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# Streptococcus pyogenes phage 6180.4

>M28_Spy1698 transposase
MTTMIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKE
MEDFIEMNEPLFATYVDLSEGCPSHDTLERVISLVNTDRLKELKVQFEQS
LTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEE
KSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKG
NQETLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDI
KWLCQNHPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANC
VRGHWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNFIRKMCLYFLKVMVF
PKKDLSYRRKQRYISVHLEDYLVQLFGERG
>M28_Spy1291 hypothetical protein
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKAD
NPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGK
WLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQ
RVIVPMTSALRQEVKELAAEMQEVYQSQMLPKAAYFKNCQLCSLVDICKP
RLSKKTRSVSRYINEAMTSEEMDL
>M28_Spy1079 site-specific recombinase
MSKEKIKVYLYTRVSTSIQIEGYSLEAQKSRMKAFAIYNDYEIVGEYEDA
GKSGKSIEGRKQFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQ
IMQDYGVNLICVEDGIDSSKDAGKLMISVLSAVAEIERENIRIQTMEGRI
QKAREGKWNGGFAPYGYKLEDGKLFINEEEAVAIRTIFDQYVNTTIGANG
LSKYLENHGIRKIPRQNGKNPLFDAGLIRKILKNPVYNGKIAFGRRTLEK
VHGTRNEYKQVEQDEYLISEGIHEAIVSDEVWQAAQVKLKSQAKKYEHVN
KGKDTRTHLLSGIVKCPICGAGMFGNKCTKKKKDGTKYKDFYYYGCKHRQ
MIRGHKCTFRKQIREELLDDAVAEVIVKIVSNPKFASMMQEKINMKVDTS
EIEKEIDNYQKELRKSHSTKFKIIEEIDNLDVEDKHYKRRKQDLDDRLYR
MYDKIDELESSLIDAKAKKQTIEAEKLTGDNIYKVLIYFDKLYKVMNDVE
RRQLITALISEIQVYEEKQPNGQWLKSITFKLPIIDDDLNISLDNNEQVE
CVSLLEKRS
>M28_Spy1303 DNA integration/recombination/invertion protein
MATYRQRGKKKLWDYRVYGKDGKLIASGSGFRTKKEASYEALKIEQKKYY
SDVINSNATLFEMWQIWYDLVVEPSELDILTKQKYQARGKIIEKYLSDIP
ANRIKHSKYQEFIKFYGKNVTLNLMTCLNSDIRKVIIFFKRDGVLIEDFT
EGVKIFGKPYRKSPEDKYLKSIEDYQKLLAYLKRIANYSDSIIPFFLFTM
LQTGFRFGEAMAITWDDIDFERNSIYTYRRYSSIKKDFTKPKTRTSIRRV
PVSHDLKELLLELKFQQERMLRGLHIKNTDQLIFYDYRFGMISNNAVNKF
LASSLEKLEIESKMSSTGARHTYGSYLLANGVDIWAVAKLMGHKDIKQLI
ETYGHLLLEVEEKENDQLLKILNNKGSF
>M28_Spy1266 phage protein
MVKFTIPIEPKPQKRPRFSRWSGAYEDKDMMAWRKQVTDYVKNNYEGPYF
DDGLKVDVTFYLKAPELVSKKPSERARDKTKQKYQDYINELLYVPKKPDL
DNLEKAVYDSISKSEVVWTDDNIIVEHTTRKLYSPNPRIEVKINEL
>M28_Spy1290 hypothetical protein
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYL
GVSPALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDR
EESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALE
MVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDC
VNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGCASLALDLVEEF
RSYIVDRFVFSLINKGQLQKKHFEVKENGSILMTENGRAIFIDLWQKRKH
TEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>M28_Spy1789 DNA integration/recombination/invertion protein
MERFMIMKITEHKKKNGTIVYRASIYLGIDQMTGKRVKTSITGRTRKEVN
QKAKHAQFDFLSNGSTIKRKVVIKTFKELSHLWLETYKLTVKPQTYDATV
TRLNRHIMPTLGNMKVDKITASDIQMLINRLSKYYVNYTAVRSVIRKVLQ
QGVLLGLIDYNSARDIILPRKQPNAKKKVKFIDPSDLKSFLEHLETSQHK
RYNLYFDAVLYQLLLSTGLRIGEACALEWGDIDLENGTIAINKTYNKNLK
FLSTAKTQSGNRVISVDKKTLRSLKLYQMRQRQLFNEVGARVSEVVFATP
TRKYFNASVRQSALDTRCKEAGIERFTFHAFRHTHASLLLNAGISYKELQ
YRLGHANISMTLDTYGHLSKDKEKEAVLYYEKAMNNL
>M28_Spy0352 phosphohydrolase
MKFEEKTLKRQTVFDGHIFKVVVDDVELPNNLGQSKRELIFHRGAVAVLA
ITPERKILLVKQYRKAIERVSYEIPAGKLEIGEEGSKLKAAARELEEETA
YTGTLTFLYEFYTAIGFCNEKITLFLATDLTQVANPKPQDDDEVIEVLEL
TYQECMDLVAQGKLADAKTLIALQYYALHFGGEQ
>M28_Spy1833 phosphohydrolase
MKDLLKQYQAKPLGEEKRYAVFLPLILVNDDWHVLYEVRSQHISQPGEVS
FPGGQVENQETLQEAAIRETVEELTVDASQIQLWGEIDYLVQSSRTIHCF
VGQLVVDDWKSIQPNEEVDKVFIVPLRQLLFTDPVYYRLEATPIETTDFP
FDRIRNGKYYQFSQEYRSIPFYENLEETIWGMTAQFTKCLTDILNDESIA
KKNPSDIENSKGR
>M28_Spy1274 DnaD-like protein
MMKKKGEALDKKELFDNFQNNWMRLLSPFEIEDINKWIDEEKMPVEVVNE
ALKSTILYNAPNLRYLNRVLNNWKRQGIDTVEKVEFARLQFENKKLSQNK
NHQSNVPSWSNPDYKEPDLKEFALGSIDGIEDGSGDF
>M28_Spy1864 DNA integration/recombination/invertion protein
MNIKEYKKKNGTIIYRTSVYLGVDQVTGKKARTTITASTKKGVKIKARDA
LNNFAMNGYTVKEKPTVTTYKELTALWWESYKNTIKPNSRQSMEGIVRLH
ILPAFGDCKLSKLTTPVIQQQVNKWANNANKGIKGAYANYSFLNNINRRI
LQYGVTMQVIEHNPARDVIIPRKQNNKEHKVKFFSNQELKQFLNYLDDLD
LSSYENFFDYVLYKTLLATGCRIGEVLALEWSDIDLKKGTIKVSKTLNRY
QETNTPKSKAGLRDIEIDRATVLLLKQYKNRQQVLSWDLGRSETIVFTPF
TTKYAYACLLRKRLQKHFKAAGVPDISFHGFRHTHATIMLYAGIEAKDLQ
YRLGHSNISMTLNTYVHATKEGAKKAVSIFETAISNL
>M28_Spy0163 transposase
MSRKGNPYDNALMESFYKTLKRELVNDAHFATIEQAQLEIFKYSETYYNP
KRLHSALGYLSPVEFEKIVTH
>M28_Spy1140 DNA polymerase III, delta subunit
MIAIEKIEKLSKENLGLITLVTGDDIGQYSQLKSRLMEQIAFDKDDLAYS
YFDMSEAAYQDAEMDLVSLPFFAEQKVVIFDHLLDITTNKKSFLKEKDLK
AFEAYLENPLETTRLIIFAPGKLDSKRRLVKLLKRDALVLEANPLKEAEL
RTYFQKYSHQLGLGFESGAFEQLLLKSNDDFSQIMKNMAFLKAYKKTGNI
SLTDIEQAIPKSLQDNIFDLTRLVLGGKVDVARDLIHDLRLSGEDDIKLI
AIMLGQFRLYLQLAILAKEGKSEQQLVTSLSEILDRRVNPYQVKYALKDS
RTLSLAFLTGAVKTLIETDYQIKTGLYEKSYLVDIALLKIMTHSQK
>M28_Spy1172 exodeoxyribonuclease VII large subunit
MKGGLMADYLTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPTHQYF
SLKDESAVIQATMWAGVYKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVI
EKAEPDGIGALALQFEQLKKKLTAEGYFEQKHKQPLPQFVSKIGVITSPS
GAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVVANIRRANQREDLD
LLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHETDTTLADFVA
DRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDK
LSQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHSL
ANSQLQTKIERYQDRVATAKRLLMANMASQYDSQLARFEKAQDALLSLDA
SRIIARGYAMIEKNQALVASVSQITKGDQLTIKMRDGQLDVEVKDVKNEN
I
>M28_Spy0752 transposase
MTTMIDFIISIDDCAVELDSRQSWKIGYPLSTILFLVFVCQLAGIETWKE
MEDFIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQS
LTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEE
KSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKG
NQETLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDI
KWLCQNHPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANC
VRGHWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNFIRKMCLYFLKVMVF
PKKDLSYRRKQRYISVHLEDYLVQLFGERG
>M28_Spy0859 DNA topoisomerase I
MGTKTTTKPKTGTKKSTTKKKSTAKKNLVIVESPAKAKTIEKYLGRSYKV
VASVGHIRDLKKSSMSIDFDNNYEPQYINIRGKGSLINSLKKEAKAAKKV
YLASDPDREGEAISWHLSHILGLDPQDNNRVVFNEITKDAVKHAFVEPRQ
IDMDLVDSQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQSVALKLIID
RENDIKAFVPKEYWSIDGLFKKGTKKFQATFYGINGKKTKLDNNNDVKEV
LAKLTNEDFLVSKVDKKERRRNAPLPYTTSSLQQDAANKINFRTRKTMMV
AQQLYEGIHLGENGTQGLITYMRTDSTRISPVAQNDAAQFIINRFGANYS
KHGNRVKNTSGAQDAHEAIRPSSVNHTPDSIAKYLNKDQLKLYTLIWNRF
VASQMTAAVFDTVKVNLEQNGVIFVANGSQMKFDGYMAVYNDSDKNKMLP
EMAEGETVKKISTSPEQHFTQPPARYSEATLIKTLEENGVGRPSTYAPTL
EVIQRRYYVKLSAKRFEPTELGEIVNKLIVEFFPDIVDVAFTAEMEGKLD
QVEIGEEQWQHVIDQFYQPFVKELNKAESEIEKIQIKDEPAGFDCDVCGH
PMVIKLGRFGKFYACSNFPECRNTKAITKEIGVTCPVCHKGQVIERKTKK
NRIFYGCDQYPDCEFISWDLPIGRACPKSGDYLIEKKVRGGKQVMCSNET
CDYKEEKIK
>M28_Spy0998 phage terminase small subunit
MGSLAYCLPHFLYLYYTHKQCRCQCKIRIKYTKGGDGKLSKLTLKQKRFA
DEYIISGNAMESAIKAGYSHNYSKAQSHKLLENVGIKEYLDERFEKMDSK
TIADQKEVLQYLSSVMRGEQQEKTLISIGELGQEIVDIDVGAKDRLKAAE
LLGKRYRLFTDKIEAEVQGTVVFVNEDDIPD
>M28_Spy1848 phage protein
MYKQTNKTYADILEKVEAATAQWIIRKKASSLKDDVIITDEDIQAEKERI
FIEKYGTALFDFKIDSYRKELDDLKIKAREQVNQFNDFVKELEQDDRYTE
RGKVDLYRAERKKAEKTLKEIGEAQHKLNVDIQKIEVESAQNAWKKLESE
MTPDSITPSEYQYLEMMLSRNDSDEMRKKLAEKFHYHLMVLEYLNADRKF
GEVIIKHPLEGVKNQSVNYIKIGDVRLPEVYESTYIHELLKHYKNDIYFG
ESYANHEWDEEQ
>M28_Spy0091 adenine-specific methyltransferase
MTLLFISSVIWYDKVMTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQ
NSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQTEQLQA
NHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSL
DYVGIELDDLLIDLSASIAEIMDSSAHFIQEDAVRPQLLKESDIVISDLP
VGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNL
LTSPQSQLLKQWLKDYAQVVTLITLPDSIFGHPSNAKSIIVLQKQTDHPM
ETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
>M28_Spy0774 DNA-cytosine methyltransferase
MRDMQFLDLFAGIGGFRLGLINQCHECIGFCEIDKFARQSYKAIYETEGE
IEFHDIRQVTDQDFRQLRGQVDIICGGFSLVKHFHSQADDWDLRALGELS
SLRLLERPNR
>M28_Spy0215 ribonuclease M5
MQKKRLLMQRGYLSLTEKINIQEVLVVEGKDDTANLRRFYEVDTYETRGS
AITEEDLERINRLNDLRGVIVLTDPDYNGERIRKLIMAAVPTARHAFLNR
NEAVPSSKSKGRSLGVEHANFEDLQKALAHVTQQYDDESYFDIRQTDLIR
LGLLMASDSRKRREYLGEKLRIGYANGKQLLKRLELFGITLAEVEEVMET
YEE
>M28_Spy1335 transposase
MYNHCITNCNTTQTKKKIVFPSEETLEHCLVTLFNDYNFKQEQRVHKGFG
HCTDTLESLFD
>M28_Spy1289 hypothetical cytosolic protein
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVD
IKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>M28_Spy0749 hypothetical cytosolic protein
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVL
STMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSET
VKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREG
HAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVSGCMTQ
FGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFS
DTFSYNGKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>M28_Spy0449 transposase
MLQSVLKDTKTKGQPMSTVKRYDEEFKQSLVNLYQTGKTQSELCKDYGVS
ASALAKWIKQYSQVKLEDNSVLTAKQIQELQKRNAQLEEENLILKKASAI
FMQNLK
>M28_Spy1105 DNA polymerase III subunit gamma/tau
MYQALYRKYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGK
TSAAKIFAKAMNCPNQVDGEPCNQCDICRDITNGSLEDVIEIDAASNNGV
DEIRDIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVV
FILATTELHKIPATILSRVQRFEFKAIKQKAIREHLAWVLDKEGIAYEVD
ALNLIARRAEGGMRDALSILDQALSLSPDNQVTIAIAEEITGSISMLALG
DYVRYVSQEQATQALAALETIYDSGKSMSRFATDLLTYLRDLLVVKAGGD
NQRQSAVFDTNLSLSIDRIFQMITVVTSHLPEIKKGTHPRIYAEMMTIQL
AKEEGVALPSGLSSDVTTEVEGLKRELNQLKQALAQLQASPSPSHAPVKP
AQAKPKLTTYKIDRVKILKIMEETVQDSQQSRQYLDALKTAWNEILDSIS
AQDRALLMGSEPVLANSENAILAFEAAFNAEQAMKRTDLNAIFGNIMSKA
AGFSPNILAVPKADFHHIRSEFALQLKTQKASDPTEETIEETLEIPEGFD
FLVDKINAVED
>M28_Spy1302 transposase
MTTMIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKE
MEDFIEMNEPLFATYVDLSEGCPSHDTLERVISLVNTDRLKELKVQFEQS
LTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEE
KSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKG
NQETLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDI
KWLCQNHPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPAVLTFANC
VRGHWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNFIRKMCLYFLKVMVF
PKKDLSYRRKQRYISVHLEDYLVQLFGERG
>M28_Spy0249 transposase
MRKQEQDHHKQDVNQKKPEEMTKLERLQEENEYLRTEVAYLKKPRNSV
>M28_Spy1392 methyltransferase
MKETFRLVATAAAGLEAVVGKEVRALGFDCQVENGKVYFEGDVEAIVKTN
LWLRAADRIKIIVGQFPARTFEELFQGVFALDWGNYLPLGAKFPISKAKC
VKSKLHNEPSVQAITKKAVVKKLQKHFHRPEGVPLQEVGSTFNIEVSILK
DQATIMIDTTGSSLFKRGYRVQKGGAPIKENMAAAILALSNWFPDKPLVD
PTCGSGTFCIEAALIGMNIAPGFNRSFAFEEWSWVDKDMVQQVRDDAEQE
ANYEIELDISGFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRTDKV
NGVVISNPPYGERLLDDKAVDILYNEMGQTFAPLKTWSKFILTSDELFEL
KYGQKADKKRKLYNGTLKVDLYQFYGERVKRHLI
>M28_Spy1072 transposase
MLLEILDLSRSTYYYQVKRLAQGDKDIELKHVIREIYDEHKGNYGYRRIH
MELRNRGFVVNHKKVQRLMKVMSLAARIRRKRKYSSYKGEVGKKADNLIK
RHFEGSKPYEKCYTDVTELALPEGKLYLLPVLDGYNSEIIDFTLSRSPNL
KQVQTMLEKTFPADSYSGTILHSDQGWQYQHQSYHDFLESKGILPSTSRK
GNSPDNGMMDSFFGILKSEMFYGLETTYQSLDKLEEAITDYIFCYNNKRI
KAKLKGFSPVQYRTKSFQ
>M28_Spy1277 phage protein
MIISKKVRRQSDSKEYYLLRLYHERGDKSMQSQLTYDLLKKQIAEELFDE
FKKLIQEKDLANQWVNQTTLVNEYGYSWQTIKRMESYGLKSFKNGKDKMY
CLADVNEIKHLMKQ
>M28_Spy0530 DNA integration/recombination/invertion protein
MKIYGDYHTHLFRHSHISFLAEKGIPLNAIMDRVGHSDPKTTLSIYSHTT
VNMKEIINKQTAPFMPLLKPE
>M28_Spy0717 mutator protein T
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECA
RREILEETHLTVTEMAFKGIITFPEFTPGHDWYTYVFKVTGFEGDLISDE
ESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYDQNNQL
MDKSVTFY
>M28_Spy1285 DNA integration/recombination/invertion protein
MMPISYLKISTPQRKERGKTMIEKYTKKDGTTAYRLRAYLGVDPVTGKQV
RTTRQGFKTEREAKRAEVKLIDDFQRQGAWKSNDKTTFDDVAKLWFEQYQ
NTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFVNCLSRYSGYT
LYLSLANRIFKFAVNLGIIDNNPMNKTLRSKCTYKNVDTLTKKYYTKEEL
NTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFDFRNNTISIT
KTIAYTKEGWAVQSPKTKKSNRTISMDAETMSLAKLYIKQSIKPLHGSFK
LFNFASDTVRKRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQE
RLGHAKIAITMDLYTHLSKKSKDNVADKLAELVAI
>M28_Spy0536 transposase
MVTAFPCNSFVLELADKALSAIIRQSTSKRISDKRGIYLVEKLVSLAKQS
YFTVTKTSPMIEEVRYYAKELLRLSERRQAIFDKMVALAQPLPEDKILRS
IPSIAETTATSIIGELGAIRRFQSANQINAFIGIDFRHYESGNYLAQEHI
TKRGNPYASKILFKCIHDIAFASHTNPCHIADFYEKRKRQSQTASTKPHT
IASRHCLVRQCFTS
>M28_Spy0377 phosphohydrolase
MAIMRKNTNIVKRDHMPQDYISYIRSKVGHDKIILNFAGGILTNDDGKVL
MQLRGDKKTWAIPGGTMELGESSLETCKREFLEETGIEVEAVRLLNVYTH
FEEVYPNGDAVQTIVFIYELTAVSDMAIDNFHNEETLKLQFFSHEEIAEL
ESVSAKHRLMLEEYFSDSFAMGH
>M28_Spy1780 hypothetical protein
MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVK
QYQVEQFVIGLPKNMNNTNGPRVDASITYGNHIEHLFGLPVHYQDERLTT
VEAERMLIEQADISRGKRKKVIDKLAAQLILQNYLNRNF
>M28_Spy0339 transposase
MLLLLNNIFKTALNTLMRYKNYVTNVIELPCSNAKLEATNKLIKHIKRNA
FGFRNFDNFKKRIYLALNITKEKTSLVSSRV
>M28_Spy0164 transposase
MSVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQG
SQYTGA
>M28_Spy1334 hypothetical protein
MSTVAVRVDDQLKDDATELFQSLGLDMSTAVKMFLIQSVKTQSIPFEIKN
QSSVSDEEFQNLVETKLKGIRVKASDPESVNAFFGDEDFSEYEEYFK
>M28_Spy0296 DNA integration/recombination/invertion protein
MKSYIEPFIASKALSQNSQKAYRYDLQQFCQLIGERVNQDKLLLYQNSIA
NLSLSAKKRKLSTANQFLYYLYQIKYLNSYFRLTDTMKVMRTEKQQAAII
NTDIFYQKTPFVWGQLISLLILELGLTPSEVAGIEVANLDLNFQMLTLKT
KKGVRVLPLSQILIPFLEQQLVGKEAYLFEHRGIPFSRQWFFNHLKTFVR
SIGYEGLTAQKLREQFILKEKLAGKSIIELSDILGLKSPVTLEKYYKS
>M28_Spy0444 RelB-domain protein
MSLQKRRITMAKTGTLNLRVDDSVKSAADDILKRLGIPMSTAIDMFLNQI
ILTGGIPFDVSLPEAPQRVNVDYMSQEKFYDKLIFSFEDAKTGNRKDVRE
FLSQLKENA
>M28_Spy0032 hypothetical protein
MICLMRWRSFRMYLKYIFKIKDRNLVSDYESLVRNLTINLQKLVIKDRTA
LIGDKQLPITIYYRGENEKFPTGIVKVESDSVEGLELFDKTIKEIVGNES
RFGKFTCIYDGISTYYSTEIYSELHEIERRTQEFLREAFFLSDKSGELKE
YQATIKKMDSSDFSFSKLINEIFKASDITDTFIDHVRACVEFGTVPNGDL
LPKSFWDSLDDSLLDDKEQGLEINNLLNEIRSTRNTIAHCKEFKKKDYIN
CIEQVKKLKQALDKIIASIESTDISKMSREVSRINNSLQADNDYIKQKYF
IEYDIFEKDILARTGLLEIDWENVSDDIEPLKIHRNFYESISEKTDSEVI
EEIKNLEDINFTDEKGNDLDDLTIIVPAQDEGFKRVFLGQREWYDIRIGK
SKRNRIKYIAGYEVAPESGVKYWAEVDKIVPSDNYVGYWKVIFKGEVKEY
SEYKRLGNTWPPQNSRYVSKKALDEAKYLSDVF
>M28_Spy0340 transposase
MAVAETSLVQKNCQISEPLRQKVAQTLVNRGALTNIAQQSAISSSTVYRK
LNQFVIKEDFSKLPEVLSWDGFSYQKGELAFIAQDFESKKIISILDNRRQ
TTIRNHFFRYSKEARNSVKIVTVDMSGSYISLIKKLFPQANIVLDRFLLF
ST
>M28_Spy0373 uracil DNA glycosylase superfamily protein
MDDLTKAIMADEANLSYTERGIFPLYDAPQTARLIIVGQAPGIVAQETKL
YWNDRSGIRLRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREG
FAAKWHPPLRALMPEVELTILVGRYAQDFYLGNKAYKTLTETVRHFEDYL
PDYFPLVHPSPRNQLWLAKNPWFEQDLLPILQKRVEAILTK
>M28_Spy1684 ATPase, AAA family
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGI
GKTSIASAIAGTTRYAFRTFNATIDSKKRLQEIAEEAKFSGGLVLLLDEI
HRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPL
SNEDIKTAIQLAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLD
LAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHYDVLSALQKSI
RGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTA
LDAAQRIGFPEARILIANVVIDLALSPKSNSAYLAMDAALADLRTSGNLP
IPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD
>M28_Spy0857 ribonuclease HII
MATDARLGVQKALKSRQKAIQADLAEEERLEAMLSYEKALYKEGYQAIAG
IDEVGRGPLAGPVVAACVILPQHCKIKGLNDSKKIPKSKHETIYQAVKEK
ALAIGIGIIDNQLIDEVNIYEATKLAMLEAIKQLEGQLTQPDYLLIDAMT
LDIAISQQSILKGDANSLSIAAASIVAKVTRDQMMANYDRIFPGYGFAKN
AGYGTKEHLQGLKAYGITPIHRKSFEPVKSMCCDSTNP
>M28_Spy1321 transcriptional regulator, Cro/CI family
MNPMYLKKFRKKSGLKQKEFAKCIGISQAMLSQYESGKKKLSLEKFQEMK
THFGYLTDNDSSRLQVTIDYVRITLKSVRDLEFFCRNFLHCRFKEFSSVE
SKLMNYNHIWKRGDIWIFDYADKHDTGNYQITLQLSGQGCRQLELLMEQE
NFAWLDWLIYLRRSYRDEMNVTRFDLAIDELYLGKDRENEHFLLSDMIAK
YYHHELAFESLRTWNYIGGGALNFNDMEEIEQNRQGISLYFGSRQSEMYF
NFYEKRYELAKLEGISVEESLEIFEIWNRYEIRLSQSKANAVVDEFISGI
PLGEIARGLINSKIQVYDGKNKYGAFMADQKWQMMFGGVEPLTFVTRPES
YNIERTIRWLIHQVSDSLAMVSEYDSMIDGDNLQMIINSGEVNERGEKIL
ETIRYNLGLDKGA
>M28_Spy0170 transposase
MGCYFFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDR
YGVTIVQKCKNNYYSPELKQEIINKVLIDGQSQKQTSLDYALLTSSMLSR
WIAQYKKNGYTILEKPRGGPSKMGRKRKKNLEEMTEVERLQKELEYPRAE
NAVLKKLREYRLRDEVKLKEQQKSFKH
>M28_Spy0169 transposase
MLLEILDLSRSTYYYQVKRLAQGDKDIELKHVIREIYDEHKGNYGYRRIH
MELRNRGFVVNHKKVQRLMKVMGLAARIRRKRKYSSYKGEVGKKADNLIK
RHFEGSKPYEKCYTDVTELALPEGKLYLLPVLDGYNCEIIDFTLSRSPNL
KQVQTMLEKTFPADSYSGTILHSDQGWQYQHQSYHDFLESKGILPSMSRK
GNSPDNGMMDSFFGILKSEMFYGLEKSYKTLDKLEEAITDYISYYNNKRI
KAKLKGLSPVQYRTKSFQ
>M28_Spy1104 transposase
MTTMIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKE
MEDFIEMNEPLFATYVDLSEGCPSHDTLERVISLVNTDRLKELKVQFEQS
LTSLDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEE
KSNEIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKG
NQETLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDI
KWLCQNHPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPAVLTFANC
VRGHWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNFIRKMCLYFLKVMVF
PKKDLSYRRKQRYISVHLEDYLVQLFGERG
>M28_Spy0381 transposase
MASLETTENLLTFYQFPHHIWSSIYSTNLIESLNKEIKRQNKKRVVFPNE
EALERCLVSIFEDYNIKFGARIHKGFGACFDTLDSLFD
>M28_Spy1896 transposase
MENKPSSTPISLIVGNVSIKPIDLPKVVSIRKRSKKVMKTNKKTLGKSIE
ERPEYINDRSEFGHWEIDLVLGKKTKSEAVMLTLVERQTRYALGVKLEDK
QSQTINRAVTHLISQYPIASITADNGSEFSLLSDLKAVDVYFAHPYSSHE
RGTSENFNGLLREYVPKGVSLNPLTSEELDNDITAINERLRRLLQ
>M28_Spy0166 transposase
MPRKTFDKAFKLSAVKLILEEEQSVKMVSSTLEIHPNSLYRWIQEYEKYG
ESAFPGHGSALRHAQFETKKLEKEHKLLQEELALLKKFQVFLKPNRK
>M28_Spy1632 DNA integration/recombination/invertion protein
MPVMGELPINKTSPLDCQNFITDKAKTFKNIKQIKSYTEKIFDFAIKMKL
LKHNPMAEIIMPKRKKTRIENYWTVQELQEFLAIVLQKEPYKHYALFRLL
AYSGLKERRAMRS
>M28_Spy1146 hypothetical protein with endo/excinuclease domain
MTTKKAYMYVLECADKTLYTGYTTDLKKRLATHNAGKGAKYTRYRLPVSL
LYYEVFDSKEAAMSAEALFKKRKTRSQKLAYIATHQKEKKNH
>M28_Spy1206 methyltransferase
MRVVSGEFGGRPLKTLDGKITRPTSDKVRGAIFNMIGPYFNGGRVLDLFA
GSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEA
ERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDK
TVLLPKEIATLGIWKEKIYGISKVTVYVN
>M28_Spy0382 transposase
MCKHTKRNKSCIVELRHFTRKRFIPMTQFTTELLNFLAQKQDIDEFFRSS
LEIAMNDLLQVELSAFLGYEPYEKEGYNTGNSRNGTYSRQFETKYGLVNL
IIPRDRNGEFSPVLLPSYARRDDHLEEMVIKLYQTGVTTREISDIIERMY
GHHLFLNGSLVIKRSWHHLKRRKISLLSINSHITFGLAFTLQT
>M28_Spy1406 ATP-dependent RNA helicase
MSFKDYHFKQYVQQALEEIGFVNPTEVQKRLIPIVNSGRDLVGESKTGSG
KTHTFLLPIFEKLDEAKAEVQVVITAPSRELATQIFDACKQIAKHFQEEI
RLANYVGGTDKLRQIEKLKGSQPHIVIGTPGRIYDLVKSGDLAIHKATTF
VVDEADMTMDMGFLDTVDKIAASLPKSVQILVFSATIPQKLQPFLKKYLT
NPVIEQIKTKTVIADTIDNWLVSTKGRDKNGQLLEILKTMQPYMAMLFVN
TKERADDLHAFLTANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGMAGTAITLYQPSD
DSDIKELEKMGIAFTPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGL
VKKKKKKVKPGYKKKIQWAVDEKRRKERRAENRAKGRAERNAKKQHF
>M28_Spy0440 chromosome segregation ATPases
MLIEMWSPVFKNHGEIRESICFHYGLNVIMGMDLADNSIGKSSSLLAIDF
IFGGNSYLKSIAVKKLGDHPIYFCFQFEKKFYFSRDTANPDIILVCDKSY
SPTGETMDLGIFLNKLKKRYHLDSPELSFRLAMSGFFRIAGKSNQNTDFP
LQVYSSQKSSESITTLIQLFNLYDNIARYKERLKDKSDQLTTFRNARKYT
FISNLVGGKKQFEANVSEIKRLEYDLAHLQDTHQDKIDSDDIEKNQQKLQ
LRNTKLELESSLRDKQRRLKLLDISIEFGLYPTESDLTELQQYFPDTNLK
KLYEVEAYHKKLETILDSEFSTERESLIAEIDELESQLTTLNQELQELGN
IPNLSSEYLESYSKLTATINALKEQNEAYLKESGLSKEKSEADADLKRST
EDILLDLEVKINSKMREFNNILYPDIRKAPQINLNAHNSYSFYTPDDDGT
GTKFKGMIVFDLVMLYLTNLPALTHDSLLLSNVSYQATEALLKLYDQSRS
LNKQVFLAFDKASSYSPDANQLLSENTVLRLSSNGNELYGISWNKGENSD
EI
>M28_Spy1633 DNA integration/recombination/invertion protein
MIEIGVDPVNTAKRLGHASSQITLDTYSHATAVGEDKSIKQFANYLKNN
>M28_Spy0632 cell surface protein
MKKHLKTVALTLTTVSVVTHNQEVFSLVKEPILKQTQASSSISGADYAES
SGKSKLKINETSGPVDDTVTDLFSDKRTTPEKIKDNLAKGPREQELKAVT
ENTESEKQITSGSQLEQSKESLSLNKTVPSTSNWEICDFITKGNTLVGLS
KSGVEKLSQTDHLVLPSQAADGTQLIQVASFAFTPDKKTAIAEYTSRAGE
NGEISQLDVDGKEIINEGEVFNSYLLKKVTIPTGYKHIGQDAFVDNKNIA
EVNLPESLETISDYAFAHLALKQIDLPDNLKAIGELAFFDNQITGKLSLP
RQLMRLAERAFKSNHIKTIEFRGNSLKVIGEASFQDNDLSQLMLPDGLEK
IESEAFTGNPGDDHYNNRVVLWTKSGKNPYGLATENTYVNPDKSLWQESP
EIDYTKWLEEDFTYQKNSVTGFSNKGLQKVKRNKNLEIPKQHNGVTITEI
GDNAFRNVDFQNKTLRKYDLEEVKLPSTIRKIGAFAFQSNNLKSFEASDD
LEEIKEGAFMNNRIETLELKDKLVTIGDAAFHINHIYAIVLPESVQEIGR
SAFRQNGANNLIFMGSKVKTIGEMAFLSNRLEHLDLSEQKQLTEIPVQAF
SDNALKEVLLPASLKTIREEAFKKNHLKQLEVASALSHIAFNALDDNDGD
EQFDNKVVVKTHHNSYALADGEHFIVDPDKLSSTMVDLEKILKLIEGLDY
STLRQTTQTQFRDMTTAGKALLSKSNLRQGEKQKFLQEAQFFLGRVDLDK
AIAKAEKALVTKKATKNGQLLERSINRAVLAYNNSAIKKANVKRLEKELD
LLTGLVEGKGPLAQATMVQGVYLLKTPLPLPEYYIGLNVYFDKSGKLIYA
LDMSDTIGEGQKDAYGNPILNVDEDNEGYHALAVATLADYEGLDIKTILN
SKLSQLTSIRQVPTAAYHRAGIFQAIQNAAAEAEQLLPKPGTHSEKSSSS
ESANSKDRGLQSNPKTNRGRHSAILPRTGSKGSFVYGILGYTSVALLSLI
TAIKKKKY
>M28_Spy1871 phosphohydrolase
MIVRNGKNFLTRDAADQYYTIGGTSLVGEKTHETVLRETLEEVGIRTKVN
QLAFVVENHFDIDDVFWHNIEFHYLVSPLEDPKLEMIENASDRFVNGFQS
INWIK
>M28_Spy1071 transposase
MGCYFFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDR
YGVTIVQKCKNNYYSPELKQEIINEVLIDGQSQKQTSLDYALPTSSMLSR
WIAQYKKNGYTILEKPRGRPSKMGRKRKKNLEEMTEVERLQKELEYLRAE
NAVLKKLREYRLRDEVKLKEQQKSFKH
>M28_Spy0165 transposase
MNSHHTCQTLQVSRSGFYAYLKRRLSSKHVENEALKEMIKDIFYEHKERY
GSVRITQELCRRGIHVNHKRVGRLLHQLGLYAKGSRYQYKYYNRRRSS
>M28_Spy1014 phage DNA/RNA helicase
MMIVSPPGSGKSVVISDIAKSATQKNGHVLFLVHRKELIDQITNSFKFHG
IDMNKVDLMTVGKAKNRLDKLTKPTLIITDEGHHGKASTYQIIYEYFSDV
PRIGFTATPWRLSGDGFTDTYDVMVLGKTVEWLINNNKLAPYDYYSVLSI
DTAKLKVQNGDYSNKSIDESFGKKIFGDVVQEYIKKANGQKAILYAHSVE
ASQAFAKEFQSMGINAIHADAKTPKAKRDKIMKDFRDGKIQVICNVDLIS
EGFDVPDCTVTILCRPTKSLVLFLQQSMRSMRYQPNKKAIILDHVGNWNI
HGLPDTPHHWENYFRGGWKKKSNKTNTVHAKECSVCSALWPLSQQLCELC
NHDFGLKEKQEKERIEAELELIKRERFRIKQLANKKFGKDLKTNWEIAQA
RVKDAGKGKPLYKLIYFYLKTDWVETNVNELAEVTGKSEKEIYSAYNWLK
KKLRG
>M28_Spy0448 transposase
MDNQIYRKQILEIYTKANKRLGVKSIKVILQRDYDTKISEGRIYRLMKNM
ALPKMATVKPKTALKRTQKTYPQNLLNQKFNPDKPNQVWSTDFTYISIGY
KKYVYLCAILDLYSRKCIAWKLSHHMDAKLACDTLELALNKRKIEGTLLF
HSDQGSQFKARKLRKIIDDNTIMHSFSKPGYPYDNAVTEAFFKYLKHRQI
NRKKYQNIKQVQLDCFEYIENFYNNYNPHTANLGLTPNQKEEN
>M28_Spy1162 DNA-binding protein HU
MANKQDLIAKVAEATELTKKDSAAAVDAVFSTIEAFLAEGEKVQLIGFGN
FEVRERAARKGRNPQTGAEIEIAASKVPAFKAGKALKDAVK
>M28_Spy1083 nickase
MSYNDHNATNKRKRRVLSKSKKEYILDEKGEKILNKNGKPKTRKAELTIW
NDKGNVEKWRENFSDLCNEYLAKNKIEKRVDHRSFKRQNSDYLPTIHLGS
AASAMERKGIETDKGNYNREIRKYNDLVKTIKEEIKTLKGWIGNLLDNLS
TAYEKFKDIERDKVIDNPKLFNLTNYLLTYSEIQKEKSKYLKGYAKTNKE
KYDFKKLTSAYSYLRKNNIETIGQLQTKIETLKSNSYKLNKKAKTIHKEM
EDVEKKILYYEIYKAKKGVYEEYQKKNIFTKDTFYNKHKKDIDQYKVVSG
KLKKLLSDKEKLSPKKWNEEKNLLMVNLEEINKEKDKIKDEYQEINHIKY
SVDFVNKELGIDLSIEIDKLIKQGEKPSVIAQIKKFQDQVNKDNEYRESM
KNKKMDQER
>M28_Spy1552 ribonuclease HIII
MNTLVLKIDAILSKHLKKQLAPYTISSQNIYVAFAAKKNGVTVLLYKSGK
LVLQGNGANALAQELNLPVAKTVFEASNNSQDIPIIGSDEVGNGSYFGGI
AVVASFVDPKDHPFLKKLGVDDSKKLSDKTIQQIAPLLEKQIPHQSLLLS
PKKYNELVGKSKPYNTISIKVALHNQAIFLLLQKGIQPKQIVIDAFTSQS
NYEKHLKKEKNHFPNPLTFQEKAESHYLAVAVSSIIARNLFLDNLDQLGQ
DLGYQLPSGAGSASDKVASQLLAAYGMSSLEYSAKLHFANTHKAQALLTK
>M28_Spy1086 hypothetical protein
MKKLEQIRKESKEIKNKIDDTEERLRQLKNQEKKILKQDIEKRRKERTHR
LITRGAILESLIENAEELTDEEIKILLEEAIKTKEFKETLKLMREN
>M28_Spy0793 integrase pseudogene
MKVHTTLEKDENGNWYRKDQTKTPAGERLIELDDVTIVVLENWRRNQVVN
TDTDFIISRFGEPFCKSTICRVIKHKAQEVGVPVITGKGLRHSHASYLIN
VLKKDILYVAKCMGHADKSTTLNTYSH
>M28_Spy0855 hypothetical cytosolic protein
MIFPSLPYWKDLPDLDLYLDQVLLYVNQCTDFSEVSDNKSLTASMINNYV
KHGYVTKPIKKKYQKQQLARLIAISLFKTVFPIQDISRVLEELQAQADSE
SLYNTFVTCWNQKAPIEEDIPPIVQVACQTVKDYHKTIYLLQEVIQ
>M28_Spy1812 phage protein
MSKKNAIRKLKEFHRWQRIANSLDLTYTELYQFDIEYHPTRRKHLEISRE
CALEELDAIRYAINQLSKVEYRQILIECYLISEEKTQQDIMEELNRSQSW
YYESKKRALLEFVEFYRDGALKNNVRL
>M28_Spy1033 DNA integration/recombination/invertion protein
MYLFYQIERWYAMKIKSYKKENGETAYKFLLYAGYVNGKRKYIRREGFKT
KQAARETLISLQAELDKPKSSMTFGVLTKQWLNEYEKTVQGSTYLKTERN
INKHILPKLDKVKIGDINPLLIQRLTEEWCNDLKYGGKILGLVRNILNLA
VRYGYINNNPALPITPPKIKRKRKMNNNFYTLDQLKQFLELVEKTDNIEK
IALFRLLAFTGIRKGELLALTWDDLNGNTLSINKAVTRTQVGLEIDVTKT
KSSDRLISLDDETLEILQELHETFPTSTLMFQSESGGIMTPSLPRKWLLQ
IIKGTDLPQITIHGFRHTHASLLFESGLSLKQVQHRLGHGDLQTTMNVYT
HITQSAIDDIGTKFNQFVTNKQLD
>M28_Spy1143 comEA, ComE operon protein 1
MLDELLIKGKSFLRERYFLPYLISLLLGLFLILSFSFLFWGNRQSKAAVP
ALREISPVKQQVSEEKKEIQEDSSILVDLKGAVQKEGVYKLTASSRVRDV
IELAGGLTSEADKHAINFAEKLTDEQVVYVPKQGEEISVLPRSLVSGKKE
TASKDQSKVHINKASLEELQHIPGIGAKRAQDIIDMRDKLGGFKALEDLR
QVSGIGEKTLEKLKDDIFLD
>M28_Spy1368 comFA, ComF operon protein 1
MESIENSYGRLLLESQLPDSAKQLAQPLKSVVISRGKMICQRCHYQLDEE
ARLPNGAYYCRFCLVFGRNQSDKLLYAIPPMHFPKGNYLVWSGQLTAYQE
MISQQLLINMQNQKTTLVHAVTGAGKTEMIYAAIEAVINTGGWVCIASPR
VDVCVEVATRLSQAFSCSICLMHAESLPYQRAPIIVATTHQLLKFHKAFD
LLIIDEVDAFPFVNNIQLHYAASQALKEGGAKILLTATSTRTLERKVNKG
EVVKLTLARRFNNRPLVIPKFIRSFNLFKMIHRQKLPPKILKYLKKQRKT
GYPLLIFLPTIIMAESVTAILKELLPAEQIACVSSQSQNRKEDITAFRQG
KKTILITTTILERGVTFPQIDVFVLGSHHRVYSSQSLVQIAGRVGRSIDR
PDGTLYFFHEGISKAMLLARKEIKEMNYKGYSHDLSTMSTN
>M28_Spy1148 deaD, ATP-dependent RNA helicase
MKFTEFNLSQDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTG
KTAAFGLPTLNKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKV
RSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALILDHVETLILD
EADEMLNMGFLEDIEAIISRVPADRQTLLFSATMPAPIKQIGVKFMKDPE
HVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPELSIVFGRTKR
RVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGY
LSMIENLTKKQMKPLRPATAEEAFQAKKKVALKKIERDFADETIRSNFDK
FKGDAVQLAAEFTPEELALYILSLTVQDPDSLPEVEIAREKPLPFKYVGG
GHGNKNGKGGRGRDNRNRGDRRGGYRGDRNRDERDGDRRRQKRDKRDGHD
GSGNRDFKRKSKRNSKDFFNKEKKSSAKNTGFVIRHKGE
>M28_Spy1110 deaD2, ATP-dependent RNA helicase
MNIETIVKGRRMITKFPPQWQEKLDQVAFTHLTPIQEQAFQPIVDGKNFL
GISPTGTGKTLAYVFPSLLALTPKKSQQLLILAPNTELAGQIFEVTKDWA
QPLGLTAQLFISGTSQKRQIERLKKGPEILIGTPGRIFELIKLKKIKMMS
VNTIVLDEYDELLGDSQYDFVQKISHYVPRDHQMVYMSATNKVDQTSLAP
NTFCIDLSEQTNDAIQHFYLMVDKRERTDLLRKFANIPHFRALVFFNSLS
DLGATEERLQYNGAAAVSLASDINVKFRKTILEKFKSHQLSLLLATDLVA
RGIDIDNLDYVIHFDVARDKENYTHRAGRTGRMGKSGIVITFVSHPEDLK
KLKKFAKVSEISLKNQQLHFIN
>M28_Spy0514 dinG, ATP-dependent helicase
MFCFIDIACYNRLTMTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGN
KIIDSYETDVNPHESLDEHIVHLTGITDKQLAKAPDFGQVAHHIYQLIED
CIFVAHNVKFDANLLAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLS
HLSRQLNIDLAEAHTAIADARATAILFLRLLQKIESLPIECLESLLAYSD
SLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKALKPYQISKSFP
INMALLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLL
AKEDQNQIIVSVPTKLLQDQLMAGEVAAIQEQFHIACHSLKGPANYLKLD
SFADSLDQNDQNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQL
KHDGDIKQSSEFYDYDFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFTR
NKVLVFDEAQKLMLQLDQLSRHQLNLTVFLQTIQAKLSNPLPLLEKRLLE
SLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATS
DGDYWLSSEKQEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISS
EVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIA
KRIESLKQEGYPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIK
KRFDQGEQTILLGLGSFWEGVDFIQADRMITLIARLPFDNPEDFFVKKMS
HYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTK
SYGQVILEGLGQEFLISQQNFHDCLVETDCFLI
>M28_Spy1556 dinP, DNA polymerase IV
MLIFPLINDTSRKIIHIDMDAFFAAVEERDNPALKGKPVVIGKDPRETGG
RGVVSTCNYEARKYGIHSAMSSKEAYERCPKAIFISGNYEKYRTVGDQIR
RIFKRYTDVVEPMSIDEAYLDVTNNKLGIKSAVKIAKLIQHDIWKEVGLT
CSAGVSYNKFLAKLASDFEKPHGLTLVLKEDALCFLAKLPIEKFHGVGKK
SVEKLHDMGIYTGQDLLAVPEMTLIDHFGRFGFDLYRKARGISNSPVKSD
RIRKSIGSERTYAKLLYQETDIKAEISKNAKRVAALLQDHKKLGKTIVLK
VRYADFTTLTKRVTLPELTRNAAQIEQVAGDIFDSLSENPAGIRLLGITM
TNLEDKVADISLDL
>M28_Spy0001 dnaA, chromosomal replication initiator protein
MTENEQIFWNRVLELAQSQLKQATYEFFVHDARLLKVDKHIATIYLDQMK
ELFWEKNLKDVILTAGFEVYNAQISVDYVFEEDLMIEQNQTKINQKPKQQ
ALNSLPTVTSDLNSKYSFENFIQGDENRWAVAASIAVANTPGTTYNPLFI
WGGPGLGKTHLLNAIGNSVLLENPNARIKYITAENFINEFVIHIRLDTMD
ELKEKFRNLDLLLIDDIQSLAKKTLSGTQEEFFNTFNALHNNNKQIVLTS
DRTPDHLNDLEDRLVTRFKWGLTVNITPPDFETRVAILTNKIQEYNFIFP
QDTIEYLAGQFDSNVRDLEGALKDISLVANFKQIDTITVDIAAEAIRARK
QDGPKMTVIPIEEIQAQVGKFYGVTVKEIKATKRTQNIVLARQVAMFLAR
EMTDNSLPKIGKEFGGRDHSTVLHAYNKIKNMISQDESLRIEIETIKNKI
K
>M28_Spy0277 dnaB, replicative DNA helicase
MMKPIDTFTYLKRNKVTLDSVTLIQLYFPIIGSDAVSIYQYFIHFFDDGL
QRHKFSDILNHLQFGMKRFEDALAILTAMELVSVYQLSDTYLITLHQPLS
RDLFFQHPAYSRLLEQKIGEVAVSELQVTVPSQARNISKRFSDIFGVQGD
LTNVPQKPQKNFDLSSFQQLMVRDGLQFEDNQKDIISLYSIAEQYDMTWF
DTYQIAKATAVNGKIRPERLLAKKNQSMTKPSKENFSQAEQIILREAKQD
SALVFLEKIKKARRATITKDERILLQTLAKMNFLDDVINVMVLYTFNKTK
SANLQKSYVLKMANDFAYQKVSTAEEAIVVLRAFTDRQSRRQSKVKTSQS
NVPKWSNPDYQETTSQEEQAKLDQFKQAALKRLENLGKGGD
>M28_Spy0709 dnaD, phage protein
MSFLEHYKSGNLVIPSALLFHYKDLFKSSDDFLVWQFFYLQNTTKRDDLA
PSQIAHALGKSVADINKIISSLTSQGLLDMRTIELTGEIEIIFDASPVLA
KLDQLFVSQTATEIDKQETPNHFKRLVDEFERELGRFLSPFELEDLEKTL
RDDKTDPDLIREALKEAVFNGKTNWKYIQAILRNWRKEGIVNLRQVEERR
RVREGEDLSQVTISEDFLSAMNLWSDS
>M28_Spy0962 dnaE, DNA polymerase III alpha subunit
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFI
KGCQKNGLQPVLGLEVEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSG
KLHMDYLCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKR
QLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLT
TFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEA
GLKEKGLWKEPYQSRLLRELVIISDMGFDDYFLIVWDLLRFGRSKGYYMG
MGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDI
YRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNL
TKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIH
AAGIVMSDDTLTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLT
FVQKMQEKVAKDYGCQIDIAAIDLEDPQTLALFAKGDTKGIFQFEQNGAI
NLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIA
PILEPTYGIMLYQEQVMQIAQIYAGFTLGKADLLRRAMSKKNLQEMQKME
EDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYF
KAHYPAVFYDIMMNYSSSNYITDALESDFQVAQVTINSIPYTDKIEASKI
YMGLKNIKGLPRDFAYWIVEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKI
GLFDCFEPNRKKIMDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSATEKY
SLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRI
IRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRI
KERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVI
HYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>M28_Spy0578 dnaG, DNA primase
MGFLWGGDDLAIDKEMISQVKNSVNIVDVIGEVVKLSRSGRHYLGLCPFH
KEKTPSFNVVEDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIIADKT
GMSLNIPPSQAVLASQHKHPNHALMTLHEDAAKFYHAVLMTTTIGQEARK
YLYQRGLDDQLIEHFNIGLAPDESDYLYQALSKKYEEGQLVASGLFNLSD
QSNTIYDAFRNRIMFPLSDDRGHIIAFSGRIWTAADMEKRQAKYKNSRGT
VLFNKSYELYHLDKARPVIAKTHEVFLMEGFMDVIAAYRSGYENAVASMG
TALTQEHVNHLKQVTKKVVLIYDGDDAGQHAIAKSLELLKDFVVEIVRIP
NKMDPDEFVQRHSPEAFADLLKQSRISSVEFFIDYLKPTNVDNLQSQIVY
VEKMAPLIAQSPSITAQHSYINKIADLLPNFDYFQVEQSVNALRIQDRQK
RQGQIAQAVSNLVTLPIPKSLTAIAKTESHLMHRLLHHDYLLNEFRHRDD
FYFDTSTLEILYQRLKQQGYITSYDLSEMSEEVNRAYYNVLEENLPKEVA
LGEIDDILSKRAKLLAERDLHKQGKKVRESSNKGDHQAALEVLEHFIAQK
RKME
>M28_Spy0278 dnaI, primosomal protein
MEKIGETMAKLGQNTRVNSDQLIQTILADPEVASFISQHHLSQEQINLSL
SKFNQFLVERQKYQLKDPSYIAKGYQPILAMNEGYADVSYLETKELVEAQ
KQAAISERIQLVSLPKSYRHIHLPDIDVNNASRMEAFSAILDFVEQYPSA
EQKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAI
SNGSVKEEIDAVKNVPVLILDDIGAEQATSWVRDEVLQVILQYRMLEELP
TFFTSNYSFADLERKWATIKGSDETWQAKRVMERVRYLAREFHLEGANRR
>M28_Spy0002 dnaN, DNA polymerase III, beta chain
MIQFSINRTLFIHALNATKRAISTKNAIPILSSIKIEVTSTGVTLTGSNG
QISIENTIPVSNENAGLLITSPGAILLEASFFINIISSLPDISINVKEIE
QHQVVLTSGKSEITLKGKDVDQYPRLQEVSTENPLILKTKLLKSIIAETA
FAASLQESRPILTGVHIVLSNHKDFKAVATDSHRMSQRLITLDNTSADFD
VVIPSKSLREFSAVFTDDIETVEVFFSPSQILFRSEHISFYTRLLEGNYP
DTDRLLMTEFETEVVFNTQSLRHAMERAFLISNATQNGTVKLEITQNHIS
AHVNSPEVGKVNEDLDIVSQSGSDLTISFNPTYLIESLKAIKSETVKIHF
LSPVRPFTLTPGDEEESFIQLITPVRTN
>M28_Spy1570 dnaQ, DNA polymerase III, epsilon chain
MTKALSGSFLEENMKHLDTYIAFDLEFNTVNDVSHVIQVSAVKYDHHKEV
DSFDTYVYTDVPLQSFINGLTGITSDKIAAAPKVEEVMAAFKNFVGELPL
IGYNAQKSDLPILAENGLDLRDQYQIDLFDEAYDRRSADLNGIANLRLQT
VATFLGIKGRGHNSLEDARMTAAIYKSFLETDTNKAYLSQQEEVTTDNPF
AALGDFFD
>M28_Spy0320 dnaX, DNA polymerase III, delta' subunit
MDLAQKAPNVYQAFQTILKKDRLNHAYLFSGDFANEEMALFLAKVIFCEQ
KKDQTPCGHCRSCQLIEQGDFADVTVLEPTGQVIKTDVVKEMMANFSQTG
YENKRQVFIIKDCDKMHVNAANSLLKYIEEPQGEAYIFLLTNDDNKVLPT
IKSRTQVFQFPKNEAYLYQLAQEKGLLNHQAKLVAKLATNTSHLERLLQT
SKLLELITQAERFVSIWLKDQLQAYLALNRLVQLATEKEEQDLVLTLLTL
LLARERAQTPLTQLEAVYQARLMWQSNVNFQNTLEYMVMSE
>M28_Spy0327 exoA, exodeoxyribonuclease III
MGARCPKSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRA
LLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWR
SSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFEDF
FVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTELDAQKPVLATGDYNVAH
KEIDLANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTW
WAQRSKTSKINNTGWRIDYWLASNRIVDKVKRSEMISSGERQDHTPILLD
IDL
>M28_Spy0396 fpg, formamidopyrimidine-DNA glycosylase
MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQII
QSVGRRGKYLLIDLGQLVLVSHLRMEGKYLLFPDEVPDNKHFHVFFELKN
GSTLVYQDVRKFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAAL
LSSQKPIKPHLLDQTLVAGLGNIYVDEVLWAAKVHPGTASSRLNKAEIKR
LHDETIRILALGIEKGGSTVRTYRNALGADGTMQDYLQVYGQTGKPCPRC
GQAIVKLKVGGRGTHICPKCQKKRP
>M28_Spy0848 gyrA, DNA gyrase subunit A
MQDRNLIDVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRRILYGM
NELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRHML
VDGHGNFGSMDGDGAAAQRYTEARMSKIALELLRDINKNTVNFQDNYDGS
EREPVVLPARFPNLLVNGATGIAVGMATNIPPHNLAESIDAVKMVMEHPD
CTTRELMEVIPGPDFPTGALVMGRSGIHRAYDTGKGSIVLRSRTEIETTQ
TGRERIVVTEFPYGVNKTKVHEHIVRLAQEKRLEGITAVRDESSREGVRF
VIEIRREASATVILNNLFKLTSLQTNFSFNMLAIENGVPKILSLRQIIDN
YISHQKEVIIRRTRFDKDKAEARAHILEGLLIALDHLDEVIAIIRNSETD
VIAQTELMSRFDLSERQSQAILDMRLRRLTGLERDKIQSEYDDLLALIAD
LSDILAKPERIITIIKEEMDEIKRKYANPRRTELMVGEVLSLEDEDLIEE
EDVLITLSNKGYIKRLAQDEFRAQKRGGRGVQGTGVNNDDFVRELVSTST
HDTLLFFTNFGRVYRLKAYEIPEYGRTAKGLPIVNLLKLEDGETIQTIIN
ARKEETAGKSFFFTTKQGIVKRTEVSEFNNIRQNGLRALKLKEGDQLINV
LLTSGQDDIIIGTHSGYSVRFNEASIRNMGRSATGVRGVKLREDDRVVGA
SRIQDNQEVLVITENGFGKRTSATDYPTKGRGGKGIKTANITPKNGQLAG
LVTVDGTEDIMVITNKGVIIRTNVANISQTGRATLGVKIMKLDADAKIVT
FTLVQPEDSSIAEINTDRENSISKNKDN
>M28_Spy0532 gyrB, DNA gyrase subunit B
MIEENKHFEKKMQEYDASQIQVLEGLEAVRMRPGMYIGSTAKEGLHHLVW
EIVDNSIDEALAGFASHIKVFIEADNSITVVDDGRGIPVDIQAKTGRPAV
ETVFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVRVYKNGQIH
YQEFKRGAVVADLEVIGTTDVTGTTVHFTPDPEIFTETTQFDYNVLAKRI
QELAFLNRGLKISITDKRSGMEQEEHFHYEGGIGSYVEFLNDKKDVIFET
PIYTDGELEGIAVEVAMQYTTSYQETVMSFANNIHTHEGGTHEQGFRAAL
TRVINDYAKKNKILKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTK
LGNSEVVKITNRLFSEAFQRFLLENPQVARKIVEKGILASKARIAAKRAR
EVTRKKSGLEISNLPGKLADCSSNDANQNELFIVEGDSAGGSAKSGRNRE
FQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGFGADFDVSKARY
QKLVIMTIADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIAQPPIYGVKVG
SEIKEYIQPGIDQEDQLKTALEKYSIGRSKPTVQRYKGLGEMDDHQLWET
TMDPENRLMARVTVDDAAEADKVFDMLMGDRVEPRRNFIEENAVYSTLDI
>M28_Spy1867 holB, replicative DNA helicase
MEVMRLPEVAELRVQPQDLLAEQSVLGSIFISPDKLIAVREFISPDDFYK
YAHKIIFRAMITLSDRNDAIDATTIRTILDDQDDLQSIGGLSYIVELVNS
VPTSANAEYYAKIVAEKAMLRDIIARLTESVNLAYDEILKPEEVIAGVER
ALIELNEHSNRSGFRKISDVLKVNYEALEARSKQTSNVTGLPTGFRDLDK
ITTGLHPDQLVILAARPAVGKTAFVLNIAQNVGTKQKKTVAIFSLEMGAE
SLVDRMLAAEGMVDSHSLRTGQLTDQDWNNVTIAQGALAEAPIYIDDTPG
IKITEIRARSRKLSQEVDGGLGLIVIDYLQLITGTKPENRQQEVSDISRQ
LKILAKELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAF
LYRDDYYRKEGDDAEEAVEDNTIEVILEKNRAGARGTVKLMFQKEYNKFS
SIAQFEER
>M28_Spy0551 lig, NAD-dependent DNA ligase
MKKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYV
LQDSPTQQVGGTILKGFEKYRHQYPLFSLQDAFSREELDAFDKRVKAEFP
NATYLAELKIDGLSISLSYENGFLQVGATRGDGNIGENITENIKKIKDIP
HQLSEPLTITVRGEAYMSRQSFKAINEARQENGETEFANPRNAAAGTLRQ
LDTAVVAKRQLATFLYQEASPTARNQQNEVLAELADLGFSVNPYYQLTSS
MDEIWNFIKTIEAKRDQLAYDIDGVVIKVNSLAMQEELGFTVKAPRWAIA
YKFPAEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVD
YIAEKDIRIGDTVIVYKAGDIIPAVLNVVMSKRNQQEVMLIPKLCPSCGS
ELVHFEDEVALRCINPLCPSLIQRSLEHFASRDAMNITGLGPAIVEKLFL
AGFVHDVADIYQLTKEDFMQLDGIKEKSADKLLAAIEASKSNSAEKLLFG
LGIRHIGSKVSRLILEVYGDISALLTAKEEEIARIDGLGSTIAQSLTQYF
EQKTAAILVDELKTAGVNMHYSGQKVNSDAALFGLTVVLTGKLNQLNRNE
AKDKLEALGAKVTGSVSKKTDLVIAGSDAGSKLEKAKSLGIRIEDEDWLR
QL
>M28_Spy1788 mutL, DNA mismatch repair protein
MLYQRLESVKNKIMTNIIELPEVLANQIAAGEVVERPASVVKELVENAID
AKSSQITVEIEESGLKMIQVTDNGEGMSHEDLPLSLRRHATSKIKSQSDL
FRIRTLGFRGEALPSVASISKITIKTATKEVTHGSLLIATGGEIETLEAI
STPTGTKIKVENLFYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAF
TLISDGRQLTQTSGTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYV
SLPELTRANRNYMTILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVID
IQIDPYLADVNVHPTKQEVRISKERELMALISTAISESLKEQDLIPDALE
NLAKSSTRHFSKPEQTQLPLQFRGLYYDPQKNDFFAKESAVSEKIPETDF
YFGAVDNSVKVEKAELLPHSEEVIGPSSVKHASRPQNTFIETDHPNLDLK
NRQKLSQMLTRLENEEQSVFPELDYFGQMHGTYLFAQGKDGLFIIDQHAA
QERVKYEYYRDKIGEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVG
IFLEVYGHNTFILREHPIWMKEEEIASGVYEMCDMLLLTNEVSIKTYRAE
LAIMMSCKRSIKANHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSK
ADMEKMFRRIQENHTSLRELGKY
>M28_Spy1814 mutS, DNA mismatch repair protein
MAKTNISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIG
LTSRNKNAENPIPMAGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQAVG
VVKREVVQVITPGTVVDSAKPDSANNFLVAVDFDGCRYGLAYMDVSTGEF
CVTDLADFTSVRSEIQNLKAKEVLLGFDLSEEEQTILVKQMNLLLSYEET
VYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSHLQALVHYEIKDYL
QMSYATKSSLDLVENARTNKKHGSLYWLLDETKTAMGMRLLRSWIDRPLV
SKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKANPK
DLLQLGHTLAQVPYIKAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDP
DAPATISEGSIIRTGFDERLDHYRKVMREGTGWIADIEAKERQASGINNL
KIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGQM
LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAE
TNHYIRPQFNDNHVITIQEGRHAVVEKVMGVQEYIPNSISFDQQTSIQLI
TGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADD
LISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAII
EYIHDRVGAKTIFATHYHELTDLSTKLTSLVNVHVATLEKDGDVTFLHKI
AEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRLETQSRSTEIISVPSQV
ESSSAVRQGQLSLFGDEEKAHEIRQALEAIDVMNMTPLQAMTTLYELKKL
L
>M28_Spy1549 mutS2, DNA mismatch repair protein
MSFTFRFFIYEKLFRNKENAWELSDFLATFSIILGIMKSMNNKILEQLEF
NKVKELLLPYLKTEQSQEELLELEPMTEAPKIEKSFNEISDMEQIFVEHH
SFGIVSLSSISESLKRLELSADLNIQELLAIKKVLQSSSDMIHFYSDLDN
VSFQSLDRLFENLEQFPNLQGSFQAINDGGFLEHFASPELERIRRQLTNS
ERRVRQILQDMLKEKAELLSENLIASRSGRSVLPVKNTYRNRISGVVHDI
SSSGSTVYIEPRAVVTLNEEITQLRADERHEEGRILHAFSDLLRPHVATI
RNNAWILGHLDFVRAKYLFMSDNKATIPKISDDSTLALINVRHPLLSNPV
ANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSK
IAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELG
AGTDPQEGASLAMAILEHLRLSHIKTMATTHYPELKAYGIETNFVENASM
EFDAETLSPTYRFMQGVPGRSNAFEIASRLGLAPFIVKQAKQMTDSDSDV
NRIIEQLEAQTLETRRRLDHIKEVEQENLKFNRAVKKLYNEFSHERDKEL
EKIYQEAQEIVDMALNESDTILKKLNDKSQLKPHEIIDAKAQIKKLAPQV
DLSKNKVLNKAKKIKAARAPRIGDDIIVTSYGQRGTLTSQLKDGRWEAQV
GIIKMTLTQDEFSLVRVQEEQKVKNKQINVVKKADSSGPRARLDLRGKRY
EEAMQELDHFIDQALLNNMGQVDIIHGIGTGVIREGVTKYLRRHKHVKHF
AYASQNAGGSGATIVTLG
>M28_Spy1180 mutT, mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)
MMIPTFGHKNAHKDYVTRYGVYAIIPNHEQTKIILVQAPNGSWFLPGGEI
EAGEGQLQALERELIEELGFSATIGSYYGQADEYFYSRHRDTHFYHPAYL
YEVTAFQAVSKPLEDFNNLSWFSPIEAIAKLKRESHQWGVKEWQKKHHST
N
>M28_Spy1544 mutY, A/G-specific adenine DNA glycosylase
MIELKDYGINMWDNETIASFRRTLLGWYDQEKRDLPWRRTTNPYYIWVSE
IMLQQTQVNTVIPYYKRFLEWFPQIKDLADAPEEQLLKAWEGLGYYSRVR
NMQKAAQQVMVDFGGIFPHTYDDIASLKGIGPYTAGAIASISFNLPEPAV
DGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDRPGDFNQALMDL
GTDIESAKTPRPDESPIRFFNAAYLNGTYGKYPIKNPKKKPKPMRIQAFV
IRNQNGQYLLEKNTKGRLLGGFWSFPIIETSPLSQQLDLFDDNQSNPIIW
QTQNETFEREYQLKPQWTDNHFPNIKHTFSHQKWTIELIEGVVKATDLPN
APHLKWVAIEDFALYPFATPQKKMLETYLKQKNA
>M28_Spy0710 nth, endonuclease III
MRIGKARLAKVLTIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVN
KVTPGLWQSYPEIEDLAFAELSDVENALRTIGLYKNKAKNIIKTAQAIRD
DFKGQVPKTHKELESLPGVGRKTANVVLAEVYGVPAIAVDTHVARVSKRL
NISSPDADVKQIEADLMAKIPKKDWIITHHRLIFFGRYHCLAKKPKCEIC
PVQSYCKYYQNTYGKSKA
>M28_Spy0692 parC, topoisomerase IV subunit A
MNMSNIQNMSLEDIMGERFGRYSKYIIQERALPDIRDGLKPVQRRILYSM
NKDGNTFEKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREIL
VEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKNTVSFAWNFDDT
EKEPTVLPAAFPNLLVNGSSGISAGYATDIPPHNLSEVIDAVVYMIDHPK
ASLEKLMEFLPGPDFPTGGIIQGADEIKKAYETGKGRVVVRSRTEIEELK
GGKQQIIVTEIPYEVNKAVLVKKIDDVRVNNKVPGIVEVRDESDRTGLRI
AIELKKDADSQTILNYLLKYTDLQVNYNFNMVAIDHFTPRQVGLQKILSS
YISHRKDIIIERSKFDKAKAEKRLHIVEGLIRVLSILDEIIALIRSSDNK
TDAKENLKVSYDFSEEQAEAIVTLQLYRLTNTDIVTLQNEENDLRDLITT
LSAIIGDEATMYNVMKRELREVKKKFANPRLSELQAESQIIEIDTASLIA
EEETFVSVTRGGYLKRTSPRSFNASSLEEVGKRDDDELIFVKQAKTTEHL
LLFTTLGNVIYRPIHELTDLRWKDIGEHLSQTISNFATEEEILYADIVTS
FDQGLYVAVTQNGFIKRFDRKELSPWRTYKSKSTKYVKLKDDKDRVVTLS
PVIMEDLLLVTKNGYALRFSSQEVPIQGLKSAGVKGINLKNDDSLASAFA
VTSNSFFVLTQRGSLKRMAVDDIPQTSRANRGLLVLRELKTKPHRVFLAG
GVQSDTSAEQFDLFTDIPEEETNQQMLEVISKTGQTYEIALETLSLSERT
SNGSFISDTISDQEVLVARTR
>M28_Spy0691 parE, topoisomerase IV subunit B
MLTKKEITINNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLIWEIV
DNAVDEALSGFGDDIKVVINKDGSVSVADSGRGMPTGQHAMGIPTVQVIF
TILHAGGKFGQGGYKTSGGLHGVGSSVVNALSAWLEVEITRDGSVYRQRF
ENGGKPVTTLKKVGTAPKSKSGTVVTFMPDDKIFSTIDFKFNTISERLKE
SAFLLKNVKMSLTDLRGDDPIIEEFHYENGVQDFVEYLNEDKETLTPVIY
MEGQDQDFQVEVALQYNDGFSDNILSFVNNVRTKDGGSHETGLKSAITKA
MNDYARKTNLLKEKDKNLEGSDYREGLSAVLSILVPEQHLQFEGQTKDKL
GSPLARPIVESIVSEKLTFFLLENGEVASHLVRKAIKARDAREAARKARD
DSRNGKKNKKDKGLLSGKLTPAQSKNAKKNELYLVEGDSAGGSAKQGRDR
KFQAILPLRGKVLNTEKAKMADILKNEEINTMVYTIGAGVGADFNLEDIN
YDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSK
GKGKTEKVSYAWTDGELEDLRKEFGKGAILQRYKGLGEMNANQLWETTMD
PETRTLIRVTIDDLARAERRVSVLMGDKAAPRRQWIEDNVKFTLEENTVF
>M28_Spy0949 pcrA, DNA helicase II
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFV
NPWNILAITFTNKAAREMKERALSLNPATKDTLIATFHSMCVRILRREAD
HIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDL
LDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDA
NPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQS
IYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRN
RRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFA
VLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANP
ADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKG
KAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLES
QARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDS
QAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERR
LAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLA
RPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTI
PSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMEL
KIKFPEVGLKKLLASVAPIEKK
>M28_Spy1175 phr, deoxyribodipyrimidine photolyase
MHRRKGSVMVSVMWFRRDLRIDDQKALAHAIASQSPTLCVFQFNKEQLNL
LHSRNQSSFITSVLAFRKLLKCESIDLYLMYGDLMTCFEQLLTQLKDWTD
VYFNYDESGYGRLRDQKAAQFFKKNGIAVHTYQDHYLHGSQEIINQSGQP
YKVFTPYYRIWQNYPKETPIKVELSQGRWLNLETPDDVLRTVESFKDEKY
QDVATFDEASKQLNRFIQDQLAAYHANRDFPAQLGTSRLSPFLRIGAIGI
RTVYHAVRQAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQ
IEWVNNPDWFQLWKEGKTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTK
DLLCDWRLGEQYFQQQLIDYDAASNIGGWQWAASTGTDAVPYFRIFNPVT
QGKRFDPKGEFIKAYLPQLEHVPEKYLHEPWKMPKYLQESVSCIIGTDYP
QPIVDHAKQREQAIAKYEWAKEKAKIE
>M28_Spy0157 polA, DNA polymerase I
MENKNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDH
MMKRVQPTHVLVAFDAGKTTFRTEMYADYKAGRAKTPEEFREQFPYIREM
LTALGIAYYELEHYEADDIIGTLDKMAERTEVPFDVTIVSGDKDLIQLTD
ENTVVEISKKGVAEFEEFTPAYLMEKMGLTPNQFIDLKALMGDKSDNIPG
VTKIGEKTGLKLLHEFGSLEGIYEHIDGFKASKMKENLINDRDQAFLSKT
LATINTASPITIGLDDIVYNGPDVASLSQFYDEMDFVQLKKGLASQMPQE
PVAAISYQEVTNVSADLFSAEDIFYFETLRDNYHCEAIIGFAWGHGEQIY
ASTDLSLLATDSFKQVFQKPIATYDFKRSKVLLSHLGIELVAPSYDARLA
NYLLSTVEDNELSTIARIFTDISLEEDDTVYGKGAKRAVPDKDVLLEHLA
RKVKVLLDSKSQMLDKLTAHEQLDLYQNIELPLANVLAKMEIEGIKVNRA
TLQDMAEQNKVIIEALTQEIYDMAGQEFNINSPKQLGSILFEKMQLPLEM
TKKTKTGYSTAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYIL
ADGKIHTRYVQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHEDA
VLLSSDYSQIELRVLAHISGDEHLIAAFNEGADIHTSTAMRVFGIDKAAD
VTANDRRNAKAVNFGIVYGISDFGLSNNLGITRKQAKSYIDTYFERYPGI
KAYMENVVREAKDKGYVETLFKRRRELPDINSRNFNVRSFAERTAINSPI
QGSAADILKIAMINLDKALQAGGFRAKMLLQVHDEIVLEVPNDELTAIKK
LVKDTMEAAVDLAVPLCVDESTGQSWYEAK
>M28_Spy1660 polC, DNA polymerase III alpha subunit
MSDLFAKLMDQIEMPLDMRRSSAFSSADIIEVKVHSVSRLWEFHFAFAAV
LPIATYRELHDRLIRTFEAADIKVTFDIQAAQVDYSDDLLQAYYQEAFEH
APCNSASFKSSFSKLKVTYEDDKLIIAAPGFVNNDHFRNSHLPNLVKQFE
AFGFGTLTIDMVSDQEMTEHLTKDFVSSRQALVKKAVQDNLEAQKSLEAM
MPPVEEATPAPKFDYKERAAKRQAGFEKATITPMIEIETEENRIVFEGMV
FDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAWL
RVQGNIETNPFTKSLTMNVQQVKEIVHHDRKDLMPEGQKRVELHAHTNMS
TMDALPTVESLIDTAAKWGHKAVAITDHANVQSFPHGYHRARKAGIKAIF
GLEANIVEDKVPISYDPVDMDLHEATYVVFDVETTGLSAMNNDLIQIAAS
KMFKGNIVEQFDEFIDPGHPLSAFTTELTGITDKHLQDAKPLVTVLKAFQ
DFCKDSILVAHNASFDVGFMNANYERHDLPKITQPVIDTLEFARNLYPEY
KRHGLGPLTKRFQVSLDHHHMANYDAEATGRLLFIFLRDAREKHGIKNLL
QLNTDLVAEDSYKKARIKHATIYVQNQVGLKNMFKLVSLSNIKYFEGVPR
IPRTVLDAHREGLLLGTACSDGEVFDAVLTKGIDAAVDLAKYYDFIEIMP
PAIYQPLVVRELIKDQAGIEQVIRDLIEVGKRANKPVLATGNVHYLEPEE
EIYREIIVRSLGQGAMINRTIGRGEGAQPAPLPKAHFRTTNEMLDEFAFL
GKDLAYQVVVENTQDFADRIEEVEVVKGDLYTPYIDKAEETVAELTYQKA
FEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVG
SRGSVGSSFVATMIGITEVNPMPPHYVCPSCQHSEFITDGSVGSGYDLPN
KPCPKCGTPYQKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVR
DIFGDEYAFRAGTVGTVAEKTAYGFVKGYERDYGKFYRDAEVDRLAAGAA
GVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPADDVTASWQTTHFNFHDID
ENVLKLDILGHDDPTMIRKLQDLSGIDPITIPADDPGVMALFSGTEILGV
TPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVW
LGNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGL
WLKISEEERNGYIDAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALR
VAYFKVHHPIMYYCAYFSIRAKAFELKTMSGGLDAVKARMEDITIKRKNN
EATNVENDLFTTLEIVNEMLERGFKFGKLDLYKSDAIEFQIKGDTLIPPF
IALEGLGENVAKQIVKARQEGEFLSKMELRKRGGASSTLVEKMDEMGILG
NMPEDNQLSLFDDFF
>M28_Spy1380 priA, primosomal protein N'
MSMTEKEKQMEKVAHVIVDIPLMQTDKPFSYGIPKELVSLVQLGSRVHVP
FGKGNRLLQGFVIGFGQEDSSSLKLIQTVLDPEPVLNQEQLTLADQLRKT
VFSYKITLLKAMIPNLLNSNYDKVLRPESGLKKPDRDFLFEGKPSVLYST
LDREKEKIALKGIQAGHITVSYLAKDKKNLKTEKYYHVDLDALAVHPISS
RAKKRQLLKDYLLTHTKEAKLATLYQAFSRDVVAYFVTNHLIRIDERQID
RSEPYFDQIKPSSFLTLNEQQASAVTEIVEQIGKPSKPFLIEGITGSGKT
EVYLHIIEAVLKQDKTAIVLVPEISLTPQMTSRFISRFGKQVAIMHSGLS
DGEKFDEWRKIKTGQAKVVVGARSAIFSPLERIGAIIIDEEHESTYKQES
NPRYHAREVALLRAKHHQAVVVMGSATPSIESRARASKGVYHFIQLTKRA
NPLAKIPEVTIVDFRDYIGQQAVSNFTPYLIDKIKERLVKKEQVVLMLNR
RGYSSFVMCRDCGYVDKCPNCDISLTLHMDTKTMNCHYCGFQKPIPITCP
ECHSNSIRYYGTGTQKAFDELQGVIPEARILRMDVDTTRKKRSHKTILDS
FGRQEADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRASEKTFQL
LTQVAGRAGRAHKPGEVLIQTYNPDHYAIQLAKQQDFEAFYRYEMAIRRQ
MAYPPYYFTVGITLSHRLEASVVKKAYQVTELLKSHLSDNIKILGPTPKP
IARTHNLYHYQILLKYRFEDNLEETLNRILDWSQEADNRHLKLIIDCEPQ
QFL
>M28_Spy0816 radC, DNA repair protein
MYSIKCDDNKAMPRERLMRLGAESLSNQELLAILLRTGNKEKHVLELSSY
LLSHLDSLADFKKMSLQELQHLAGIGKVKAIEIKAMIELVSRILATDKTL
TDSVLTSVQVAEKMMAALGDKKQEHLVVLYLDNQNRIFEEKTIFIGTVRR
SLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDYCFTEKIKRSCED
LGIICLDHIIVSYKDYYSFREKSTLF
>M28_Spy1783 recA, RecA
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKV
QVMSSGSLALDIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEG
GIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGA
VDLVVVDSVAALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKT
IAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRGTTQIKGTGDQ
KDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDI
IQKAGAWFSYNGEKIGQGSENAKRYLADHPELFDEIDRKVRVKFGLLEES
EEESAMVVASEEIDDLALDLDNGIEIED
>M28_Spy1554 recD, exodeoxyribonuclease V alpha chain
MEYVFTGTVDRIIFENQANFFKILLLAIEDTDSDIDDFEIIITGTMADII
EGDDYTFWGELTQHPKYGQQLKLSRYQKIKPSSSGLVNYFSSDHFKGIGK
KTAEKIIALYGHNTIDHILEDPSKLETISGLSKANRQAFVAKLKLNYGTE
QLIAGLVELGLSNRFAFQAFEKYKEEALDLVKENPYQLVEDLQGFGFKMA
DALAENLGIESGSPKRFRAALLHCLLEESINRGDTYVQARQLLDFAITLL
EDARQVECDPAAVAEQLSELIIEGKIKNSDTKLFDASLYFAEEGIANNIS
RLLDTPLSQSFSHDTIQTTIQAVQKDFAITYDQVQQEAITKALTSKVFLL
TGGPGTGKTTVIRGILQAYANLHQIDLDKKDLPILLAAPTGRAARRMNEL
TGLPSATIHRHLGLNGDNDYQAMEDYLDCDLLIVDEFSMVDTWLANQLLG
AINSTTQVIIVGDSDQLPSVGPGQVLSDLLKVNSLPQIALQKIFRQSQES
TIVNLADQMRRGILAADFRDKKADRSYFEAQAAFIPDMIQKIVLSAIKSG
IPAEEIQILAPMYKGQAGINHLNQLMQELLNPLQGQTEFLFNDTHFRKGD
KVLHLVNDAQLNVFNGDIGYITDLIPAKYTESKQDELILDFDGSEVTYPR
NEWLKLTLAYAMSIHKSQGSEFQVVILPITRQSGRLLQRNVIYTAITRSK
SKLILLGEYTAFEYAIKHEGDKRQTYLIERFQEQSDLASSQSTNSNPTEN
SQSDNDDFRLTPENYSTIDSMIGLTESDIALFFQKKS
>M28_Spy1888 recF, DNA replication and repair protein recF
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTR
SHRTRADKELIHFDHSTVSLTGKIQRISGTVDLEINLSDKGRVTKINALK
QAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSEL
SHYNHVLKQRNSYLKSAQQIDAAFLAVLDEQLAGYGARVMEHRIDFINAL
EKEANTHHQAISNGLESLSLSYQSSVVFDKKTNIYQQFLHQLEKNHQKDF
FRKNTSVGPHRDNLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALT
GDNPILLLDDVMSELDNTRQTKLLETVIKENVQTFITTTSLDHLSQLPEG
IRIFHVTKGTVQVDSDIH
>M28_Spy1509 recG, ATP-dependent DNA helicase
MILTAPMSNLKGFGPKSAEKFQKLDIYTVEDLLLYYPFRYEDFKSKSVFD
LVDGEKAVITGLVVTPANVQYYGFKRNRLSFKLRQGEAVLNVSFFNQPYL
ADKIELGQEVAVFGKWDATKSAITGMKVLAQVEDDMQPVYRVAQGISQST
LIKAIKSAFEIDAHLELKENLPATLLEKYRLMGRSQACLAMHFPKDITEY
KQALRRIKFEELFYFQMNLQVLKAENRSETNGLPILYSKHAMETKISSLP
FILTNAQKRSLDDILSDMSSGAHMNRLLQGDVGSGKTVIAGLSMYAAYTA
GFQSALMVPTEILAEQHYISLQELFPDLSIAILTSGMKAAVKRTVLAAIA
NGSVDMIVGTHALIQDSVQYHKLGLVITDEQHRFGVKQRRIFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSIIDELPAGRKPIMTRWVKHEQLGTVL
EWVKGELQKDAQVYVISPLIEESEALDLKNAVALHAELSTYFEGIAKVAL
VHGRMKNDEKDAIMQDFKDKKSHILVSTTVIEVGVNVPNATIMIIMDADR
FGLSQLHQLRGRVGRGYKQSYAVLVANPKTDSGKKRMTIMTETTDGFVLA
ESDLKMRGSGEIFGTRQSGIPEFQVADIVEDYPILEEARKVSAAIVSDPN
WIYEKQWQLVAQNIRKKEVYD
>M28_Spy0707 recJ, single-stranded-DNA-specific exonuclease
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEF
LTADLSQLHDPYLLHDMAKAVPRIRQAIEEGERILIYGDYDADGMTSASI
VKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGV
AGHEAIRYAQEQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLA
GCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENRVLVKNGLAML
KHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIEL
LTGFDDQEAQAIALMIKKKNEERKALVQDIFDQAMAMVDPQKPVQVLAQA
GWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTI
DERLSLDDLSLDILKSLDKLAPYGMDHQKPVFYVKDIRVSQARTIGQDQS
HLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSL
QFMLVDARVDGVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFK
TWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYKTIYQFPEFDL
RHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREIS
ESHIYQDLKELVKFQEIMALASPKEMYDYLVKSNDQ
>M28_Spy1167 recN, DNA repair protein
MMLLEISIKNFAIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLGAR
ASTEVIRRGANKAEIEGFFSVDATPELVACLESSGIAMEEELIIRRDIFA
NGRSVSRINGQMVNLATLKQVGQFLVDIHGQHDQEELMRPQLHQQILDAF
GDKAFEQLKENYQLIFDRYKSLRRQVIDKQKNEKEHKDRIDMLAFQIAEI
EAAALSRGEDDRLNQERDRLMNHKQIADTLTNAYVMLDNDDFSSLSNIRS
SMNDLLSIEQFDSEYKGMSTSISEAYYILEEVSKQLSDTIDQLDFDGGRL
QEIEFRLDTLNSLTRKYGGNVNDVLDYYDNIIKEYQLLTGDDLSSGDLES
ELKALEKQLVAAATNLSERRHQLAEQLEAEIKAELKELYMEKADFKVHFT
TSKFNRDGNESLEFYISTNPGEGFKPLVKVASGGELSRLMLAIKAAISRK
EDKTSIVFDEVDTGVSGRVAQAIAQKIYKIGRHGQVLAISHLPQVIAIAD
YQYFISKESKEESTVSKVRLLTPEERVEEIASMIAGTDMTQAALTQAREL
LAKH
>M28_Spy0019 recO, DNA repair protein
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQ
PLTIADFIFKLNDTGLSYVVDYSNVNTYRYINNDIFRLAYASYVLALADA
AIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFH
ECAICHRTDLPLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKI
TFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFIDNLVKWGDIM
K
>M28_Spy1153 recR, recombination protein
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAA
KRELTYCSICGNLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEY
HGYYHVLHGLISPMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGE
ATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
>M28_Spy0574 rexA, ATP-dependent nuclease subunit A
MLFNINEKGEPLVISFAPFLSPEAIKHLQENERCSDQSQKRTAQQIEAIY
TSGQNILVSASAGSGKTFVMVERILDKILRGVSIDRLFISTFTVKAATEL
RERIENKLYSQIAQTTDFQMKVYLTEQLQSLGQADIGTMDAFAQKVVSRY
GYSIGISSQFRIMQDKAEQDVLKQEVFSKLFSEFMNQKEAPVFRALVKNF
SGNCKDTSAFRELVYTCYSFSQSTENPKIWLQENFLSAAKTYQRLEDIPD
HDIELLLLAMQDTANQLRDVTDMEDYGQLTKAGSRSAKYTKHLTIIEKLS
DWVRDFKCLYGKAGLDRLIRDVTGLIPSGNDVTVSKVKYPVFKTLHQKLK
QFRHLETILMYQKDCFPLLEQLQDFVLAFSEAYLAVKIQESAFEFSDITH
FAIKILEENTDIRQSYQQHYHEVMVDEYQDNNHMQERLLTLLSNGHNRFM
VGDIKQSIYRFRQADPQIFNQKFRDYQKKPEQGKVILLKENFRSQSEVLN
VSNAVFSHLMDESVGDVLYDEQHQLIAGSHAQTVPYLDRRAQLLLYNSDK
DDGNAPSDSEGISFSEVTIVAKEIIKLHNDKGVPFEDITLLVSSRTRNDI
ISHTFNQYSIPIVTDGGQQNYLKSVEVMVMLDTLRTINNPRNDYALVALL
RSPMFAFDEDDLARIALQKDNELDKDCLYDKIQRAVIGRGAHPELIHDTL
LGKLNIFLKTLKSWRRYAKLGSLYDLIWKIFNDRFYFDFVASQAKAEQAQ
ANLYALALRANQFEKSGYKGLYRFIKMIDKVLETQNDLADVEVAAPKQAV
NLMTIHKSKGLQFPYVFILNCDKRFSMTDIHKSFILNRQHGIGIKYLADI
KGLLGETTLNSVKVSMETLPYQLNKQELRLATLSEQMRLLYVAMTRAEKK
VYFIGKASKSKSQDITDPKKLGKLLPLALREQLLTFQDWLLAIADIFSTE
DLYFDVRFIEDSDLTQESVGRLQTPQLLNPDDLKDNRQSETIARALDMLE
AVSQLNANYEAAIHLPTVRTPSQLKAAYEPLLEPIGVDIIEKSSRSLSDF
TLPHFSKKVKVEASHIGSALHQLMQVLPLSKPINQQTLLDALREIDSNEE
VKTALDLKKIESFFCDTSLGQFFQTYQKHLYREAPFAILKVDPISQEEYV
LRGIIDAYFLFDDHIVLVDYKTDKYKQPIELKKRYQQQLELYAEALTQTY
KLPVTKRYLVLMGGGKPEIVEV
>M28_Spy0573 rexB, ATP-dependent nuclease subunit B
MKLIYTEMSYSMTEILVNEARKAADQGYRVFYIAPNSLSFEKEREVLTLL
PERGTFSIIVTRFVQMSRYFTVESSPSKQHLDDTTLAMIFYRALMQLKPE
DLPSYGRLQNNSVFIEQLVELYKELKNAQLSVHDLTGLDHPQKQEDLIKI
IELAETIMIQQDYNQDSPLQSFARAIKLGLLNNQLSKTVIVIDGFSRFSA
EEDYLLSLLNNNCQEVIIGSYVSQKAYQKSFIKGNIYEASLHFLQDLAQK
YHIKPVFATSNQVFKPAFSRLTQLFEATHDFSQVDWQLQKNDLDHFSLWQ
CHHQKEEIEHVAKSIRQKLYEGYRYKDILVLLGDMDAYQLQIGPIFDKFE
IPYYLGKAEPMAAHPLVQFIESLERSQRYNWRREDILNMLKSGLFGCFDD
SDIDRFEEYTQFADIKGFTKFSKPFTINSSRQYPLDFLNEMRQDIVLPLQ
ELFKSQKQLGASLVDKLILFFKKIRLAENMQGLAQSQLEVEKNEEVWKRF
TDILTSFHHIFGQEKLRLSDCLALIKTGMKSAQYRVVPATLDVVTIKSYD
LVQPHSKPFVYAIGLTQSHFPKQIHHSGLLSDQERARINEIRNYRHFDIA
SAENSKKNHQTALSLFNAATKELVLSVPTVINETFDDLSPYLKELISFGL
PLLDKGKNYLSYDNSDIGNYKALLSQIIAINRQDLIEMSDQDKMFWTVVL
RYLRKQLRKQQLELPTSDYRLSTKPLSKEVIEVCFPKGIPLKLSATALTV
FYNNQYNYFLKYVLNLNKTESIHPDSRIHGQYLHRVFERLMKDHTQEPFD
NKLKQAIYHTNQESFFQQVYQDNAEAEYSLAILEDIVRSTAPILQLNQNI
KVIDQEKNFHLDMGNEILVHGIIDRIDQLSDGSLGIVDYKSSANQFDIGT
FYNGLSPQLVTYLAALKQIAPHDINQLFGAMYLHLQDPKLDLVTFKQIDN
TLVESIYKALTYKGIFSEVEKEHLSTGAYQTKNALYSNDELETLLNYNKY
LYLKAAKHIKKGHFLINPYTSDGKTVQGDQLKAITRFEADLDMAQARRLV
TLPAKEKKECFLTLMRKESHL
>M28_Spy1786 ruvA, holliday junction DNA helicase
MYDYIKGQLTKITAKYIVVETNGLGYIINVANPYSFTDSVNQLVTIYLHQ
VIREDAHLLFGFHTEDEKDVFLKLISVSGIGPTTALAIVAVDDNEGLVNA
IDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFVEAPQETGNTKARSNKAGN
TQLDEAIEALLALGYKAAELKKIRAFFEGTSETAEQYIKSALKLLMKG
>M28_Spy0035 ruvB, holliday junction DNA helicase
MLLTGGDYNKSRPLLSFTLCYNSPMARILDNDVMGNEEFSDRTLRPQYLH
EYIGQDKVKEQFAIFIEAAKRRDESLDHVLLFGPPGLGKTTMAFVIANEL
GVNLKQTSGPAVEKAGDLVAILNELEPGDILFIDEIHRMPMSVEEVLYSA
MEDFYIDIMIGAGDTSRSIHLDLPPFTLIGATTRAGMLSNPLRARFGITG
HMEYYQEKDLTEIVERTATIFEIKIDHEAARKLACRSRGTPRIANRLLKR
VRDYAQIIGDGIITAQITDRALTMLDVDREGLDYIDQKILRTMIEMYQGG
PVGLGTLSVNIAEERNTVEEMYEPYLIQKGFLMRTRTGRVATQKAYRHLG
YPYQNT
>M28_Spy1715 sfbX, fibronectin-binding protein
MTKKFIKSAVILGLASITISMTQPVEAISNSLEYQAQYERVKEELDALKE
KGPKLGERSLYFRLVNKFLSWFGQVWDPLAIKETDYLLDLIGQVNYLVSN
TEFQAPEYKDAKNKLDLAVAGYDLYLAREKKRGDAPDYQVTQLTLEQLKT
IKKKIREALETFAQEVKTIQQKNPDLFPHAYVLNAKSKDITDKAQPFLVN
SYYDVFYKQFLFTNTNDGYNYNKEADNLTSYQNLIKELLGLKAEIDQLTK
GKTGDDRLEMLMWQSKFTLSDSRKKSHLSAYYTQGEYVDKVVLSEEAPNL
RTAKEKVKTLKGILHDYYVETNKPEKAKKYHVEDETLPSQPEAPATPEAP
APAPVPAPVPVPGQKPAEDERSPQATEPANPSKEDSSTDASQGSHDSENP
ATDSPSQPQAPDQGNHQSQVPNAKPQTDKTDTPNAPAIPQDTPKAPEAGG
QSGPAGNTEEKAPDSGPKESDQSSSKESPSVGEDTTPNQPDVLVGGQSEP
IDITEDTITDAPPTVSGHNASTQPQSVVEDTAPQRPDVLVGGQSEPIDIT
QDTQPGMSGSNDATVINEDTKPKRVFHFDNKEPQASEKAAEQKLAPHDSH
TTPQASDDTAAPHLPASGDKPEKVFALAALTMVAAAGLLSKKRRNTDKN
>M28_Spy0858 smf, hypothetical protein
MNHFELYKLKKAGLTNKNILNILDYQEHQEKSLSLRDMAVVSGCKHPSHF
IEAYKQLDIQKLKIEFKQFPSISILDKHYPMALKEIYNPPVLLFFQGNLD
LLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHL
ACLKNGGQTIAIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPGEEALS
YHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGRDIFAVPGNIL
DGKSEGCLQLIKEGATCVTSGMDILSEY
>M28_Spy0280 snf, phage-related DNA helicase
MMARLIPGRVRNEGIKLYEQGLVSFQDDNKGILQIEVETYQVQYGADDED
ITCQCDTFHMKHYCKHIAAVEYFLKNDQKGKLFLKQLTNQTKIKETTKKM
TSFGSLFLDSLAMNEDDSVKYRLSALGSRSPFSSDYWWSLKINRLPDDRS
YVIRDIKGFLQLIKKEGFYQIGKNYFEQLSWLQFDPSSQDLIEFLWRLAS
NTDKGDNENIFPNHARHLRLPSGFFEEGIHYLTSLYDFTFEGPSQTYHHL
FVRSLEAEAGLYEFKVEVHRKSIELQIAEKNVQYLFDNDYLLYQDTFYHL
TLKQRKMVQAIRSLPIEADLAKHIHFDLDDHAKLAASLSDFKQIGLVEAP
KSFAIRDFEVTFQFDLLNRDEISCQLMFDYGNYQVSDKASLEALPFASHL
KKEEKINRSLLAFGFSPQFYSKKRLTSAKELYTFFEETVPCFERLGNVAL
STAIQALQVKEMPKIAIRRNQGLLDISFDFSTIIENDIDQAVTALFQNNP
YFVSQTGQLVVFDDETQKVSKSLQELRARQLKNGHLQLDGIRALQVSKLF
EGMTSVHFSKELEELAYHLQHPETFSIKPLPVKAQMRDYQRNGVQWLSML
NHYGFGGILADDMGLGKTLQTLAFLASHLKSDSKVLILSPSSLIYNWFDE
CQKFTPQLDVVVSYGLKQIRDQIIEEGHQITITSYSSFRQDFETYQAFHY
DYLILDEAQVIKNAQTKISHCLRAFNTANCFALSGTPIENKMLEIWSIFQ
IVLPGLLPTKKEFLKLTAEQVSRYIKPFVMRRKKEDVLPELPDLIETNYS
NEMTDEQKAIYLAQLRQMKDQIRNSSDVDISRQKIEILSGITRLRQICDT
PSLFMDYQGKSGKLDSLRILLTQIKENGHRALIFSQFRGMLDLAKQEMTA
LGLTSYQMTGSTPANERQEMTRAFNNGSKDAFLISLKAGGVGINLTGADT
VILIDLWWNPAVEMQAISRAYRIGQKENVEVYRLITRGTIEEKILELQES
KRNLVTTVLDGNENRASMSIEEIKEILGLNTH
>M28_Spy0100 ssb, single-strand DNA binding protein
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFIS
IVVWGKLAETLVSYASKGSLMSIDGELRTRKYDKDGQVHYVTEVLCQSFQ
LLESRAQRAMRENNVTNDLVDLVLEEDTLPF
>M28_Spy1268 ssb2.1, phage single-strand DNA binding protein
MINNVVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFIN
CVIWRQSAENLANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADNF
QMLESRNQQSGQGNSSQNDNSQPFGNSNPMDISDDDLPF
>M28_Spy1541 ssb2.2, phage single-strand DNA binding protein
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFIN
CVIWRQPAENLANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADNF
QMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGN
SNPMDISDDDLPF
>M28_Spy1785 tag, DNA-3-methyladenine glycosylase
MFHMKRCSWVPKDNQLYCDYHDLEWGQPLHDDRDFFELLCLESYQSGLSW
LTVLKKRQAFRTVFHHYDIASVAAFTSEEMADALENPSIIRHKLKLAATV
NNAIAVQKIQEEFGSFSTYLWNFVGGKPINNLVNQENLVPAQTELSIRLA
KDLKKRGFKFLGPTTVYSFMQASGLVNDHEEACVFNRIF
>M28_Spy0214 tatD, sec-independent protein translocase protein
MSASKGFYDQPKRQKFSPSFLMWLRSLCYNNIMTNKVEKLTIFDTHTHLN
VAEFQGHETEELTLAQEMGVAYHNVVGFDQATISGALALADQYPNVYATI
GWHPTEAGSYSEAVEESIVSQLSHPKVIALGEIGLDYYWMEDPKEVQIEV
FKRQMQLAKDHDLPFVVHTRDALEDTYEVIKAAGVGPRGGIMHSYSGSLE
MAERFIELGMMISFSGVVTFKKALDIQEAAQHLPLDKILVETDAPYLTPV
PKRGKQNHTAYTRYVVDKIAELRGMTVEEVAKETTANAKRVLKLD
>M28_Spy0006 trcF, transcription-repair coupling factor
MNILELFSQNKKVQSWHSGLTTLGRQLVMGLSGSSKALAIASAYLDDQKK
IVVVTSTQNEVEKLASDLSSLLDEELVFQFFADDVAAAEFIFASMDKALS
RIETLQFLGNPKSQGVLIVSLSGLRTLLPNPDVFTKSQIQLTVGEDYDSD
TLTKQLMTIGYQKVSQVISPGEFSRRGDILDIYEITQELPYRLEFFGDDI
DSIRQFHPETQKSFEQLEGVFINPASDLIFEASDFQRGIEQLEKALQTAQ
DDKKSYLEDVLAVSKNGFKHKDIRKFQSLFYEKEWSLLDYIPKGTPIFFD
DFQKLVDKNARFDLEIANLLTEDLQQGKALSNLNYFADNYRELRHYKPAT
FFSNFHKGLGNIKFDQMHQLTQYAMQEFFNQFPLLIDEIKRYQKNQTTVI
VQVESQYAYKRLEKSFQDYQFRLPLVSANQIVSRESQIVIGAISSGFYFA
DEKLALITEREIYHKKIKRRARRSNISNAERLKDYNELAVGDYVVHNVHG
IGRFLGIETIQIQGIHRDYVTIQYQNSDRISLPIDQIGSLSKYVSADGKE
PKINKLNDGRFQKTKQKVARQVEDIADDLLKLYAERSQQKGFSFSPDDDL
QRAFDDDFAFVETEDQLRSIKEIKADMESMQPMDRLLVGDVGFGKTEVAM
RAAFKAVNDHKQVAVLVPTTVLAQQHYENFKARFENYPVEVDVLSRFRSK
KEQAETLERVRKGQIDIIIGTHRLLSKDVVFSDLGLIVIDEEQRFGVKHK
ETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTY
VLENNPGLVREAIIREMDRGGQIFYVYNKVDTIEKKVSELQELVPEASIG
FVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFIENAD
HMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKVLTEVSEKRLEAIKGFTEL
GSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEQAIASKQGK
TTVRQKGNTEINLQIDAYLPDDYISDERQKIDIYKRIREIQSREDYLNLQ
DELIDRFGEYPDQVAYLLEIALLKHYMDNAFAELVERKNNQVIVRFEVTS
LTYFLTQDYFEALSKTHLKAKISEHQGKIDIVFDVRHQKDYRILEELMLF
GERLSEIKIRKNNSVFK
>M28_Spy0688 ung, uracil-DNA glycosylase
MAHSIWHEKIKSFLPEHYYGRINHFLDEAYASGLVYPPRENVFKALQVTP
LEETKVLILGQDPYHGPKQAQGLSFSVPEEISAPPSLINILKELADDIGP
RDHHDLSTWASQGVLLLNACLTVPAGQANGHAGLIWEPFTDAVIKVLNEK
DSPVVFILWGAYARKKKAFITNPKHHIIESPHPSPLSSYRGFFGSKPFSR
TNAILEKEGMTGIDWLQ
>M28_Spy1537 uvrA, excinuclease ABC subunit A
MRRVPLGTFKMQNKIIIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSS
LAFDTIYAEGQRRYVESLSAYARQFLGNMEKPDVDSIDGLSPAISIDQKT
TSKNPRSTVGTVTEINDYLRLLYARVGTPYCINGHGAITASSAEQIVEQV
LALPERTRMQILAPIVRRKKGQHKTIFEKIQKDGYVRVRVDGDIFDVTEV
PELSKSKMHNIEVVIDRLVNKDGIRSRLFDSVEAALRLGDGYLMIDTMDG
NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDLD
LVVPDPSKSLREGALAPWNPISSNYYPTMLEQAMASFGVDMDTPFEALTE
EERDLVLYGSGDREFHFHYVNDFGGERNIDIPFEGVVTNVNRRYHETNSD
YTRNVMRGYMNELTCATCHGYRLNDQALCVHVGGEEGPHIGQISELSIAD
HLQLLEELELTENESTIAKPIVKEIHDRLTFLNNVGLNYLTLSRAAGTLS
GGESQRIRLATQIGSNLSGVIYILDEPSIGLHQRDNDRLIESLKKMRDLG
NTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEIIASGTPKQVAKNKKSIT
GQYLSGKKFIPVPLERRSGNGRFIEIKGAAQNNLQSLDVRFPLGKFIAVT
GVSGSGKSTLVNSILKKAVAQKLNRNADKPGKYHSISGIEHIERLIDIDQ
SPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRC
EACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHYKEKNIAEVLD
MTVDDALVFFSAIPKIARKIQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLERFVDDGNTVLVIEH
NLDVIKSADHIIDLGPEGGVGGGQIVATGTPEEVAQVKESYTGHYLKVKL
QQ
>M28_Spy1056 uvrB, excinuclease ABC subunit B
MIDKRDDKPFKLKSKYKPSGDQPQAIESLVDNIEGGEKAQILLGATGTGK
TYTMSQVISKVNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDY
YQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCI
YGLGSPKEYADSAVSLRPGQEISRDTLLNQLVDIQFERNDIDFQRGCFRV
RGDVVEVFPASRDEHAFRVEFFGDEIDRICEIESLTGKTIGEVDHLVLFP
ATHFVTNDEHMEQSIAKIQAELAEQLQLFESEGKLLEAQRLRQRTEYDIE
MLREMGYTSGVENYSRHMDGRSPGEPPYTLLDFFPEDFLIMIDESHMTMG
QIKGMYNGDQARKQMLVDYGFRLPSALDNRPLRREEFESHVHQIIYVSAT
PGEYEMSQTNTIIEQIIRPTGLLDPEIDVRPSMGQMDDLLGEINQRVARD
ERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGV
FDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNV
DGHVIMYADKMTDSMQRAIDETARRREIQIAYNKAHGIVPQTIKKDIRGL
ISISKTSHNDISKEEMDYESMSRGERKEAINALQKQMQEAAELLDFELAA
QMRDLILELKLMD
>M28_Spy0765 uvrC, excinuclease ABC subunit C
MNELIKHKLELLPDSPGCYLHKDKEGTIIYVGKAKNLKKRVRSYFRGSHD
TKTELLVSEIVDFEYIVTESDTEALLLEINLIQKNMPKYNIKLKDDKSYP
FLKITNESFPRLVITRYIKKNDGLYFGPYPDSYTANEVKKLLDRIFPFKK
CKNPINKVCFYYHLGQCCAHTICHTDKAYWDRLIDDVKHFLNGKDDKIIE
DLRSKMLAASEEMAFERAAEYRDLISGIATMRTKQRVMSKDLQDRDIFGY
YVDKGWMCVQVFFVRQGKLIQRDVNLFPYYNDAEEDFLTYMGQFYQDKQH
FIPKEVFIPEAIDEELVAAIVPTKIIKPKRGEKKQLVALATKNARVSLQQ
KFDLLEKDIKKTSGAIENLGQLLKIDKPVRIEAFDNSNIQGTSPVAAMVV
FVDGKPSKKDYRKFKIKTVVGPDDYASMREVLFRRYSRVKKEGLQAPNLI
IVDGGVGQVNVAKDVIEKQLGLTIPVAGLQKNDKHQTHDLLFGNPLEVVP
LPRRSEEFFLLHRIQDEVHRFAVTFHRQVRRKNSFSSTLDHISGLGPKRK
QLLLRHFKTITAIASATSEEIQALGIPKTVVEAIQQQITDNKNDRSSP
>M28_Spy0885 xerD, recombinase
MKKLLLLRNYDDMRRELLLEKIETYKAVMPWYVLDYYQSKLAVPYSFTTL
YEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLEAFVLYLRE
RPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVM
KKVSTKKKKETLASRAENIKQKLFLGDETLAFLDYVDKEYEQKLSNRAKS
SFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKR
DSVNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSI
EKMVGKYSEDFKIRVTPHKLRHTLATRLYDATKSQVLVSHQLGHSSTQVT
DLYTHIVNDEQKNALDNL
>M28_Spy1171 xseB, exodeoxyribonuclease VII small subunit
MSKTKTFEENLQDLETIVNKLENGDVPLEEAISEFQKGMLLSKELQKTLQ
AAEKTLVKVMQADGTEVDMDD