Gene list
Applied filters:
COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: chromosome
Number of genes found: 119
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Haemophilus influenzae Rd KW20 >gid:851568 HI0011 DNA polymerase III, psi subunit (holD) MNRRDLLLQEMGISQWELYRPEVLQGSVGISVAENIRLITVSDENISSSP LLADVLLSLNLKKENCLCLNYDQIQHMECKQPIRYWLLSENSDQIDRTLP FCKQAEQVYRSPSWQQFQSNHQAKRALWQQIQQP >gid:851575 HI0018 uracil DNA glycosylase (ung) MKNWTDVIGTEKAQPYFQHTLQQVHLARASGKTIYPPQEDVFNAFKYTAF EDVKVVILGQDPYHGPNQAHGLAFSVKPEVAIPPSLLNIYKELTQDISGF QMPSNGYLVKWAEQGVLLLNTVLTVERGMAHSHANLGWERFTDKVIAVLN EHREKLVFLLWGSHAQKKGQMIDRTRHLVLTAPHPSPLSAHRGFFGCRHF SKTNSYLESHGIKPIDWQI >gid:851598 HI0041 exodeoxyribonuclease III (xthA) MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENL GYHVFHHGQKGHYGVALLTKQEPKVIRRGFPTDNEDAQKRIIMADLETEF GLLTVINGYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDKSNPILIMG DMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFR KLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGIALDI RAMEKPSDHAPIWAEFK >gid:851614 HI0057 excinuclease ABC, subunit C (uvrC) MFDAKKFLTDVSHEPGVYRMYDDKDQVIYVGKAKDLKKRLSSYFRKNLSS KKTEALVASIHHIDTTLTSSETEALLLEHNFIKLYQPRYNVLLRDDKSYP FILLTKERHQRITSYRGSKKFAGEYFGPYPHAGAVRETLSLLQKLFPVRQ CENSVYSNRSRPCLQYQIGRCSAPCVQGYVSDEEYNQQVELARLFLQGKD QQVLDYLIGKMEQASRNLDFEQAARYRDQIQAVRSVIEKQFVSNERLDDM DIMSIAYQHGLACVQVMFIRQGKVLGNRSYFPKVPANTDLSELTETFVGQ FYLQGHQGRSIPNSIIVDRQLAEKSELEQLLSEQAGRKVTIQESVKGDKS KYLQLAQVNAKAALNVQLKQSSRMSERYQALCDLLNLPKIKRMECFDISH TMGNQTVASCVVFNKEGPLKSDYRRFNIEGITGGDDYAAMEQVLQKRYER DLEEDKIPDIIFIDGGKGQLNRALNVFQHLQVKWDKNRPHLIGVAKGVDR RAGQEVLIISKQDREIHLPDDSLALHLIQHIRDESHNHAISGHRKKRQKA FTQSGLETIEGVGAKRRQALLKYLGGLQGVKKATLDEIASVPGISPKLAE RIFETLKND >gid:851624 HI0067 DNA mismatch repair protein (mutL) MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGG ANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALA SISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANL FFNTPARRKFLRTDKTEFSHIDEVIRRIALTKFNTAFTLTHNGKIIRQYR PAEAINQQLKRVAAICGDDFVKNALRIEWKHDDLHLSGWVATPNFSRTQN DLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQINWHTDQSAVENHEEN TVREPQPNYSIRPNRATAGQNSFAPQYHEKPQQNQPHFSNTPMFPNHVST GYRDYRSDAPSKTEQRLYAELLRTLPPTAQKDISDTAQQNISDTAKIIST EIIECSSHLRALSLIENRALLLQQNQDFFLLSLEKLQRLQWQLALKQIQI EQQALLIPIVFRLTESQFQAWQQYSDDFKKIGFEFIENQAQLRLTLNKVP SALRTQNLQKCVMAMLTRDENSSSFLTALCAQLECKTFNALADALNLLSE TERLLTQTNRTAFTQLLKPVNWQPLLDEI >gid:851627 HI0070 DNA repair protein (recN) MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRV ETSMVREGQERAEICATFQLESQNPAYHWLSEQELQDPDNPTECILRRII NADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVD NFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDEL DEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSENDTVNIDSLLY RATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQL LQEIEQRISQTLQLARKHQVKPEDLVEQHKKLKAELTALLDFSESEEMLI EQEKRAFEQMQATATALTASRQQSATRLAQNVTQSIKQLAMENAEFYVEL NTDLDKVSANGADNVIFTLRSNLGQQPQPLAKIASGGELSRISLAIQVLT SDQSAIPTLIFDEVDVGISGKTASVVGKLLRQLSERCQVLCVTHLPQVAC HGHHQFNVEKFTVDNKTETKMTALSQAERVPALARLLGGSEITELALANA QEMLDLVH >gid:851638 HI0081 conserved hypothetical protein MHFFDTHTHLNYLQQFTGEPLSQLIDNAKQADVQKILVVAVKEADFKTIQ NMTALFPDNLCYGLGLHPLYIQEHAENDLILLEQALKNRDTNCTAVAEIG LERAIPDLLTDELWAKQCHFFESQLYLAKQFNLPVNIHSRKTHDQIFTFL KRIPLSKLGVVHGFSGSYDQAKRFVDLGYKIGVGGTITYERANKTRQAIA KLPLDALVLETDSPDMPVFGFQGQPNRPERIVESFKALCTLRNEPAELIK KLTWENACQIFS >gid:851670 HI0112 H. influenzae predicted coding region HI0112 MIKARYFYLYKLIVRCRFFIAKYNTLFKQQVIEFYIQNGKNYSLISKHFQ LDSRTLRHWINQFNHSRINGLAVLGKTRNYSLKFKLNVIQTVKNGQFL >gid:851700 HI0137 DNA polymerase III, epsilon subunit (dnaQ) MINPNRQIVLDTETTGMNQLGAHYEGHCIIEIGAVELINRRYTGNNXHIY IKPDRPXDPDAIKVHGITDEMLADKPEFKEVAQDFLDYINGAELLIHNAP FDVGFMDYEFRKLNLNVKTDDICLVTDTLQMARQMYPGKRNNLDALCDRL GIDNSKRTLHGALLDAEILADVYLMMTGGQTNLFDEEESVESGVIRVMQE KTAEEIKSAVDFSHNLKLLQPTNDELQAHLEFLKMMNKKSGNNCLWDKRF GNNNVH >gid:851701 HI0138 ribonuclease H (rnh) MPKQIEIFTDGSCLGNPGAGGIGAVLRYKQHEKTLSKGYFQTTNNRMELR AVIEALNTLKEPCLITLYSDSQYMKNGITKWIFNWKKNNWKASSGKPVKN QDLWIALDESIQRHKINWQWVKGHAGHRENEICDELAKKGAENPTLEDMG YIEE >gid:851755 HI0192 seqA protein (seqA) MKIIEVDEELYQYIASQTRSIGESASDILRRLLSLPVHTSIVNDLIITSA ETDQKPKQAINVKEVNIKTTKKQSITAINQIVEKVQTLLNSTEFQEESKA VVRFLAILRVLYRTNPESFAQATESLQGRTRVYFARDEATLLMAGNHTKP KQIPDTPYWVITNTNSGRKMLMLEGAMQSMELPETLIDEVRSYFTVN >gid:851771 HI0209 DNA adenine methylase (dam) MLRPKKQSLKPKLKHRPFLKWAGGKFRLTDEINKAFPNKKNCLIEPFVGA GAVFLNSNFERYILADINPDLINLFNIVKXNVDGYIEDCKPIFFADDANT PDYYYAKRRQFNASTEPFERSIIFLYLNRFGFNGLCRYNSKNEFNVPFGA YKTHYFPEDELRYFAHKAQSAVFLCCDFQKTFEFADKDSVIYCDPPYAPL QQETNFTGYAGNEFGLAQQRALADLAKSIQKEKQISILISNHDTKFTREI YNGAKFKRVKVQRSISQNPEKRVKVKELIAIFGARK >gid:851780 HI0217 conserved hypothetical protein MSNYRRDFTKGGLYFFTIVLQDRTKSYLTDYINEFRSAYKQTCEHYPFET VAICILPDHIHLLMQLPENDDNYAIRIAYLKTQFTRQLPKECRQFNKNRQ KYRESGIWQRRFWEHLIRDDKDLANHLDYIYYNPVKHGYVEVVKDWPYSS FHRDVKAEIYPEDWGGNPDLKIKGDI >gid:851784 HI0220.2 H. influenzae predicted coding region HI0220.2 MIFHIFQIDFIYSFLISFIMLKNLDEITSSIIADPQNKDFTERGIFPLFS APKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIF AVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQ KYYLPENKDNVTNTVKNYRQFLPHFMPLVHPSPRNQLWVTKNPWFEEQVI PELQILVKQIINKD >gid:851800 HI0231 ATP-dependent RNA helicase (deaD) MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQ TGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYA QGTRIVTLYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELR FIVLDEADEMLRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRF MNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRFLEVEDFDAAIIF ARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEP RERRLLRNIEHLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLE QYRSLLEDLFTADQDQENIAAAMLMLLQGKQKLILPPDPPMEKRRRERND RGDRRENPRSAERRGERKGYGNPQPMDLYRIEVGRADGVEVRHIVGAIAN EGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFAKTRVLNKQMQMSFL GAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRT FSDKPRRDRRSSF >gid:851816 HI0249 excinuclease ABC, subunit A (uvrA) MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQ RRYVESLSAYARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGT ITEIYDYLRLLFARVGEPRCPDHNVPLTAQTISQMVDKVLSLPEDSKMML LAPVVKNRKGEHVKILENIAAQGYIRARIDGEICDLSDPPKLALQKKHTI EVVVDRFKVRSDLATRLAESFETALELSGGTAIVAEMDNPKAEELVFSAN FACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTI SLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMHG SGKEEIEFQYMNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKN ISNRPCIDCGGSRLRPEARNVYIGRTNLPIIAEKSIGETLEFFTALSLTG QKAQIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQ IGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDA IRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEI PKKRTALDKKKWLKLKGASGNNLKNVNLDIPVGLFTCVTGVSGSGKSTLI NDTLFPLAQNALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSN PATYTGLFTPIRELFAGVPEARARGYNPGRFSFNVRGGRCEACQGDGVLK VEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFF DAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTG KTLYILDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW IVDLGPEGGSGGGQIIATGTPEQVAKVTSSHTARFLKPILEKP >gid:851817 HI0250 single-stranded DNA binding protein (ssb) MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREV TEWHRIVFYRRQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEI QGDVMQMLGGRNQNAGGYGNDMGGAPQSSYQARQTNNGNSYQSSRPAPQQ AAPQAEPPMDGFDDDIPF >gid:851828 HI0260.1 H. influenzae predicted coding region HI0260.1 MHQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGITYFL QTEDWFGVNCALRHYYRGGLWGKLNKDRYRFSALETTRSFAEFHLLQRLY EAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKE TWMQIGRLIRKLHDLQICHTDLNAHNILLQQTEQGQKCWLLDFDKCGEKS ADFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLTSAYHQ >gid:851874 HI0305 conserved hypothetical protein MGITALAFDFGTKSIGCAIGQSITGTAQALPAFKAQDGIPNWEAIEKCLK EWKPDVVIVGLPLNMDGTEQDLTLRARKFANRLQGRFGVNVHLQDERLTT TQARSEIFERGGFKALKKGKIDGVSACLILESWFEYAEY >gid:851875 HI0306 conserved hypothetical protein MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGTQDQSKFGWSAPLRG SDLLYFSVGKQILLIAKKEEKILPANVVKRELDDRIESLEQKENRKLKKV EKQTLKDDVVMNLLPRAFSKNQHTALWIDTENNLIHIDAASSKRAEDALA LLRKSLGSLPVVPLAFANEPSTILTNWILQDNLPHWLLALEEAELRGSQE DSVIRCKKQPLENEEILALLQDGKKVVSKLALEWEDTLTFVFNEDCTIKR LKFADTVREKNDDILKEDFAQRFDADFVLMTGILAKLTENLLDEFGGEKA RL >gid:851878 HI0309 integrase/recombinase (xerD) MKNLALIDLFLNEYWIEKGLSENTVQSYRLDLTALCDWLDKNDLSLETLD AVDLQGFLGERLEKGYKATSTARMLSAMRKLFQYLYREKYRVDDPSAVLS SPKLPSRLPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTE LVSLTIENMSVQQGVVRVIGKGNKERIVPMGEEAAYWVRQFMLYGRPVLL NGQSSDVVFPSQRAQQMTRQTFWHRVKHYAILADIDADALSPHVLRHAFA THLVNHGADLRVVQMLLGHTDLSTTQIYTHVAKERLKRLHERFHPRG >gid:851880 HI0312 Holliday junction DNA helicase (ruvB) MIEADRIISGQAKVDEDVIDRAIRPKLLADYVGQPQVREQMDIFIKAAKL RQDALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAM LTNLEPHDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKL DLPPFTLVGATTRAGSLTSPLRDRFGIVQRLEFYSVEDLTSIVARSAGCL NLELEQQAAFEVARRSRGTPRIANRLLRRVRDYADVRNGGIISINVAKQA LSMLDVDDAGFDYLDRKLLSAVIERFDGGPVGLDNLAAAIGEERDTIEDV LEPYLIQQGFLQRTPRGRIATSQTYRHFGLQKLSD >gid:851881 HI0313 Holliday junction DNA helicase (ruvA) MIGRLQGILLEKQPPEILLNVQGVGYELLLPMTSFYDLPEIGQETTLFTH LVVREDAHLLFGFAQKTDRTLFRELIKTNGVGPKLALAILSAMSVEQFAY AIEREELSKLTKIPGVGKKTAERLLVELKGKFKGVKQSDFFVESTHIPLS PSIESHSESSSDEAISALIALGYKPVEAEKMVKRVAKPELTSEQVIREAL KVAL >gid:851882 HI0314 crossover junction endodeoxyribonuclease (ruvC) MSIILGIDPGSRVTGYGVIRQTGKHLEYLGSGAIRTQVEDLPTRLKRIYA GVTEIITQFQPNMFAIEQVFMAKNADSALKLGQARGTAIVAAVNNDLPVF EYAARLVKQTVVGIGSADKVQVQEMVTRILKLSDKPQADAADALAIAITH AHSIQHSLHIANSVKMTETQEKMTALLKTRYSRGRFRLKI >gid:851884 HI0316 datP pyrophosphohydrolase (ntpA) MRSDLTAFLMMQYKNNQSVLVVIYTKDTNRVLMLQRQDDPDFWQSVTGTI ESDETPKKTAIRELWEEVRLDISENSTALFDCNESIEFEIFPHFRYKYAP NITHCKEHWFLCEVEKEFIPVLSEHLDFCWVSAKKAVEMTKSQNNAEAIK KYLFNLRR >gid:851891 HI0324 ribonuclease T (rnt) MSDSQEIPYHNQLKNRFRGYFPVIIDVETAGFDAKKDALLELAAITLKMD ENGYLHPDQKCHFHIKPFEGANINPESLKFNGIDIHNPLRGAVSELDAIT GLFQMVRRGQKDADCQRSIIVAHNAAFDQSFVMAAAERTGVKRNPFHPFG MFDTASLAGLMFGQTVLVKACQAAKIPFDGKQAHSALYDTERTAKLFCYM VNHLKDLGGFPHIASELEQEKTTEKETAL >gid:851893 HI0326 H. influenzae predicted coding region HI0326 MTVQQLIQRLDQKVQQLYQAHLSKREEKIFAKFDRTLFSENGQNVSFYLK EINQTLDRIKTLESNDSNHYNFLAERLLANVPFFRKL >gid:851898 HI0332 DNA repair protein (recO) MQSELQRGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSV LQPFTPLLLRWTGKSTLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRV IESETPNPALFQHYLKCLTGLATETNIEPTLRLFEFQLLQILGYGVDFLH CAGSGEPVDFSMTYRYREEKGFIASLVKDNLTFYGRDLLAFEALDFSDDA VRQAAKRFTRIALKPYLGDKPLKSRELFTQNILLLK >gid:851905 HI0339 primosomal protein N' (priA) MKIVRVALAVPLPRLFDYFVPDDVSLQIGMRVLVPFGTQKRVAIVADFPT KSDVPEDKLKAILQPLDLAPLFTPIYWDWLHWAANYYQAGLGDVLFQALP VKLRNGESAVKNDRTFWRITDAGKNALKQGELKRSKKQAEALQYLSETDL EKGNNDFSSAIWSALKAKGFIEEITIQTNPLSWQQRLGNNPIVNAENRLT LNKQQALAFSQLLFHSGFNVWLLDGVTGSGKTEIYLQYIEEILKSGKQVL VLVPEIGLTPQTVQRFKVRFNVEIDVLHSNLTDTQRLYVWDRARSGQSAI VIGTRSALFTQFSNLGAIILDEEHDSSYKQQDSWRYHARDLAIVLAQKLN ISVLMGSATPSLESINNVQNGKYQHLVLSKRAGNSTALRHFVIDLKNQNI QNGLSKPLLERMKAHLEKGNQVLLFLNRRGFAPVLLCHECGWIAQCPHCE KPYTYHQHQNVLRCHHCGAQKTIPRQCGDCGSTHLVTTGLGTEQLEETLK TLFPHYSVARIDRDSTSRKGKLEGYLEDIQQGKSQILIGTQMLAKGHHFP NVTLVALVNVDSALFSLDFRAEERLAQLYIQVAGRAGRADKQGEVVLQTH YPDHPLLTTLLANGYQAFAKETLQLRHSMGLPPFTFQALIKAQARHSDLA ENCLSQIADFFQSKQITGLQMLGPMPAPFSKKAGQYRWQLLLQHPSRMTL QKALREYQQAELEKNSQVRLILDVDPQDLS >gid:851951 HI0387 ATP-dependent helicase (dinG) MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVIE AGTGTGKTFAYLAPALVFGKKTIISTGSKNLQDQLFNRDLPAIKKALNFT GKIALLKGRANYLCLERLDQVIAQGVLGDKSVLAELSKVRKWNNSTKTGD FTECIELAEDSPIIPQLTSTAESCLGTDCPNYSECYVASARKKALNADLV VVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIASQYFGQSLTS RQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRG NWRELYTQSAVKKAFELLQEKIDFLSEVIKLALGRSQTLDSIFERVESIK IQLKRLSETNIVGYCYWYEGNGRQFGLHITPLTVADKFGAQLEAKEAAWI FTSATLEVGGTFNHFCQRLGIENATQKILYSPFNYPEQSLLCVPRYLPNT NQMNTLNSLGEILLPVIEANKGRCFVLCTSYSMMRGLAEYFREKSHLSIL LQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALSLVIIDKLPFT APDEPLLKARIEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGV VIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK >gid:851962 HI0397 exodeoxyribonuclease VII, large subunit (xseA) MSDNIYSVSQLNSAARQMLEGNFCQIWLTGEISNFTQPVSGHWYLTLKDE NAQVRCAMFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHP AGEGLLQQQFEALKMKLAAEGLFAQNLKKTLPHFSKAVGIITSSTGAALQ DILHILARRDPSLKVVIYPTAVQGKEATAEIVQMIELANARQEVDVLIVG RGGGSLEDLWCFNEEEVARAIFRSTLPIISAVGHETDVTIADFVADLRAP TPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLKQLALRLQ NQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLP YRIQRYQQGLEQLKVRLNFCVNRQVTERQNKLATLCGKLDGLSPLKVLAR GYSIAENPQGKAIVSVKDVNQGDFITTQVADGKIVSKVL >gid:851963 HI0398 conserved hypothetical protein MQFWRKQMSEIQHFSQQDIEILGEQTLYEGFFTLKRIQFKHKLFAGGQSG VVTRELLIKGAASAVIAYDPKEDSVILVEQVRIGAAYHPESHRSPWLLEL IAGMVEKGEKPEDVALRESEEEAGIQVKNLTHCLSVWDSPGGIVERIHLF AGEVDSAQAKGIHGLAEENEDIKVHVVKREQAYQWMCEGKIDNGIAVIGL QWLQLNYAQLQQSWKRS >gid:851967 HI0402 methylated-DNA--protein-cysteine methyltransferase (dat1) MCFSFYKTRRKMTALYYTYYPSPVGRLLILSDGESITHIDFEKEQYAPNP KWHKQDELPVFQKVRLAFERYFNGEVECFSNIPLKPEGTAFQQAIWQALR EIDYGELSTYGELALRINNPKAVRAVGGAVGSNPISIIIPCHRILGKDRT LTGFGGGLEAKRFLLQLEKIPYIDKGTENTKPRFFKKYHE >gid:851968 HI0403 DNA mismatch repair protein (mutH) MIPQTLEQLLSQAQSIAGLTFGELADELHIPVPIDLKRDKGWVGMLLERA LGATAGSKAEQDFSHLGVELKTLPINAEGYPLETTFVSLAPLVQNSGVKW ENSHVRHKLSCVLWMPIEGSRHIPLRERHIGAPIFWKPTAEQERQLKQDW EELMDLIVLGKLDQITARIGEVMQLRPKGANSRAVTKGIGKNGEIIDTLP LGFYLRKEFTAQILNAFLETKSL >gid:851987 HI0422 ATP-dependent RNA helicase (srmB) MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPT GTGKTAAFLLPALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELA QFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRS VEMLIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFA ERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLARFIETEEVTR GIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVS FVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA RIKEKREEKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV >gid:851995 HI0430 DNA-binding protein HU-alpha (hupA) MRFVTIFRNPAFNSSQVRLSFAQFLRQIRKDTFKESNFLFNRRYKFMNKT DLIDAIANAAELNKKQAKAALEATLDAITASLKEGEPVQLIGFGTFKVNE RAARTGRNPQTGAEIQIAASKVPAFVSGKALKDAIK >gid:851997 HI0432 conserved hypothetical protein MKILQQDDFGYWLLTQGSNLYLVNNELPFGIAKDIDLEGLQAMQIGEWKN YPLWLVAEQESDEREYVSLSNLLSLPEDEFHILSRGVEINHFLKTHKFCG KCGHKTQQTQDELAVQCIHCGYQTYPVICPSIIVAVRRGHEILLANHKRH YSPNGGIYTTLAGFVEVGETFEQAVQREVFEETGISIKNLRYFGSQPWAF PNSQMVGFLADYESGEITLQESEIHDAQWFSYDQPLPELPPTGTIARKLI HVTLELCKAEHKCD >gid:852008 HI0443 recombination protein (recR) MQSSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEA MSKIGHCSQCRDFTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQ FSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEG DATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQID >gid:852009 HI0444 DNA topoisomerase III (topB) MRLFIAEKPSLARAIADVLPKPHQRGDGFIKCGDNDVVTWCVGHLLEQAE PDAYDPKFKQWRLEHLPIIPEKWQLLPRKEVKKQLSVVEKLIHQADTLVN AGDPDREGQLLVDEVFSYANLSAEKRDKILRCLISDLNPSAVEKAVKKLQ PNRNFIPLATSALARARADWLYGINMTRAYTIRGRQTGYDGVLSVGRVQT PVLGLIVRRDLEIEHFQPKDFFEVQAWVNPESKEEKTPEKSTALFSALWQ PSKACEDYQDDDGRVLSKGLAEKVVKRITNQPAEVTEYKDVREKETAPLP YSLSALQIDAAKRFGMSAQAVLDTCQRLYETHRLITYPRSDCRYLPEEHF AERHNVLNAISTHCEAYQVLPNVILTEQRNRCWNDKKVEAHHAIIPTAKN RPVNLTQEERNIYSLIARQYLMQFCPDAEYRKSKITLNIAGGTFIAQARN LQTAGWKELLGKEDDTENQEPLLPIVKKGQILHCERGEVMSKKTQPPKPF TDATLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFL TKKGRNIHSTETGRILIQALPNIATQPDMTAHWESQLTDISQKQATYQQF MHNLNQILPDLVRFVDLNALRQLSRIKMIKSDRAKPKSAVKKSSKSNGET D >gid:852020 HI0454 conserved hypothetical protein MFIVDSHCHLDALDYENLHKNISDVVEKAHARDVKHLLAIGVTLSRFEQA YDSLREFNNVSLACGVHPLDFEEEPYDAERLLRLAQDPKVIAIGEIGLDY YYSADNKAAQQAVFGSQIDIANQLDKPVIIHTRSAGDDTIAMLRQHRAEK CGGVIHCFTETMEFXKKALDLGFYISCSGIVTFKNAEAIREVIRYVPMER LLVETDSPYLAPVPYRGKENQPAYTREVCEYVATLKGVSAEAFAQITTQN FERLFKIRVE >gid:852021 HI0455 DNA polymerase III, delta' subunit (holB) MTALYPWLMPIYHQIAQTFDEGLGHHAVLIKADSGLGVESLFNALAQKIM CVAQGDKPCGQCHSCHLMQAHSHPDYHELSPINGKDIGVDQVRDINEMVA QHAQQNGNKVVYVQGAERLTEAAANALLKTLEEPRPNTYFLLQADSSASL LATIYSRCQVWNLSVPNEEIAFEWLKSKSAVENQEILTALAMNLGRPLLA LETLQEGFIEQRKNFLRQFWVFYRRRSPLELLPLFDKERYVQQVDWILAF LSDCLKHKLEIDSHRQVADLGRGIEQFSDEQTALGLLQAIKIMQKVRSDL LTINGVNVELMLLDGLTRLVTEVFETQ >gid:852058 HI0493 conserved hypothetical protein MRGRTRIGKFTTCGERNPKKVARTQPTKKDLKTQNPILHSDQGWLYQMVG YQAILRENSIQQNMSRKGNYLDNNAMENFFGRLKTECYYDKRFETFKQLK KQLMSIFIITTMITFRGN >gid:852078 HI0513 modification methylase (hindIIM) MDESKKISLGQFFTPTHIVKYMIGLMTKNKNASILEPSSGNGVFLDSLIQ LGYTNLTSYEIDGDIISHPFVINSSFITSYDKPQYDSIIGNPPYVRWKNL SELQKKELKDNSIWKMYCNSLCDYFYIFIIKSILQLKVGGELIFICPDYF FSTKNAEGLRKFLINNGSFEKIILFNESKVFHGVSSSVVIFKYIKGKNID NINIINIDSKSPIKSEDIESLGESYYIPRFSSSDVWVTSPNHIKVALDKF ESYCKTIKKVQPKSLFDDLEFSRIGSVCDIGNGMVSGLDKAFQMNDINYS ELELLNSICVAKAKHLDAFCFSGYTRYKFILDDINEDKLITYFPNFFYEF NNYKDYLLKRYSYNKYLPYWKWAFLRNFSLFSKNEKKIFVPCKERISKKS NFRFSLVDEFIYPTQDVTALYKKENVKESIEYITAYLNSKAVFLWMKYKG VVKGNVVEFSEKPLANIPFRRIDWQLKSEKKIHDDITNLVRKYLSNKEFS ILHEINLNLEKLGIKVEI >gid:852097 HI0532 DNA primase (dnaG) MKGSIPRPFIDDLLTKSDIVDVINTRVKLKKAGRDYQACCPFHHEKTPSF TVSQKKQFYHCFGCGAHGNAISFLMDYDKLEFIEAIEELAAMAGLEIPYE KRVNHSGKPQANYQTKRNLYELMQEIATFYQNQLPLNTQAQEYLQQRGLS PEIIERFQIGFVPNAMDTVLRKFGVNREEQQKLIELGMLSRNDRGNIYDK FRNRIMFPIRDKRGRTVAFGGRVLTDEKPKYLNSPETITYHKGKELYGLY EALQTNDEPKQLLVVEGYMDVVALAQFGVDYAVASLGTSTTSEQIQLILR STEQVVCCYDGDRAGRDAAWRALENALPYLEDGRQLKFIFLPDGEEPDTY IRQYGKEKFEEYIESAQSLSEFMFAHLSPQVDFSTKEGRGKLVALAAPLI HQIPGEMLRLSLRNMLAQKLGIFDQTQLENLIPKKLEQANTQQKVTHNKI KKTPMRMVISLLMQNPELVKRMSESGVQALRAEAGFEILEKLTALCRQRE GITTGQILEYFRNTSYSNPLEILATWDHLLDESDIINAFSQNYRRLNIQA IERDIEMLIAKERTEGLTNEEKTVLVHLLAGKEQQKKQLVNPL >gid:852111 HI0546 primosomal replication protein N (priB) MGVVSRLPKRLKSPSGIEHCKFLLEHRSDQIESGFTRQAWLKMPVQISGN QLIEKTQSITVGSKILVVGFITSHKTQSGLCQLVLHAEQIEFID >gid:852119 HI0554 H. influenzae predicted coding region HI0554 MTTKYNAGIHHRRSIRLKHYNYRSEGFYFITICCKNKECLFGHIINQQMQ LNDLGNYVKQCWENIPMFFPQVRIDEFVIMPNHLHGIIEIIEQVKGKCNL PLQLRATQLPQKGTSQTIGSIVRRFKAGVTSWARKNSEIFDVWQRNYYEH IIRDEKSYLQIYEYIQNNPILWEQDQLYVD >gid:852132 HI0567 DNA gyrase, subunit B (gyrB) MSETTNDNYGASSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN AIDEALAGHCSDIIVTIHDDNSVSVQDDGGGIPVDIHPEEGVSAAEVIMT VLHAGGKFDDNSYKVSGGLHGVGVSVVNALSDKLQLTIRRQGHVHEQFYH LGEPQSPLTVIGETEATGTTVRFWPSSDIFAITTFDYKILAKRLRELSFL NSGVSIRLIDKRDGSEDHFHYEGGIQAFVEYLNKNKNPIHPKPFYFTAEK DGIGVEVALQWNDGVNENVYCFTNNIPQRDGGTHLAGFRGALTRSLNSYM ENEGMLKKEKVATSGDDAREGLVAIISVKVPDPKFSSQTKDKLVSSEVKS AVESAMNEKMQEYLLENPADAKIIVNQIIMAARAREAARKAREMTRRKGA LDIAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKVGRDRKTQAILPLK GKILNVEKARFDKMLSSQEVGTLITALGCGIGRDEYNPDKLRYHHIIIMT DADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKKGKQERYIK DADEMEQYELTLALDGAELHISTNAPAMNALVFEKLVAEYNSVQKLIGRL NRHYPAPVLQGLIYQSPISIEMMKEESAVENWGKSFVEQLTAKETEAHQY SVRTQFNAERQVYEAVITVRKHGIDTDYFLNFDFVHGNEYAKIVSLNKQL NGLLEEGAYVIRGEKVQPVRSFEQAVEWLVKESRKGLEVQRYKGLGEMNA DQLWETTMDPNSRRMLKVSIKDAVAADQLFTTLMGDEVEPRREFIELNAL RANLDV >gid:852165 HI0600 recA protein (recA) MATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDV ALGIGGLPMGRIVEIFGPESSGKTTLTLSVIAQAQKAGKTCAFIDAEHAL DPIYAAKLGVDVKELFVSQPDNGEQALEICDALVRSGAIDVIIVDSVAAL TPKAEIEGDMGDSHMGLQARLMSQALRKLTGQIKNANCLVVFINQIRMKI GVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIGNETRVKVVKN KLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIG QGKANSMKWLNENIEKSDELEARLRAELVANPEQALMADIEQSENNTESE SDFE >gid:852187 HI0616 ATP-dependent helicase (hepA) MPFAIGQRWLSESENALGLGVITALDQRTVTIYFPAADETRIYAMAQAPL SRIVFSKGETLSHQAGWQGEILDVQNMNGLLFYLVKNPQDEDVIVQERDI SPIISFSQAKDRLFSAQIDRSTHFALRYRTLCHQQAQFKSPLRGLRGTRA SLIPHQLHIAAEVGNRVNPRVLLADEVGLGKTIEAGMILQNQLFAEKVQR VLIIVPETLQHQWLVEMLRRFNLHFALFDEERCNDFDLDAVNPFTTESLI ICSLNWLETHPNRVELVLNAQFDCLIVDEAHHLVWSETSPSTAYLLVEQL ARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQEHYQPV VNAVESLLANKALSAVEKNHISDLLLEQDVEPLFKAIASNNDEEQQRARQ ELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDF LKLHRNEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAA AYFADLENGAQVLLSSSIGSEGRNFQFAANLVLFDLPTNPDLLEQCIGRL DRIGQKRDVQVYVPCAKDSPQSRLARWYNEGLNAFEQTCPMGMALFSQFA DELEKVRSNSTALSENEFSGLLKQTKTAREKLKIELEKGRDRLLELNSHG GEQAQALADQIADEDNSPELVNFALKLFDIIGVEQEDLGANSIVISPTGT MLVPDFPGLKEEGVTVTFDRELALAREEMEFLTWDHPMIRQGIDLVASGD IGKAAMALLVNKQLPAGTLLIELIYVVESQSPKGLQLNRFLPPTPIRLLL DNKGNNIGEQVAFETLHSKLKPLGKNITNQMVKMARSNIESLIMRGDQLV KSLAEPIIAEAKNQADQQLSAEINRLQALRAVNKNIRQSEIDILEQQRTQ SLDELSKANWRLDCLRVIVTNKE >gid:852228 HI0649 ATP-dependent DNA helicase (rep) MKLNPQQQQAVEYVTGPCLVLAGAGSGKTRVIINKIAHLIEKCGYSPKQI AAVTFTNKAAREMKERVAHSIGKEQSKGLLVSTFHTLGFDILKREYKALG FKSNMTLFDEHDQFALLKELTADVLKEDKDLLRELISVISNWKNDLISPK QAFALARDAKYQTFAKCYERYATQIRTYNALDFDDLIMLPTLLFKQNEEV RSKWQAKIRYLLVDEYQDTNTSQYELIKLLVGDRACFTVVGDDDQSIYSW RGARPENMVRLRDDFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDK KLFSTIGKGEKLLVIEAKNEEHEAERIVAELIAHRFSRKTKYKDYAILYR GNHQSRLLEKVLMQNRIPYKISGGTSFFSRAEIKDMMAYLRLVVNQDDDA AFLRIVNTPKREIGTATLQKLGELAQEKHISLFEAIFEFELIQRITPKAY DSLQKFGRWIVELNDEIQRSEPERAVRSMLSAIHYEEYLYEYATSPKAAE MQSKNVATLFDWVADMLKGDETNEPMNLNQVVTRLTLRDMLERGEDDDDS DQVQLMTLHASKGLEFPYVYLIGMEEGILPHQTSIDEDNVEEERRLAYVG ITRAQKELTFSLCRERRQYGELVRPEPSRFLAELPNDDVLWERDKPKLTT EQKQEKTQNQLDRLRAILKS >gid:852233 HI0654 DNA-3-methyladenine glycosidase I (tagI) MTTRCPWVGEQSIYIDYHDKEWGKPEFDSQKLFEKICLEGQQAGLSWITV LKKRESYREAFHQFDPKKIAKMTALDIDACMQNSGLIRHRAKLEAIVKNA KAYLAMEKCGENFSDFIWSFVNHKPIVNDVPDLRSVPTKTEVSKALSKAL KKRGFVFIGETTCYAFMQSMGLVDDHLNDCPCKTS >gid:852236 HI0656.1 conserved hypothetical protein MNQSLFHHSKQQEYCPQCGAPLQIKQGKKGLFLGCSAYPECDYLRPLQRS EHKVLKTLDEICPKCGNLLQLKQGSFGMFIGCSHYPECDFVVREESESEE KITCPECKTGHLISRRGRQGKIFYGCDNFPKCKFSLPAKPYSVPCPTCHF PLSLLKSEDGEKQIFQCANKTCRHIFEQ >gid:852255 HI0676 integrase/recombinase (xerC) MLTALNRYWDYLRIERQMSPHTITNYQHQLDATIKILAQQDIHSWTQVTP SVVRFILAESKKQGLKEKSLALRLSALRRFLSFLVQQGELKVNPATGISA PKQGRHLPKNMDGEQVQQLLANDSKEPIDIRDRAILELMYSSGLRLSELQ GLDLNSINTRVREVRVIGKGNKERVVPFGRYASHAIQEWLKVRALFNPKD EALFVSQLGNRISHRAIQKRLETWGIRQGLNSHLNPHKLRHSFATHMLEA SSDLRAVQELLGHSNLSTTQIYTHLNFQHLAEVYDQAHPRAKRKK >gid:852284 HI0707 DNA mismatch repair protein (mutS) MISEENFQQHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKKAAAL LDISLTKRGQSAGQPIPMAGMPYHAVEGYLAKLVQLGESVAICEQIGDPT TSKGPVERQIVRIVTPGTVSDEALLPERQDNLIAAVYQEKEKFGLATLDM TSGRFQLCEPADKETLRAELQRIAPVELLYCEEFNEMAAIEHCKGLRRRP IWEFELSTAITLLNRQFGTKDLRAFGVEKSPLGLSAAGCLLQYAKETQRT ALPHIQSISLIQNQDCIQLDAATRRNLELTQNLAGGTENTLASVLDKCVT PMGSRLLKRWIHQPVRDVEKLKQRQQSIAEILNFDLVDELQPYLQLVGDM ERILARVALRSARPRDLTRLRTALEQIPALRAIVQQKTPPFLTALFSQIA DFSEQCDLLQRALIETPPLLIRDGGVIAEGYNAELDEWRMLSDGATQYLE NLEKRERESTGIDTLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNA ERYIIPELKEYEDKVLKSKGAALALEKQLYDELFDLLLPHLGSLQLASLA LSELDVLVNLAERADTLNYVMPTFCDEVSVKIKNGRHPVVEQVLKDPFIA NPVELNHNRHLLVITGPNMGGKSTYMRQTALITLLAYIGSFVPADSARIG PIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEIGRG TSTYDGLSLAWACAEWLSKKIRSLTLFATHYFELTALPEQLEGIANIHLD ALEHNNTIAFMHAVQNGAASKSYGLAVAALAGVPQSVIKLAKQKLTQLEK NSSYSAEQQIQALREANHNQGELFFEQETDALREAIEKLDPDDLSPKQAL AYLYQLKKMVG >gid:852288 HI0710 H. influenzae predicted coding region HI0710 MALTNSSISFRTVEKTKLEAYQVIEQYGLTPSQVFNMFLAQIAKTRSIPV DLNYLRPNKETLAAIDELDSGNAESFFIEASENYSAEEFTKRILNGGQ >gid:852311 HI0728 ATP-dependent DNA helicase (recQ) MLDSPLLSKIIEKPTALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVM ATGNGKSLCYQIPALCFDGLTLVISPLISLMKDQVDQLQANGIEADFLNS SQTLEQQQQVQNKLISGQLKLLYVSPEKVMTNSFFQLISYSKVCFIAIDE AHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQDILRHLN LKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRN KVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFG MGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAW LQKILLEKPETPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPC NNCDICLDPPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKI IERQHHKLSVYGIGKDKSKEHWQSVIRQLIHLGFVQQVISELNPTLQLTE SAKVILKGEEPLELAMPRISAISKIAHNPQRQGVANYDKDLFARLRFLRK QIADKENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQP FMALIQEHKAILANAQNND >gid:852323 HI0739 DNA polymerase III, alpha subunit (dnaE) MSSQPRFIHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCG VVSFYSEMLSSGMKPIIGADVKVKSPLCGDEYFDLTLLAKNNEGYRNITL LLSKAYQRGYNDLPYIDQDWLIEHRDGVIILSGGTQGDVGKKLLKENVAE IESAVAFYQEFFADHFYLALSRTGRPNEERYIQAALKLAERCDLPLVATN DVMFLNTEDFEAHEIRVAIHDGYTLDDPKRPKCYTSQQYFRSEEDMCKLF ADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGL EERLVFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQW SKDNDIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMP DFDVDFCMDGRDRVIEHVAETYGRGAVSQIITFGTMAAKAVIRDVGRVLG HPYGFVDRISKLIPPDPGMTLAKAFETEPQLQTAYDSDEEVRALINMARK LEGVTRNAGKHAGGVVISPTLITDFAPLYCDNEGLHPVTHFDKNDVEYAG LVKFDFLGLRTLTIIKWALDIINVRMVREGKPRVDIAAIPLDDPESFELL KRSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDN FIDRKHGREEVSYPDAEYQHASLKPILEPTYGIILYQEQVMQIAQVLAGY TLGGADLLRRAMGKKKPEEMAKQRLVFKEGAEKNGIDGELSMKIFDLVEK FAGYGFNKSHSAAYALVSYQTLWLKTHFPAEFMAAVMTSEMDNTDKIVGL YDECLRMGLKVTPPDINIGKHHFSVNEQGEIVYGIGAIKGVGEGPIEALV AARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK NLEDALRASDQHAKDEAMGQTDMFGVLTETHEDVENAYANTPPYTEKQIL DGERETLGLYLSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLVV ASRIAMTKKGNRLGIATLDDRSGRLDLTLFGESLEQFGEKLQKDTVIVAS GQVSFDDFSGGLKMTVRELMTLDEARSRYVKSLAISLSEHQITPSFIKQF KALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDEILTELVNLLG ESAVELEFE >gid:852342 HI0759 A/G-specific adenine glycosylase (mutY) MLAKSSINAPFAKSVLAWYDKFGRKHLPWQQNKTLYGVWLSEVMLQQTQV ATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYARARNLHKAAQK VRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVL ARYFAVEGWSGEKKVENRLWALTEQVTPTTRVADFNQAMMDIGAMVCMRT KPKCDLCPLNIDCLAYKNTNWEKFPAKKPKKAMPEKTTYFLILSKNGKVC LEQRENSGLWGGLFCFPQFEDKSSLLHFLAQEKVTHYQEWPSFRHTFSHF HLDIHPIYAEMESTLCVEQANLDWRKVMESTKEYQSNLSSAVKYWYDPQN PEPIGLAQPVKNLLIQFVRNHYGKNSIL >gid:852350 HI0767 conserved hypothetical protein MKKIQTPNAKGEVRIIAGLWRGRKLPVLNSEGLRPTGDRVKETLFNWLMP YIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLK CSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCEN NWLKPNALIYVETEKDKPLITPENWTLLKEKTTGIVSYRLYQN >gid:852440 HI0856 DNA polymerase I (polA) MAQIATNPLVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLI SQVQPTHIAVVFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIR ALGIPLLVVEGIEADDVIGTLALQASSLGKKVLISTGDKDMAQLVDDNIM LINTMNNSLLDRKGVIEKYGIPPELIIDYLALMGDSADNIPGVAGVGEKT ALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEKNNADLSYTLA TIKTDVELNVTTDQLLLGESQKDQLIEYFARYEFKRWLNEVMNGADSITQ TTEQPVKMNQYKATSQDQSAVENTPKIQIDRTKYETLLTQADLTRWIEKL NAAKLIAVDTETDSLDYMSANLVGISFALENGEAAYLPLQLDYLDAPKTL EKSTALAAIKPILENPNIHKIGQNIKFDESIFARHGIELQGVEFDTMLLS YTLNSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATEY AAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLI DSDALFMQSNEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLELP VLQKTPKGAPSTNEEVLEELSYSHELPKILVKHRGLSKLKSTYTDKLPQM VNSQTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRHIRQAFIARE GYSIVAADYSQIELRIMAHLSGDQGLINAFSQGKDIHRSTAAEIFGVSLD EVTSEQRRNAKAINFGLIYGMSAFGLSRQLGISRADAQKYMDLYFQRYPS VQQFMTDIREKAKAQGYVETLFGRRLYLPDINSSNAMRRKGAERVAINAP MQGTAADIIKRAMIKLDEVIRHDPDIEMIMQVHDELVFEVRSEKVAFFRE QIKQHMEAAAELVVPLIVEVGVGQNWDEAH >gid:852477 HI0892 ATP-dependent RNA helicase (rhlB) MIFMQQDYLSQQRFSALPLHPIVRGALAKKGFDFCTPIQALSLPISLNGR DVAGQAQTGTGKTMAFLTATFHHLLTHQDPNLKYPHPRALILAPTRELAV QISNDAEFLAKASGLKTALAYGGDGYDKQLQAIERGVDILIGTTGRVIDY VKQGVIGLDEIQVVVLDEADRMFDLGFIRDIRYLLRKCPAPQARLTMLFS ATLSYKVRELAFEDMNEPEYIEIEPEQKTGHRIKEELFYPSNQDKMALLL TLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSL LKQFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTG RAGESGVSISFACEEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRL KRAVPPQGHTRHRSYHAK >gid:852486 HI0901 conserved hypothetical protein MIDFDGYRPNVGIVICNRKGQVLWAKRCGQNSWQFPQGGINDNESAEQAM YRELHEEVGLQPKDVRLLYVSKHWLRYKLPKRLLRYDSKPMCIGQKQRWF LLQLVSDEKNINMQTTKSPEFDGWRWVSFWYPVRQVVSFKRDVYRKVMKE FASILFTDNPLIFSASREANSLHYSANKKYSQTKYTKRHFYKSRGQ >gid:852494 HI0910 mutator mutT protein (mutT) MDKKIIQVAAGIIRNEFGQIYLTQRLEGQDFAQSLEFPGGKVDAGETPEQ ALKRELEEEIGIVALNAELYERFQFEYPTKIISFFFYLVNEWIGEPFGRE GQEGFWVEQHALDAGQFPPANAKLIHRLLNETHNFI >gid:852507 HI0923 DNA polymerase III, delta subunit (holA) MNRIFPEQLNHHLAQGLARVYLLQGQDPLLLSETEDTICQVANLQGFDEK NTIQVDSQTDWAQLIESCQSIGLFFSKQILSLNLPENFTALLQKNLQELI SVLHKDVLLILQVAKLAKGIEKQTWFITLNQYEPNTILINCQTPTVENLP RWVKNRTKAMGLDADNEAIQQLCYSYENNLLALKQALQLLDLLYPDHKLN YNRVISVVEQSSIFTPFQWIDALLVGKANRAKRILKGLQAEDVQPVILLR TLQRELFTLLELTKPQQRIVTTEKLPIQQIKTEFDRLKIWQNRRPLFLSA IQRLTYQTLYEIIQELANIERLAKQEFSDEVWIKLADLSVKICL >gid:852526 HI0942 exodeoxyribonuclease V, gamma chain (recC) MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPNMAQWLQIEL AKETGISANLKFPMPASFIWQLYAQNLPATALENPFDKDSMMWRLMRLIP IFLEKENFSPLRNYLSSSPHSEQYKLYQLSSKIADLFDQYLVYRPEWIFA WEKGEDEQITDQIQKQQPNLNATLFAQIQGNTKWQGELWRALVVDVKSDV NEATHRAALHNQFLALLADKKAPKKLPSRIFIFGIPALPTAYLNILQAIS SEVDIHLFFNNPCQEYWGDISDLRLDYLRSRQRYQFNKQDENQPLFSEDQ LSQLENAQFDVTYQKENLQLGNPLLAAWGKMGRDFLYILVRDEEHIPTYP VNAYQEIESNSLLGQLQSQILHLENKPLNIAKNDRTLTLHSCHSAMREVE VLHDYLLDLFNQDPSLTPKDVVVMVADINQYTPYIQAVFGQKNGDVPQIP FSLSDNKLSESDVLVSSYLTLLRLKESNFSAEDVLVLLDIPAMRERFNIS LADLPLVREWVTDSGIRFGLQKNQDGINFNSWQAGLERMILGYAMREEQG IWQDSLGLNSSYGLKGELAGNLSHFFTALSALHETLQQAHSIEKWQEILT ALLSDFFVRNEDTSDMIFYIQEKINELAEHLKTLHFNEELQAEVIADVIT MQLEDAPNSLKFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQTPN SFDLMQYHYQKGDRVRRDDDRYLFLEALLAARDYCYISYVGRSITDNQPK EPSVLVSQLLDYINQGQKENVLTVIEHPMTAFSPDNFKNNEKFTRSFATK WLPIAQFDASSNNSEFAVTMTENLEKIEEVELDALVSFVENPVKFFFEKQ LGVYFRDKDERIADSENFTLSGLDNYSLNNDLIYLDEQNFADYFRQAEVK GVLPRAEFGKVYAENIRDNVLEFKKKIADLGEAKHASVDFNLSVDWQNEN QKIRLFGYMDALFGDDSQVIHWHFAKYKDRYCIRPWIYYLIQCVTQENAV PAKLITQDKVLELPPIEREVALAQLQIYVKDYLQSQIEIQLVPTVRNISD FIVSDENSVSEKLQELTESNGFGPKADPYWSRVLAQTSRFKQPENIAKLL KQTKAWFGLLFAQKKTRKTQS >gid:852530 HI0946 formamidopyrimidine-DNA glycosylase (fpg) MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELITLKNVKIV DLTRRAKYLIIHTEKGYIIGHLGMSGSVRIVPQDSAIDKHDHIDIVVNNG KLLRYNDPRRFGAWLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQK STALKTFLMDNAVVVGVGNIYTNESLFICGIHPLKLAKNLTRNQCFSLVN TIKDVLRKAIIQGGTTLKDFLQPDGRPGYFAQELLVYGNKDKPCPKCGGK IESLIIGQRNSFFCPKCQKRG >gid:852537 HI0952 DNA repair protein (radC) MRSKSFLFFFYKYMENNDELMPREKLLAFGAKALSDYELLAIFLRTGIKG CPVMSLSKNVLTHFGPLHALLSADKKAFCSVKGLGITQFIQLQAITEMTK RYLKQDMLSTPIINDPETVKLFLLTELQHEEREVFMVLFLDNQHRLIKKE RLFLGTIYVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQLIT KKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL >gid:852567 HI0980 Hin recombinational enhancer binding protein (fis) MLEQQRNSADALTVSVLNAQSQVTSKPLRDSVKQALRNYLAQLDGQDVND LYELVLAEVEHPMLDMIMQYTRGNQTRAANMLGINRGTLRKKLKKYGMG >gid:852572 HI0985 DNA processing chain A (dprA) MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAI QIRRWFKPEAKFIEPALVWSQKEGNHLVNYFSPFYPFLLKQTASFPPLLF VKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALG IDGHCHQAVVNIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEF LPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITARYALEQNREV FAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFD QIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFNLSVDVL LVQLLDLELQDLIISENGLYKRV >gid:852578 HI0991 DNA/ATP binding protein (recF) MAISRLLVEKFRNLTAVDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGR SFKSAVTNRIISYDEPHFTLFGQIQESQHQWSIGLQKLRQGNTLVKINGE DGNKISDLAHLLPMQLITPEGLTLLNGGPSYRRAFLDWGLFHHQTSFYSA WSNLNRLLKQRNAALAQNQPYSAIKIWDVELAKLAHQVSEWRAEYAEALS PEIEQTCQLFLPELEINVSFHQGWEKNADYYEILQQNFERDRALNYTFSG PQKADFRFKAQGLPVEDVLSRGQLKLLMCALRLAQGEHLMKEKQRHCIFL IDDFASELDQYKRALLAERLQQSGSQVFVTAITQRQLKEMQVENKKMFSV HNGIINALN >gid:852579 HI0992 DNA polymerase III, beta subunit (dnaN) MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDYRLTITGTDLE VELSSQTQLSSSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQDRALVQ SGRSRFTLATQPAEEYPNLTDWQSEVDFELPQNTLRRLIEATQFSMANQD ARYFLNGMKFETEGNLLRTVATDGHRLAVCTISLEQELQNHSVILPRKGV LELVRLLETNDEPARLQIGTNNLRVHLKNTVFTSKLIDGRFPDYRRVLPR NATKIVEGNWEMLKQAFARASILSNERARSVRLSLKENQLKITASNTEHE EAEEIVDVNYNGEELEVGFNVTYILDVLNALKCNQVRMCLTDAFSSCLIE NCEDSSCEYVIMPMRL >gid:852580 HI0993 chromosomal replication initiator protein (dnaA) MNLSNLWQSCLLQLQDQVSASDLSTWLRPLQADVVADNHIVLYASNMFVK GWVETHYLAQIQQICQTLAQNPELRISLKEGVKPAPKIVESTPNTSLRSE SAVDFQAESSASVKFESHLNTKHLFDNFVEGKSNQLARAVGQKLAQAPGE PSANPFFLYGGTGLGKTHLLHAIGNGILADKPNARVLYIHANNFMQHMVK AVRDNKMDQFKKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNSLFETGR QIILTSDRYPKEIEKIEERLKSRFGWGLTTAIEPPDLETRVAILLKKAEE HNMNLPEEVAFFIAQRLRTNVRELEGALNRVKAMQDFKGGDIDIDFVRDT LKDILALQERLVTIENIQKVVAEYYRIKVSDLKSKSRARSVTRPRQIAMA LAKELTNRSLPEIGRAFDRDHTTVLNACREVPKFREQDNSIQEDWANLIR TLSA >gid:852594 HI1008 conserved hypothetical protein MKTLFTSVVLCGALVVSSSFAEEKATXQTAQSVVTTQAEAQVAPAVVSDK LNINTATASEIQKSLTGIGAKKAEAIVQYREKHGNFXNAEQLLEVQGIGK ATLEKNRDRIIF >gid:852627 HI1041 modification methylase MKCVDLFSGCGGLSLGFELAGFEICAAFENWEKAIEIYKNNFSHPIYNID LRNEKEAVEKIKKYSPDLIMGGPPCQDFSSAGKRDISLGRADLTYSFANI VCNIRPKWFVMENVEQIKKSHILQDIINQFIDFGYGLTSAILDASYCGVP QSRTRFSLIGKLNSEHNFLIPTLSRKLSDKPMTVRDYLGNSLNLEFYYRH PRNYNRRGIFSIDEPSPTIRGVNRPIPKGYNINSCDPKGVELAKVRPLTT IERSYIQTFPKSFLFSGTKTDLEQMIGNAVPVNLAKFVASAIINFEKEPI RSMG >gid:852642 HI1056 H. influenzae predicted coding region HI1056 MAGKAPKKAKKFILNAIIVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQS VSQSVSQSVSQLYTKLTRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSRYT ADGKQAVGEIKRHSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDP PYNTGNDGFKYNDKFNHSTWLTFMKNRLEIAKTLLADDGVIFVQCDDIEQ AYLKILMDDIFDRDNFLNIVTVKTKIGGVSGSSEGKSLKDSTEFINVFSK NRERLFLNPVYQKTEVNEFIKNYEDSGKSWKYTQVLIDLGEKILLEEKDG FKYYHYPNAQMTSIVKFSQDQNLSKEIIYTEYSHKVYRTTNAQSSIRSKI IEDLYSIKNGIVSIEYIPQKGKNAGNLIEVFYNASNKDMFMFLSDMLIKE KNKYFYLQKVNTLWDDIQYNNLNKEGGYIDFKNGKKPEALLRRIIDMTTK EGDIVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERLKKVIDGE QGGISKAVNWQGGGEFVYAELAPFNETAKQQILACEDSDDIKTLFEDLCE RYFLKYNVSVKEFSQIIEEPEFQSLPLDEQKQMVLEMLDLNQMYVSLSEM DDEQFAGCLNDDDKALSRAFYQAEKKDGE >gid:852643 HI1058 H. influenzae predicted coding region HI1058 MKTDIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLG NDDLKRHFFVEVNGVLVFKLQDFRFFLDKHSINNSYTKYANRIGLTDGNR FLKDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNSQSVSQSVSQSVS QSVSQSVSQSVSQSVSQSVSQSVSQSVSQSIIHQINPKKTRNLF >gid:852644 HI1059 ribonuclease HII (rnhB) MFEYPQGYKLIAGVDEVGRGPLVGAVVTAAVILDPHNPIEGLADSKKLSE KKRLALAEEIKEKARAWALGRAEADEIDEINILQASLLAMTRAVKSLKIQ PHFVLIDGNKIPKDLAIPAQAVVKGDSLVAEISAASILAKVARDQEMEEL DKQYPEYAFAQHKGYPTKLHLEKLAELGALPQHRRSFAPVKKALEQF >gid:852655 HI1070 ATP-dependent helicase (hrpa) MKNSSVKHTLTPLQQSLFSQLNDIMLVDQRRLSARIHGIGKIKSQEAQQA VAAEIQQQIEQARLRVEQRKSAVQNPIVFPESLPVSQRKVEIQKLISEHQ VIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIAARSVAARIAE ELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCL IIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNN APIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIF MNGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVL ATNVAETSLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR KGRCGRVSEGICIRLYSEEDFNSRPEFTDPEILRTNLASVILQMTALGLD DIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRLLTRVGRQLA QLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQEKQQASDEK HRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIREW QDIYHQIRLTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQY LGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEP LAEHLIKKSYSVPLWSKSRGAVIADEKVTLYGVPIVAVRPVNYGAIDPTV SREIFIQSALVEGGWNTKHKFFKENQRLVREVEELEHKSRRRDILVDDRT LFEFYDQRIGTEVVSQKHFDTWWKKAQQKDPELLNFEHSFLINDDAEQVS KLDFPNFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQ IPGLREELVIALIKSLPKSYRRNFVPAPNYAQAFLSRAVPLEKPLLDTLI YELRRMTGVTVEAEHWNWEQIPSHLKMTFRVVDENGKKIAESMNLDELKF NLKDRVQESISAVADDGIEQSGLHIWSFADLPQCYEQKQRGFSVKAFPAI VDEKDAVGIKLFETEFEQSVAMQQGLRRLLLLNVPSPIKYLHEKLPNKAK LGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEAGFEKLRDFVREN LNEVTVDIAQKVEQILTLTYQLNQRLKGKMDFTMAFALSDIKSQLAGLVY QGFVQKSGYDRLPDLQRYLQAVDKRIDKLAQDVNRDRAAMLRVEQVQQAY QQLLAKLPKSKPISDEVAEIRYMIEELRVSLFAQQLGTKYQISDKRIGNI ISQY >gid:852683 HI1100 DNA ligase (lig) MRSFFSENFMTNIQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQ LKALELEHPEFLTSDSPTQRVGAKPLSGFSQIRHEIPMLSLDNAFSDAEF NAFVKRIEDRLILLPKPLTFCCEPKLDGLAVSILYVNGELTQAATRGDGT TGEDITANIRTIRNVPLQLLTDNPPARLEVRGEVFMPHAGFERLNKYALE HNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDLPTTHY ARLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSSLGYDIDGTVLK INDIALQNELGFISKAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPV AKLEPVFVAGVTVSNATLHNGDEIERLNIAIGDTVVIRRAGDVIPQIIGV LHERRPDNAKPIIFPTNCPVCDSQIIRIEGEAVARCTGGLFCAAQRKEAL KHFVSRKAMDIDGVGGKLIEQLVDRELIHTPADLFKLDLTTLTRLERMGA KSAENALNSLENAKSTTLARFIFALGIREVGEATALNLANHFKTLDALKD ANLEELQQVPDVGEVVANRIFIFWREAHNVAVVEDLIAQGVHWETVEVKE ASENLFKDKTVVLTGTLTQMGRNEAKALLQQLGAKVSGSVSSKTDFVIAG DAAGSKLAKAQELNITVLTEEEFLAQITR >gid:852765 HI1182 H. influenzae predicted coding region HI1182 MKFYRTLLLFFASSFAFANSDLMLLHTYNNQPIEGWVMSEKLDGVRGYWN GKQLLTRQGQRLSPPAYFIKDFPPFAIDGELFSERNHFEEISSITKSFKG DGWEKLKLYVFDVPDAEGNLFERLAKLKAHLLEHPTTYIEIIEQIPVKDK THLYQFLAQVENLQGEGVVVRNPNAPYERKRSHKF >gid:852766 HI1183 H. influenzae predicted coding region HI1183 MMGALTCKNHRGEFKIGSGFNLNERENPPPIGSVITYKYRGITNSGKPRF ATYWREKK >gid:852771 HI1188 DNA helicase II (uvrD) MMDISELLDGLNDKQRERVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAV ENISEGSIMAVTFTNKAAAEMRHRIQSTLAKHAQHQLFGMWIGTFHSIAH RLLRAHHLDVGLPQDFQILDSEDQLRLIKRLLKLHNFDEKAFPPKQACWY INNKKDEGLRPNDIEDFNDRQEREWIKIYQIYQDTCDRAGLVDFAELLIR VYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKILAGKTGQVMI VGDDDQSIYGWRGAQIENIQKFLKDFKAETIRLEQNYRSTANILNSANEL IANNSDRLGKNLWTEGEKGDPVGIYSAFNELDEAKFVASQIQDWVEHGGK LDDCAVLYRSNSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLR LINNRQDDAAFERVINTPTRGIGDRTLDILRNLTRERQITLWQAVQVATQ ENMLAGRASTALLRFQELINSLQLDTAEMPLFAQTDFVIKHSGLYEMYQQ EKGEKGEVRIENLEELVTATREFIKPDNAEEMTELTAFLTHASLEAGEEQ ASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER RLAYVGITRAKKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRL RGTVTRAMNLAKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSEN NTRLQIAFQAQGIKWLIAHLAKLEKVR >gid:852797 HI1214 single-stranded-DNA-specific exonuclease (recJ) MKKLIKRREIPIGNSVSNHPLLDRLYRARHIQNTKELDRTLKSMLNPNQL YGIEQAVNLLVEAYQPQQKIVIVGDFDADGATSTALSVLALRQLGFSDVD YLVPNRFEQGYGLSIPVAEMAIEKGVQLLMTVDNGVSSFDGVAFLKEKGI RVLVTDHHLPPETLPPADAIVNPNLSQCGFPSKSLAGVGVAFYLMLAVRA KFRELGIFTAETQPNFTDLLDLVALGTIADVVPLDQNNRILAYQGLMRIR ARHCRLGIIALAEVANRNVEQFTSSDLGFCIGPRLNAAGRLDNMSIGVEL LLANEMSKARELALDLDQLNQTRKEIEAGMKLEAIKICQNLTALFKELPY GITLYQPDWHQGVLGIVSSRIKDQYHRPVIAFAQDSEGILKGSARSIEGL HMRDVLERIHSQHPNMILKFGGHAMAAGLSIREEHFADFQHIFNQTVADW LDEEHLQGVIWTDGELNSNEFNLETAELIKSVGTWGQGFPEPCFDGEFKI LDQRAIGQNKNHLKMLLEPKQGGVLLDAIAFNINTRLYPDLSIKQARLAY KLEINEFRGNRSLQLLVDYIEPIDE >gid:852804 HI1221 integration host factor, beta-subunit (himD) MTKSELMEKLSAKQPTLPAKEIENMVKGILEFISQSLENGDRVEVRGFGS FSLHHRQPRLGRNPKTGDSVNLSAKSVPYFKAGKELKARVDVQA >gid:852809 HI1225.1 conserved hypothetical protein MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDK GSGKTHLLRAFSNEYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLD DLQSVIGNDEWELAIFDLFNRIKASGKTLLLISADKSPSALSVKLPDLNS RLTWGEIYQLNSLTDEQKIKVLQLAAYQRGFQLSDETANFLITRLARDMH TLFEALDLLDKASLQAQRNLTIPFVKKILNL >gid:852812 HI1229 DNA polymerase III, subunits gamma and tau (dnaX) MSYQVLARKWRPKTFADVVGQEHIITALANGLKDNRLHHAYLFSGTRGVG KTSIARLFAKGLNCVHGVTATPCGECENCKAIEQGNFIDLIEIDAASRTK VEDTRELLDNVQYKPVVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYV KFLLATTDPQKLPVTILSRCLQFHLKALDETQISQHLAHILTQENIPFED PALVKLAKAAQGSIRDSLSLTDQAIAMGDRQVTNNVVSNMLGLLDDNYSV DILYALHQGNGELLMRTLQRVADAAGDWDKLLGECAEKLHQIALMQLLPQ KSSDNNEHFSFLAKHISPENVQFFYQVIVSGRKDLSNAPNRRIGAEMTLL RALAFHPKFLTAVPKANTTITPPPSTPSAVENTGNYVDVPVLSQSIKSAY SQAKPNKTSIPNLASLSALDALEHLTQLENQERQEHKAESLAVVSETLHH IQELDEEKSHKKMTALPVREMTEPKPKHIEKPTLPSNAAQAPQKNSTEEN SSDDNVEIAQDEQEILSADTYRWEWSNPELAKADTGVCPSDIKQAILKDI TPELRLKIITQTQQQDQWADIVERSGLTGFSKELALNCFLQSKTDDEINL GLHSEKSHLRQDRSIKNLAEALSKLQGKDIRLTINLDDSNVTTPIEYRRN IYQALREKAQNELQKDSKLQILLNEFDAKLDVESIRPV >gid:852830 HI1247 excinuclease ABC, subunit B (uvrB) MSEKINTKPFILHSDFRPSGDQPQAIEKLAENLTDGLAHQTLLGVTGSGK TFTIANVIAQLNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDY YQPEAYVPSSDTFIEKDASINDQIEQMRLSATKSFLERRDTIVVASVSAI YGLGDPDSYLQMMLHLQQGAIIDQRQILAKLAELQYTRNDQAFQRGTFRV RGEIIDIFPAESDDRAVRIELFDDEIERLSLFDPLTGSSFGAVPRFTIYP KTHYVTPRERILDAIENIKKELVSRREYFIKEHKLLEEQRISQRTQFDIE MMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPPDAILIIDESHVTVP QIGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSAT PGAYELEKSGSEIIDQVVRPTGLLDPLIEIRPVSIQVDDLLSEARQRADK NERVLVTTLTKKMAEDLTDYLDEHGIRVRYLHSDIDTVERVEIIRDLRLG EFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARN LNGKAILYADSITKSMEKAITETNRRREKQTKYNEEHGIVPQALNKKVGE LLDIGQGANQKAKANKQRGKMAAEPTALYNAPKNAKEYQQQIKKLEQQMY KFAQDLEFEKAAAIRDQLHQLREQFVFDN >gid:852841 HI1258 transcription-repair coupling factor (mfd) MKTAFFQPDIPTQPNDHKILGNVLPGADALAISEISEQNQNLTVVVTPDT RSAVRLSRVLSELSSQDVCLFPDWETLPYDTFSPHQEIISSRLSALFHLQ NAKKGIFLLPISTLMQRLCPPQYLQHNVLLIKKGDRLVIDKMRLQLEAAG YRAVEQVLEHGEYAVRGALLDLFPMGSAVPFRLDFFDDEIDSIRTFDVDT QRTLDEISSINLLPAHEFPTDDKGIEFFRAQFRETFGEIRRDPEHIYQQI SKGTLISGIEYWQPLFFAEMATLFDYLPEQTLFVDMENNQTQGERFYQDA KQRYEQRKVDPMRPLLSPEKLWLNVDEVNRRLKSYPRITFKAEKVRSSVR QKNLPVAALPEVTIQSQQKEPLGQLRQFIEHFKGNVLFSVETEGRRETLL DLLSPLKLKPKQIQSLEQIENEKFSLLVSSLEQGFIIEQSLPVAIIGEAN LLGKRIQQRSRDKRKTINPDTLVRNLAELKIGQPVVHLDHGVGRYGGLVT LDTGGIKAEYLLLNYANESKLYVPVTSLHLISRYVGGSDESAPLHKLGNE AWAKSRQKAAEKIRDVAAELLDVYAQREAKKGFAFKYDREEFQQFSATFP FEETYDQEMAINAVISDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVMN HKQVAVLVPTTLLAQQHYENFKDRFANLPVNVEVLSRFKTAKEQKQILEN LAEGKVDILIGTHKLIQSDVKFNDLGLLIIDEEHRFGVGQKEKIKQLRAN IDILTLTATPIPRTLNMAMNGIRDLSIISTPPARRLSIKTFVRQNDDLVV REAILREILRGGQVYYLHNDVASIENTAEKLTALVPEARVIVGHGQMRER ELERVMSDFYHQRYNVLVCSTIIETGIDVPTANTIIIERADHFGLAQLHQ LRGRVGRSHHQAYAYLLTPPPKMMTKDAERRLDALENLDNLGAGFILATH DLEIRGAGELLGNEQSGQIESIGFSLYMELLDAAVKALKEGREPSLEELT QQQADIELRVPALLPDDYLGDVNMRLSFYKRIAAAESKAELDELKVELID RFGLLPDATKNLLQITELRLLVEPLNVVRIDAGTQGGFIEFSAKAQVNPD KFIQLIQKEPIVYRFDGPFKFKFMKDLSDNKVRLEFVVDLLRTIAA >gid:852847 HI1264 DNA gyrase, subunit A (gyrA) MTDSIQSSITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVL FSMDREGNTANKKYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLR YMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQALLTDLDKETVNFSPNY DGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLNGCLAYID KNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVE TNEKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEG IRIEIDIKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEI IEAFVLHRREVVTRRSIFELRKARERTHILEGLAVARSNIDEMIAIIRNS KNREEAATSISSRSWTLHSDIINLLDASARPDELEENLGIQGEQYYLSPA QVNAILELRLHRLTGIAFEEVIKEYEELLVKIADLLHILSSAERLMEVIR EELEEVKAQFGDDRLTEITAASGDIDLEDLIAQEDVVVTLSHEGYVKYQP LTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWLK VYQLPQASRGARGRPIVNILPLQENERITAILPVSAYEEDKFVVMATAGG IVKKIALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRV VRFAENAVRAMGRLATGVRGIKLALTNDISDDESAVEIEDISDDNAEASL DLNIDKVVSLVVPKGEGAILTATQNGYGKRTQLSEYPTKSRNTKGVISIK VSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSEVSIVGRNTQGVRLI RTADDEHVVSLERVCDADEDDSLEESSSEE >gid:852861 HI1280 conserved hypothetical protein MLTFWHWKWLGIKNTEFKCVKGKLYLSPIKDLFNNEIIAYDLVRSPNSEQ ITQMMKQAVARLAGAKPILHSDQGWQYQMIGYQNILRENGI >gid:852868 HI1287 type I modification enzyme (hsdM) MPASARWQALQEVSILNTGAELPWGGKFSGVAKLIDDAFDAIEKDNEKLK GVLQRISGYAVNEDTLRGLIILFSDTHFTRPTYNGEPVHLGAKDILGHVY EYFLSRFAQAEGKRSGQYFTPKSIVSLIVEMLEPYSGRVYDPAMGSGGFF VQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKYNA DSFTQPQHIDKKMDFIMANPHFNDKEWWNESLADDPRWAYGTPPKGNANF AWLQHMIYHLSPNGKIALLLANGSMSSQTNNEGEIRKAIINADLVECMVA LPGQLFTNTKIPACIWFLNRNKKRKGEVLFIDARQIGYMKDRVLRDFTAD DIAKIADTLHAWQTSDGYEDQAAFCKSATLEEIKNNDFVLTPGRYVGTAE QEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGGLGYE >gid:852876 HI1296 nuclease, putative MINRKILLTSLLLIFTVLSACSREKNTCRVVKISDGDTLTCLTKGNKSIK VRLAEIDAPEKSQAFGQKSKKTLSDLVYQKNVRLARKGKDRYQRTLAVVY YQKQNINLEMVKQGMAWAYKQYSHDPIYLQAQENAQAKGIGLWADNNPIE PSQWRRQEKINMAFDYQTFPSSISLFPT >gid:852893 HI1313 integration host factor, alpha-subunit (himA) MATITKLDIIEYLSDKYHLSKQDTKNVVENFLEEIRLSLESGQDVKLSGF GNFELRDKSSRPGRNPKTGDVVPVSARRVVTFKPGQKLRARVEKTK >gid:852901 HI1321 exodeoxyribonuclease V, beta chain (recB) MAETIPLNPITLPLNQISLIEASAGTGKTYTIGSLYLRLLLKAGENNFSR PLNVEEILVVTFTEMATEELKKKIRERITDAINKLTAFAKTQDKSAFKND EFLTALCDNLNIFEAIHRLKLAEQNMDLAAIYTIHGFCRRMLMQYAFHSG IHFNLELIKDQSDLLVRFANEFWREHFYPLDFESANFIATELVSPANVLS LLKADLGKDLQVEIENKQALSVPIQIFLPQYLGGYQKALNELKAFWLESA DEISAIITNELVKDYPKDQLKSLNRKKYQVKRLGDWINKINQWSNNPRDY QINTTLKDYFLQSSIEKNCEESTDKNKDKKPATPFYSPIFADLEKRVNAL MTPDLLSKLTLYHYRQGLQQKLLDYKLNHQEKSFDDLLRLLCEALQDAQG DELAEMIRFQYPFAMIDEFQDTDSQQYAIFSKIYRDNPEKNTGFIMIGDP KQAIYRFRGADIFTYLKASDEAQSRFELTKNYRSEKHLVDGVNALFDFPQ SPFIYQNIKFTAVDSRDDHLRFYLNGKVEPAYRFYLTESDKVNKTEMAKI CAISIQHWLKSAAENQAVFQNEDTYKTLQAANIAVLVRDKNEAALVKNEL QKLGIASVYLSDQNSVFDSNVAKELAWVLKACLNVAERPILNAIATALFG LNAADIHQIQQNEADWQRWADSFAQYQQTWQRQGILAMLHQILLEQGISE RLLSQATGERDLTDFLHLAEILQQAATLHESEAALLSWFEKQIQGEARQE AQIRLESERQLVKIVTIHKSKGLEYDLVWLPFLAAPSKDPSKKYINIYYS KERDETLWDIENRNLNALCEETFAEELRLLYVALTRAKYQMAFALPAQFD KKWNALHYVLSQGEIGKEINLSDSKDTETLLQTFKEKMQDNVEICTKPNL EALPTLSINTKNDDFKASEFTGNIEQDWRITSFTSIEQAHRRQNYFTESA GKKHAVFDDAKDYDSQNAIEISTALLNENESNILDLPRGKQVGTALHRHF ENCYFSDLANTEEIDKLRQSLQLDETFTESLQNWLQQISHTPLSNEIGIA LADLANKDCIKEMPFYLAIREHFDVEAFNHTLKAHHHLPSESLQFEQIQG MVRGSIDLVFRHNGKYYLVDYKSNFLGSTLADYNQEALKKEMLHSHYDWQ YLIYTLALHRYLQSVVPHYDYARDFGGVFYLFLRGMNGEPQSGVFYDRPS VELITELDGVF >gid:852902 HI1322 exodeoxyribonuclease V, alpha chain (recD) MLSVLHKLKELRILSQGDYYFAKLIADKQCHTDYAEPVKNLAILLAALCS WRYTQGNTCSQLDRYLEHNLFGLAYRTTEEDYLAEIHEKIGYLPVEDWQN ALCGHMAFTQDPVNQIAPMAFQFGALYFYRAWQDEYRIVQYIKNTLKKYR TLAFSYDEIHQKLEKYFPEKQEKTDWQKVAVATAIKSPFSIITGGPGTGK TTTVTRLLLVLQELFDCKLHIKLVAPTGKAASRLEESIKNALGFMQEKMN VSHSLFNAIPQKASTLHSLLGVNAFNDYTRYNSHNPLQLDVLVVDETSMI DLPMMAKLINALKPETRLILLGDQAQLASVEAGAVLGELAQFVTQPYSHE QAAYLLATTGYKVEGSDCSNPIRDCLCHLTESRRFDKDSGIGKLSEFIQK GKADDSLELFDHYPQELHFNSLNDEGDAVNQVVKSAVENYRTFLKMLDDL RKQKIDPNAKNEQGISYAEAIQVQFNSVRFLTALRNNNLGVENLNKEIAL ALREQKLLWFRNEQDWYIGKPIMITENDHNVRLYNGDIGLCLANGKVWFG NREVLTNRIPAHEPAFMMTIHKSQGSEFKHTVMVLPTEVNPVLSRELVFT GVTRAKKELTVFADEKIWKTAIRQTVKRQSGLGKLLEDLN >gid:852909 HI1328.1 H. influenzae predicted coding region HI1328.1 MKCKVYTVVVPNVQSATLLPIIREKVKPDSIVYTDTFRSYDVLDVSEFSH FRINHSTHFAENHNYINGIGNFWNHAKRHLQKFNGIPKEHFELYLKECEW RFNNSEIKSQISILKQLVKGSLV >gid:852910 HI1329 IS1016-V6 protein (IS1016-V6) MRKSRLSQHKQNKLIELFVAGVTARTASKLVNVNKNTATITFIDYAYSFI KQAHIWKCLKAKLKPMKAISAVLEKANVVAVLQGKSQYSGFSNEMQGLYR RCS >gid:852945 HI1365 DNA topoisomerase I (topA) MSKSLVIVESPAKAKTINKYLGSQYVVKSSVGHIRDLPTVGSSTGEKAKP ISTKGMDAEEKAKIKAEKERNALVKRMGIDPYHDWKANYQILPGKEKVVS ELKSLAKKADHIYLATDLDREGEAIAWHLREVIGGNDDRFSRVVFNEITK NAIKQAFEKPEQLNMDRVNAQQTRRFLDRVVGFMVSPLLWKKVARGLSAG RVQSVAVKLLVEREREIKAFQPEEYWEVAVLTNNQNKQAIRLDVTDYKGK KFDPKNQKEAQSAVDFLNVSDYVVTDLETKPTSSRPRAPFITSTLQQTAS TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMARSYIENHFG AQYLPEKPNFYSSKENAQEAHEAIRPSDIRALPESLEGMEKDAVRLYDLI WCQFLACQMPPAQYDSSTLTVTAGDYTLKAKGRILRFDGWTKVLPQIGKN PEDQELPSVTVSEKLALKEVQPTQHFTKPPARFTEAALVKELEKRGIGRP STYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNESFGELMNYDFTA NMEDTLDKIASGSVNWKTELNQFFKDFSSQLSKAELDELEGGMRPNSLVE TDIKCPTCGRNMAIRTASTGVFLGCTGYALPPKERCKTTINLIPEAELLN VLDESSETKALMDRKRCTKCGTAMDSYVIDAHRKIHICGNNPNCDGYLIE EGSFKIKGYDGPVVECDKCGADMHLKLGRFGKYMGCTNCDNTRKILKNGE VAPPKEEPVHFPELKCEKSDAYFVLRDGASGVFMSAHNFPKSRETRPVKI AELVQYRERLPEKLAYLADAPQKDPEENEAIVRFSRKEKKQYVTSEKEGK ATKWIVDFTNGKWVERKK >gid:852958 HI1377 exodeoxyribonuclease I (sbcB) MVKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQT NDYLPAPEAVMVTGITPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNN IRYDDEMTRYTFYRNFIEPYEYSWKNGNSRWDLLDLVRACYALRPEGINW AYDDDGMPSFRLEKLTKANSIEHENAHDAMADVYATIAMAKLIKEKQPKL FQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCTWVAPLAWHPT NQNALIVCDLTGDIDNLLAKSADELRADLYTKKLELEERGVSSVPLKLVH INKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN EERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFEASLQRLVEX HSDNSEKLSLLQQVYEYGIKLLG >gid:852975 HI1392 modification methylase (hindIIIM) MIDCIYNSDSIXEIKKLDSNSIHAIISDIPYGIDYDDWDILHSNTNSALG GTSSAQHKTSLFKRRGKPLNGWSEADKKRPQEYQEWVESWSNEWFRVLKS GSSVFVFAGRQFAHRVVVAFENSGFTFKDMLSWEKDKAPHRAQRISCVFE RRGDIANTNKWVGWRVANLRPLFEPILWFQKPYKTGSTLADNLIKHEVGA WNENSLTHWNIQQGALNHSNILKVRITSEDKGYHVAQKPLNLMKLLIDLV TKEEQIVLDPFAGSGTTLLAAKELNRHFIGYEKNNGIYNIAVNRLGIEKN NCFYNKEKK >gid:852980 HI1397 DNA polymerase III, chi subunit (holC) MAKTAQFYILTENCTLTVEEIACNLAASIWRSGKKVLISCESEAQALEID ERLWQRDPNEFVPHNLSGEATQYPTPIEISWLGKRNLQRRDLLINLQQEI PDFSHSFTQIIDFVPKDDALKTQARERYKQLRLQGWNLSTENVG >gid:852993 HI1411 terminase, small subunit MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVIN VKASELLNKNGKITVRVEELRQAHQQRHNLTLDNIIADLQEYRDICMGRK PLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVD VTTDGKPLPTVINVTFSDEPA >gid:853005 HI1424 integrase/recombinase, putative MHRLRQCNMKWGAEEEKKIELQAQGLQPDTLFSDVIKRYLNKITPTKRGE KHEFNRLNRFLRHPVTDKYISDVSRRDIEDWIAERLESVKSESVRRELST IGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEENINAIVAISEY VDTLKTAKARTAAAILFAVETAMRAGKICSLSWGNVNFEKRTAFLPMTKN GTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDATFRKLKKLAER EYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVA ELLD >gid:853022 HI1437 exodeoxyribonuclease, small subunit (xseB) MARKPASSQDFETTLVQLENIVTHLENGDLPLEEALKEFEQGVQLAKLGQ ERLQQAEQRIQILLQKTEDAPLNDYKGNDYEGNA >gid:853063 HI1478 transposase (muA) MDNQSLKTHYSVYELANLKLKTLPSAPKNIWEQAKRENWKSQKRQGRGGG LEYELASLPIEVQNELLLKTTPEQTAVALQKIEETRPLASNEVWQLWDEA SAKAQEQAKIKLGTMFAVANLVESGVNVLDAFRLVCGKENAERLKNNEKL LSVGSLKNWWYRVKDAPRQDWLPLMLNNSGKSSKNVAEIDEAAWQFFKNF YYSREKPSLAHSYEVLKQAAQYNGWRIPSRSSLKRKMERDVPKTEEVFRR EGQYALSRLYPSQVRTVAMLQAMEWINGDGYQHNVWVRFPDGEIKRPKTW LWQDVRTRKVLAARTDKSENTDTIRLSLLDVISRYGLPKHLTIDNTRAAA NKKMTGGVKNRYRYQVNENEVQGIIPALGIELHWTSIQFGKGRGQAKPIE RAFSHGGLGDYVDKHLLLRGAYAGANAYEKPDYDGKNGAEQPVDYATFLM ALEQGIQQWNNVGNRLTEICAGKSSYAEAFERDWAVAEKRPISQSQMRLL LTLHEEVRLNQDGTFYLNAGKIGTNKNRYESLALIGTSHKRVVVRYDPAN LHDKVWVYAXTGEYLAEAEITEKAGFGDQMAGREHNKAMRNWVKHTEKAA KERAKAEEMELSNYAPAVEFEERFLEMLPEPVKAPQTQAEEVEYEEVLDF NTVRKVPKAVEVEAEEISEFNRDWEKGLELLKKSKGR >gid:853065 HI1480 H. influenzae predicted coding region HI1480 MSETDLLLKMVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEEN WHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRH LQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVS FEYWHA >gid:853098 HI1512 conserved hypothetical protein MATQFQGSAIIRLNGKEWPSDNDGTLTPGGKERETVKGSRVYGFSEKPTE AMVECTVFNCAETDVMELQNITNATVEFETDIGQVYLLPGAWTVETGTLS ADGKIKLKMASIECKRVQ >gid:853114 HI1528 topoisomerase IV, subunit B (parE) MTTNYSAQEITVLKDLEPVQIRPGMYTDTTRPNHLAQEVIDNSVDEALAG FATKIEVILHPDQSIEVTDNGRGMPVDIHPTEGVSGVEVILTKLHAGGKF SNKNYEFAGGLHGVGISVVNALSERVDIQVKRNGEIYKIAFENGSKVEEL EIIGTCGRRTTGTIVHFKPNPKYFDSAKFSVSRLRHLLRAKAVLCSGLEI KFIDKVNNTQDIWLYEDGLSDYLIEAVNGFETLPKKPFVGEFKGANEAVS WALLWLPEGGELIGESYVNLIPTIQGGTHVNGLRQGLLDAIREFCEFRNL LPRGVKLTADDIWDRCSYILSLKMQDAQFAGQTKERLSSRQSAVFVSGVL KDAFSLWLNQNVQDAEKLAEIAISSAQRRLRAAKKVVRKKLVSGPALPGK LADCGSQDLEKTELFLVEGDSAGGSAKQARDREYQAILPLRGKILNTWEV SPDQVLGSTEIHDIAVALGIDPDSNDLSQLRYGKVCILADADSDGLHIAT LLCALFLRHFPKLVQDGHVYVAMPPLYRIDLNKEVFYALDENEKEAILDR LKNKKGKPNVQRFKGLGEMNPSQLRETTMDPNTRRLVQLTYDLGEDQGSD TLELMDMLLAKKRSEDRKNWLQAKGDQVDLSV >gid:853115 HI1529 topoisomerase IV, subunit A (parC) MTNINYEGIEQMPLRTFTEKAYLNYSMYVIMDRALPFIGDGLKPVQRRIV YAMSELGLNATAKYKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYR YPLVDGQGNWGAPDDPKSFAAMRYTESRLSKISEILLNELGQGTVDYQPN FDGTLAEPQYLPARLPHILLNGTTGIAVGMATDIPPHNINEIADAAVMLL DNPKAGLDDVLEIVQGPDFPTEAEIISPKSEIRKIYEQGRGSIKMRATWK KEDGEIIISALPHQSSPSKVIAQIAEQMTAKKLPMLEDIRDEADHENPIR IVLVPRSNRVDTDALMAHLFATTDLEKSYRVNMNMIGLDHKPAVKGLLEI LNEWLDFRRTTVTRRLQYRLDKVLSRLHILEGLMIAFLNIDEVIEIIRHE DDPKAELMARFNLSDEQADAILNLRLRHLAKLEENQLKAEQDELEKERLN LEAILGSERRLNTLIKKEIQEDAKKYANPRMSQLVEREEAKMISESDMTP AEPVTVILSEMGWVRCAKGHDIDPKSLSYKAGDSYLAHACGKSNQAVVFI DSTGRSYALDPLSLPSARSQGEPLTGKLNLPTGATIEYVVMASEQQELLM ASDAGYGFICKFEDLIARNKAGKALISLPENAKVLKPKTLINSTALVVAI TSAGRMLIFPAQDLPVLSKGKGNKMITIPAANAKDRSELLTKLLLISDQA SLEFYSGKRKIVLKPEDLQKFRAERGRKGSTLPRGLHTNLEIMVIEP >gid:853150 HI1564 H. influenzae predicted coding region HI1564 MEKTGLPLSLESFQQLLPQIFMRAKGRSIRLIGLHVNLPEENKQEQMSLW >gid:853160 HI1574 replicative DNA helicase (dnaB) MDFSTVFYFLFSPHFSLKSNRYLRYHRRHSSIEISPMASQPQIKSSDKKT AQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTE MEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILA YADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEK RTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTGFTDLDKKTAG LQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMM RMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLT PTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLK ALAKELQVPVVALSQLNRTLEQRGDKRPVNSDLRESGSIEQDADLIMFIY RDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREY RDDY >gid:853163 HI1577 IS1016-V6 protein, putative MRESRLSQYKQNKLIEIFLASVTALATAKLVNINKLQLITFIVYHCLSLK AAYIWKCLKVKFKRMKAILVVL >gid:853175 HI1590 conserved hypothetical protein MSNFNFDFAENDFGPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHI YSMIFWGPPGTGKTTLAEIIAQRINAEVERISAVTSGIKEIREAIDRAKQ NRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELN NALLSRARVYVLKSLTTAEIEQVLQQAVEDPKRGLGKERLILEENLLQVL AEYVNGDARLALNCLELMVDMADETENGKKIDRTLLKEVLGERQARFDKQ GDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASE DVGNADPRAMQVALAAWDCFSRVGAYEGERAIAQAIIYLSVAPKSNAVYT AFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAA GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK >gid:853240 HI1656 conserved hypothetical protein MFSLKRQQGASFEHQARLFLESKGLIFIAANQNFKCGELDLIMNDKETIV FVEVRQRSHSAYGSAIESVDWRKQQKWLDAANLWLAKQNMSLEDANCRFD LIAFGKTPQDIQWIPNFLD >gid:853248 HI1664 conserved hypothetical protein MRFFIGKEMLFDSHLHLDQLSDENIQQTLAHSKIIGMLAVSTNLNSAKKL LNLKQTYPKKLYIAAGFHPEQQLPSLEEQKKLFQWIDEHHSSISAIGEVG LPHYSKRENPNLDYVPYIELLERFILIAKKWDLPLNLHIVHNDVEIALEL LQKHNIQRAHFHWFKTDEKSFQKFFSTPYFASLTPDILWNSKTQYVAQHL SLNRLMIETDSPWQHEGFERAGISEQLLAVLQKLAELKSLPLHSVQKQIL LNTQQFYRL >gid:853273 HI1689 endonuclease III (nth) MNKTKRIEILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKA TEKLFPVANTPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKH NGEVPENREALEALAGVGRKTANVVLNTAFGHPTIAVDTHIFRVCNRTNF AAGKDVVKVEEKLLKVVPNEFKVDVHHWLILHGRYTCIARKPRCGSCIIE DLCEYKEKVEF >gid:853304 HI1720 conserved hypothetical protein MICTPKVGLNNQLTKVQFFMTKYNFLFKQQVIEFYLQNDKNSSLTRRHFQ LAETTLERWINQFNHSGINGLALLGKKRNYSPEFKLNVIQAVKNGKFSAE AACLHFGIANSGVVSQWLQAFEKQGINGLIPKPKGRPTMKLQYPKMPPKP KTREEELELENLRLRAENAILKKLQELNQQKMQKKPLS >gid:853305 HI1721 transposase, putative MTFKLRETIKINHKKVQRIMQWLGLKGKCKTQKYRSYQGEVGHIADNLLQ RDFTATQPNEKWTTDITEFKCAEGKLYLSPIKDLFNNEIIAYDLARSPNF EQITRMMKQAVARLEGAKPILHSDQGWQYQMIGYQNILRENGIQQSMSRK GNCLYNSAMESFFGRLKTECYYGKRFETFEQLEKTIHEYIHYYNHERIQG KLKGLSPVNYRTQSLN >gid:853329 HI1740 ATP-dependent DNA helicase (recG) MSLELLDAVPLTSLSGVGAAISNKLAKIGIHNLQDLLFHLPIRYEDRTRI TLIANLRPEQYFTIEGIVQTCEVAFGRRPILSVSLSDGTSKIMLRFFNFN AGMRNSFQVGVRVKAFGEVKRGRHMPEIHHPEYQIVRDNAPIVLEETLTP IYSTTEGLKQNSLRKLTDQALALLDKVQIAEILPNEFNPHQYSLKEALRL LHRPPPDISLEMLEQGKHPAQQRLIFEELLAHNLAMQKVRLGTQQFSALP LHYQTDLKQRFLATLPFQPTNAQKRVVSDIEQDLIKDYPMMRLVQGDVGS GKTLVAALAALTAIDNGKQVALMAPTEILAEQHANNFRRWFKPFGIEVGW LAGKVKGKSRQAELEKIKTGAVQMVVGTHALFQEEVEFSDLALVIIDEQH RFGVHQRLMLREKGEKAGFYPHQLIMTATPIPRTLAMTVYADLDTSIIDE LPPGRTPITTVVVSEERRAEIVMRVKNACVNEKRQAYWVCTLIDESEVLE AQAAEAIWEDLTKALPMLNIGLVHGRMKPQEKQDVMMRFKNAELDLLVAT TVIEVGVDVPNASLMIIENAERLGLSQLHQLRGRVGRGCTASFCVLMYKP PLGKVSQKRLQVLRDSQDGFVISEKDLEIRGPGEVLGTKQTGIAELRVAN LMRDRKMIPTVQHYAKSLIQKYPDVAESLIRRWLNNKEIYSNA