Gene list
Applied filters:
COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: pPBPR1
Number of genes found: 9
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Photobacterium profundum, ss9 >PBPRC0044 putative helicase[Photobacterium profundum SS9] MIDASVWEPKDGLKFDDKSLGIIKCDNNISIMAGPGAGKTEILAQKACFI LETELCAWPYNVLSISRKRESASNIKNRVSLRCGNVLSERFHSFTIEAFT KSIVDRFMHILPKHEQPNEDYKLVFNSRDSNFRDKLTFDQLTITALKIVN SSSTLMSSIRATYKYVFIDEFQDLNGHQYDFVKSIFCGSQSVVTVVGDTK QAVMKFANALPDGFIKFKQDFKADLKIIYTNFRAAPELKQFIDCIGNEWW PINTESVESNIDSVALDKGDYSLLNFNDEEHEVKQLSLKIKKWISEDGIK PKEIAILFRINTNNNYSKNLNIALLDLGVLSINESNIQDYLSEPLGKVLV SLLCLLTRPRDIKAWECLRDSYLYCSSSNSLHNDFELTRILKLIGDTPFY GDGDAKTFDSILDVTIEIMNEFFYENLKKTWTQYRQGTLMDETFHGVLEE LKEARNISSSWSGAVDLISGVGAVRMMTIHKSKGLEFEAVVLLGLEDYSY FRYGMTQKKLDEERSTVFVALSRAKSKLLISSAMSRKHTGPSKFMHVNSI INDLTKFGMNRSRVDKLDTLKI >PBPRC0055 putative transposase [Photobacterium profundum SS9] MNIPLNYVRSYVAINKQGETLDFYFSHKRNKEAAYQFLKRCLRYYDVDNQ PKTLNTDKHSSYANAIARLKKEGRLRADVEQRQVKCLNNGIESDHAPIKK LVVATGGFKIRKRAWSTIQGFESLRMLNKGQFDFWLRHDERKTLVRERSA FMNRLFNVEVVYQ >PBPRC0022 putative DNA helicase (TraI) [Photobacterium profundum SS9] MLSISPLSQSAGDAASYYLTEEKHHDLPDVSLEVDTQSPEKETNYYLKEH SDEPNTQWFGKIAEQEGMLGKPVEEKQLEAVLSGTLNGTTVHGKRENHRN GFDFTFSAPKSVSTLALVGGDKRLITAHDDAVKFTLSHMEKDAAQAKYTD EQGKTAFANTGNLLFAMVRHKTSREDEPQMHTHALTSNMTKDSEDTLRAL ASCFKQQGGVINGTNERIYNHQLYYGMLYQSYLSKQVESLGYGIHSVGKG QFEIEGVPEGYLQSQSTRSQQIDEHARSVGMDSAAARDMAAKGTRKGKSY ASDATLMEKWQGDAKASGFDIQAFVASSYARANSEAPSQSLKPAAMDAAH RAINHQSQTRNQLGYEKLIESAATQFTQGEKLDVIDIKLAVDTLILQGHL IGLNDSQSLFTTQTMIDNEQKLIASTQGQKRHLRTLVNTQSLEQQGLSAD NQDKINTLFASRKQTNIVNVFGQSQQIASALLHVGTESGQRIHIITPDTL SKQTTGAKVPREAFTATQWVKNLFRPEHTHTVQRLLHDKDTPYSNRDLFV VEAANKLGVNEVQGLIDKAKVSNSKLIFLNHTHARQGMKAGRVMDTLKKG NVTEHSWVDTKDNSAQLFVHEKNDGERIDAIARAYSDLTDTSQVQVLGTT QKDVQALNTTIRHTLQQRGDINRHGVTVRTLNPVFLSDAQREVVSHYKKG MVLSEWQKVHGRNTKQDFTVTAINRKNNLLTLKDSKGKTQDINPNTREAK ARQFSISRSDSIEIARGDKLRVNGNHFASKLTQHQTLTVSSSNALFINLK DNDGKYHLLATNQLNDAPLSYNFAQPLSKADDTKAHTLIGMKSYAASKEL LHDLNHGQASRLDVFTDSGEKLDKHLEKSTIQPSAIHRVMQAHGDPEKFI NSQTFDVLRQDVNATLHTLKDKALDKGLIESAVQYAIGTVSEKEAGFSQK QLVIEAIKYAFEEKGQAIKETEIVAHLKQAENNQQLLSAEYHDGTRWTTH AAIATETRILERLAAGKNTVTPLATPAQANAFLDKHPRFTDGQKSAVHLI TTTADRFVAVQGLAGVGKSTMLESGIDLVKGIQAMNPEQTTFIGLAPTHA AVNELKAKGVQSQTAQSLLTDFLSEKHTPGQFRNTVFLLDESSMTSNQQI DQFTELVNITGARAVKLGDIYQLTSQEAGKPFELAITNNIIDSVTMKDMK RQQNDTLLGAVHNIVDRQGESALEKLKQQAPLQDYQPLPATKNEQQADDQ EQASINQSHNVISTYHNTGNPKKDQETATLALATTVALEYLSRTPQSREN TLIIAYTNQERDDISHIIRQGLQQQKHLSAQQYNVPRLRSVGATNIEMAT MMPYKSGLILRTGKDNYAAITDVDRQHGVVTVADMKTGEERPFFPKNHDH TFTQLWSQSEQPLAKEDSIMLRQTDKSRQWQGNKVYRVTDINNGKIQLES KDRHTLSLSTTQMKDAHWDYAYTRTADMAQGSTYENVITTIKGKGILTNI RRAYIDITRASHHVKLITDNTEKTMLSWVNNETNKPSALETRDKYYPEHK ALFNDRPIPKDNPVYQDINGRLDIKTMGKVINQQLPAYTESLATQLLGQP DTTKSGRDTLTFQQPKGELKITLTGQYRGHFKNWGTGENGTLISLIMNKE GLSYKAALFKADTLLSEPDKHQLTINPQHEQLKATVPLKQSQLEARAQQY FNDGMPVTNTLAQTYLDTNPNRPFKDNDSIRYHPRVYSSETRSTHPALIA KLETPDNQIKGISVTYLNDATGDISDLKINKRVLGTKSGNHIPINEGIQA DYSILAVGIENALLINDNNPTNTDIIAVTNNNDCRTVNTDNLRENIIIVL NQENTEISQRLIDDITSKLERDGKHATIIEPNDINNTPGSTLSDHIKTAI NDITIKDNYIPDAITTLTNDINNAITPYINTPLTETEKSTVRDIAINEHI EKQTNMILLEKETTLDTRTTQLEIDRELTR >PBPRC0025 putative antirestriction protein [Photobacterium profundum SS9] MTHSTVINSTITKQHQATSVSPLEQSGSNKNVSSKRKPRRVAKVAKDMYQ IVTDRIIQSLEKGVKPWVCPWDRTQECTLLPMNFKTKHQYSGVNILLLWS EIVEKGYSSPYWLTYKQAAELGGNVIKGQKGTAIIFYKMLEKDNDKGEKD TIPMLKSFTVFNLDQIENIDKPSVTVSEARTVQGDFVTLDHVEAAMVETG ATISHLGVRAFYSPSHDAITLPTKDRFASSNDYYATAMHELTHWSGHKSR LDRDLKNSFGSKDYAFEELVAELGAAFCCADLSVFGEVQHEDYIAGWLKK LNDDKRFIFKAASLASKAHAFLLNK >PBPRC0053 putative transposase [Photobacterium profundum SS9] MEDAENQLPDLSRAIIADCYDHLLTLNQRIEDQENCFNMLVSRSHNAKKI MKVAGIGPITATAVIASIGKGEQFDKGRDFAAWLGLVPSQYSTGGKPRLG RITKRGDKYLRTLLVHGARAVIANLGAQPLV >PBPRC0052 Putative site-specific recombinase, resolvase family [Photobacterium profundum] MYIFGYLRASTNEQDAQRAKSSLKSFVEEKGRRVASWYWENVSGASLKRP ELMRLLDDAAPGDAILIEQVDRLSRLNDEDWITLKALIQEKNLKIISLDL PTSHTALSAHINDEFTNAMLRAINNMMLDMLAAIARKDYQDRRRRQKEGI EKAKNEGKFRGRQADLNKHEQIYKLRVINGLSIADTAKLADVSYRTVIRV AQSYKANEPE >PBPRC0034 conserved hypothetical protein [Photobacterium profundum SS9] MSFVPLKPIPIKDRNSMIFIGKGRIDVKDGAFVVIDEVNGERMHIPVGSV VCIMLEPGTRISHAAVKLAATTGTLLIWVGEAGVRLYSVGQPGGARSDKL LYQAKLALDETLRLKVVRKMFELRFGEPAPERRSVDQLRGIEGARVRKIY QMLAKQYGIEWHGRRYDPKDWEKGDVINQCISAATSCLYGVTEAAILAAG YAPAIGFLHSGKPLSFVYDIADVIKFETVVPVAFLVASKKPNTPDRQVRI ACREAFRKDRTLKRLIPLIEDILNAGEISPPIPYEDAQPPALPEPESIGD EGHRTG >PBPRC0059 putative transposase [Photobacterium profundum SS9] MTNPEFKWKHFAPEIILWCLRWYGSTPMSYANLSDMLAERGISVNRSTIY RWYIEYAPTLRKKLRRHQFIRTDSSWQLDETYVKVKGKWHYLYRAINKQG ETLDFYFSHKRNKEAAYQFLRRCLRYYDLDNQPKTLNTDKHSSYANAIAR LKKEGRLRADVEQRQVKYLNNGIESDHAPIKKLVVATGGFKIRKRAWSTI QGFESFRMLNKGQFDFWLRHDERETLVRERSAFMNRLFNVEVVYQ >PBPRC0029 putative Endonuclease I [Photobacterium profundum SS9] MSVFYTANVCGFQKKMEMARVQHYRLEGSPSFTSHINKVRKSIVKRILFI VGLLLAFNATAANLHIESFSKAKKTLEKNVYFDHRTTLYCGASFDTKKNI TPPPGFKSDKYVKRSKKVEWEHVVPAENFGRTFIEWRDGDTQCVNNKGKA YKGRRCANKASKEYRLMQSDLYNLFPAIGSVNAARSNYNFTMLPAEPADF GSCQVKIDNRKAEPPIAARGRIARTYLYMEQSYSRYRMSKSQRQLMAAWD KQFPVSAWECKRAERIEKLQGNVNNVLKTRCH