGIDLGKNSFHIHCQDHRGKAVYRKKFTRPKLIEFLATCPATTI
AMEACGGSHFMARKLAELGHFPKLISPQFVRPFVKSNKNDFVDAEAICEA
ASRPSMRFVQPRTESQQAMRALHRVRESLVQDKVKTTNQMHAFLLEFGIS
VPRGAAVISRLSTLLEDSSLPLYLSQLLLKLQQHYHYLVEQIKDLESQLK
RKLDEDEVGQRLLSIPCVGTLTASTISTEIGDGKQYASSRDFAAATGLVP
RQYSTGGRTTLLGISKRGNKKIRTLLVQCARVFIQKLEHQSGKLADWVRE
LLCRKSNFVVTCALANKLARIAWALTARQQTYEA
>gid:896489  HCM1.249c  transposase
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPT
KARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSD
IREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASIL
PSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPI
SNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCH
HPSPKIYSASAKEPWILATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKS
PAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA
NTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNLFTHGYVLG
KL
>gid:896074  HCM1.57c  hypothetical protein
MSANLLAFCSRLLSWYQINPSKRTGAMSAVESDSLPMGAPGSSLVAYMPH
TGLLINDDNFLPEMREELDVINRQVESYNDELSLLRSMSAQFLKCGNQKL
YSYLSGYNHLISEADASYAENALRSEYWKRVMALTDVLSVMSDEKKKEWD
KQFTADRYHLPPQEIPDFTLDAVVTTVVALLNDRHQFIKDRVYAVFQSLS
RQHKTNKAFGFSTRMITSGVCEGVKDKWVKLKVEFKESGLMPLSELRVIC
SYFRGETVKPVYDTKKMVENMVGHVGFRNWISLDGNSIRFRVYKNGSMHI
DVHPDIAERLNNILAAIVPLALPAERVAHTKATLQEFPALKRCIDFHSRM
QLAELDFTQNEKEWSSWTSLGYAGENADKTRQVNADVLRFLGARVTSYHV
TFDYDPTEVMRFIGHMGAMPDIKSHQFYPSSARLSEYVASIIAAGEGERL
LEPNIGHGDLLQCFPKSVNVTGIELDTLNCLVSRAKGYETTEADFLAWSA
ANQIQKFDCVVMNPPFADNRAKLHLLAAASHLVPGGRLAAVLPLSLQGID
NLLGEGFRTEWMDTFDNEFDNTAVSVRVLYAERF
>gid:896079  HCM1.59  putative DNA modification methylase
MRKHTPIIKWAGGKTKLMPFLSKHFPHDKSRRWVEPFIGGGAVFLNMFAT
EALLADSNPDLINLYRNIQRNKPAFIREVQLLAERHFEEEDYYVLRNTFN
STSFDDAPLQRAAIFYAMNRLGYNGLCRYNLKRKFSVPWGKRYQFSLDIQ
KVDYLSFRLSSVELKTADFGQTLEFAGGGDQIYCDPPYDKISKTSFVSYD
GIPFDKSAHVKLADMLVDANRKGASVAISNSMTPFTLELYEERGFDIHTH
NAYRSVGSQSKSRKKEIEILAVLR
>gid:895982  insA  putative IS1 transposase
MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP
GTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR
>gid:896468  insA  putative IS1 transposase
MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP
GTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
>gid:896257  insA  putative IS1 transposase
MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP
GTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
>gid:896234  insA  putative IS1 transposase
MASVSISRPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP
GTHQKIIDMAINGVGCRATARIMGVGLNTILRHLKNSGRSR
>gid:896380  insA  putative IS1 transposase
MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP
GTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR
>gid:895981  insB  putative IS1 transposase
MPGNRPHYGRWPQHDFTSFKKLRPQSVTSRIQPGSDVIVCAKSRQRWLFY
AYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLK
GKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYL
NIKHYQ
>gid:896236  insB  putative IS1 transposase
MPGNCPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV
GAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMT
DGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV
ELHDKVIGHYLNIKHYQ
>gid:896379  insB  putative IS1 transposase
MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV
GAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMT
DGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV
ELHDKVIGHYLNIKHYQ
>gid:896259  insB  putative IS1 transposase
MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV
GAKSRQLWLFYAYDRIRRTVVAHVFGERTLATLERLPGLLSAFEVVVWMT
DDWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV
ELHDKVIGHYLTIKHYQ
>gid:896467  insB  putative IS1 transposase
MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV
GAKSRQRWLFYAYDRLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMT
DGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV
ELHDKVIGHYLNIKHYQ
>gid:896309  int  putative integrase
MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGV
RHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPW
LQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEG
LQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWL
KDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRH
HMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDL
LGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
>gid:896497  mucB  putative DNA-repair modulator
MYMHVDINGAYAAFECAMDPKLAKSPLIIASNNDATIIAMNRLAKNTGLK
RGMPIFKCRDLIEQHHIAVRSSNFTLYEDYSNRFHETLEGFAEDTDRYSV
DESFMLLKNMDKIVDFEEYGCLIRRTLLHNLSLTCGIGVSTTKTLAKLCT
YASKRWAATGGVVVLTDPFRIKKLLSLISTREIWGIGRKISERLTAYGII
TACDFYDSDVRFLRKAFGVEMERTWRELHGESCFRLHESPPVRQQIIVSR
SFGQRLNTFSKMHEAVSFFTGRAAEQLRNDGSWTRQITVFIQSSPFARAE
ARYSSCGIEPLTATQDTRDLVSAAGAILTRIYKPGIDYAKAGVMLSSMTD
GTEQLSLFDERPARRGSEALMKVMDRFNKEHRGSLFLACEGIHQDFRGKQ
AMLSPRYTTRWNELLVVKA
>gid:896244  rep  putative replication initiation protein
MAEIAVINHKKRKNSPRIVQSNELTEAAYSLSRDQKRLLYLFVHQIRKSD
GSLQEHDGICEIHVAKYAETFGLTSAEASKDIRQALKGFAGKEVVFYRPE
EDAGDEKGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFR
LSETKEITNPYAMRLYESLCQYRKPDGSGVVSLKIDWIMERYQLPQSYQR
MPDFRRRFLKASVDEINSRTPMRLSYIEKKKGRQTTHIVFSFRDITSMTI
E
>gid:896317  tnpA  transposase
MPRRSILSATERESLLALPDAKDELIRHYTFNETDLSVIRQRRGAANRLG
FAVQLCYLRFPGTFLGVDEPPFPPLLRMVAAQLKMPVESWSEYGQREQTR
REHLVELQTVFGFKPFTMSHYRQAVHTLTELALQTDKGIVLASALVENLR
RQSIILPAMNAIERASAEAITRANRRIYAALTDSLLSPHRQRLDELLKRK
DGSKVTWLAWLRQSPAKPNSRHMLEHIERLKSWQALDLPAGIERQVHQNR
LLKIAREGGQMTPADLAKFEVQRRYATLVALAIEGMATVTDEIIDLHDRI
IGKLFNAAKNKHQQQFQASGKAINDKVRMYGRIGQALIEAKQSGSDPFAA
IEAVMPWDTFAASVTEAQTLARPADFDFLHHIGESYATLRRYAPQFLGVL
KLRAAPAAKGVLDAIDMLRGMNSDSARKVPADAPTAFIKPRWAKLVLTDD
GIDRRYYELCALSELKNALRSGDVWVQGSRQFKDFDEYLVPVEKFATLKL
ASELPLAVATDCDQYLHDRLELLEAQLATVNRMAAANDLPDAIITTASGL
KITPLDAAVPDAAQAMIDQTAMLLPHLKITELLMEVDEWTGFTRHFTHLK
TSDTAKDKTLLLTTILADAINLGLTKMAESCPGTTYAKLSWLQAWHIRDE
TYSTALAELVNAQFRQPFAGNWGDGTTSSSDGQNFRTGSKAESTGHINPK
YGSSPGRTFYTHISDQYAPFSAKVVNVGIRDSTYVLDGLLYHESDLRIEE
HYTDTAGFTDHVFGLMHLLGFRFAPRIRDLGETKLFIPKGDAAYDALKPM
ISSDRLNIKQIRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAV
ALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFYRLG
EIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERATSALRGNGTALDDTL
LQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA
>gid:896312  tnpR  resolvase
MQGQRIGYVRVSSFDQNPERQLEGVQVARVFTDKASGKDTQRPELERLLA
FVREGDTVVVHSMDRLARNLDDLRRIVQGLTQRGVRMEFVKEGLKFTGED
SPMANLMLSVMGAFAEFERALIRERQREGIVLAKQRGAYRGRKKSLNSEQ
IAELKRRVAAGDQKTLVARDFGISRETLYQYLRED
>gid:896186  trhI  putative DNA helicase
MSLVKKNPSNLNRIIKGTKYSEAFMGKPTDEQRVIIENANANNMVIAAPG
SGKSFTMIEAVISILRQFPYAKVGMVTFTRAATNSLAEKLKRRLSKKDQD
RVLVNTFHGFIRMQLDMVNWKGKMLISSAQRSVIHRALKESGAPFRYPDA
EFAIDAIGREMDTDIISVRHTRQQIHLFNTYQAICQKDHVADLNALSRFV
VGQMYSGKMQPLNLTHLVVDEVQDTDSIQYAWISLHTRAGVNTSIVGDDD
QAIYSFRASGGVKIFQQFEKQFRPNIFYLNTCFRCEPEILKVAGALIEKN
VYRYAKDLRSAKGGGGKVHFRSYVDMDEQIQGILNLINQDPIGWAILSRG
NAHLDQLESLIEQPVLRYGGKSFWDEKETSDVLHLMAFFRHSNDVRLMKR
VLALFGENEEVLDQTALSMKGRKVTFGELNIPNESSLETRTLHSNFTRFT
QETREKVEIEKRFANLIKWMELSSIKMRTQKGSPSLSRIALDTCKQWAEK
TGWQNMINRAAAMCLGPKKKDEEYTPDKVVLSTLHGSKGLEWKNVIIMSC
NADQIPSKRSVGQEAIEEERRLLFVGFTRAEQQLHVMWYGDPSFFLSECA
EDKLKEAAKSRTESPLTE