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Gene list

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COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: pCP13

Number of genes found: 11

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# Clostridium perfringens str. 13, 13

>gid:876348  PCP04  probable transposase
MSKDFLRNYIKEQNFNDSNNVLNSLKDLFNDVLQEVVSAELDDMLGYEKN
LTNQFYNSRNGYSKKTIKSELGTITLNILRYRN
>gid:876349  PCP05  probable transposase
MISKHQRNINRIEDKNLNLYASGITTRDVAGQIKALYDIEISAETVSNIT
NRIMPLVSEW
>gid:876350  PCP06  probable transposase
MLYTTNVIESLNSQFRKFTKTKLIFPNDVSLIKMLYLATEKVNKKWTRNY
PN
>gid:876354  PCP10  probable transposase
MKEVLSICMSTNEGSKFWLSPHKDKKEFAKDLKTIYGSVNETEGMKNLIE
LREKWGSKYPNVVKSWKDNWDNLSTFF
>gid:876355  PCP11  probable transposase
MKMLYLSREKVNKKWTRNYPNWDLVINELKILLNEYLSKECKKKRALRKC
SKSSKIQTKCILLPIVGQNIHNKYFSRST
>gid:876356  PCP12  conserved hypothetical protein
MLVQDLAEELNVTRSEIYNILRRKRFAPLVKKNGSQIIIDNELSELLKEE
LEKKKQLTPKEIKKETTEIQHEVSVTVDEDFLYQNTINILQSQIENRDKQ
IEFKDKQISILNTIIENNLKIIKQLEEKQSSYKNLHEEIELLKNTLLDLT
KRKNKKRFSIF
>gid:876376  PCP32  probable resolvase
MVDYDVNERFILSNKYRGKTLDRDGLNELLIIIRSEATLVVKEIDRLGEN
RKETKELKLFL
>gid:876379  PCP35  conserved hypothetical protein
MTLKKPNERFKEAELKVRELKREAEQRDEYYPYAKTKLKLHYAPEKVIPL
HFDIGDGYVNDLKELINKELKSARYEDLRNSIDNTLDNKEKAFKKEVEPF
YDINKLKEIPIGDIADKLGIDTVKRGNKLWCNLRGEKTASCCINIDKNYF
YDFGGQPEGGDGIKFVSKAEGISAKDSIYRLADMFGIEPENNIDNSFKPS
FHISNSDYKEIGIEPNRAMLNVDINLERQSLAEVMELEKSCAKTMNELAN
DDKSTFLNILNFKSMPIVYNNAKTYYSCIERINEYVKEYNSPIDGFNSLE
VLLYKDFTKSLEEKLNKQIDILYRAGINERIGFDLSEEKVNLKKDLDDLF
SASLSNGVEVYYNSNPDELKVIKSIEEFRDYAIDILVPELSGFEVSEEEI
TKMEKEVKSWTYTDLLEFCEGNDIEIVPLKKEKTIEIEKPVKEVRIKNKP
MEL
>gid:876365  radC  DNA repair protein RadC
MKKIDVVKVYVKKEQSLQIEKDIIKKPEQVFEVVKNFLGEVDREYLIVIV
LDVKNKINSISVASVGTLNSSIVHPREVFKTAILANGASIILAHNHPSGD
TSPSKDDINITTRIKECGVLMGIELLDHVILGDEKFISLKNEGII
>gid:876359  resP  resolvase
MLVGYARVSTEGQSLNRQIDMLVDYGLDKRNIYQEKISGTKLRRDQLDKM
IEELQEGDTVIITDLTRISRSTKDLLNIIDRIKEKGASIKSLKDTWLDTS
GDNPYNSFLLTVMSGLSQLERDLISQRTKEGLRSAKARGRNGGRPSKRND
KADTVGLLYREGYKIVDIVKQTELSRATVYRILKDLNLK
>gid:876391  topA  type I topoisomease
MKKLVIAEKPSLAMNIVKALNSSESFERKDGYFESENYIISFAFGHLFKL
YNIEEYTGEDKGAKWRNDILPFIPKEFKFSIKDDVGVKKQYKILEELIKS
NRVDEIVACGDADREGEVIIRLIINNVFNNNSINKKVTRLWLPEQTTQSI
LYGLNNLKDIDTYNNLANEGFTRTFLDWLVGVNLTRYVTVKSKHLFPVGR
VLVPIVQAIYERDKSIENFVPETYYQIESNEKTNDEIIKLVVKELAFTKS
EFIKAKSFADELNTYEAIVISKDTKKVKKQPSKLFSLSKLQSLLSKKYKM
TFKESLELIQKLYEKGFVTYPRTNTEYLAEAEKGKVKEIIDILCSEGYNL
EFKDKKTIFDDSKIESHSAITPTVKIPKEDELKGKMLDVYNTIKNRFISN
FLIEETLIDRTIIRIEVGDLEFSLKGDVIVQKGFLEYEPIKKDENTLPNL
NVGDKINTNFKAIEKVTQAPGKMTTEMLSNYLKNPFKNYEIENEEEDYKA
ILDGLEIGTEATRTGIIENAKKYKYISENKSVLSIEPLGRKLIETLDKLN
VNLSKEKTVEFSRILKKVYKNELNIDRAVDLISNELKSILEDSKNIEIEA
IKEEKEVIGKCPRCGKNIYETSKSFSCEGYKDEPKCQFNIWKEDKFFKDK
GKKVTKSIAKNLLAGKKVKMTGLKKKDGNGTYDAFVSLNDTGKYVNYKLD
FSK