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Gene list

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COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: pCD1

Number of genes found: 26

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# Yersinia pestis CO92, CO-92 Biovar Orientalis

>gid:869578  YPCD1.01  putative transposase
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPR
PAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAF
IRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRM
LYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTG
QHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMT
RLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>gid:869580  YPCD1.02  putative ATP-binding protein
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEE
KLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIE
RNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQR
QGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMI
LTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKA
GVIAEANPE
>gid:869584  YPCD1.04  
HREGLHVNHKRVYRLYHLSGLGVKRRRRRKGLATERLPLLRPAAPNLTWS
MDFVMDALATGRRIKCLTCVDDYTKECLTVTVAFGISGVQVTRILDSIAL
FRGYPATIRTDQGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFN
GRFRDECLNEHWFSDVSHARKTISEWRQDYNECRPHSTLNYQTPSEFAAA
WRKGNSDSEGSDITK
>gid:869600  YPCD1.14c  putative transposase remnant
FHSDQGGQYRSKKSRQLLWRTGVMQSMSRRGNCLDNSPMERVFRSLKSEW
LLVGGYMDVHHAVRDIGEWIQSYYNTPPSAQWWITAL
>gid:869602  YPCD1.15c  hypothetical protein YPCD1.15c
MVELCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLM
RQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFK
PSEPNRVWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVC
RA
>gid:869603  YPCD1.16c  hypothetical protein YPCD1.16c
MIMTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWI
RQYKEEVSGMTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSE
FPIKSLR
>gid:869619  YPCD1.25  
WGQQYPVVLQSWRKKWANLSCYFRYPTTIRKVIYMTNAIESVHRLFRKLT
KTKGIFPNENSLLKSLYLGLMNAQERWTMPIQSWNLALSQLAIYFEGRLD
KVITL
>gid:869692  YPCD1.63  putative transposase ORFA
MKKARFTETQILRVLKEVEGGRHVKDVCRENGGSEASYYNWKSKYGGMES
SDIKRMKEREEENRRLKQMYASLSLDHEILKDVVAKKL
>gid:869695  YPCD1.64  putative transposase ORFB
MRYVMTEYQASERRGCRIMGISRSLLHYCPNTARDIPVVEVLQKLAHQYP
AYGFGLMFNKLRQSGLPWNVKRVYRVYRLLKLNFRRKGKKRLPNRHPQPL
AIPLKMNHCWSVDFMSDALTDGRRFRLFNVVEILTGKHWQLKLT
>gid:869700  YPCD1.65  putative transposase
MNIPVHRVVRILERLSTERGYPAFIRSDNGPEFIAAALVEWAEHHGVILD
MYLFRSLSEVRTLTEDWRTEYNEERPHSSLGNMPPVIYARQKLDGDPHWR
WY
>gid:869702  YPCD1.66  
LHTHWENLNTFFGYPPDIRKAIYTTNAIESLNSVIRQAIKKCKVFPTDDS
VRKVIYLAIRDASKKWSMPIQNWRLAMSRFIIEFGDRLNDHL
>gid:869708  YPCD1.68c  
MAVGRKNWLFAGSLRAGQRMASILSLLETAKLNGHDPYVWLRDVLTRLPT
WPNSQLNALLPYAENRFS
>gid:869709  YPCD1.69  
YLEGLNLRSKRPRRHVTTRHRHARPEVTALDQCWSMDFVADNLFNGHRVR
ALTIVDNFSRECLALEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGS
EFISKSMDRWAYENRVTMDCSRPGKPTDNAFIESFNGSLRDECLNVHGFL
SLEDAQEKIEQWRQEYNHFRPHSSLNNLTPAEFARSHQKGPDL
>gid:869716  YPCD1.72c  putative targeted effector protein kinase
MKSVKIMGTMPPSISLAKAHERISQHWQNPVGELNIGGKRYRIIDNQVLR
LNPHSGFSLFREGVGKIFSGKMFNFSIARNLTDTLHAAQKTTSQELRSDI
PNALSNLFGAKPQTELPLGWKGEPLSGAPDLEGMRVAETDKFAEGESHIS
IIETKDKQRLVAKIERSIAEGHLFAELEAYKHIYKTAGKHPNLANVHGMA
VVPYGNRKEEALLMDEVDGWRCSDTLRTLADSWKQGKINSEAYWGTIKFI
AHRLLDVTNHLAKAGVVHNDIKPGNVVFDRASGEPVVIDLGLHSRSGEQP
KGFTESFKAPELGVGNLGASEKSDVFLVVSTLLHCIEGFEKNPEIKPNQG
LRFITSEPAHVMDENGYPIHRPGIAGVETAYTRFITDILGVSADSRPDSN
EARLHEFLSDGTIDEESAKQILKDTLTGEMSPLSTDVRRITPKKLRELSD
LLRTHLSSAATKQLDMGGVLSDLDTMLVALDKAEREGGVDKDQLKSFNSL
ILKTYRVIEDYVKGREGDTKNSSTEVSPYHRSNFMLSIVEPSLQRIQKHL
DQTHSFSDIGSLVRAHKHLETLLEVLVTLSQQGQPVSSETYGFLNRLTEA
KITLSQQLNTLQQQQESAKAQLSILINRSGSWADVARQSLQRFDSTRPVV
KFGTEQYTAIHRQMMAAHAAITLQEVSEFTDDMRNFTVDSIPLLIQLGRS
SLMDEHLVEQREKLRELTTIAERLNRLEREWM
>gid:869726  YPCD1.75c  
MLFHSDQGGQYRSKKSRQLLWRTGVMQSMSRRGNCLDNSPMERVFRSLKS
E
>gid:869740  YPCD1.81  
SRRIVGSAISSSPDAELVCRAWRNALETRPREKRLLFHSDQGGQYRSKKY
RQLLWRNGVMQSMSRRGNCLDNSPMERV
>gid:869742  YPCD1.82c  hypothetical protein YPCD1.82c
MVELCRLLKITRSVYSASLNFRVDVKRLQLRELHQQSRGAAGSRTLSLLM
RQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFK
PSEPNRVWSGYISYIKVNGGWCYLALVIDLYSFHW
>gid:869745  YPCD1.83c  hypothetical protein YPCD1.83c
MIMTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWI
RQYKEEVSGVTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSE
FPIKSLR
>gid:869747  YPCD1.84c  hypothetical protein YPCD1.84c
MKRFTRRWSKPMGGMAAHWFTYQYAVPFCGRAKTLVTLSNAEGESVLISP
QQNTAQDISLFMPRELTVSQGDRVRFTRSDTDRGYVANSLWEVAGFTEDG
AVRFRQGDQEKIVDPQKATEDRHIDLAYTLTAYGVQGASERFVIALFGAE
GGRKRMATLHLFT
>gid:869751  YPCD1.85  
RRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWIRQYKEEVSGV
TPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
>gid:869758  YPCD1.90c  putative transposase
MPVDFLTTEQEQNYGCYVAEPNDVQLVRYFHLDERDLAFIYQRRGKHNRL
GIALQLTTARFLGTFITDLTQVLPGVQHFVAVQLNIRRPEVLSRYAERDT
TRREHTAQIKEYYGYHEFGDFPWSFRLKRLLYTRAWLSNERPGLMFDFAT
AWLLQNKILLPGATTLVRLVSEIRERANQRLWKKLAAIHYLTELNGTKKR
LLDDAPEHIITGPWKRLVYDAEGRIQRAGYSLCLLERLQDALRRRDIWLK
NSDRWGDLREKLLQGEEWQAQRVLVCRALGHPTDGHKGVQQLAVQLDETW
RAVASRFEGNTEVHICNDGKYPSLTISSLEKLEEPLSLLRLNNRVRQLLP
PVDLTELLLEIDARTGFTREFTHVSESGARAQDLHISLCAVLMAEACNIG
LEPLIKHNIPALTRHRLSWMKQNYLQAETLVSANARLVDFQSTLELARRW
GGGEVASVDGMRFVTPVKTVNSGPNRKYFGSGRGITWYNFVSDQYSGFHG
IVVPGTLRDSIFVLEGLLEQQTGLNPVEIMTDTAGTSDIIFGLFWLLGYQ
FSPRLADAGEAVFWRVDKSANYGALDELARGCADLSKAENQWDEMMRTAG
SLKLGTIHASELIRSLLKSSRPSGLAQAIMAVGRVNKTLYLLNYIDDEDY
RRRILTQLNRGESRHAVARAICYGQRGEIRKRYREGQEDQLGALGLVTNA
VVLWNTLYMQEALSWMRSNGEETRDEDIARLSPLMHGHINMLGHYTFTLS
DDILNGELRALNFNLNNELSP
>gid:869760  YPCD1.91  putative resolvase
MRLFGYARVSTSQQSLDIQIKTLKDAGVKANRIFTDKASGSSADREGLDL
LRMKVEEGDVILVKKLDRLGRDTVDMIQLIKEFDAQGVSIQFIDDGISTD
GEMGKMVVTILSAVAQAERQRILERTNEGREEAKLKGVKFGRKRRINRKE
LLELHEQGMGATEIAKKMNIARSTIYKVINESQ
>gid:869767  YPCD1.93  putative transposase
MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGV
TELRRLRQLEDENQRLKRLVADLSLDKEMLQDVIRKKF
>gid:869769  YPCD1.94  putative transposase
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIR
YGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRHAR
PEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGD
DVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDCSRPG
KPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFHPHSS
LNNLTPAEFARSHQKGPDL
>gid:869774  YPCD1.96c  putative transposase
MHELEALLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRH
QRGMESRLKQARLPWVKTLEQFDFTFQPGIDRKVVRELAGLAFVERCENV
ILLGPPGVGKTHLAVALGVKAADAGHRVLFMPLYEDITNIGVY
>gid:869777  YPCD1.97c  putative transposase
MGYTGGRSMLRYYIQPKRKMRPSKRTVRVETQPGYQLQHDWGEVELEVAG
QRCKVNFAVNTLGFSRRFHVFAAPKQDAEHTYESLVRAFRYFGGSVKTVL
VDNQKAAVLKNNNGKVVFNSGFLLLAEHYDFLPRACRPRRARTKGKVERM
VKYLKDNVFVRYRRFDSFTHVNQQLEQWMADVADKRELRQFRQTPEQRFA
LEQEHLQPLPDTDFDTSYFDIRHVSWDSYIEVGGNRYSVPEALCGQPVSI
RISLDDELRSYSNEQQVASHRLCSASSGWQTVPEHHAPLWQQVSMVEHRP
LSAYEELL