Gene list
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COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: R27
Number of genes found: 16
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# Salmonella typhi >gid:892758 R0041 putative DNA adenine methylase (dam) MPFLSKHFPHDKSRRWVEPFIGGGAVFLNMFATEALLADSNPDLINLYRN IQRNKPAFIREVQLLAERHFEEEDYYVLRNTFNSTSFDDAPLQRAAIFYA MNRLGYNGLCRYNLKRKFSVPWGKRYQFSLDIQKVDYLSFRLSSVELKTA DFGQTLEFAGGGDQIYCDPPYDKISKTSFVSYDGIPFDKSAHVKLADMLV DANRKGASVAISNSMTPFTLELYEERGFDIHTHNAYRSVGSQSKSRKKEI EILAVLR >gid:892763 R0046 IS30 transposase MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPH ERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRG RRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISG WLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRR HTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATL VDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELAR HLEFTVSTGVKVYFCDPQSPWQRGTNENTNGLIRQYFPKKTCLAQYTQHE LDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD >gid:892802 R0085 IS10 transposase MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPT KARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSD IREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASIL PSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPI SNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCH HPSPKIYSASAKEPWILATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKS PAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQA NTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALG KL >gid:892866 R0148 putative transposase MTALAAEFFTLDEVNRLKIIPDVIDRRLTTQMAAQRLGISDRQCRRLLAR YREDGPLGMTSRRRGKSSNNQLPQGLAAYALNIIRERYNDFGPTLACEKL AEVHGVHISKETVRKLMTQASLWVPRKQRAPKIQQPRYRRACAGELIQID GCDHHWFENRGPKCTALVYVDDATSRLMQLRFVKSESTFTYFEATRGYIE MHGKPLALYSDKASVFRINNKNATGGEGETQFGRAMHELNIQTICAETSA AKGRVERAHLTLQDRLVKELRLQGISTMESANAFAEEFMNDYNRRFSKAP RQEFDVHRELDVDDDLDMVFTWREARRVSKSLTVQYDKVLYLIEDNEFSR RAIGKYIDVWHYPDGHKELRLNGVSLPYSTYDKLSEIDQGAIVDNKRLGR ALEMAQLVQAERDNNRSQSVPSGDGPSRRRKAPTTKKSQRSLDQDDMFNA LVKLQTRAEEIFGERNQK >gid:892872 R0154 EcoRII cytosine methylase MYSARNEPAITALLNDETHSSIHKLLVQVASIYDVKDLAAQLNAATGSDW SRASLIRQIKGSVNECRITQEEYHYLRSLLPSRPADYDQKFFRFIDLFAG IGGLRSGFDAIGGKCVFTSEWNQFSRRTYSANWYCEDTEHHFNSDIRDIT LSNLPDVSEDQAYASIAASIPDHDVLLAGFPCQPFSIAGVSKKNSLGRKH GFECDTQGTLFFDVARIIRAKQPAIFVLENVKNLKSHDKGNTFRIIMKAL DELGYDVADCDAHGSKDPKIIDGKNFRPQHRERIVLVGFRRDLKLHDGFS LSGVSALYPSRRPTLGELLDAEVDSRYILSPKLWEYLYNYAKKHQAKGNG FGFGLVNPLDKSVVCRTLSARYYRDGSEILLDRGWDHSIGEKDFNDPVNM ARRPRRLTPRECARLMGFEQPGKVTFRIPVSDTQAYRQFGNSVIVDVFAA VASLLRSRIEIAVAARLKGEFEAAS >gid:892902 R0183 orf; hypothetical protein MNSKPVTRQFEDSDLHQELVTFEVPNNDLKELIFYFSHMKYNTAKTYLQW LRSWNEWYQANAGKEGNEAWPASSLPVTEPPLLAYLDYLQGSLSHSSIKG CLHALNSIHRKALDRPGIITSKVKSILASLEQAEAREQKVTRQATPFLVS DLKALIKAHGTTQSVRKLRDLCIIWTGFETLLRSAELRRIRMQDLVLNEQ TGSFTLTVYRTKSTVSTLLTYHLTPHLTATLIRLMDMVKRDQQSHPKDYL FQAVNYQDSGYMPPGWGLRSKGNEINTLLKNHNMPYRPTRPPIGKNGKPI IVDDEGMLSKNTLLRAFEAFWDELHPQEAGTRCWTGHSVRVGGAIELANA GYTHLQIMEMGNWSNPEMVSRYIRNIDAGKKAMTKFMREALDE >gid:892915 R0195 IS2 hypothetical orf MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDT DVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNA LLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFAL DCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNG SCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPK PDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE I >gid:892916 R0197 IS2 hypothetical orf MIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWR KQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEA VEYGRAKKWIAHAPLLPGDGE >gid:892896 insA IS1 transposase MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP GTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSGRSR >gid:892813 insA IS1 transposase MASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQP GTHQKIIDMAMNGVGCRATARIMGVGLNTILRHLKNSGRSR >gid:892895 insB IS1 transposase MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV GAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLPGLLSAFEVVVWMT DDWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV ELHDKVIGHYLTIKHYQ >gid:892899 insB IS1 transposase MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYV GAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLERLPGLLSAFEVVVWMT DDWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSV ELHDKVIGHYLNIKHYQ >gid:892854 mucB putative UV protection protein MDPKLAKSPLIIASNNDATIIAMNRLAKNTGLKRGMPIFKCRDLIEQHHI AVRSSNFTLYEDYSNRFHETLEGFAEDTDRYSVDESFMLLKNMDKIVDFE EYGCLIRRTLLHNLSLTCGIGVSTTKTLAKLCTYASKRWAATGGVVVLTD PFRIKKLLSLISTREIWGIGRKISERLAAYGIITACDFYDSDVRFLRKAF GVEMERTWRELHGESCFRLHESPPVRQQIIVSRSFGQRLNTFSKMHEAVS FFTGRAAEQLRNDGSWTRQITVFIQSSPFARAETRYSSCGIEPLTATQDT RDLVSAAGAILTRIYKPGIDYAKAGVMLSSMTDGTEQLSLFDERPARRGS EALMKVMDRFNKEHRGSLFLACEGIHQDFRGKQAMLSPRYTTRWNELLVV KA >gid:892871 parB putative partition protein MTLLKKLLLPTLIVLFPAAVLAGQSSFEAKVVKIIDGDTITALDGQNTSI KIRMYGIDAPESKQAFGQKAKQALSSAIAAQNITVIDHGPDIYGRMLGTI WLDGYDINASMVDSGYAWVYRFDGNAIVPNYLKFEASAQKAVKGLWVDPN PVAPWEWRQQNQKPQKTKSRG >gid:892897 repFIB replication protein MAEIAVINHKKRKNSPRIVQSNELTEAAYSLSRDQKRLLYLFVHQIRKSD GSLQEHDGICEIHVAKYAETFGLTSAEASKDIRQALKGFAGKEVVFYRPE EDAGDEKGYESFPWFIKRAHSPSRGLYSVHINPYLIPFFIGLQNRFTQFR LSETKEITNPYAMRLYESLCQYRKPDGSGVVSLKIDWIMERYQLPQSYQR MPDFRRRFLKASVDEINSRTPMRLSYIEKKKGRQTTHIVFSFRDITSMTI E >gid:892721 trhI putative DNA helicase MGKPTDEQRVIIENANANNMVIAAPGSGKSFTMIEAVISILRQFPYAKVG MVTFTRAATNSLAEKLKRRLSKKDQDRVLVNTFHGFIRMQLDMVNWKGKM LISSAQRSVIHRALKESGAPFRYPDAEFAIDAIGREMDTDIISVRHTRQQ IHLFNTYQAICQKDHVADLNALSRFVVGQMYSGKMQPLNLTHLVVDEVQD TDSIQYAWISLHTRAGVNTSIVGDDDQAIYSFRASGGVKIFQQFEKQFRP NIFYLNTCFRCEPEILKVAGALIEKNVYRYAKDLRSAKGGGGKVHFRSYV DMDEQIQGILNLINQDPIGWAILSRGNAHLDQLESLIEQPVLRYGGKSFW DEKETSDVLHLMAFFRHSNDVRLMKRVLALFGENEEVLDQTALSMKGRKV TFGELNIPNESSLETRTLHSNFTRFTQETREKVEIEKRFANLIKWMELSS IKMRTQKGSPSLSRIALDTCKQWAEKTGWQNMINRAAAMCLGPKKKDEEY TPDKVVLSTLHGSKGLEWKNVIIMSCNADQIPSKRSVGQEAIEEERRLLF VGFTRAEQQLHVMWYGDPSFFLSECAEDKLKEAAKSRTESPLTE