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Gene list

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COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: pYV

Number of genes found: 25

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# Yersinia pseudotuberculosis IP 32953, IP 32953

>pYV0091 putative transposase
MTEYQASERRGCRIMGISRSLLHYCPNTARDIPVVEVLQKLAHQYPAYGF
GLMFNKLRQSGLPWNVKRVYRVYRLLKLNFRRKGKKRLPNRHPQPLAIPL
KMNHCWSVDFMSDALPDGRRFRLFNVVEILTGKHWQLKLT
>pYV0095 putative transposase
MTTRHRHARPEVTALDQCWSMDFVADNLFNGHRVRALTIVDNFSRECLAL
EVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENR
VTMDFSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQE
YNHFRPHSSLNNLTPAEFARSHQKGPDL
>pYV0035 hypothetical protein
MVELCRLLKITRSVYSASLNLRVDVKRLQLRELHQQSRGAAGNRTLSLLM
RQSGYNVGRWLAGRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFK
PSEPNRVWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVC
RA
>pYV0046 putative transposase remnant
MVLQSWRKKWANLSCYFRYPTTIRKVIYMTNAIESVHRLFRKLTKTKGIF
PNENSLLKSLYLGLMNAQERWTMPIQSWNLALSQLAIYFEGRLDKVITL
>pYV0023 possible transposase remnant
MYRLYHLSSLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALATG
RRIKCLTCVDDYTKECLTVTVAFGISGVQVTRILDSIALFRGYPATIRTD
QGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEH
WFSDVSHARKTISEWRQDYNECRPHSTLNYQTPSEFAAAWRKGNSDSEGS
DITK
>pYV0009 hyothetical protein
MTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWIRQ
YKEEVSGVTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFP
IKSLR
>pYV0010 hypothetical protein
MGGMAAHWFTYQYAVPFCGRAKTLVTLSNAEGESVLISPQQNTAQDISLF
MPRELTVSQGDRVRFTRSDTDRGYVANSLWEVAGFTEDGAVRFRQGDQEK
IVDPQKATEDRHIDLAYTLTAYGVQGASERFVIALFGAEGGRKRMATLHL
FT
>pYV0034 putative transposase remnant
MQSMSRRGNCLDNSPMERVFRSLKSEWLPVGGYMDVHHAVRDIGEWIQSY
YNTPPSAQWWITAL
>pYV0001 ypkA; putative targeted effector protein kinase
MKSVKIMGTMPPSISLAKAHERISQHWQNPVGELNIGGKRYRIIDNQVLR
LNPHSGFSLFREGVGKIFSGKMFNFSIARNLTDTLHAAQKTTSQELRSDI
PNALSNLFGAKPQTELPLGWKGEPLSGAPDLEGMRVAETDKFAEGESHIS
IIETKDKQRLVAKIERSIAEGHLFAELEAYKHIYKTAGKHPNLANVHGMA
VVPYGNRKEEALLMDEVDGWRCSDTLRTLADSWKQGKINSEAYWGTIKFI
AHRLLDVTNHLAKAGVVHNDIKPGNVVFDRASGEPVVIDLGLHSRSGEQP
KGFTESFKAPELGVGNLGASEKSDVFLVVSTLLHCIEGFEKNPEIKPNQG
LRFITSEPAHVMDENGYPIHRPGIAGVETAYTRFITDILGVSADSRPDSN
EARLHEFLSDGTIDEESAKQILKDTLTGEMSPLSTDVRRITPKKLRELSD
LLRTHLSSAATKQLDMGGVLSDLDTMLVALDKAEREGGVDKDQLKSFNSL
ILKTYRVIEDYVKGREGDTKNSSTEVSPYHRSNFMLSIVEPSLQRIQKHL
DQTHSFSDIGSLVRAHKHLETLLEVLVTLSQQGQPVSSETYGFLNRLAEA
KITLSQQLNTLQQQQESAKAQLSILINRSGSWADVARQSLQRFDSTRPVV
KFGTEQYTAIHRQMMAAHAAITLQEVSEFTDDMRNFTVDSIPLLIQLGRS
SLMDEHLVEQREKLRELTTIAERLNRLEREWM
>pYV0021 putative transposase
MHELEALLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRH
QRGMESRLKQARLPWVKTLEQFDFTFQPGIDRKVVRELAGLAFVERCENV
ILLGPPGVGKTHLAVALGVKAADAGHRVLFMPLYEDITNIGVY
>pYV0008 possible transposase remnant
MMDIHIAPYRQPFTFQASVYSRRIVGSAISSSPDAELVCRAWRNALETRP
REKRLLFHSDQGGQYRSKKYRQLLWRNGVMQSMSRRGNCLDNSPMERVKV
NHQCQVAPATIDFDIADISTPHTIGLRRLKLPFQ
>pYV0090 putative transposase
MKKARFTETQILRVLKEVEGGRHVKDVCRENGGSEASYYNWKSKYGGMES
SDIKRMKEREEENRRLKQMYASLSLDHEILKDVVAKKL
>pYV0003 putative transposase remnant
MKRLLFHSDQGGQYRSKKSRQLLWRTGVMQSMSRRGNCLDNSPMERVFRS
LKSEWLPVGGYMDVHHAVRDIGEWGYKVITTHPHRHNGGLPPCEYEEQGK
KATKVS
>pYV0092 putative transposase
MNIPVHRVVRILERLSTERGYPAFIRSDNGPEFIAAALVEWAEHHGVILD
MYLFRSLSEVRTLTEDWRTNARIAHWVICHPLSMQDKNWMEILTGGGTKN
RRDYIHTGKISIPSSAIRPISARPSTPRMPLSH
>pYV0017 putative resolvase
MRLFGYARVSTSQQSLDIQIKTLKDAGVKANRIFTDKASGSSADREGLDL
LRMKVEEGDVILVKKLDRLGRDTVDMIQLIKEFDAQGVSIQFIDDGISTD
GEMGKMVVTILSAVAQAERQRILERTNEGREEAKLKGVKFGRKRRINRKE
LLELHEQGMGATEIAKKMNIARSTIYKVINESQ
>pYV0019 putative transposase
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIR
YGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRHAR
PEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLALEVGQGLRGD
DVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDFSRPG
KPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPHSS
LNNLTPAEFARSHQKGPDL
>pYV0028 putative transposase remnant
MMTKHGISVEHSTLHSWVIRVVPLLHKAFCRYKCTVGRRWRMDEASKVSG
NTCTGRLILAVRLSIFC
>pYV0011 possible transposase remname
MRKWIRQYKEEVSGVTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAA
VLMSEFPIKSLR
>pYV0018 putative transposase
MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGV
TELRRLRQLEDENQRLKRLVADLSLDKEMLQDVIRKKF
>pYV0022 putative transposase
MLSREDFYMIKQMRQQGAYIIDIATQVGCSERTVRRYLKYPEPPARKTRH
KMVKLKPFMDYIDMRLAENVWNSEVILAEIKAMGYTGGRSMLRYYIQPKR
KMRPSKRTVRFETQPGYQLQHDWGEVELEVAGQRCKVNFAVNTLGFSRRF
HVFAAPKQDAEHTYESLVRAFRYFGGSVKTVLVDNQKAAVLKNNNGKVVF
NSGFLLLAEHYDFLPRACRPRRARTKGKVERMVKYLKDNVFVRYRRFDSF
THVNQQLEQWMADVADKRELRQFRQTPEQRFALEQEHLQPLPDTDFDTSY
FDIRHVSWDSYIEVGGNRYSVPEALCGQPVSIRISLDDELRSYSNEQQVA
SHRLCSASSGWQTVPEHHAPLWQQVSMVEHRPLSAYEELL
>pYV0036 hypothetical protein
MSRVVKYQRSTIEVARALELDPSQLRKWIHQYKEEVSGVTPDNPALIPEQ
REIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
>pYV0051 hypothetical protein
MKRYQFTDADSSWQLDEIYIRVNGKWFYLYRAINKHGTTLDFYFSPKRNK
NTAYPFIKRVLKTYSVERQPKILNTDKHSSYGYAITRLMKEGKDTRCCKA
AASQIPE
>pYV0016 tnpA; putative transposase protein
MPVDFLTTEQEQNYGCYVAEPNDVQLVRYFHLDERDLAFIYQRRGKHNRL
GIALQLTTARFLGTFITDLTQVLPGVQHFVAVQLNIRRPEVLSRYAERDT
TRREHTAQIKEYYGYHEFGDFPWSFRLKRLLYTRAWLSNERPGLMFDFAT
AWLLQNKILLPGATTLVRLVSEIRERANQRLWKKLAAIHYLTELNGTKKR
LLDDAPEHIITGPWKRLVYDAEGRIQRAGYSLCLLERLQDALRRRDIWLK
NSDRWGDLREKLLQGEEWQAQRVLVCRALGHPTDGHKGVQQLAVQLDETW
RAVASRFEGNTEVHICNDGKYPSLTISSLEKLEEPLSLLRLNNRVRQLLP
PVDLTELLLEIDARTGFTREFTHVSESGARAQDLHISLCAVLMAEACNIG
LEPLIKHNIPALTRHRLSWMKQNYLQAETLVSANARLVDFQSTLELARRW
GGGEVASVDGMRFVTPVKTVNSGPNRKYFGSGRGITWYNFVSDQYSGFHG
IVVPGTLRDSIFVLEGLLEQQTGLNPVEIMTDTAGTSDIIFGLFWLLGYQ
FSPRLADAGEAVFWRVDKSANYGALDELARGCADLSKAENQWDEMMRTAG
SLKLGTIHASELIRSLLKSSRPSGLAQAIMAVGRVNKTLYLLNYIDDEDY
RRRILTQLNRGESRHAVARAICYGQRGEIRKRYREGQEDQLGALGLVTNA
VVLWNTLYMQEALSWMRSNGEETRDEDIARLSPLMHGHINMLGHYTFTLS
DDILNGELRALNFNLNNELSP
>pYV0093 putative transposase
MIRQAIKKRKVFPTDDSVREVIYLAIRDASKKWSMPIQNWRLAMSRFIIE
FGDRLNDHL
>pYV0039 putative transposase
MPMKEIAKRVHRIYCLLKLNIRRKGKQRLPACNPSPLAVPERLNLSGSVD
FMHNAQCTMH