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# Streptococcus thermophilus LMG 18311, LMG 18311

>stu1988 conserved hypothetical protein, MutT/nudix family
MRSEHISQPGEISFPGGRVEDGETFQEAAIRETCEELNLVPNQIDIWGEI
GYLIHQGRTIHCFVGKIKIENWEYIHPNEEVYRLFTVEVDTLLTKEPIYY
TVTSTLSEVKDFPFFLVKNREKYNFGYSERHIPFYRNLTENIWGMTAIFT
HKFTNILKDLESKLKINDNIVIFLILVKLLIWY
>stu0129 IS1193, transposase, ISL3 family, truncated
MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPSPSCPHCQGKM
IKYDFQKNSKIPLLEQAGTPTLLRLKKRRFQCKSCRRVTVAETSIVEKNC
QISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTGYRKLDQFTFKEHYDKL
PAVMSMWLHQRWLY
>stu1800 topoisomerase/primase
MSKIKIQEVIVVEGKDDTANLRRFYEVDTYETRGSAINEDDLERIDKLNE
LRGVIVFTDPDYNGERIRKIIMEAVPTAKHAFLNRGEASPKSKTRGRSLG
VEHANFEDIQKALARVLGSYDDDNQFDISKSDLMKLGLLMGSDSRKRREY
LGEALRIGYCNGKQLLKRLELFGITLEELEEVMAKY
>stu1552 ISSth2, transposase, IS5 family, truncated
MDFTVEADNIHDSQFFPALLAKLEPFSPEFIIADSGYKTPSVAKFLLENW
IIPVFPYTRPRGRRDFLRLKDFVYNEYSDCYLCLENQVLTYRTTTREGYR
EYKSNSKICKIYLLLAICTESRQNQKVVVRHIWKDALEVCEDIRHQSEMK
ERYQHRKETIEWLFGTSKEYHNLRYTREKGKSKMEDKVGLTLACLNIKKL
VKMMVGKTWYFI
>stu1905 ISSth4, transposase, IS30 family, truncated
MEKLLLVIKQVIEPFTKDILITTHYLMVLVVVIRKLRHRGKKRHTKDYIE
NRGKISISHTIQERPKDANNRTIIRDWEDDTVAGKTGKSCLVTLTDRYYR
FLKIQKVAVKKSKLVIEAMVKMLEPLTKHTVTPDRGKEFTYHQKLCDQLK
I
>stu0765 IS861, transposase (orf2), IS3 family, truncated
MSRKGNSPDNGMMESFFDILKSEMFYGYEKMFHSLEQLEQAIVDYIDYYN
NKRIKVKLKGLGPVQYRTKSFV
>stu0206 IS861, transposase (orf2), IS3 family, truncated
MRDEKEQEKKTEIVQGLVTEFPLDILLNIIKLTRSTYYYHLKQLNQVDKN
QSIKVEIQAIYDEHNGNYGYRRITLELRNRGFVVNQKKVQRLMKLLGLSS
QIRRKRKYSSYQGEVGKKADNLSDQG
>stu1898 ISSth4, transposase, IS30 family, truncated
MEKLLLVIKQVIEPFTKDILITTHYLMVLVVVIRKLRHRGKKRHTKDYIE
NRGKISISHTIQERPKDANNRTIIRDWEDDTVAGKTGKSCLVTLTDRYYR
FLKIQKVAVKKSKLVIEAMVKMLEPLTKHTVTPDRGKEFTYHQKLCDQLK
I
>stu0871 ISSpn1, transposase, IS3 family, truncated
MLNNWIAQYKKNGYTLLEKRRGRVPKMGRKRKYSSYQGEVGKKADNLIQR
QFEASKLMEKCYTDVTEFAIPASSQKLYLSPVLDGFNSEIVAYNLSRSPN
LVQVKAMIEQAFTEDHYENTILHSDQGWQYQHDFYHHFLEDKGIQPSMSR
KGNSPDNGMMESFFGILKSEMFYGYEKTFHSLEH
>stu0601 conserved hypothetical protein, MutT/nudix family protein
MNPTFGDKVEEAHYQTRYGVYAVIPNQDKTKIILVQAPNEAWFLPGGEIE
AGENHFSALKRELIEEIGYTATLGQYYGQADEYFYSSHRDTYYYNPAYIY
EVVDFSEIGKPLEDFNNLAWFPIDEAIAKLKRGSHKWGIEQWKESNTLIA
KS
>stu1960 DNA recombination protein, putative
MRVMGLDVGSKTVGVAISDPLGFTAQGVEIIKINEEAKEFGFDRLGELVK
EYQVDKFVVGLPKNMNNTEGPRVEASKAYGDKIKEIFNLPVDYQDERLTT
VQAERMLVEQADVSRGKRKKVIDKLAAQLILQNYLDRMF
>stu0108 IS1216, transposase, IS6 family, truncated
MTINHFKGKQFQQDVIIVTVGYHLRYNLSYREVQEILYDRGINVSHTTIY
RWVQEYGKLLYQIWKKKNKKSFYSWKMDEIYIKIKGKWHYLY
>stu0843 IS1191, transposase, IS256 family, truncated
MRNITRKRFIPMTQFTKELLNFLAQKQDSDEFFRTSLEIAMNDLLQAELS
AFLGYEPYNKLGYNSGNSRNGSYARKFETKYGTVQLSIPRDRNGNFSSAL
LPAYGRRDDHLEEMVIKPV
>stu1858 conserved hypothetical protein
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANELII
KNNEKLRALNLSKEEWRRAFQFLFIKLGQLEALQANHQFTPDAIGFIILY
LLEGLTQEKQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLS
ASIAEVVNSVAVYIQGDAVRPHILKESNVIISDLPIGYYPNDEIASRFKV
AATGEHTYAHHLLMEQSLKYLKKDGIAIFLAPTNLLTSPQSDLLKKWLSG
YADIIAVITLPEAAFGNKHNMKSIFVLKKQTKNAPETFVYPLSDLQNPRI
LKDFTENFQKWKSDNSIF
>stu0244 ISSpn1, transposase, IS3 family, truncated
MKAMLEQAFTEDHYENTILHSDQGWQCQHDFYHHFLEGKGIQPSMSRKGN
SPDSGMMESFFVILKSEMFYGYEKTFHSLEQLEQAIVDYIDYYNNKLIKV
KLKGLISVQYRTKSFV
>stu1302 IS1193, transposase, ISL3 family, truncated
MKYPLEIRQQVQFITMDMSGAYIPLARKLFPNAKTVPDRFHTIQHLGRAF
LKTRIAIMNQFNKNSLPY
>stu1274 ISSth5, transposase, IS110 family, truncated
MIPGVSETCAATILAEIGPDVKAFQSDADLASWAGLCPESYESADIKKSS
HITQGNRYIKQSLTMSVLIEAHSKDNAFLSFYIKISQRGSKMKAGIACAH
KLLRIFYKILATHQEYNKEKVLELRKQF
>stu1649 methyltransferase, putative
MTDLRVVAGDFGGRPLKTLEGKTTRPTTDKVKGAIFNMIGPFFDGGRVLD
LFSGSGSLAIEAISRGMSSAVLVEKDRRAQAVIQENIKMTKSEEQFQLLK
MDAARALTQLTGQFDLVLLDPPYAKEQIVANITQLEEQGLLSEEVMLVCE
TDKGVDLPEEVSNFGIWKQKTYGISKVTVYVR
>stu1783 IS657, transposase, IS200 family, truncated
MRQDNNSLGHTTWNCKYHIVFAQKYRRQIIYGKYKASIGQIFRLLCERKG
VEIHEAEACPDHIHMLVSIPSKLSISSFMGYL
>stu0841 IS1191, transposase, IS256 family, truncated
MTNLIESLNKEIKRQTKKKVLFPNEEALERYLVTLFEDYNFKQNQRIHKG
FGQCADTLESLFD
>stu0879 SOS responce UmuC protein, truncated
MDLYIKKNIQNQHIFQNYASVDDILSYSIDEGFIDLTSSLNYFIPDRTVT
RKDKLDMISGRELANSNPDTLKKELGIVGLDLFFHANGIDESNVHKPYKT
KSHGLGNSQILPRDYDRQADIELILKEIAEQVAIRLRRVHKKACQVSISI
GFSKLESKRSLQAQMKIEPANNPKILIGHVISLFRKKYQGGAVRSVSVSY
ANFVDEKIQILSLFDNPDDIDKEERLQSAIDSICQEFGFTTIQKATALQE
ASRSIAQSKLIGGHSTGGLDGLK
>stu1087 IS1167, transposase, ISL3 family, truncated
MSTFHYRSYGTFCIYSKRLHNFHGGFTHYRNYRAKCHRHSRRKNPSNHLK
PLFLRCPRKVRNRVKVITMDMFSPYYQLAKQLFPNAKIVLDRFHIVQHLS
RAMNRVRIQIMNQFDRKSQEYRALKRYWKLIQQDSRKLSDKRFYRPMFRM
HLTNKEILEKLLSYSDELRQHYELYQLLLFHFQEKNSDHFFSLIEQEIAT
VNPIFQTVLKTFLKDKDKVVNAMDLPYSNAKLEATNNLIKVIKRNAFGFR
NFENFKKRILIALNSEKGWGEPFSAYLLKTKKR
>stu0136 MutT/nudix family protein
MDAYLKDQLDFTGVKVALLVEKSILVVLRDNKTDIPWPNMWELPGGGREG
IETPLECLQREVWEELGLTLKEESIIWSRIYPSILDKDRLAVFVVAQISQ
KQYQEICFGDEGQEFKLMPIGDFIKAEGVIPQLQERLKDYLVGKEIDN
>stu0767 IS861, transposase (orf2), IS3 family, truncated
MVTEFPLDILLNIIKLARSTYYYHLKQLNQVDKNQSIKVEIQAIYDEHKG
NYGYRRITLELRNRGFVLNQKKVQRLMKLLGLSSQIRRKHKYSSYQGEVG
KKADNPYPTAV
>stu1130 IS657, transposase, IS200 family, truncated
MGIANFGVEGFYVDTVGRNQKRIEAYIRNQLQEDVIADQLSLFEEYDPLT
GEKNKRK
>stu0957 unknown protein
MLNGLIKKNGLSLGFGVIHKHHQHHATLASDLMEEWRPIIVDNTLMELVR
NGKLLLSHFENKDQDFILTHEGREIFARALRSRILEVHQYIELDKKRYSF
LYTADRQIKSLIRAFRELDPSLYETSYTGGH
>stu0148 1,6-alpha-glucanhydrolase (dextranase), truncated
MTGDKVWIFVKSGKGLSTVQMINMIGINASWHNDEGDVDNKTPYAQENLT
VRLSLSGKIAQEAVKIADQLYVTSPDDWATSIMRKAQARLETDEND
>stu0681 hypothetical protein
MPEGINLFQDTLIKSLKFGFVDNIKYQDGGYSPQILVNNSDEKRYVLTDL
QEELSKCAAFYFSVAFVTKNGIAMIKSQLSDLMDKKVLGKILISPYLDFN
DPDAMRELLKLKNVEVRLTPEKIQMHAKFYLFEHTGKQVLISGSSNLTHT
ALKINYEWNIKLTTTHNGEFVQNTKSEFDRIWEQSELLTPEIIETYAKKR
KKIISLTKINDEEKLPYSAEKIVPNKMQEAALEGLRNIRE
>stu1042 unknown protein
MEYTSAGVILINMNSKVLIVQYPEGHWGFPKGYKETEDKSLVDTAKRELK
EEIDISPNFFLDTNRYQFNESYGKKKIIYFIAFTINSNINLCNGLNSYKW
VDIEDLDKFPGFLSKQIVRKLVELKLDDITIVKKVNLKDNITKTNEKVDI
PPSKHAYSRLVPLELINDNIKIENIPNTIDSYYLNFTK
>stu0863 IS1167, transposase, ISL3 family, truncated
MFHFQEKNSNHFFSLIEQEIATVNPIFQTVFKTFLKDKDKVLNAMELPYS
NAKLEATNNLIKVIKRNTFGFRNFENFKKRILIALNIKKERTKFVLSRC
>stu0015 IS1167, transposase, ISL3 family, truncated
MDYLDAGTHKEIIAKLDYPAPKCLDCQGQMAKFDFQKEFKIPYLECAVYK
TLIRLRKRRFRCNVCGKNGCRRDFLSSKRTTKFQRSSTRKLLKN
>stu1405 ISSpn1, transposase, IS3 family, truncated
MRVLGLTALIRRRRKYSSYQGEVGKKAENLIQRQFEASKTMEKRYTDLPF
QQAAKNSIYYSF
>stu0398 IS1167, transposase, ISL3 family, truncated
MKKRRFQCKDYHKVTVSETSLVQKNCQISELVKQKTAQLLLNREALTHIT
EKLAISTSTVYRKLKQFQFKDDHSTLPEVLSWDDFSYQKGKLAFIAQDYE
TKKIITILDNRRQTTIRSHFFKYSKEAREGVKIVTIDMSGNYIPLIKTIF
PNSKIVLDRFHIVQHMNRTLKQTRIQIMK
>stu0510 hypothetical protein
MKTRAIIEFKDTYASMECQELGYQTKETALAIISPTGQILSSTPLFKKAY
GSNTAHIDQLPFTIDTLNITAKGLSEKVRANLEDWIAHTIILPMDYDKYF
TKHQALLHLLAESPIVESVQSLTYKTVKIYFSEALNDEHIRQLQGFILSQ
AGIYSYIGTSTVSDRNAYQALEWAKLDINGRAHNNHKPAIFHRSKSLLGG
FLQHGNQESIS
>stu1948 conserved hypothetical protein
MEELITPSEKRIINRKKGEIYDYISYSNAFVPYQGWKIHISANLIDYQSI
LDNVYHVCSIFQTPFKYINKISELFRILSKHVSQLEIGKFITIYPKNKET
FLLLLEELYDKIPKYTGVQILTDRSYKDSEIIFYRYGVMNARLINNERPK
LKFNGTFYEDITEPYYTCPPFVEDIIFNKVVDDYNIESLFHDRYQMESII
HKSGAGNVYIAIDTINEEKVIIKEARKKVYITEKILAIDLLLNEKCILKK
LKGKVDIPNYIECFTIEGNLYLVEEFIDGQRLDILKPEYNLLIKRNSSEL
GRYNKKVKKIISNLFLSLYKIHQEGIILEDISSSNILLTNDDRVFFIDLE
TAYNKNDGIIVETTNECYPKNISQKNEQRDIVKMWYCIIDLLTNSTSLLK
YDNTGVSTLNLFYKMSLENNLPKSLRKKFINDFSIVDFKNTFIIKFIEMG
LNIEKIVRMQQDLTETILSHNTFEIHGKTILESIDNYKYISNMDLKFSSD
PSFSSLYDNCNKSIDDLIGIAILDNNFELFLNYNLDELLHDMSYYQKYYL
LRLFNDTKICDRVYFIKVLNSIIKNDIKCIDGVKYIKSNEYFSPYLITGN
SGLIIELIKFSKNNNTMKFDEWIRSLSEGISYTYAKGTSLYYGLAGLGLA
NAWLYYYFKETSFLKTSIKICEHIFDFSIKQNTKTILIDPMSEEIDYTYS
KGMLGQLYFINELLNIIKE
>stu0019 IS861, transposase (orf2), IS3 family, truncated
MEKCYTDVTEFAFPNSTHKLYLSPVLDGFNSEIIAYNLSTSPNLEQVKSM
LDQSFKEEHYENTILHSDQGWQYQHQYYHQFLEDKGIQPSMSRKGNSPDN
GMMESFFGILKSEMFYGYEKTFHSLEQLEQAIVDYIDYYNNKLIKVKLKG
LISVQYRTKSFV
>stu1454 IS861, transposase (orf1), IS3 family, truncated
MNCTPKVRQKKSNFWGVFIMKLTYEDKVQIYELRKQGQTFNQLSKRFGVD
ASGLKYMTRLIERYGIEIIKKGKNCYYSPELKQEMIDKVLLEGRSQKKCK
S
>stu0205 IS861, transposase (orf1), IS3 family, truncated
MRKQGESFKQLSKRFGVDASGLRYMTRLIERYGIEIIKKGKNHYYSPELK
QEMIDKVLLEGRSQKSVSLDYCLSSGGMLPNWIAQYKKNGYTLLEKRRGR
VPKMGRKPKKKPEEMTELERLQAENEYLRVENAILKKLR
>stu1787 IS861, transposase (orf2), IS3 family, truncated
MEKCYTDVTEFAIPNSTHKLYLSPVLDGFNSEIIAYNLSTSPNLEQVKSM
LDQSFTEEHYENTILHSDQGWQYQHQYYHQFLEDKGIQPSMSRKGNSPDN
GMMESFFGILKSEMFYGYEKMFHSLEQLEQAIVDYIDYYNNKLIKVKLKG
LISVQYRTKSFV
>stu0769 IS861, transposase (orf1), IS3 family, truncated
MKLTYEDKVQIYELRNQGESFKRLSNQFGVNVSGLKYMVKLIDHYGINII
KKGKNRYYSPKLKREMIDKVLLEGWFSTKCLPRLWPLKLRVA
>stu0925 IS1193, transposase, ISL3 family, truncated
MIKYDFQKNSKISLLEQAGTPTLLRLKKCRFQCKSCRRVTVAETSIVEKN
CQISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLYQFTFKEHYDK
LPAVMSWDEFGFKKGELAFVAQNYETNELITILDNHRQTTIRNYFLKYLL
KVRQQVQFITMDMSGAYIPLARKLFPNAKIVLDRFHIIKHLGRAFLKTRI
AIMNQFDKKSLPYRALKNHWRLFQKDSRKISLNSFYSKTLRQTLAPHEVV
AKTLVFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTV
FRTFLRHKQIHQKHTRNGLFKRKTGSD
>stu1414 IS1193, transposase, ISL3 family, truncated
MGKTTVEIIELFECRQYDFQKPSKNPLLEQAGMPTLLRLKKRRFQCKNCR
RITVAKTSIVEKNCQISNLVRQKVSQLLTEKMSLTDIARRLRVSTSTVYR
KLDQFSFKEHFDKLPRVMSWDEFGFKKGELAFVETKLITILDNHRQTTIR
NYFLKYPLKIRQKVRFITMDMSGSYMLLVRRFFLNVQIIIDCFHIIQHLG
RAFLKTRIAIMNQFNKNSLPY
>stu0013 IS1167, transposase, ISL3 family, truncated
MKDKDKIMNVLELPHSNAKLEDTTNLIKDIKRNAFSFRNFDNFKTRIFIV
LNIKKERTNWSSPGCNFSSTHYS
>stu1446 IS861, transposase (orf2), IS3 family, truncated
MKQAIVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG
>stu0295 hypothetical protein, truncated
MLRLSERRRVVLNDMVALAQPLPEYDILRSIPGIAETTATSIIGELGDIR
RSIPIKSTLLLALT
>stu0814 ATP-dependent DNA helicase, truncated
MKLSDYLPSAQKVIIVSATIDIGPDVDVADLLGLSQVRKVSLPMDTLRNQ
SIWIDQTMPMIGVSSEEEYGEAIAKRLQKLSAMGYPIFVLFTSRKSMIAV
SDLLDHREVHHLTQEKNGTAFNIKKRFDRGETNLLLGMGSFWEGADFAQQ
DKVIEVITRLPFDNPKDPFYQKIESLFSKQGKSTFDSYSLPMMVLRFKQA
IGRAQRRPEQRSAILLMDNRPLVKSYGKLFIKEVSQEVTLRHAPFKQIKE
DIQEFLEKEC
>stu0126 IS1193, transposase, ISL3 family, truncated
MRLIKNTTELIGIGIKNQNIIISLVFETDTHNDKLPAVMFWDEFGFKKGE
LAFVAQKYETNELIIILDNRRQTTIRNYFLKYPLKVRQQVQFITMDMSGA
YIPLSRRLFPNAKIVLDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRAL
KNHWRLFQKDSCKLSFNSFYSKTFRQTLAPHEVVAKTLVFSKELTDYYTL
YQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVFRTFLRHKQYIKNALE
TDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRVFITLNIHKKRTYPVL
SRC
>stu1526 methylguanine-DNA methyltransferase, truncated
MKYLWGKSEPMVRLVRQSLVNPHRAVGTAVNKNPWLILIPCHRVLPSSGH
LGNYAVGEDVKCFLLRLEGLRFDNP
>stu1638 ISSth3, transposase, IS30 family, truncated
MRPLITGRLDTVVSSRGKNKGFLVAFLERKTRFYLASKIPDRTTKAIFSA
IEQLCRLFPKETLITFTSDRGKEFACYPLVERKQ
>stu1784 IS861, transposase (orf1), IS3 family, truncated
MKLTYEDKVQIYELRKQGQTFNQLSKRFGVVASELRYMKRLIERYGIEII
KKGKHRYDSPELKQEMIDKVLLEGRSQKSVSLDYCLPSGGMLPN
>stu0870 ISSpn1, transposase, IS3 family, truncated
MNCTPKVRQKKSNFWGVFIMKLTYEDKVQIYELRKQGKNRYYSPKLKREM
IDKVLLEGCSQQSVCLDYGLSN
>stu0068 ISSpn1, transposase, IS3 family, truncated
MEKCYTDVTEFAIPNSTHKLYLSPVLDGFNSEIIAYNLSTSPNLEQVKSM
LDQAFTEEHYENTILHSDQGWQYQHQY
>stu1781 IS1193, transposase, ISL3 family, truncated
MLETDYSNAKLEATNKLIKDIKRLGFGFRNFINFRKRVFITLNIQKEKTY
PVLSRC
>stu0658 conserved hypothetical protein
MTWRVVHVSQSEKMRLKLDNLLVQKMGQEFTVPLSDISIIVAEGGDTVVT
LRLLSALSKYNIALVVCDNEHLPTGIYHSQNGHFRAYKRLKEQLDWSQKQ
KEKAWQIVTYYKINNQEDVLAMFEKSLDNIRLLSDYKEQIEPGDRTNREG
HAAKVYFNELFGKQFVRVTQQEADVINAGLNYGYAIMRAQMARIVAGYGL
NGLLGIFHKNEYNQFNLVDDLMEPFRQIVDVWVYDNLRDQEFLKYEYRLG
LTDLLNAKIKYGKETCSVTVAMDKYVKGFIKYISEKDSSKFHCPVVSSLE
WRK
>stu0743 IS1193, transposase, ISL3 family, truncated
MSWDEFSFKKGEFAFVAQNYENNKLIPILDNRRQTTIRNFFLKYPLKVRQ
KVRFITMDMSGALYATSSKTFSKCPNYY
>stu0822 IS1193, transposase, ISL3 family, truncated
MKYPLKVRQKVRFITMDMSGSYMPLVRRLFLNAQIIIDCFHIIQQLDRAF
LKTRIAIMNQFNKNSLPY
>stu0864 IS1167, transposase, ISL3 family, truncated
MSSPFSTDELKQPSETTFYAILERLEIGSKLITMDMFSPYYQLAKQLFPN
AKIVLDRFHIVQHLSRDMNRVRIQIMNQFDRKSQEYRALKRYWKLIQQDS
RKLSDKRFYRPMFRMHLTNKEILEKLLSYSDSTMNSINFSCSISKRKTQI
ISSVSSNRK
>stu1786 IS861, transposase (orf2), IS3 family, truncated
MVSGGFRLDLLLETARLSRSTYYYQLKQLDGHDKDEETKGEIQEIYYEHK
GNYGYRRITLELRNRGFVVNQKKVQRLMKLLGLSSQIRRKHKYSSYQGEV
GKKADTPYPTAA
>stu1452 IS861, transposase (orf2), IS3 family, truncated
MVSGGFRLDLLLETARLARSTYYYQLKQLEGHDKDEETKGEIQEIYYEHK
GNYGYRRITLELRN
>stu0956 hypothetical protein
MSDLYSQRSNYYLSLSEQRIIIKNDNKEIVKEVSISLVDNVLLFGNAQLT
TQLIKALSKNKVNVYYFSNVGQFISSIETHRQDEFQKQELQAKAYFEEDF
RLEVARSIATTKVRHPIALLREFDTDGLLDTSDYSRFEDSVNDIQKAYSI
TEIMGYEGRLAKSYFYYLNLLVPNDFHFNGRSRRPGEDCFNSALNFGYSI
LYSCLMG
>stu0183 conserved hypothetical protein, putative protein kinase
MQFSFDSDFKKIEKCKTLKDDYYKYVEFGSEIPRQGWKIHISSNLDSYQI
VLRLIVEYCTKYKIDFKYIYNNKVLKYFLSSDCFTTQAGKCITIYPKNDK
LFKNIVLDLADILIGFEGPVVISDMQYRDTNIFYRYGVMAAQSDYLLIGG
TPIMDNRSFFELPNGIEDPFENINDEYHNVATFLGCTVEPTMIIHESASG
NVYESKYDGNVTILKEGRKNILGTNSTAIGDIKNEEKIIKQLETLEGIPK
YRLSFYEWGNYYLVESKLKGDMLSLIASSFLFESIPFSDLVMKLLILFDS
VHQKGIIINDVSSNNIFVDFTDDVYVSLCDFGSSYNIVDSNSEEVLSIKS
KGAGMTMTFYDHSHIELGDKERDFHKLGYTLMNYVFPINQYLRHGVSGNE
VLKMFRQFCVMTYPSDSIFKVIELLIRQPLNWRKDLETCLRQSKISTVFR
KRINDRTNRYFTAEFMTKSENYGDSCSLIYKKRYYFLVPEFSEWLEKNYG
ESVFSNSFKIFDKNYEELNIEISEYGLTQQLGNILFWVKNCNEFSFHSGI
VGLGLEVLYELKFNHLDILYKEILDLIYFRIKYSISNDNIVENNGIYDGK
LGIVLFLVEYYKLTKDDIILLEAKRLFTEASHAIVQKENYIEFVNSFSDS
ISTPYVNDGLSGYVLLSLQLWELTGDENYFKKEYIRFLTNISFCKRRDLF
SGQLGISYVLYKVSQSNFSTIQELNLTNKAMRQLSNSSIFEFREKNRLHI
YDYYPNNEERDVTHEYQFMFNLFLTHQEV
>stu0038 IS861, transposase (orf2), IS3 family, truncated
MEDKGTQPLMSRKGNRPDNGMMESFFEILKSEIFYGYEKTFHSLEQLEQA
IVDYIDYYNNKRIKVKLKGLSPVQYRTKSFG
>stu0069 ISSpn1, transposase, IS3 family, truncated
MKQLDGHDKDKETKDEIQEIYYEHKGNYGYRRITLELRNRGFVVNQKKVQ
RLMKLLGLSSQIRRKHKYSSYQGEVGKKADNPYPTAV
>stu1451 IS861, transposase (orf2), IS3 family, truncated
MINHKKVQCLMKELDLAARIRRKRKYSSYKGEIGKKADNFIQRQFEASKP
YEKCYTDITEFAIPVSSQKLYLSPVLDGYNSEIIAYQLSTSPNLEQVKAM
LTQAFPEEHYDQTILHSDQGWQYQHQFYHDFLKKNGIRPSMSHKGNSPDN
GMMESFFGVLKSEMFYSFEKQFNSLDELKQSIINYIDYYNNKRIKVKLKG
LSPVQYRTKSFQ
>stu0024 IS1193, transposase, ISL3 family, truncated
MLFHFQDKRVNEFFQPIEEKISKVNYYFQTVFRTFLRHKQYIKNAPKTQS
SHAKLEGTNKLIKDIKRLGFGFRNFINFRKHVFVTLNI
>stu1088 IS1167, transposase, ISL3 family, truncated
MSIYKKSHMTYNEKCSNYHFRKTHMEQLNLITNFLRIKDKNITITDEYDM
GTHLELHGHLVYTAPKCPSCKGLMAKYDFQKASKIPYLETAGYPLLIRLR
KRRFKCKDCGKMAVAETPLVKKNHQISVAVNQKIAQLLIENQAMKHIGHR
LSISTSSAMRKLNEFKFETDWNILPEVMSWDEYAFKKGKMSFIAQDFDSL
NVRLFVNCSG
>stu0067 ISSpn1, transposase, IS3 family, truncated
MFYGYEKTFHSLEQLEQAIVDYIDYYNNKLIKVKLKGLSPVQYRTKSFV
>stu1904 ISSth4, transposase, IS30 family, truncated
MNELVTKGSLMSYHHFTIEERESILVYRTQGLNLSQIAKLLHRYPSSISR
E
>stu0107 IS1216, transposase, IS6 family, truncated
MDIWLRKKRDTQTAYAFLERLVKQFDEPKVVVTDKAPSITSAFKKLREYG
FYQGTEHCTIKYLNNLIEQDHRPVKRHNKFYRSLRTTSTTIKGMEAIRGL
YKKTRKEGTLFGFSVCTEIKVLLGIPA
>stu0025 IS1193, transposase, ISL3 family, truncated
MAETLIVEKNHQISNLIRQKVRFIKMDMSGAYIPLVRRLFLNAQIIIDRF
HIIQQLVQAFLKTRIAIMNQFNKKPLPYRSLKITGDSP
>stu0963 conserved hypothetical protein
MTYKLYIMTFQNAHFGSGTLDSSKLTFSADRIFSALVLESLKMGKLDAFL
AEANQDKFTLTDAFPFQFGPFLPKPIGYPKHDQIDQSVDVKEVRRQAKLS
KKLQFLALENVDDYLNGELFENEEHAVIDTVTKNQPHKDGNLYQVATTRF
SNDTSLYVIANESDLLNELMSSLQYSGLGGKRSSGFGRFELDIQNIPLEL
SDRLTKNHSDKVMSLTTALPVDADLEEAMEDGHYLLTKSSGFAFSHATNE
NYRKQDLYKFASGSTFSKTFEGQIVDVRPLDFPHAVLNYAKPLFFKLEV
>stu1449 hypothetical protein
MLWCLLWCVCYKKSMEIFDTHTYLNADDFAGREAEELALAKEMGVTRHNV
VGFDVPTIKRAIELAE
>stu0961 conserved hypothetical protein
MTILTDENYVDIAEKAILKLERNTRNRKNPDAFFLTTSKLRNLLSLTSTL
FDESKVKEYDALLDRIAYLRVQFVYQAGREIAVKDLIEKAQILEALKEIK
DRETLQRFCRYMEALVAYFKFYGGKD
>stu0014 IS1167, transposase, ISL3 family, truncated
MAVAETSLVQKEPPNFNDHQPENYSKINRESLYDRYHRNFIGSVSTSTVI
RKLKEFEFKSDLNHLPEHMSWDEYSFKKGKMSFIAHDYDTRKIVSILDGR
TQATIRNHFLRYSRQVRCRVKVITIDMFSPYYDIARKLFSNSKIILDCFH
IVQHLNRAMNRVCIQIMNQFDRRSHEYKALKRYWKLIQQDSRKLSDKRFY
QPTFRSHLTNKEVLEKLLSYSQELRQHYNLYQLLLFHFQEK
>stu0095 Integrase/recombinase, putative, truncated
MFTYNDRSNNINLPLHTDYLNYRMNSIRRRHPELSPASPHKLRHTGATLA
RKSGVPLEIISEALTHSDKQITKTYVNTKI
>stu1273 ISSth5, transposase, IS110 family, truncated
MKDAEWIAQLGRCGLIEPSYIPNPEVMQLRLLTRRLRSYKQRQTQIKNKI
HNLLQPTNIKLTSYLSVIFSKTGQSLLMLFINGELIDYDNVTACIHKHVK
ASPEEFNVGHEWEVVSEGSISLGPKPRRISIVSKTHEKINE
>stu0564 conserved hypothetical protein, MutT/nudix family
MEFEEKTLKRELKFKGHIFEVAVDEVLLPDGKTAGRELIFHKGAVAVLAI
TPEGKIIIVKQYRKAIEAVSYEIPAGKLEVGEAGDEMAAAARELEEETQY
RGELKLIHEFYTSIGFCNEKIKLYVATNLHPVENPRPLDEDEFLEIYELT
YEECMELVASGAIQDAKTIIALQYYALHFGGK
>stu0680 conserved hypothetical protein
MLFIVHREQILKKSLIDFQKVLGFNPSEGHIYHSGDDLTGKKYIFATIQT
LSREDNLKAFSKDFFDYILIDEVHKAGADSYKKVMGHFTPNFYLGMTATP
ERTDGQNIYEIFDYNIAYEIRLQDALENDMLCPFVYFGVKDIEIDGQLID
EKSNISNLTSDERVKHILNKIDFYGVCNNQVRGLIFCSSKAEARELSKKL
NQHGKRTIALTGDDDINYREKVVKQLEDGKLEYILTVDIFNEGIDIPSVN
QVVMLRNTQSSIIFVQQLGRGLRKHKSKDYVTIIDFIGNYKNNYLIPIAL
FGDKSMNKDNYRRELREPNILSGLTTVTFEEVAKEQIFKSITNTVLSNMK
ILKDAYTDLENKLGRTPMLIDHLTFDNIDPIVFFNNNSFKNYADVINKFS
NKAIELTDTESNWLSFITFELLPGKRKHELLLLQELIKKGEISKDKFIKI
LETEQLSTKDSIISSVKNVLSLQFLKSQEVKKFGTEPLVTLEKNVYKLNP
EVIDSFKNSDFTLLFKDVIEAGLYKTNDYPEIFTIGQKYSRRDVCKLLNW
FKDEPPLNIGGYKIDKNTNTCPIFITYHKDNEISDTIKYEDELLNETTLK
WFSKNKRTLESPDVKTIINSPENGLDLKLFIIKDDAEGGDFYYLGDLTIV
PSTVEELVRPLESGNESIVTMNFKLDNPVPDTLYRYITNK
>stu1567 conserved hypothetical protein
MTEKDSKAYMYVVECADGTLYTGYTTDVERRLKTHNAGKGAKYTRARLPV
KLLYSEAFASKPEAMSAEALFKKKSREKKLAYIKEHTEK
>stu0234 conserved hypothetical protein
MTMKETFTLVATAAAGLEAVVGRELRELGYETQVENGKVRFQGDVRAIAE
TNLWLRAADRIKIVVGEFPARTFEELFQGVFALDWENYLPLGAKFPISKA
KCVKSKLRNEPSVQAISKKAVVKKLQKYFHRPEGVPLQETGAEFKIEVSI
LKDKATVLIDTTGASLFKRGYRTDKGGAPIKENMAAAILELSNWYPDKPL
IDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEAWNWVGKDLVQSVRDEAD
SKANYDVALDIMGCDIDSRMVEIAKANAREAGLEDVVKFKQMRLQDLKTD
KINGVIISNPPYGERLLDDKAVDILYNEMGQTFAPLKTWSKFILTSDEQF
ESKYGMKADKKRKLYNGTLRVDLYQYFGERVRRSEARKVN
>stu0813 ATP-dependent DNA helicase, truncated
MVSWICYNKVVMSEKSTNKYAIVDLEATSASSTACIIQVGIVIMQNGRVI
DEFASDVNPHQKLDNHIVHLTGITDQQLSQAPDFSEIARTIFELIEDCIF
VAHNVKFDANLLAEALFMEGFELRTPRVDTVELAQVFYPTLEQYNLSYLS
RVLNLDLAQAHTAIEDARATGKLLLHLMDKIASLPRQTIDMLLTFSDNLL
FESELVIRDAIKGKTNSLSKEYIMLEESGIVLRRPLTYMSERKLSQDFET
NIALLGLESRAKQEEFAKTVRREFDNIDISMIQAQTGIGKTYGYLIPLLA
QADIDKVIVAVPTKLLQNQIMSQEAKALAEVFNINFHSLKGPQNYIKLDA
FYQTLFRQDSNHLINRYKMQLLVWLTETETGDLDEIKQKQRYMAYFDEIK
HDGKLKADSLFVEYDFWKQSCQKSQEARVVVTNHAYLLTRMEDDHDFVRG
KTLVIDEGQKMVLALEQFSRYQVNLTTLLQHIHRILDSGNQTLLQQRLLE
NLQFEVRHLIQEHQQFPQKQYNRQQLNRLLQTISELEGESDVMEMVSSLN
TPHYSQF
>stu0655 site-specific DNA-methyltransferase (adenine-specific) LlaI, truncated
MMCYLGNKTKLLTFIEKVIDKYKIEGETFADLFAGTSSVGDYFKGKYTVY
SNDYMYFF
>stu0962 conserved hypothetical protein
MTFAKIKFSAQIRLETGLHIGGSDAFAAIGAIDSPVIKDPITNLPIIPGS
SLKGKMRTLLAKVYNEKVAEKPSDDSDILSRLFGNSKDKRFKMGRLIFRD
AFLSNADELDSLGVRSYTEVKFENTIDRITAEANPRQIERAIRTSTFDFE
LIYEITDENENQVEEDFKVIRDGLKLLELDYLGGSGSRGYGKVAFEKLKA
TTVFGNYDVKTLNELLTAEV
>stu1780 IS1193, transposase, ISL3 family, truncated
MKYPLKVRQQVQFITMDMSGSYIPLARKLFPNTKIVPDRFHIIQHLGRAF
LKTRIAIMNQFNKNSLPY
>stu0018 IS861, transposase (orf2), IS3 family, truncated
MVSGGFRLDLLLETARLSRSTYYYQLKQLDGHDKDEETKGEIQEIYYEHK
GNYGYRRITLELRNRGFVVNHKKVQRLMKLLGLSSQIRRKHKYSSYQGEV
GKKADNPYSTAV
>stu0766 IS861, transposase (orf2), IS3 family, truncated
MEKCYTDVTEFAIPNSTHKLYLSPVLDGFNSEIIAYNLSTSPNLEQVKSM
LDQSFTEEHYENTILHSD
>stu1496 MutT/nudix family protein
MSRSQATILTNMCLIEDGRGNIVMQIRDPKRYSWSGAALPGGHIEAHEGL
VESVIREVKEETGLTIKSPKLVGMKHWYTTDDERYLVFLYRTSDFEGDLR
STEEGEVRWVAREKVVHMDLAYDMLNLLRVFEEDNLSELFYRERLENDFL
REFW
>stu0207 IS861, transposase (orf2), IS3 family, truncated
MSRKGNSPDNGMMGSFFGILKSEIFYGYEKTFHSLEQLEQAIVDYIDYYN
NKRIKVKLKGLSPVQYRTKSFG
>stu0768 IS861, transposase (orf1), IS3 family, truncated
MLNNWIAQYKKNGYTLLEKRRGRVPKMGRKPKKKPEEMTELERLQAENEY
LRAENAILKS
>stu1897 ISSth4, transposase, IS30 family, truncated
MNELVTKGSLMSYHHFTIEERESILVYRTQGLNLSQIAKLLHRYPSSISR
E
>stu0037 IS861, transposase (orf2), IS3 family, truncated
MVTEFTLDILLNIIKLARSTYYYHLKQLNQVDKNQSIKVEIQAIYDEHKG
NYGYRRITLELRNRGFVVNQKKVQRLMNFLGLSSQIRRKRKYSSYQGKSW
QESR
>stu0964 hypothetical protein
MKNDYRTFKLSLLTLAPIHIGNGEKYTSREFIYENKKFYFPDMGKFYNKM
VEKRLAEKFEAFLIQTRPNARNNRLISFLNDNRIAERSFGGYSISETGLE
SDKNPDSAGAINEVNKFIRDAFGNPYIPGSSLKGAIRTILMNTTPKWNNE
NAVNDFGRFPKENKNLIPWGPKKGKEYDDLFNAIRVSDSKPFDNKSLILV
QKWDYSAKTNKAKPLPLYRESISPLTKIEFEITTTTDEAGRLIEELGKRA
QAFYKDYKAFFLSEFPDDKIQANLQYPIYLGAGSGAWTKTLFKQADGILQ
RRYSRMKTKMVKKGVLKLTKAPLKTVKIPSGNHSLVKNHESFYEMGKANF
MIKEIDK
>stu1611 conserved hypothetical protein
MKIGRLLAIGTLACGAYYAYKRREDIKEEILDLNQSRENISHDLDRIKRN
LDIIKEQNLVLDDIKQDLSYKTRVFQKDLEPRLSIIQERLKKYQSDDNEK
GK
>stu1126 conserved hypothetical protein
MTQAIMADEQNKTYTEQGIKPLFSIPKTARINIVGQAPGIRAQESGLYWN
DPSGDNLRDWMGVSREEFYESGLFAIVPMDFYFPGHGKSGDLGPRKGFAD
KWHERVLDLAPNIQLTILVGNYAQHYYLHQKSSTKLTDTVKHYRDYLPDY
FPLVHPSPRNNIWQAKNPWFMKEVLPDLKELVQKILSQ
>stu1272 IS1193, transposase, ISL3 family, truncated
MAETLIVEKNHQISNLVRQKVSQLLTEKMSLTDIARRLRMSTSTVYRKLD
QFTFKEHFDKLPRVMSWD
>stu0679 MutT/nudix family protein
MRETFLNNKFKFACRDSFLIEYYLEECYMSKKIINVVAAAIEKDGKIFCA
QRPEGKSLGGYWEFPGGKLKEGESPEEALIREIYEELNSKIEIISFVNEA
SYDYDFGTVVMKTFHAKLVCGNLDLLEHQDSVWLEPSRLKTLNWAPVDRP
AVELLSK
>stu1415 IS1193, transposase, ISL3 family, truncated
MLETDYSNAKLEATNKLIKDIKRLGFGFRNFINFRKRVFITLNIQKEKTY
PVLSRC
>stu0726 IS1239, transposase, IS30 family, truncated
MLGKAPHTINNEVKRGTTLQQVRKGLYKKVYSADYAQTVYQTNRKPSVKK
IILTKEMKEKILHYAKQKFSPEMMVKKKKMKVGISTIYYWFHNGHLGLTK
ADMLYPRKGKSVKKQASPNFKPAGKSIEDRPEVINLRLENGHYEIDTVLL
TRVKNHCLLVLTDRRSRHQIIRLLPNKTTESVNQALEGILREHHILSITA
DNGTEFSRLAEVFPEERIYYAHPYSSWERGTNENHNRLIRRWLPKGTKKT
TLKEVAFIENWINNYPKKCLDYKSPSEFLMGG
>stu0842 IS1191, transposase, IS256 family, truncated
MYGHHYSPATISNISKATQENVATFHERSLEANYSVLFLDGTYLSLRRGT
VSKECIHIALGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVS
LVVTDGFKGLEEIINQAYPLAKQQRCLIHISRNLASKVKRADRAVILEQF
KTIYRAENLEMAVQILENFIAEWKPKYRKVWRIRIIF
>stu0036 IS861, transposase (orf1), IS3 family, truncated
MKLTYEDKVQIYELRKHGQTFNQLSKRFGVDASGLRYMMRLIERYGIEII
KKGKHRYDSPELKQEMIDKVLLEGRSQKSVSLDYCLSSGGMLPNWIAQNK
KNGYTLLEKRGGRVPKMGSKPKKKPEEMTELERLQAENEYLRAENAILKK
LR
>stu1300 alkD, DNA alkylation repair protein
MEECWQHPYREFQYIAMGYLDKKKKEFRPEDFSKLKELAQTKSWWDSIDQ
LDRIIGEITFYYPETKDFVRQWSLDEDFWLRRIAIDHQLIRKELTDTDLL
AEVICNNFGQTEFFINKAIGWSLRNYSKVNPDWVRDLLITMLVKWHLLVL
GKQESICRI
>stu1676 blpT, immunity/modification protein
MMKKRTLTLWMMSSALLLNLSVGTALADEVVETGADNSPKVEATESTPVE
QPSDSQEQSLPEDKEAPAATESVTLAESEEETAKNDIPAVSREEYDANVA
DLPKISLDDVRNAFTEDGQAHTIYFGRGTCYYCRQFSPELKVLNQLMDGR
LEYYDIDREDFDRNYVFGEIGIPGTPTLLYLENGQLLSGWVGGGPAQTVY
DHLASSSPRFMTLNQEQTTISEPQTKTVRPTRVTEESTKEKSLPTVQPQP
MSTVQKELNAQTGQMAPMTDKVADTKEFPKTNDGEQSLVSFVGALAILAS
LMLALRYYIK
>stu1562 comEA, late competence protein required for DNA binding and uptake
MKEKILAYVKDNRLFVSVIAVLMVIFCFFLWMTCGAGNSMEAETSYTDVT
ALSTSSSKQSSQSLSEASSQSKTEGSEKVKSKVTVDVKGAVVNPGVYTLK
AGARVTDVIQEAGGITEDADAKSVNLAASLSDEEVIYVANKDENVSVLDQ
TGTGQVSDKGGQAVSKDGKINLNTATSEQLQTISGIGAKRAEDIIAYRES
HGGFQSVDDLKNVSGIGDKTLDKIRESLYVA
>stu0368 comFA, late competence protein required for DNA uptake
MIPKEYYGRLFTKEQLPVDYLSEAVKLESMIKVDKKLRCKRCYSRIEEDW
QLPNGQYYCRACIVFGRNQEGKELYYFPSEKSEVDFPVLKWSGKLTPYQN
EVSEKLLKTYKNQKHSLVHAVTGAGKTEMIYNIVAYVLENKNRVVIASPR
VDVCRELFLRMQKDFTCSISLLHADSEPYDGSPLVIATTHQLLKFYHSFD
LIIVDEVDAFPFVGNVMLNHAVKQAKTETGRYIYLTATSTLALEEQVRLG
AIEKHHLASRFHGNPLVLPRFFWQGRLQKSLTSEKLPRPLIHQIKKQRKS
NFPLLIFFPNIALGEKFSITLKKYLPTENIAFVSSKSEERSTIVEKFRKK
ELSILVTTTILERGVTFPQVDVFVCMANHYLYTSSSLIQIGGRVGRSPER
PTGKLYFFHEGLSKSMLQCREEINAMNKKGGFENEVSTM
>stu1957 cshA, chromosome segregation helicase
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGI
GKTSIASAIAGTTKFAFRTFNATVDSKKRLQEIAEEAKFSGGLVLLLDEI
HRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPL
SNEDIKEAILNVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLD
LAVMSTPASGNGQHHITLDIVENSLQRSYITMDKDGDGHYDVLSALQKSI
RGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTA
LEAAQKIGFPEARILIANVVIDLALSPKSNSAYKAMDAALADLRKSGNLP
IPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR
>stu1261 deaD, ATP-dependent RNA helicase
MFKNFPEQWQNLLKEKGITTETAIQKELFTPITEGENILGISPTGTGKTL
AYLFPLLLSLKPKKAQQLLILAPNSELAGQIFDVTKQWAEPLGITAQLFL
SGSSQKRQIERLKKGPEILIGTPGRVFELIKLKKIKMMNVNTIVLDEFDE
LLSDSQYHFVIKISHHVPRNHQMIYISATNKIDSQNLVENTIVYDLSNQE
LDTIKHYYISVDKRNRVELLRKFSNIPNFRGLVFFNSLSDLGATEERLQF
NGASAVSLASDINVKFRKVILEKFKNHEISLLLGTDLLARGIDIENLEVV
INFDIPRDREAYTHRSGRTGRMGNEGRVISLVSHPEDLKKLKKFAKVSEI
VLKNQEIHEK
>stu1656 dinP, DNA polymerase IV, damage-inducible
MLEFPLINDTSRKIIHIDMDAFFAQVEMRDDPSLKDKPVIIGNDPRKTGG
RGVVSTCNYEARKYGVHSAMSSKEAYERCPNAVFISGNYSHYREVGMQIR
EIFKCYTDLVEPMSIDEAYLDVTTNKLGIKSAVKVAKLIQYDIWQELHLT
CSAGVSYNKFIAKLASDFQKPAGLTVVLPEEAQEFLKKLPIAKFHGVGKK
SVERLHDMDIYTGADLLKISEITLIDRFGRFGFDLFRKARGISNSPVKPN
RVRKSIGSERTYGKLLYNEDDIKAELTKNAKRVAESAQKAKKVGRIIVIK
VRYSDFSTLTKRMTLDKSTQDFDTIDRISHSIFDQLEENSSGVRLLGVTL
TGLEDQEGRQLDLDNLA
>stu0001 dnaA, chromosomal replication initiator protein dnaA
MTEKEHFFWNKLLELAKEELTQATFDYYVLDTKLIKIQDNVATILLEEVK
KLFWEKNMQSFILMTGFEVYNSEIKVEYVFDEALVSETKPTLANNDFSNK
REQQTPDLPTLNSDLNSKYTFDNFIQGDENRWSVAASLAVADSPGATYNP
LFIYGGPGLGKTHLLNAIGNKVLHDNPQARIKYITAENFINEFVLHIRLD
KMDELKLKYRHLDVLLIDDIQSLAKKSTQATQEEFFNTFNVLHDNNKQIV
LTSDRNPDQLNEMEERLVTRFKWGLTVNITPPDFETRVAILTNKIMDYDY
HFPPETIEYLAGQFDSNVRDLEGALKDISLVANVRQLDTITVEVAAEAIR
ARKIDGPKLTLIPIEDIQSEVGKFYNVTVKEIKATKRTQNIVLARQVAMY
LAREMTDNSLPKIGKEFGGRDHSTVLHAYNKIKNMLAQDDSLRIEIDTIK
NKIK
>stu0320 dnaB, chromosome replication initiation / membrane attachment protein DnaB
MRPIEEFVYVGNQVIVPDQASLMRCYYPIIGGEGYALYQYFVAFYDNGNH
RHKFATILNHLNFGMQPLQESLAVLTAVDLLAFYHSPQGIYVVELKSPLS
IEQFLKHAVYSSLLEQKIGEPAVDALKPTSLHGLQDLSKRFSDVFTDERL
AQKSVSEIKPKNSFDLISFRNRMQADGLVFTDEKTDVPEIYKLSETYDMN
WYDTYLLSKKTAVNHRIIVKRMQVQLEQAQAQKLGGDSALTETEKKILKA
VKSGKPVDYLQSAKGPGGTVTNSEKKILTDLAQRGFMDEVINLMVAYSLG
RTRSTNVNREYISKVANDFDFKKIVTAEQGLLALRSGYDKKSQRAKDDSK
KKTNVPSWSDPDYDNQTNQADQAKLDEIRRRALAKLEKGKE
>stu1221 dnaD, DNA replication protein dnaD
MSFFEQYRTGNLVLPNALFFHFKDIFPSADDFLVWQFLYLQTTTQIGEVA
SSQIAQATGKTPTEVNKSITTLTEAGLLDFTTVKVNNEIKMVVDASPALA
VLDKLVSSENSTTGPVAGQPTNTQLIKQLTDELEQALGILNPMVIEDLNK
EIQEEHTDPELIREALKEAVFNRKTNWNYIKGVLRNWKLSGITTKIQVEE
RRLEHQGKKQHHQVSDEFKTGMDAARQLWGGQ
>stu1198 dnaE, DNA polymeraDNA polymerase III alphase III alpha subunit
MFAQLDTKSVYSFMDSVVDLNTYVKRAKELGYQSIGLMDRDNLYAAYHFA
QLAIRNGLRPLIGTEANLFYEGRKIPFRLLAKNNQGYKNLIKLATELSSG
QREFTYFSDYLNDIALILPSEDWEPGMSLGSEVFIGVRPEDAGKEFDYPV
VPLHTVRYFENADRSTIQTLHAISQNVSLSEVSICPMNQLLFSAKEMEEA
YSKLPEALNNLNQLVSDVSYQFDTNLKLPRFNREMPAVDQLRQLAQSGLD
SKALREPAYQERLDKELSIIHQMGFDDYFLIVWDLLRFGRSRGYYMGMGR
GSAAGSLVAYVLDITGIDPVKNDLLFERFLNKERYSMPDIDIDLPDIYRS
EFLHYVRDRYGSKHSAQIVTFSTFGAKQAIRDVFKRFGAKEFELSQLSKK
ISFRDTLTTVYEKNMSFRQLINQRQEFQRAFEIAKAIEGQPRQTSIHAAG
IVMSDDDLTNHIPLKAGEDMMVTQYDASAVEANGLLKMDFLGLRNLTFVQ
KMKEKLEEEQGIAIDIKSIDLEDSQTLALFASGKTKGIFQFEQAGAINLL
KRIKPAKFEEVVATTSLNRPGASDYTDNFVARKYGKEKVDLIDPVVAPIL
EPTYGIMLYQEQVMQIAQVFAGFSLGKADLLRRAMSKKDANEMSKMSEQF
MEGSRQLGRDPQVAKRLFSMITKFAGYGFNKSHAYAYSALAFQLAYFKTH
YPQIFYDVMLNYSSSDYIRDAIENGFSLASLDINRIPYMDKISDGKIVLG
LKTIKGLPRDFALWIIEDRQQNGKYISIEDFLTRIPSKYQKVDILTPLIQ
IGLFDRFEPNRRKIIGNLSNLFTFVNELGSLFAESSYSWVEYEDYSQTER
YSIEQDLLGVGLSTHPLHLAQKMASRPYQPISELTLNSKATVLVQLESVR
IIRTKKGDQMAFLSVFDGVNKLDVTLFPETYFYHKDKLSEGSLFYLEGRT
QERDGRLQLILSNIEEASTERFWILLENHNKDLEVSHILAKYPGHIPVVI
RYQGSKETIVSQRYKVSKNEELSRELAPFVLKTVLR
>stu1489 dnaG, DNA primase
MVIDKTLIEDIKSSTNIVDVIGEVVSLNRAGRNYLGLCPFHKEKTPSFNV
IEDRQFYHCFGCGKSGDVFKFLEEYRQISFQESVKVLADRLGIAVSIDVP
RQVQQQNSPNQAFYDLHEDALKFYHAVLMTTKIGEAARAYLYERGMTDEL
LKTFQIGLSPDEPDYLYQSVSKKYDEEVLTESGLFNLSENNRIFDTFKNR
IMFPLKNEFGKTIGFSGRVWTKEDIEKGQAKYKNTRATRIFNKSYELYHL
DQAKPVIQKTHEVYLMEGFMDVIAAYRAGHVNAVASMGTALTPEHVNRLR
KLTKKIVLTYDGDKPGQNAIAKSLELLSDFQVDIVKIPDSMDPDEYLQKT
SEKALGKLLVESRISDVEFWIGQLKPANVDNLQAEIAYVEQIAKIIAKSP
SVTAQNSYISKVADLLPDFDFFQVEQAVNNARLTMRNQQMAQLSAASNSA
YESSASGFRGTVKLPSTPKITGLRRAENQLFHRMLNHPMILNDYRMRDDF
FFQTPELEELFQILKRDGQIDTVALSVLSQEVQTAYYQVLEEILPPETNL
EEVQAIEERRNHFLREQDFRKQSKQIRESSNHGDVDAAVEALQMLIAQKR
DME
>stu0490 dnaH, DNA polymerase III delta prime subunit
MKLAECQRKLFEEFSQIIRENRLSHAYLFSGDFGSLDMAIWLAQSRFCLT
PEDGLPCSHCRPCRLIAQGDFSDVKLVEPQGQIIKTDIIRQLTREFSQSS
FEGHAQVFIIRDADKMHVNAANSLLKFIEEPQSQIYIFLLTADDSRILPT
IKSRAQLFYFPKNKAYLEDLLQREGLLLTQAKVLADFAKDETQALSLSKD
KKVLDVIDIVERFEQSLLANHDLLYLDVAKLAVQCSEKSEQEMVWAFLTY
QLGKEIQNPQARRWLDLVFKAREMWLANVSFQNAMEYLVLS
>stu0321 dnaI, primosome component (helicase loader) DnaI
MERVGQTLNRTGYHGSGNATDLTKQILADPRVAGFIQEHGLSQDEIKRSL
PKFNQFLVECRKVKEGDVSYIAKGYEPILTMNEGYADVTYKETRQLKEQQ
EQQAISKRINLVSLPQSYRKITFADIALDDVARVDTFETLVDFVANYPSP
DQKGLYIYGDMGVGKSFMLAAMAHELSETKKVATTIIHYPSFTIDVKNGI
KDGSVKEQIDAVKEAEVLVLDDIGAEQFSSWIRDDVLQVILQYRMIEELP
TFFTSNYSFADLEAKLSNGRQGDETWQAKRVMERIRFLAKEVHLRGVNRR
>stu0002 dnaN, beta subunit of DNA polymerase III
MIQFAINKAYFLQALHTTRRAISSKNAIPILSTIKIEVTSDGIYLTGSNG
QISIENSISASEENAGLLITQPGSILLEANFFINVVSSLPDVTLTFEEIE
QYQVLLKSAKTEITLKGKDAEQYPRIQEVDSLTPLIMDTKMLKSIIAETS
FAASTQESRPILTGVHFVLSNHKDLKAVATDSHRMSQRQLVLEHSADNFD
VVIPSRSLKELSAVFSDGIENLEIFFSANQILFRSETISFYTRLLEGNYP
DTNRLLSDSFETEVVFETSTLRSAMERSYLISNASQSGTVKLEIINGNVS
AHVNSPEVGKVNEDIDVLDVSGSDLIISFNPTYLIDALKALKSESVRIRF
ISPVRPFTLTPADDSENFIQLITPVRTN
>stu1601 dnaQ, DNA polymerase III epsilon subunit
MENLETYIAFDLEFNTVDGVSHIIQVSAVKMGQHKEVDQFDSFVYSNVPL
QSFINGLTGITADKIAKAPKLESVLAEFKAFIGNTPLIGYNALKSDLPIL
AENGLNLEEQYALDVFDEAFDRRASDLNGIVNLKLTSVADFFGIKGHGHN
SLEDARMTAQIYKKFLELDDNAELLEQQEEVSNNPFAALDLGGLFD
>stu1174 dnaX, DNA polymerase III subunits gamma / tau
MYQALYRKYRSQTFGEMVGQKVISTTLRQAVESGKISHAYLFSGPRGTGK
TSAAKIFAKAMNCPNQVDGEPCNHCDICRDITNGSLEDVIEIDAASNNGV
DEIREIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVV
FILATTELHKIPATILSRVQRFEFKSIKQGAIKEHLASILEKEGLTFDDE
ALTIISRHAEGGMRDALSILDQALSLSADNNVSQSVAEEITGSIGLTALD
SFVASVRNQDTTKALSNLETLFDNGKSMSRFATDLLEYFRDLLIVKSGGE
NSHHSPLFEENLSLEQDRLFQLIDLVTSALPEIKTGTHPKIYAEMLTIKL
TETSAQVRQDIPANLQEELDSLRREVDSLRKALKEGPSQGKVAPTRKSKA
SYQYKVDREKILTIMRETMENPQKSRQCLDALKATWPEILDSISPQNRAL
LNGSEPVLANQENAILAFNAAFNAELVMKRSDLNDMFGNIMSSAAGFSPN
IMAVPKAEFEKLRTEFARSLKSKEELEKEDREEYIPQELEFLSDVVEIED
>stu0896 dprA, DNA processing protein, Smf family
MNNFELFKLKAAGLTNLNILNILDYQKNQDKKLSLRDMAVVSKSKNAVLF
MEKYKNLDVKQLKEDFQRFPTLSIFDKEYPIELKHSYNPPVLLFYQGNID
LLSKPKLAVVGARKCSETGKQSVRKIVHELGNAFTIVSGLARGIDTCAHM
EALKNKGNTIAVIGTGLDVYYPKENKALQDYMAKNHLVLTEYGPGEQPLK
YHYPERNRIISGLCQGVMVVEAKLRSGSLITCERAMEEGRDVFAIPGNIL
DGKSDGCHHLIQEGAKCITTGFDIISEFS
>stu1550 exoA, 3'-exo-deoxyribonuclease
MKLISWNIDSLNAALTGDSARAQLSRAVIDTLVTENADIIAIQETKLSAK
GPTKKHLQILEDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYP
EIGAPSTMDCEGRIITLEFDTFFVTQVYTPNAGDGLKRLLERQIWDKKYA
DYLAELDAQKPVLATGDYNVAHKEIDLANPSSNRRSPGFTDEERAGFTNL
LNKGFIDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWRIDYWLTSNRIAD
KVIKSNMIDSGDRQDHTPIVLEIDL
>stu1279 gyrA, DNA gyrase A subunit
MQDNNLIDVNLTSEMKTSFIDYAMSVIVSRALPDVRDGLKPVQRRILYGM
NELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRYML
VDGHGNFGSMDGDGAAAQRYTEARMSKIALEMLRDLNKNTVDFQDNYDGS
EREPIVLPSRIPNLLVNGATGIAVGMATNIPPHNLAETIDAVKLMMDNPE
VTTRELMEVLPGPDFPTGGLVMGKSGIHRAYETGKGSIVLRSRTEIETTK
SGRERIVVTEFPYMVNKTKVHEHIVRLAQEKRIEGITAVRDESSREGVRF
VIEVRRDASANVILNNLFKLTQLQTNFSFNMLAIEKGVPKILSLRQILAD
YIAHQKEVVVRRTQFDKDKAEARAHILEGLLIALDHLDEVITIIRNSQTD
AEAQAELMARFELTERQSQAILDMRLRRLTGLERDKIQNEYDDLIALITD
LADILAKPERVIAIIKEELDESKRKFADARRTELMVGEVVSLEDEDLIEE
EDVVITLSNKGYIKRLAQDEFRSQKRGGRGVQGTGVNDDDFVRDIVSTST
HDHLYFMTNKGRVYRLKGYEIPEYGRTAKGLPIVNLLKLDEGETIQTVIN
AKSDEASDNNHLVFVTRQGLVKRTKEAEFKNIRQNGLIALKLREGDELIN
VFLTNGNEEIIIGTKFGYSVRFKEDTIRSMSRMAAGVKGVTLRDGDQVVG
AAAITEDQEVLIITEKGYGKRTSATEYPTKGRGGKGIKTANITDKNGNLA
GIVTVSGDEDIMVITDTGVIIRTAVANISQTGRVTQGVKVMRLDDTARIV
TFALVEPEEID
>stu1521 gyrB, DNA gyrase B subunit
MTDELKNLEEKAQEYDASQIQVLEGLEAVRMRPGMYIGSTSKEGLHHLVW
EIVDNSIDEALAGFASHIKVFIEPDNSITVVDDGRGIPVDIQEKTGRPAV
ETVFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVKVYKNGHIH
FQEYKRGVVVDDLRIIGETEEHGTTVHFIPDPEIFQETTEFDFGKLAKRF
QELAFLNKGLRISIIDKREGLEQEKHYHYEGGITSYVKYINENKDVIFDE
PIYTYGEMDGISVEVAMQYTTGYHETVMSFANNIHTHEGGTHEQGFRTAL
TRVINDYARQNKILKEKDDNLTGDDVREGLTAIISVKHPNPQFEGQTKTK
LGNSEVVKITNRLFSEALSRFLLENPAIAKKIVEKGILASKARIAAKRAR
EVTRKKSGLEISNLPGKLADCSSNNPEMNELFIVEGDSAGGSAKSGRNRE
FQAILPIRGKILNVEKASMDKILANEEIRSLFTAMGTGFGSEFDVSKARY
HKLVIMTDADVDGAHIRTLLLTLIYRFMHPVLEAGYVYIAQPPIYGVKVG
SEIKEYIQPGADQEEKLRAALENYSVGRSKPTVQRYKGLGEMDDHQLWET
TMDPENRLLARVSVDDAAEADKIFDMLMGDKVEPRREFIEENAVYSTLDI
>stu0719 holA, DNA polymerase III delta subunit
MIAMETIEKLSREKLPKITVLAGEDLGQYSQAKEKFLKQIGFDSSDLTYS
YFDMSETDYQDAELDLESMPFFADEKVVIFDHFADMTTAKKSYLDEKALK
RLENYLQSPVETTRLVLMASGKLDGKRRLVKLLKRDALVLEANSLKDTEL
RTYFQKQAHQEGLTFDKGVFEELLVKSSFDFSDIQKNLAFLKGYKTEGNI
SSQDITEAIPKSLQDNIFDMTQLLLRGQIQDVRELVHDLRLQGEDEIKLI
AVMLGQFRTYLQVKLLSAQGKSEQQIVSSLSDYLSRKVNPFQVRYAIRDS
RHLSVAFLKTTIKTLVETDYQIKTGTLDKDYLLDLALLKIASNS
>stu1999 holB, DNA polymerase III delta prime subunit
MAEAQELRVQPHDLVAEQSVLGAIFINPEKLITVREFIEADDFYKYSHRV
IFKAMVTLSDRNDAIDATTVRTILDDQDDLQNIGGISYLVDLVNSVPTSA
NAEYYAKIVAEKAMLRRIINRLTEIINQAYEGTTESDEIIANAEKALVDV
SEHSNSSGFRKISEVLDVNFNTLEMRSQQTSDVTGLPTGFRDLDKITTGL
HPDQLIILAARPAVGKTAFVLNIVQNVGTKQNKAVAVFSLEMGAESLVDR
MLAAEGMIDSHALRTGQLTEQDWNNVMIAQGALAEAPIYIDDTPGIKITE
IRARSRKLSQEVEGGLGLIVIDYLQLITGTRPENRQQEVSDISRQLKILA
KELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDD
YYRKESEESENAIEDNTIEVILEKNRAGARGTVKLLFQKEYNKFSSIAQF
EES
>stu1209 hstH, histone-like DNA-binding protein
MANKQDLIAKVAEATELTKKDSAAAVDAVFASIEEFLAAGEKVQLIGFGN
FEVRERAARQGRNPQTGETISIAASKVPAFKAGKALKDAVK
>stu1663 int, integrase/recombinase plasmid associated, putative
MSDVMTLKKSDIYNSDGSVKHTAFIHDKKTGKANTLYLKPVQQDLLQYHD
WLVQENINSEWLFPSASHHNRHITEKQFYKVMARVGDLLSINYHYLGTHT
MRKTGAYRVYTQSNYNIGLVMHLLNHSSEVMTLTYLGLDHASRETMLDQI
DFG
>stu0102 int, integrase/recombinase, phage integrase family
MSIKKTKNGTYQLRLYIPEDVQAKLGLGKLFERKYKTRREAKEVELKLSI
DIKNAKSGKSHINIKNKGEIIFKKFYEDILLEPYKAGQTTTTIKPPTKAT
VFQTENIFRLHILSILGKYSIEYPNNNKQLILSLLTPKANSYANFKVIRS
YVNSVFDWAEELEYIPSNKLRKTITRIKANKKILLKESKREEDLSLDKEE
LKLWLQAFDIDLEKGLIDLKDYTLFYTTFFLSDRKSESYALQWKHINFST
GETLIEQALDRFGNIKPTKGRKKTLFKTPIELIELLANWKARQQEELKLF
GLRQTQKQFVFTYNDRSNNINLPLHVDYLNYRMKSVRRRHPELAPASPHK
LRHAGVTLAKQAGYSLEAISEALTHSDKQITKTYVNTKDIVNRTAGDIAF
RSLKK
>stu1955 int, integrase/recombinase, phage associated
MASVRYRKRGDSNLWTYEIRNEGKTVAHNSGFKTKKLAESEAEPILQELR
LGKRISRDISLADLYQEWIELKILPSSRSEETKKKYLLRKNTIERLFGNK
KVTQIRASEYQRIMNKYGQTVGRNFLGRLNTGIHQSIQMAIADKVLIDDF
TQHVELFSSKEQQMTEEKYLHTEKDYLDLLLAVKRKFDYQRSIVPYIVYF
LLKTGMRFGELVALTWNEVDFDRGLLKTYRRYNTLSHKFVPPKNKTSIRM
VPIDEECIKILRLLQTEQERANMELGIKNRYRMIFQHFGYIHSVPDIASV
NKALSVLLNELDIYPIITTKGARHTYGSYLWHKGFDLGVIAKILGHRDIS
MLVEVYGHTLEEKIFEEFNQIRDIWKDCS
>stu1554 ligA, DNA ligase
MEKRMKELVDKLNQYAKEYYTEDNPSVSDAEYDKLYRELVTLEAEHPELV
QADSPTHRVGGLVLDGFEKYQHEYPLYSLQDAFSREELDAFDKRVKSEFP
NADYMAELKIDGLSISLTYVDGILQVGATRGDGSVGENITENVKRISDIP
LKLDQPLNITVRGECYLPRAEFERINTQRQENGEAEFANPRNAAAGTLRQ
LDTKVVAERRLATFFYQEASPTERLTQNDVLNEVAELGFSVNPRRIVTSS
MDEIWDFIQAVGQDRDHLAYDIDGVVIKVNSLAIQEELGFTVKAPRWAIA
YKFPAEEKEAKLLSVDWQVGRTGVVTPTANLTPVQLAGTTVSRATLHNVD
YITEKDIRIGDTVIVYKAGDIIPAVLRVVESKRTTQEAMPVPSQCPSCGS
GLLHFEDEVALRCINPSCPAQIKEGLIHFASRDAMNISGMGPSVVEKLFK
AELVKEVADIYGLNSQDFLQLEGFKEKSAEKLYAAIQASKENSAEKLLYG
LGIRHVGAKVSKQLLESFGTIKELASADVQAIAAVDGLGEVIAKSIQRYF
AKEEAQVLLKELESYGVNLSYLGQKVADDAILSGKTVVLTGKLEHLKRSE
AKAKLEALGAKVTGSVSKKTDLVVAGSDAGSKLEKAQSLGIEVKDEAWLL
DL
>stu1376 llaBIIM, type II restriction-modification system modification subunit
MNEKIIKSKQRVQKHGEVFTPSWMVQKMIDTPGIKEATEDIYKTFLEPSA
GDGNFLEAILERKLSAVTKNYDKRNWKTKSLFALSSIYGIEFLEDNLEVA
RSRMFLHYLDWYEDSFGVRLSSKTDIYKSAHYLIKKNVVRGNTLTKRHPD
SNELIMFSEWKRVKGHPSLVEEKRFAFAELFGENIDGEERVAEGQLSLFE
EFDEDLNIGKIGQVAIQKVFTLGE
>stu0054 mutL, DNA mismatch repair protein
MPKIIELPEVLANQIAAGEVVERPASVVKELVENAIDAGSTQITIEVEES
GLSKIQITDNGEGMAQADVAMSLRRHATSKIKNQGDLFRIRTLGFRGEAL
PSIASISHLTIVTAADGEVYGTKLVAKGGEIESQDPISTPVGTKITVENL
FYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLLNDGRQLTQTS
GTGDLRQAIAGIYGLTTAKKMVEISNSDLDFEVSGYVSLPELTRANRNYI
TILINGRYIKNFLLNRAIFDGYGSKLMVGRFPIAVIDIQIDPYLADVNVH
PTKQEVRISKEKELMALIKSAIAQSLREQDLIPDALENLAKSSTRGATRS
VQTSLPLKQTNLYYDSSRNDFFVTPETVQEDIKPLVSKSESSVSLVANKQ
QPTVKQAKRSADDSDSEHGKLDYKNKSKLKRMLENLTNEETSTFPELEFF
GQMHGTYLFAQGQGGLYIIDQHAAQERVKYEYYREKIGVVDSSLQQLLVP
YLFEFSGSDYISLQEKMPLLNQVCIYLEPYGNNTFILREHPIWMKEEEIE
SAVYEMCDMLLLTNEVSVKTYRAELAIMMSCKRSIKANHALDDYSARDLL
VQLAQCKNPYNCPHGRPVLVNFTKSDMEKMFRRIQENHTSLRDLGKY
>stu0620 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTI
QAMRRRGKYLIFDFGQLIIISHLRMEGKYLLFTDQVPDNKHFHLFFKLDD
GSTLVYQDVRKFGTFDLLDRKQEEAYFTRKKLGPEPTKKTFKYVPFERAL
MHSGKSIKPLLLEQKLVAGLGNIYVDEVLWAAKVHPETPANKLSKAAMKR
VHDQTIAILQLGIAKGGSTIRTYRNALGEDGTMQNYLQVYGKTGQPCPRC
ASMIVKIKLGGRGTHLCPHCQKR
>stu0050 mutS1, DNA mismatch repair protein
MAKEKISPGMQQYLDIKKNYPDAFLLFRMGDFYELFYDDAVKAAQILEIS
LTSRNKNADNPIPMAGVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQAVG
VVKREVVQVITPGTVVDSSKPDSANNFLVAIDKVGSRFGLSYMDVSTGEF
FATELDDFSSVCSEIQNLKAREVVVGYDLLETDEQVLVNQLNLLLSKETE
GYDDVHLIGNSLTDLESSVASKLLQYVHRTQMRELSHLQKAQHYEIKDYL
QMSYATKSSLDLLENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLV
NQASIIERQNIIQVFLDNFFERSDLTESLKGVYDIERLASRVSFGKANPK
DLIQLGHTLAQVPVIKAILESFNDDALSGLLQELDALPELESLIRSAIDP
DAPATITEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGITTL
KIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERFGTAELAKIEGEM
LEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAVTAE
TNHYVRPVFNDEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDSQTNIQLI
TGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADD
LISGQSTFMVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSII
EFIHDKVGAKTMFATHYHELTALSNSLTHLVNVHVATLEKDGEVTFLHKI
VDGPADKSYGIHVAKIAGLPTDLLNRADTILTQLEGETVVIQPQEKVLSQ
EKPAIETHVNEQISLFDDFTENPVLQELRDLDIYNMTPMQVMMAVADLKQ
KL
>stu1762 mutS2, DNA mismatch repair protein
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEI
QEMSEIFVEHHGFAIGSLRDISEPLRRLELDADLNIQELIAIKKVLQASA
DLSRFYADLENVELIALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPE
LQNIRRQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTY
RNRIAGVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHEL
SDQLRPHTAAIANNAWILGHMDFIRGKYLYLHDKKAIIPEISDNQTLQLL
NVRHPLLINPVANDLRFDEDLTVIVITGPNTGGKTVMLKTLGLAQLMAQS
GLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNTAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYG
IETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKE
AENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLY
NEFSHEYDKELEKAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA
KGKLKKLAAQVDLSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQRGTLTS
QAKNGNWEAQVGLIKMSLKADEFTLVRTQAEAQQPKKKQINVVKKAKKTS
SDGPRARLDLRGKRYEEAMQELDAFIDQALLNNMSQVEIIHGIGTGVIRD
AVTKYLRRHRHVKNFEYAPQSAGGSGCTIATLG
>stu1143 mutT, 7,8-dihydro-8-oxoguanine-triphosphatase
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECA
RREIFEETHLTVKKMDFKGMITFPEFTPGHDWYTYVFKVTDFEGKLISDE
ESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNL
IDKTVTFYDK
>stu1757 mutY, A/G-specific adenine glycosylase
MLDLKEYGIVMWDAEKIASFRRTLLDWYDREKRDLPWRRIKNPYYIWVSE
IMLQQTQVQTVIPYYERFLDWFPTVKDLAEAPEEKLLKAWEGLGYYSRVR
NMQKAAQQIMTDFAGQFPDTYDNIAKLKGIGPYTAGAISSIAFDLPEPAV
DGNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDRPGDFNQALMDL
GSDIESAKNPRPDESPIRFFCAAYLNGTYDKYPIKLPKKKPKPVQIQAFI
IRNMKGEFLLEKNIDGRLLGGFWTFPIIETDFIGQQLSLFKKDNCALETV
SQKAIFEENYALKPVWTDNNFTPVKHTFSHQKWTIEIVEGIVKDDKLPTH
KELCWVTTEDFNQFPMATPQKKMIKTYEDSKKG
>stu1220 nth, endonuclease III, DNA repair
MGWSIMLGRKRVNEALALMGKMFPDAHGELEWETPFQLLVAVILSAQTTD
KAVNKVTPGLWARYPEIEDLASANLDDVEMCLRTIGLYKNKAKNIIKTAR
AILMNFDGQVPKTHKELESLPGVGRKTANVVLAEVYGIPSIAVDTHVSRV
SKRLNIAPENASVEEIEAELMKKIPKKDWIISHHRMIFFGRYHCLAKNPK
CQTCPLQSYCKYYRETTKK
>stu0589 parC, DNA topoisomerase IV (subunit C)
MHRFSIFLQRFSASRIVPLYLMSNIQNMSLEDIMGERFGRYSKYIIQERA
LPDIRDGLKPVQRRILYSMNKDGNTYDKGYRKSAKSVGNIMGNFHPHGDS
SIYDAMVRMSQDWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGY
LLQDIDKNTVPWAWNFDDTEKEPTVLPAAFPNLLVNGATGISAGYATDIP
PHNLAEVIDAVVYMIDHPSAKLDKLMEFLPGPDFPTGAIIQGKDEIRKAY
ETGKGRVVVRSRTEIEQLKGGKKQIIVTEIPYDVNKAVLVKKIDDIRVNN
KVPGIAEVRDESDRSGLRIAIELKKDADSQTILNYLLKYTDLQVNYNFNM
VAIDHFTPRQVGLQKILSSYIAHRRDIIVARSKFDKEKAEKRLHIVEGLI
RVISILDEVISLIRASENKSDAKENLKVSYDFSEEQAEAIVTLQLYRLTN
TDIVALQNEEANLREQIATLAAIIGDERTLFNVMKRELRDIKKKFGNDRR
SELQAETKTIEIDTASLIVEEETYVSITRGGYVKRTSPRSFNASKIEEVG
KRDDDDLILVQQAKTTQHLLIFTNQANVIYRPIHELPDIRWKDLGEHLSQ
TITNFSKDEEVLYAEILDDFETGTYLATTKLGQIKRFERKEFTPWRTYKS
KSVKYGKLKDESDVIVTVTPIQLDDIMIITQKGYALRFNADEVPVVGAKA
VGVKAINLKDDDKVQAVFVANTQSFYLLTQRASLKRVATSDIPRAKRAGR
GLQVLRELKTKPHRVFTAGPVFTENAGAEIDLLATPVEETPQILFVIATT
GETAEVDLSLLNLSERTSNGSFIEGLADKEVFSAKILKK
>stu0588 parE, DNA topoisomerase IV (subunit B)
MAKKEINVNNYNDDAIQVLEGLDAVRKRPGMYIGSTDGTGLHHLVWEIVD
NAVDEALSGFGDVIAVTLNKDGSVSVSDSGRGMPTGMHAMGKPTVEVIFT
VLHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGSVYRQRFE
NGGHPVTGLEKIGKAPKSKTGTKVTFMPDASIFSTTDFKFNTISERLKES
AFLLKNVTMTLTDLRGEEEVREEFHYENGVQDFVSYLNEDKETLTPVIYI
DGDQQDFHLELALQYNDGYSDNILSFVNNVRTKDGGSHETGFKSAITKAF
NDYARKTGLLKEKDKNLEGSDYREGLSAVISLLVPEEHLQFEGQTKDKLG
SPLARPIVDGIVSEYLTYFLMENGDLASNLVRKAIKARDAREAARKARDA
SRNGKKNKKDKGLLSGKLTPAQSKNAKKNELYLVEGDSAGGSAKQGRDRK
FQAILPLRGKVLNTEKAKMADILKNEEINTMIYTIGAGVGADFNLDDINY
DKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVETGHVYIALPPLYKMSKG
KGKKEVVEYAWTDGELEELRQKFGRGALLQRYKGLGEMNADQLWETTMNP
ETRTLIRVTIDDLARAERRVSVLMGDKAAPRRQWIEDNVKFTLEETTAF
>stu0986 pcrA, ATP-dependent DNA helicase
MRMENMMNPLLTGMNDQQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYL
IDEKMINPWNILAITFTNKAAREMRERAVALNPATSETLIATFHSMCVRI
LRREADHIGYNRNFTIVDPGEQRTLMKRILKNLNLDPKKWNERAILGTIS
NAKNDLLDEIAYEHQAGDMYTQIVAKCYKAYQEELRRSEAMDFDDLIMMT
LRLFDKNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKNICVV
GDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANEV
IKNNRNRRPKKLWTQNDEGEQIVYYRANDERDEAVFVASTIDNIVREKVK
NFKDFAILYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYL
NLIANTSDNISFERVVNEPKRGVGPGTLEKLRNFAYEQNMSLLDASANIM
LSPIKGKAAQGVYDFANMILNLRDQLDGLSITDTVEAILDKSGYLDALSM
QQTLESQSRIENIEEFMSVTKNFDETNTDGTEDETGIDRLGRFLNDLALI
ADTDDGEVEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEEPDE
LEEERRLAYVGITRAEEILFLTNANTRTLFGKTSYNRPSRFLREISDDLL
QYQGLARPANSSFGVRFTKEEPIQFGQGMSLQQALQTRKANAQPQKHTGA
QPFSKATGGLPFSKASDSGNSATDWKIGDIAHHKKWGDGTVLEVTGSGKT
QELKIKFPEVGLKKVLASVAPIVKK
>stu1761 polA, DNA-directed DNA polymerase I
MTNQKKLLLIDGSSVAFRAFFALYNQIDRFRNNNGLHTNAIYGFHLMLDN
LLERIQPTHVLVAFDAGKTTFRTEMFADYKAGRAKTPEEFREQLPYIREM
LAARGIAYYDLAQYEADDIIGTLAKMAENTSEAFQITVVSGDKDLIQLTD
ENTVVEISKKGVAEFEAFTPDYLMEKMGITPAQFVDLKALMGDKSDNIPG
VTKIGEKTGLKLLLEHGSLEGIYDHIDEMKKSKMKENLINDKEQAFLSKT
LATIDTQSPIEIGLDDTAFKGPNLEKLLAFYDEMGFVHFKNALRGEAVPQ
DFDVAYVEPSQVTADHFSSEDFFYFEILGDNYHTEPIIGFAWGNEKQIYA
STDTDLLKSEAFQAALSKAVNIYDFKRSKVLLSHLGIDLPTANFDARLAK
YLLSTVEDNELSTIARLYTDLPLETDEVVYGKGAKRAIPEKEVLLSHLAK
KVKVLQVAKPVMLEKLAEHGQSELLFDMELPLANVLAKMEMAGIKVDGQT
LNEMAVENQAVIDKLTQDIYEMAGEEFNINSPKQLGVILFEKMGLPLEYT
KKTKTGYSTAVDVLERLAPIAPIVAKILEYRQITKLQSTYVLGLQDYILE
DGKIHTRYMQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPSTKDAV
LLSSDYSQIELRVLAHISGDEHLIAAFKEGADIHTSTAMRVFGIEKPEDV
TPNDRRNAKAVNFGIVYGISDFGLSNNLGISRKKAKEYIDTYFERYPGIK
AYMDNVVREAKDKGYVSTLFHRRRELPDINSRNFNVRNFAERTAINSPIQ
GSAADILKIAMINLDKALVEGGYKTKMLLQVHDEIILEVPRDELLAMKAL
VKETMEDAVELAVPLIADENEGCTWYEAK
>stu0062 polC, DNA polymerase III alpha subunit
MSDKFKLLLKQIHFPQHEEAYNEIKSGSIESVKLFKSKRQWFFVFSFRNL
LSYETFTLFDNLLHSSFDSLGAKVSYMINVEDISCDQSLLEAYFSYALDI
LKSSHFSIYSLFSNLGIEISNNSISVKAPAHILRENLHERFIALIADVLS
NVGLSNVSISVLEDKEASSSLEEAYETNKISLQEEAESQARQALQSIVQS
SPVPPPQKHQAQNFAEKQSQRVASFDKAEITPMIEVNSEENRIVFEGYIF
DVEQRETKTGRIIINFKVTDYTSSFAMQRWVKDSEELVKFGMIKKGNWVR
VRGRIENNPFTHSLTMNVQDIKEISHTPRKDLMPEGQKRVEFHAHTNMST
MDAIPTVEELIDTAAFWGHPAVAITDHANVQSFPHGYHKAKKAGIKAIFG
LEANLVEDKVPIVYNSENLELKEATYVVFDVETTGLSAVHNDLIQIAASK
MHKGNIVEQFDEFIDPGYPLSAFTTELTGITDNHVKGAKPLVQVLQEFQE
FCKGAVLVAHNATFDVGFMNANYERHQLPTISQPVIDTLEFARNLYPEYK
RHGLGPLTKRFGVALDHHHMANYDAEATGRLLFIFIKDVFEKHGLTNLEQ
LNTELVSDDSYKKSRVKHATLYVQNQTGLKNIFKLVSLSNVSYFEGVARI
PRKVLDEYREGIIVGSACADGEVFDTLLSHGIDKAVEVAKYYDFIEVMPP
AIYAPLIAKDLIKDEEAIEQLIRDLIEVANRLDKPVLATGNVHYINPEDA
IYREIIVRALGQGAMINRPIGKGENAQPAPLPEAHFRTTNEMLDEFAFLG
KDLAYEIVVANTQAMANQIEEVEVVKKDLYTPYIDRAEEQVAEMTYAKAF
ELYGNPLPDIIDLRIEKELSSILGNGFAVIYLASQMLVNRSNERGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYLCPKCQHSEFITDGSYGSGFDLPDK
ECSECGTEYKKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRD
IFGEQYAFRAGTVGTVADRTAYGFVKGYERDYNKFYRDAEVDRLAMGVAG
VKRNTGQHPGGIVVIPNYMDVYDFTPVQYPADDVTAAWQTTHFNFHDIDE
NVLKLDILGHDDPTMIRKLQDLSGIDPKDIRADDPDVMKLFSGTEVLGVT
PEQIGTSTGVLGIPEFGTNFVRGMVEETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLDPKMAFTIMERVRKGMW
LKISEEERNGYIQAMRENNVPDWYIESCGKIKYMFPKAHAAAYVMMALRV
AYFKVHHPIYYYCAYFSIRAKAFELKTMSAGLDAVKARMEDIKEKRQRNE
ATNLENDLFTTLEIVNEMLERGFTFGQLDLYKSQATEFLIEGDTLIPPFI
ALEGLGENVAKQLVAAREEGEFLSKTELRKRGGLSSTLVERLDEMGILGN
MPEDNQLSLFDDFF
>stu1429 priA, primosomal replication factor Y
MVLVAQIIVDVPLMQTDRPYSYLVPESMQGQITIGMRIHVPFGKGNRLLQ
GFVIGFGEQENVRNMPDLKPIAELLDYEPVLNQDQLDLADQMRHTVFSYK
ISILKSMLPGLLNSQYDKVIMATDKLSEEERDIFLQGRDHILFSQLSKEQ
GQAIPRLVGSGRVTVDYIARDKQNIKTEKHYSVQRGILETLDISQRAKKR
LELRDFLLEKNEPGKLVDLHKLFSRDVVKFFIEAGALDITEVEVNRADSY
FEKVEKTDFLELNAQQAHAVEVMTGQIGHGGKPFLLEGVTGSGKTEVYLH
LIERTLAMGKTAIVLVPEISLTPQMTNRFISRFGDLVAIMHSGLSDGEKF
DEWRKVRSGQAKVVVGARSAIFAPLDNIGAIIIDEEHEATYKQESNPRYH
ARDVALLRSKSHGAILVLGSATPSIESRARAQKGVYHFFELTERANPSAK
IPQVEVVDFKDFVGRQEASDFTPPLLEKIRERLARKEQVVLLLNRRGYSS
FVMCRDCGYVDDCPNCDISLTLHMDTKTMNCHYCDFQKAIPNVCPNCQSR
QIRYYGTGTQKAYDQLTELFPEARVIRMDVDTTRKKGAHEKLLETFGSGK
ADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSAERTFQLLTQVA
GRAGRADKEGEVIIQTYNPSHYAIRFAQQQDYEGFYAYEMGIRRQLAYPP
YFYTVGITLSHKDEEFVVRKSYDVMACLREHLSDKVTFLGPTPKPIARTH
NLYHYQIIIKYRFEDSLEETLNRILDMTQEPENKDLRLIIDHEPQNFT
>stu1465 radC, DNA repair protein
MYSIVAEESGLLPRERLLQKGAEVLSDQELLAIVLRTGTRSESVLSMANR
ILKGMTSLADLSRLSLNELQEIPGIGRVKSIELKAMVELAKRIEKAELAR
SEQIMSSQQVARRMMLDIGDKPQEHLVAIYLDTQNRIIQQKTVFIGGVRR
SIAEPREILYYACHLMATSLIVVHNHPSGEAYPSRNDIDFTQKIKRSCDD
LGICLLDHLIVGKSTYYSFREEREDFEL
>stu0060 recA, recombination protein A
MAKKTKKTEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKV
QVMSSGSLALDIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQTQKEG
GIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGA
VDLVVVDSVAALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKT
IAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRGNTQIKGTGDK
KDQNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISQTGELVKIASDIGI
IQKAGAWFSYNGEKIGQGSENAKKYLADHPEIFAEIDHKVRVHYGLVELD
EDDVVEDTQVEDTQVEDTSDELILDLDSTIEIEE
>stu1767 recD, exodeoxyribonuclease V
MQEFYFSGTIERIIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDV
MEGEDYTFWGQLTNHPKYGKQLQMTRYERSKPSASGLIKYFSSDNFKGIG
KKTAERIVEIYGEDPIDKILEDPSKLEQIPNLSKVNREAFLAKLKINYGT
EQILSKLSSYGLTPKAASQIFNQYKEESLNLIEKYPYLLVEEVQGIGFKM
ADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEAKSLLERTIIL
LESSRQIELDPALVAHQLTNLIQEDKVQNIETKIFDNTLYFAEQGIYTHL
TRITKDQPDISAEDKIQASLERVEDELGITYDKVQKDAIIKALQSKVFIL
TGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TKLPSATIHRHLGLNGEDDFKTLDDYLDCDLIIIDEFSMVDTWLANQLFE
SISDTTQVIIVGDQDQLPSVGPGQVLADLLQIDDLPKVSLTKIFRQSEDS
TIVTLASQIRQGQLPTDFTEKKADRSYFEANANHIPQMVPKIVSAAIKSG
IAAQDVQILAPMYRGQAGINNLNTIMQDLLNPKEKANQFAFNDIFFRKND
KILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMSFDGNEVIYPR
NEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAK
SKLVMLGEIAAFDYAVHNEGAKRNTYLIQRFEQTYTQAVDKSVEKNVKNE
GTDAFNQTKTENNRPSETLENKDFSENINPSQTLINTYSHPVDKSVNKPV
QTEENYRLTEENWATIDPMIGLSEDDIAAFFNNN
>stu2015 recF, DNA repair and genetic recombination protein
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTR
SHRTHLDKELIQFQQNSLKLNGIVHRHSGNLPLEINLSNKGRVTKVNYLK
QAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDL
SNYNHVLKQRNAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQL
EEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLTILNQNHKRDI
FKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVT
EEFPILLLDDVMSELDNHRQLKLLESIDEEVQTFMTTTSLDHLSNLPPNL
KTFLVKNGTIYEKQVD
>stu1725 recG, ATP-dependent DNA helicase
MIQLDSPIADLKGFGPKSAEKFTKLDLHTVGDLLLYFPFRYEDFKSKSIF
ELMDGEKAVITGTVVTPANVQYYGFKRNRLSFKIKQGEAVIAINFFNQPY
LVDKFEVGAEVAIFGKWDRKKSAVTGMKVLAHVEDDMQPVYHVAQGVSQA
QLIKAIKVAFDSGALNLLEESLPQVLMDKYRLMGRQEAVRVMHFPKDLAE
YKQALRRIKFEELFYFQMNLQVLKAENKSETNGLAISYDEVKIKAKIATL
PFPLTKAQERSLSEILADMKSGAHMNRLLQGDVGSGKTVIASLAMYGAYT
AGLQSALMVPTEILAEQHYQSLKGLFPELKVVLLTSGMKMADKKVALSKI
ESGEAQMIVGTHSLIQDAVIYHKLGLVITDEQHRFGVNQRRIFREKGDNP
DVLMMTATPIPRTLAITAFGEMDVSIIDQMPAGRKTIITRWVKHEQLDTV
LTWIKSELEKDAQVYFISPLIEESESLDLKNAVALHQELTEFFGDSATVA
LMHGRMKNDEKDQIMQDFKDKKSQILVSTTVIEVGVNVPNATVMVIMDAD
RFGLSQLHQLRGRVGRGDKQSYCVLVANPKNDTGKKRMQAMCETTDGFVL
AEEDLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEARRVASQIVSDP
NWRENPDWQVLEAHLRNQDEFD
>stu1224 recJ, single strand DNA-specific exonuclease
MITSTYDWKINTKEPDAGFFKLAKEHGLVKTAAKIAYERGIRTEEALEDF
LKADLSHLHDPYLLHDMDKAVARIRQAIENYEQILVYGDYDADGMTSASI
VKEALEMMGAEARVYLPNRFTDGYGPNESVYKYFIEQEGISLIITVDNGV
AGNEAIAYAQEQGVDVIVTDHHSMPSQLPEAYAIVHPEHPGADYPFKYLA
GCGVAFKIATALLETIPTEMLDLVAIGTIADMVSLTDENRIMVKVGLEIL
KTTERIGLQELLRISEVDLTTISEETVAFKLAPQLNALGRLDDPNPAIEL
LTGFDDEEAQAIALEINAKNEERKEVVQNIFDEAMSMVDLDKPVQVLAKE
GWHPGVLGIVAGRIMEQISQTVVVLNIEDGLARGSARSLESINIFHALDD
HRDIFTAFGGHAGAAGMTLPEENLTQLSDILCSYVYDNDIDTGAKNTLNL
DEELQLGELSLDTIRSLEKLAPFGMDNKKPVFWLHDITVTQARTMGQNGA
HLKFKVKQGKASFDVVAFNKGHLLQEFQQAQGLELAVTLSVNVWNGQTTL
QLMLADVRVDNVQLFDFRSKNMVLPEGLPTVEEASDEATAVVLDTLPNSE
TELKEWFDGKEFQAIYFKNRIKEAYYLTGYGTREQFARLYKTIYQFPEFD
VRYKLDDLSHYLKIDKILLIKMIQIFDELGFVTIDNGVMTVNKEAGKRDI
EESKIFQDLKRLVKFQELMALGTPQEIYDWLYNQEQ
>stu1213 recN, DNA repair and genetic recombination protein
MLLEITIKNFAIIEEISLNFENGMTVLTGETGAGKSIIIDAMNLMLGARA
SSEVVRHSAPKAEIQGFFSIEQNPALVSLLEDNGIPVEDELIIRREIFQN
GRSVSRINGQMVNLTILKAVGNFLVDIHGQHDQEELMRPALHISMLDAFG
DKDFFQAKKEYQEYFDRYRELRKAVLEKQKNEKEHKARIEMLAFQIAEIE
AASLKTGEDLALMKERDKLLNHKQIADTLTNAYVMLDNEDFSSLSNVRSA
MNDLQSLEEYDSDYKELSNNLSEAYYVLEDVTKQLGDLVDNLDFDAGRLQ
EIEYRLDTINAITRKYGGTVDDVLDYLENSSKEYNLLTGNSSSSDAMEQE
LKQLEKDLLASAETLQRERHQIANALESEIKTELCDLYMDKADFKVVFTK
GKFNRDGNEQVEFYISTNPGEGFKPLVKVASGGELSRLMLAIKSAFARKE
DKTSIVFDEVDTGVSGRVAQAIAQKIHKIGSYGQVLAISHLPQVIAIADY
QFFISKESDNETTVSRVRLLTPEERVEEIAKMLAGDNLTDAALSQARALL
KVDEPV
>stu0027 recO, DNA repair protein
MQKLESRGFILFNRNYRENDKLVKIFTKQAGKRMFFVRGGGSGKLSAVIQ
PLNIAEFMMTVNDEGLSFIEDYSQAESFKEITSDIFKLSYATYLAALTDA
AIADGVVDAQLFAFLEKTLVLMEEGLDYEILTNIFEIQVLDRFGVRLNFH
ECVFCHRVGLPFDFSYKFSGLLCPNHYEEDERRSHLDPNVPYLLDRFQGL
SFEELRSISVKDEMKRKLRQFIDELYDNYVGIHLKSKKFIDNLNSWGHIM
SKEDNAD
>stu0614 recR, recombination protein
MLYPTPIAKLIDSFSKLPGIGAKTATRLAFYTISMSDEDVNDFAKNLLAA
KRELTYCSVCGRLTDDDPCIICTDETRDRTKILVVEDSKDVSAMEKIQEY
RGLYHVLQGLISPMNGVGPDDINLKSLITRLMDSEVDEVIIATNATADGE
ATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
>stu1716 rexA, ATP-dependent exonuclease, subunit A
MLTKAFLSPAEIEERIAQEAASDKDRKLTPEQIEAIYSNGTNILVSASAG
SGKTFVMVERILDMIGRGVGIDQLFISTFTVKAAGELKERLEKRLTKHLG
QAETDEERAFLSDQIAKIGTADIGTMDAFTQKLVNQYGYLLGVSPTFRIM
TDLAEQTLMKNEVYADLFNDYMQGKDAQLFQKLVRNFTGHSKTSKAFRDL
VYDIYSFSQATADPEKWLCQNLLKGQIEAKPEQAKNELLDGLKDGLLADF
LAFLRDHLGIAQREFAKAKYLNNVSDAIILLEGSLINDQTDMEDLLKQLL
TLSGGTGLTNMTRPKDEELKAYKEAYNKTKNEFVAQLREVDTQLTVLEVL
TKHNDDILPMLELLQSFVLDFSDQYLQAKIQENTFEFSDIAHFAIRILEE
NPEVAVSYRDRYHEVMVDEYQDNSHTQERMLELLSNGHNRFMVGDIKQSI
YRFRQADPQIFNDKFQLFLENPDAGKLILLKENFRSQSEVLDATNGVFSH
LMDQEIGDILYDKTHMLVAGSQKQKEPHPENETEVLIYNSDESSTSEDEE
GPDQAISSGEISLVIKEIIKLHEQGVRFEDITLLAPNRNTYLDLMVSFEE
HGIPLVPDEYKSSYLESLEVMIMLDTLRAINNPLNDYALVALLRSPMFNF
NEDDLTRIAVQADKGQFYDKLLAAHTKSGLHPEVVMQGLEAKLTLFTETL
ADWRDYSKCHSIYDLIWKIYNDRFYYDYVGGLPRAEQRQANLYALALRAN
AYEKTGFKGLSRFIGMIDKIIASGNDLEEVTDLVPKNAVSLMTIHKSKGL
EFKYVFVLQMNRKFIGHSKDGLSGKYIINREKGLGIKYLADLKDQINTNL
PKLNVVLETLTFQENRREERRASISEEMRLLYVAMTRAEKKLYLVGKGSK
ETLTQQYGTDVENNRLPVALRDQIATYQDWIMALDTAFMRKDLKFTVRFV
EDEELTPEAIGQVEVKAAVDADDLSNNRQTEEIERALTVLESVEKLNHLY
APAIDLPSVRTPSQLKTFYEPIMDTEGVDIMDKKEGVQPLETASTFELPD
FGQKTKVTGAAVGSATHELMQRLTLSDTVTLQDLTQALSRVSASDQVKAR
VQLEKLLGFFDTELGKLILANRDKLRREAPFAMLAEDPASKEDFVVRGII
DGYLLLEDRIVLFDYKTDHFTHPSELKTRYQGQMSLYAKALSQAYQMEKV
DKYLILLGGKDLEVVEV
>stu1717 rexB, ATP-dependent exonuclease, subunit B
MKLLYTDMSQDLTEILTEQASSYAQKGKRVFYIAPSALSFEKERKVLEYL
PQSASFDITVTRFTQMARYFILNTSNPKTQLDDTGLAMIFYKVLLHMGDD
ELKVYGRLRKDSNFINQLVDLYKELQQANMTVLDLQHLDQVEKQEDLVRI
FSAAQDLLLAGDFDNQSKLSAFFKEITSGHLDEALSNTVLVIDGFTRFSA
EEEALVALLNDKCHQIVVGTYTSQKAYKANFVYGNVYQASVDFLRTLAQT
YKVIPDYVTTDKEGNLSFARISRLLESRHDFSTVDETVTEQDKHALKVWE
VVNQKEEVAQVAKSIRQLLADGKRYKDILVLLGDEESYKLHVGQIFRKFD
IPYYFGKEESMSSHPLVEFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQ
EDLDLFEYYVNFADIKGRHKFLSDFTANSRDKYNLDQINALRSQLIEPLD
KFLNSRKQKGSSLLKKLVVFLEAVQLPSQMFELSTKASEAEKEQNEQVWK
AFTHILEQVETIFGDESLSVDDFLSILRSGMLACDYRTVPATVDVVNVKK
YDLIQPHSAPYVFALGMTQSHFPKVGQNKSLLSDEERSRINEATDEHRRL
DIVTQINSKRGHFVAMSLFNAASEQLVLSQPQIINESQDDMSVYLKELLD
LGIPLVEKGRNRFEAKGDQIGNYRDLLSTVIALNSSHLDLDLDKETQTFW
SVAVRYLRKRLDKDQVLIPKVIDDVTTTKVDDQVMQLVFPEEEPLKLSAT
ALTTFYNNQYLYFLRYVLELEELESIHPDARHHGTYLHRVFERVMGDSSS
ESFDDKLEKAIAQTNQDQPFEILYTEDQESRFSRQILEDIARSTASVLRD
NAAVKVECEEVKFDLLLANSIKITGIIDRVDRLTDGALGVVDYKTGKNVF
DIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQVPQLNLSQIG
LEKLAAQAHKELTYKGLFVASETEHLTGGNYDLQKTVTYDKEDLETLLDY
NIKLFRSAAEVIRSGNFAINPYTEDGKSVQGDQIKSITHFEADRHMGQAR
KLLRLPKKGKKEAYLELMAKTEEENQMQVSENTISFPVIDHAVRVDKKDQ
EDNHVD
>stu1568 rheA, ATP-dependent RNA helicase
MKFTDLNLSEDIQSAVVAAGFEQPSPIQELTIPLALEGKDVIGQAQTGTG
KTAAFGLPTLDKIHTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKV
RSVYGGSSIEKQIKALRSGAHIVVGTPGRLLDLIKRKALKLNNIETLILD
EADEMLNMGFLEDIEAIISRVPEERQTLLFSATMPDAIKRIGVQFMKDPE
HVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPELSIVFGRTKR
RVDELTRGLKLRGFRAEGIHGDLDQNKRLRIIRDFKNGQIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVSPNEMGY
LGIIENLTKKRMKGLKPPTAQEAFQSKKKVALKKIERDFADEAIHANFDK
FKDDAVKLAQEFTPEELALYILSLTVQDPETMPEVEIAREKPLPFKPSGG
GFGGKGGKGGRGNRGRDNNRRGGYRGDRNRDDRDGGRRDFKRKSKNNSRD
FENRGNKRPHRASSEKKNGFVIRNKGDK
>stu1699 rheB, ATP-dependent RNA helicase
MSFKDFNFKDYIQEALDEIKFKEPTPVQQKLIPVVRSGRDLVGESKTGSG
KTHTFLLPIFEKLNPESRDVQVVITAPSRELATQIYQSTKQIAKHSDTEI
RVVNYVGGTDKQRQIEKLKVAQPHIVIGTPGRIYDLFKSGDLAIHKAHTF
VVDEADMTMDMGFLATVDKIAASLPKEVQILVFSATIPQKLQPFLKKYLT
NPVMEQIKTSTVIADTIDNWLVSTKGRNKNGQILEMLKGMQPYLAMIFVN
TKERADDLHSYLVSNGLKVAKIHGGIPPRERKRIMNQVKKLEFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGTAITLYQPSD
DSDIRELEKMGITFEPKVFKDGEFQDTYDRDRRANREKAYQKLDTEMIGL
VKKKKKKIKPGYKKKIQWKVDEKRKRERRAANRAKGRAERKAKKQSF
>stu0894 rnhA, ribonuclease HII
MGSILMATIKEVKEQLAILRDLDDPRWASFEEDSRTGVQAAIRKRRKAIL
AELAEEERLEILLNYEKSLYARGIELIAGVDEVGRGPLAGPVVAAAVILP
KLCKIKGLNDSKKIPKSKHEAIYNQVMKEAVAVGIGIKDNYVIDDVNIYE
ATKLAMIEAIEKLNPQPEHLLIDAMNLDLPIEQTSIIKGDANSLSIAAAS
IVAKVTRDKMMADYEQEFPGYAFAKNAGYGTKEHLSGIDKFGVTPIHRRS
FEPIKSIIKK
>stu1765 rnhB, ribonuclease HIII
MGTIVLKMTAEQISVLQKDLASYATATKNPYAFFSAKVDGTSVIAYTSGK
VTFQGAKPEILASRFGYQAEPKQSPDGQNLALIGSDEVGNGSYFGGLAVV
ASLVTPADHAFLKSLGVDDSKNLNDSKIRQIAPLLEEKIPHKALLLSPRK
YNEVVGDGKAHNAVSVKVALHNQAIFLLLQSGAKPDKIVIDAFISEKNYQ
KYFKNERNHFEFPITLEEKAEGKYLAVAVSSIIARNLFLKNLDKLSQEVG
YTLPSGAGAKSDQVAAKLLQAYGDQALQTTAKYHFANTKKAYQRLK
>stu0056 ruvA, Holliday junction DNA helicase, subunit A
MYDYIKGTLVKITAKHIVIETNGLGYIVTVANPYSFSDQMNQTIQVYLHQ
VIRDDAHLLFGFHTEDEKEVFLKLISVSGIGPTTALAIVAVDDNQGLVAA
IDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFAELPAETTNTTANQTAGNQ
QLDEAMEALLALGYKSTELKKVKAFFEDTNETAEQYIKSALKMLMK
>stu1936 ruvB, Holliday junction DNA helicase, subunit B
MARILDNDLLGDEEYVERTLRPQYFKEYIGQDKVKDQLKIFIEAAKLRDE
ALDHTLLFGPPGLGKTTMAFVIANEMGVNLKQTSGPAIEKAGDLVAILND
LEPGDILFIDEIHRMPMAVEEVLYSAMEDYYIDIMIGAGETSRSVHLDLP
PFTLVGATTRAGMLSNPLRARFGINGHMEYYELPDLTEIVERTSEIFEMT
ITPEAALELARRSRGTPRIANRLLKRVRDYAQIMGDGVIDDKIADQALTM
LDVDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEP
YLIQKGFIMRTRTGRVATAKAYEHMGYDYTRDN
>stu1394 sbcC, ATP-dependent dsDNA exonuclease
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVA
LFATTSGDRNVEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIDRVLQQERA
KQGGGTTMQKATASLVIVDKIGGQEIEKLGDKIKEVSDQIEQILGLNAEQ
FKQIILLPQNDFSRFLKEDSKTKTQILKKIFGTGIFDRFQKSLEERLRQS
NKDMDKRQAQLDSHFASQVWSEEELAVLASTPASEKLARLEEFLSQRQES
LTEQKSILKAAHEDLAQLQKSLQTAQDLAKIFQELEQAKERYRLEIEEGA
QGQAEAKVHLEELQFAQGLQETIRTLKQYRKQLMQLEQDLEIAQEALSEK
QQAFEDVKAKKEELTVQSKDFLQKEEELETWKENIIYAQSLAQEQEKIKR
STTNYKQLEETYQQARKEVEMLNKSLSDLEANRLSLDSLHEAEKLFQIVG
YSVENQLAQDLKEIENLNQELTKTEKRHQTLSFDIDQAQEILKELEEELR
RTLVSRRQLMIVQLQAELEEGHPCMVCGALEHPNFGGAQADEVALKNLMD
QVEKLQAQKEKQVATLSNRQATLSEVASKRQDLLDQVAKVKATLEKHYQE
LEEHVKGRFDFDFSIDYETDRGQALLLKVEQYYQELQKRYDKEETDYIRY
QDELGKAQKKATDLAKTYQEAKAVLDQAQERLEDLQEAHPELESVEVYQE
RISLAHQELNLYNKQVKENSKAYNQLHADIKGIKGQIESITKSKDKVNQD
VKRLSAELEQSLKAEGALANDLEQVELWLIEVNNQAIPMLQAKLTTYATL
KQELQAQIHKGQELLQNQEQPDLDSLAQAVQNCQEIYDRQLAQFSVMEKG
LKDATATYQAAKTLQDSNQEVFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYD
QLTGSERSVKSLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGF
GSLDKEALTKAISVLEQIGENRMVGVISHVDDMKEGIAQQLVIIKSHDGS
SRIKIVDKG
>stu1395 sbcD, ATP-dependent dsDNA exonuclease
MNEEVVMKFLHTSDWHVGRTLNGWSLLEEQEWAFQQIVDLAISEKVDGVI
ISGDLYDRAVPPVDAIKLFNKTLARLVLEEQIPVYAISGNHDGAERLHFG
RDFFQHQGLHLSTRLEEAFEPIELENCQIFLLPFIDPIDARIYYKDDEGK
EIQGIGDALTYILEDMEKAFDPDKAHVLVTHFAVSKKDDSDGQGLRELML
SETSNTVGGLTNVTSDLFKSFDYVALGHIHTRFASPTKRVQYSGSPVAFN
VKEAKRKEEKGVYILELDASGDMSQTFHTLEVKRPIVALQESFETLMSPE
FYKNQPCQKAWFAFDIQLSSRKELEGINVRARLEEIYGTDIVEITFSRLG
DVREENLTVDQHLKDLEMQSPQEIVFDFYQTVTGGDVLSERQTALVESVF
EEIERSRQ
>stu0237 snf, ATP-dependent RNA helicase
MAKLIPGRVRNEGIKLFEKGLIAISQVSETQLDTTVGQHHLIYALDDPEI
MCDCDFFAQKGYCSHLAAVEYYLKNAKEGQRLLAKLEEKQESAQDQERGR
SFGGLFLESLSLNEDDTVRYSLTVEGEESTFGSEIWWSLRLRRLPDERSY
VVRDIPAFLKLIETEGYYQIGKNYYEPLSLIQFDQASQAFLDFLGRMIPD
EAKTNLTFILPNNARHLNLPYGFFEEGLRLMQDLDGFRFEWEGIEYRSFL
VEDLTAEANLFSFDICVEPKMIELTVTEKNSQIFFNNRIIFYQGVFYRLN
RKQQKILLGLRSLPIGSDLNKHVSFNLEEQAILAASLSDFKTMGPVKAPK
AFNIKDFTPRFRFDLKGEREVVLTLAFDFDGYVVDNRYELSHLGFTSNYR
NEQAIFRLMVKHGFTPDFQSSKRLNSNQELYDFFINTLPAFENAGPVSIG
QELRDLRVEQSPQIQVERQGNLLEISFDFSSLDDEDVDHALEALMDRAPY
FVNRSGQLIVFDEGTQRISESLRTLRARYSGEGHLELHQLAAYQLMDSLS
ENDSVRFSEDFQQLAQHLRKPEKFDLPSYHVEVDLRPYQERGVQWLSMLH
HYGFGGILADDMGLGKTLQTIAYLSAHLEDGQRVLILSPSSLIYNWQDEF
KKFAPQLDVAVSYGLKPKRDEIIAEDHQIIITSYASFRQDFDVYKAGQYD
YLILDEAQVMKNTQTKIAQYLRDFSVPHCLALSGTPIENHLLEIWSIFQI
VLPGLLPAKKTFLKLTPMEVARYITPFILRRKKDEVLPDLPDLIEITHQS
ELSDSQKAIYLAQLQQMQQGLISASDQEINRRKVEILSGITRLRQICDTP
ALFMDYAGDSGKLDSLRDLLSQIKESDHRVLIFSQFRGMLDITEELLQEL
GISSYKLTGSTPSDSRQEMTRAFNQGSRDAFLISLKAGGVGLNLTGADTV
ILIDLWWNPAVEMQAISRAHRIGQKQNVEVFRLITRGTIEEKILELQEGK
KNLVTTVLDGNESCASMTVEDIKEILGIAIS
>stu1845 ssbA, single strand binding protein
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFIT
VVVWGRLAETLASYASKGSLISLDGEIRTRKYDKDGQTHYVTEVLCSSFQ
LLESRAQRAVRENNPDNDLADLILEEELPF
>stu1753 ssbB, single strand binding protein
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKGANGERETDFIN
CVIWRQQAENLANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVADNF
QMLESRAAREGHSGGSYNVGGFDNSNSFGGGASTGGSFGESQPAQSTPNF
GRDESPFGNSNPMDISDDDLPF
>stu0885 sthIM, type III restriction-modification system methylation subunit
MAKIEPKIFDELKTALVSFGDKYFVGEELNRSKLADDLRNYDEALLSKLF
EVDFIMQHFVKEVAGQKLFQIEQLEEAVLYNDYWDTSYTKYENRVGLASK
GKFLQDSQDVVLDFPFKDCVLTASMTKENNEEGYDDAFLNEVIEKDEIDR
LFDKKVFVNVKRFGDNQGAQHSTAVDNEIVSFDKEKDNLIIKGNNLLALH
ALKNEFAGKVRQIYIDPPYNTGKDSFNYNDKFNHSSWLVFMKNRLEIAWE
LLSDDGTIWISIDGYESHYLKVLADGIFGAENFLDEVVWQRAYAPINLKK
TFSKSHDYILVYAKNNSGAKELNRLPRKAEMVASYKNPDNDPRGVYKADN
FSVGPAVEKNIYEITTPSGRKVLPPDGYSWRFSKERFEELLADNRVYFGK
DGNSAPSYKRFLSEVKDGVVAQTLWTYQEVGHNQDAKKEIKSLFDGQTAF
GTPKPEKLIQRILTLGSDENDLVLDFFMGSATTQAVAMKMNRRFIGIEQM
DYISTVSVPRLQKVIEGEQGGISKDVNWQGGGSFVYAELFPKNMGYLQDV
IHAKDLEELKSVYERMLSGTDTDEPADISFRADLSKIDWLQGFDENKRLL
VKLLDKNGLYYNYSEIDDKNVRDLISDEDYTFNKNFYEGGD
>stu0057 tag, 3-methyladenine DNA glycosylase I
MVNRCRWVPTDNKLYCDYHDKEWGKPIGDDEKLFELLCLESYQSGLSWLT
VLKKRQAFNRVFHNYDISRVAQFSLSELEEALQNPDVIRHKLKLEATVNN
AKQVLKLQGEFGSLSHYFWHFFDGKPLINNVPTYKDVPSLTDLSKQIAKD
LKKRGFKFLGPTTMYSFLQAAGFVNDHENDCSFK
>stu1801 tatD, deoxyribonuclease, putative
MIKIFDTHTHLNVDNFAGKEQEEVDFAAELGVVKMNIVGFDKATIKKSLV
LSEQYDQLYSTIGWHPTEAGSYTQEIEDMIVSQLGNPNVVALGEIGLDYY
WMEDSKEVQIEVFKRQIALSKEYNLPFVVHTRDAIEDTYEIIKEVGVGPC
GGIMHSYSGSLEMAQKFVELGMMISFSGVVTFKKALDVQEAAQYLPLDKI
LVETDAPYLAPVPKRGRENRTGYTRYVVDKIAELRGLTSEEVARVTYDNA
MRIFGLNE
>stu0849 tnp1191, IS1191, transposase, IS256 family
MQNITRKRFIPMTQFTTELLNFLAQKQDSDEFFRTSLETAMNDLLQAELS
AFLGYEPYDKLGYNSGNSRNGSYARKFETKYGTVQLSIPRDRNGNFSPAL
LPAYGRRYDHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATISNISK
VTQENVATFHERSLEANYSVLFLDGTYLPLRRGTVSKECIHIALGITPEG
QKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIINQ
AYPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRAENLEMAVQAL
ENFIAEWKPKYRKVMESLENTDNLLTFYQFSYQIWHSIYSTNLIESLNKE
IKRQTKKKVLFPNEEALERYLVTLFEDYNFKQNQRIHKGFGQCADTLESL
FD
>stu1036 tnp1191, IS1191, transposase, IS256 family
MNDLLQAELSAFLGYEPYDKLGYNSGNSRNGSYARKFETKYGTVQLSIPR
DRNGNFSPALLPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERMYGHHY
SPATISNISKATQENVATFHERSLEANYSVLFLDGTYLPLRRGTVSKECI
HIALGITPEGQKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDG
FKGLEQIINQAYPLAKQQRCLIHISRNLASKVKRADRAVILEQFKTIYRA
ENLEMAVQALENFIAEWKPKYRKVMESLENTDNLLTFYQFPYQIWHSIYS
TNLIESLNKEIKRQTKKKVLFPNEEALERYLVTLFEDYNFKQNQRIHKGF
GQCADTLESLFD
>stu0326 tnp1191, IS1191, transposase, IS256 family
MQNITRKRFIPMTQFTTELLNFLAQKQDSDEFFRTSLETAMNDLLQAELS
AFLGYEPYDKLGYNSGNSRNGSYARKFETKYGTVQLSIPRDRNGNFSPAL
LPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATISNISK
ATQENVATFHERSLEANYSVLFLDGTYLPLRRGTVSKECIHIALGITPEG
QKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIINQ
AYPLAKQQRCLIHISRNLASKVKRADRTVILEQFKTIYRAENLEMAVQAL
ENFIAEWKPKYRKVMESLENTDNLLTFYQFPYQIWHSIYSTNLIESLNKE
IKRQTKKKVLFPNEEALERYLVTLFEDYNFKQNQRIHKGFGQCADTLESL
FD
>stu0839 tnp1191, IS1191, transposase, IS256 family
MQNITRKRFIPMTQFTKELLNFLAQKQDSDEFFRTSLETAMNDLLQAELS
AFLGYEPYDKLGYNSGNSRNGSYARKFETKYGTVQLSIPRDRNGNFSPAL
LPAYGRRDDHLEEMVIKLYQTGVTTREIRDIIERMYGHHYSPATISNISK
ATQENVAAFHERSLEANYSVLFLDGTYLPLRRGTVSKECIHIALGITPEG
QKAVIGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIINQ
AYPLAKQQRCLIHISRNLASKVKRADRTVILEQFKTIYRAKNLEMAVQAL
ENFIAEWKPKYRKVMESLENTDNLLTFYQFPYQIWHSIYSTNLIESLNKE
IKRQTKKKVLFPNEEALERYLVTLFEDCNFKQNQRIHKGFGQCADTLESL
FD
>stu1945 tnp1191, IS1191, transposase, IS256 family
MQNITRKRFIPMTQFTTELLNFLAQKQDSDEFFRTSLETAMNDLLQAELS
AFLGYEPYDKLGYNSGNSRNGSYARKFETKYGTVQLSIPRDRNGNFSPAL
LPAYGRRDDHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATISNISK
ATQENVATFHERSLEANYSVLFLDGTYLPLRRGTVSKECIHIALGITPEG
QKAVLGYEIAPNENNASWSTLLDKLQNQGIQQVSLVVTDGFKGLEQIINQ
AYPLAKQQRCLIHISRNLARKVKRADRAVILEQFKTIYRAENLEMAVQIL
ENFIAEWKPKYRKVMESLENTDNLLTFHQFPYQIWHSIYSTNLIESLNKE
IKRQTKKKVLFPNEEALEHFLVTLFEDYNFKQNQRIHKGFSQCADTLESL
FD
>stu1086 tnp1193, IS1193, transposase, ISL3 family
MRLIKNNTELIGIKDQNIKISLVFETDTHIKIQVKLDYPAPSCPHCHGKM
IKYDFQKPSKIPLLEQAGTPTLLRLKKRRFQCKSCRSVTVAETSIVEKNC
QISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDKL
PAVMSWDEFGFKKGELAFVAQKYETNELVIILDNRRQTTIRNYFLKYPLK
VRQQVQFITMDMSGAYIPLARRLFPNAKIVLDRFHIIQHLGRAFLKTRIA
IMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVA
KTLVFSKELTDYYTLYQLLLFHFQEKRVDEFFELIEENRSKVNHYFQTVF
RTFLRHKQYIKNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRV
FITLNIHKKRTYPVLYRC
>stu1045 tnp1193, IS1193, transposase, ISL3 family
MRLIKNTTELIGIKDPNIIISLVFEKDTYIEVQATLDYPAPPCPHCQGKL
IKYDFQKPSKISLLEQAGTPTLLRLKKRRFQCKSCRRVTVAKTSIVEKNC
QISNLVRQKVAQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKEHYDKL
PAVMSWDEFGFKKGELAFVAQNYETNKLITILDNRRQTTIRNHFLKYPLK
VRQKVQFITMDMSGAYIPLAHRLFPNAEIIIDRFHIIQHLGRAFLKTRIA
IMNQFDKKSLPYRALKNHWRLFQKDSRKLSCKSFHSKTFAQTLSPHEVVR
KTLDFSEELANYYNLYQLLLFHFQEKRVDEFFELIEENVSKVNHYFKTVF
RTFLKHKPYIKNALETHYSNAKLEGTNKLIKDIKRLGFGFRNFINFRKRV
FITLNIQKEKTYQVLSRC
>stu1124 tnp1193, IS1193, transposase, ISL3 family
MRLIKNTTELIGIKDPNIIISLVFEKDTYIEVQATLDYPAPPCPHCQGKL
IKYDFQKPSKISLLEQAGTPTLLRLKKRRFQCKSCRRVTVAKTSIVEKNC
QISNLVRQKVAQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKEHYDKL
PAVMSWDEFGFKKGELAFVAQNYETNKLITILDNRRQTTIRNHFLKYPLK
VRQKVQFITMDMSGAYIPLAHRLFPNAEIIIDRFHIIQHLGRAFLKTRIA
IMNQFDKKSLPYRALKNHWRLFQKDSRKLSCKSFHSKTFAQTLSPHEVVR
KTLDFSEELANYYNLYQLLLFHFQEKRVDEFFELIEENVSKVNHYFKTVF
RTFLKHKPYIKNALETHYSNAKLEGTNKLIKDIKRLGFGFRNFINFRKRV
FITLNIQKEKTYQVLSRC
>stu1444 tnp1193, IS1193, transposase, ISL3 family
MRLIKNTTELIGIKDQNIIISLVFETDTHIEIQAKLDYPLPSCPHCQGKM
IKYDFQKKSKIPLLEQAGTPTLLHLKKRRFQCKNCRRVTVAETSIVEKNC
QISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDKL
PAVMSWDEFGFKKGELAFVAQKYETNELITILDNRRQTTIRNYFLKYPLK
VRQQVQFITMDMSGAYIPLARKLFPNAKIVLDRFHIIQHLGRAFLKTRIA
IMNQFDKKSLPYRALKNHWRLFQKDSRKLSLNSFYSKTFRQTLAPHEVVA
KTLVFSKELTDYYTLYQLLLFHFQEKRVGEFFDLIEENRSKVNHYFQTVF
RTFLRHKQYIQNALETDYSNAKLEATNKLIKDIKRLGFGFRNFINFKKRV
FITLNIHKKRTYPVLSRC
>stu0396 tnp1216, IS1216, transposase, IS6 family
MNHFKGKQFQKDVIIVAVGYYLRYNLSYRDVQEILYNRGINVSHTTVYRW
VQEYGKLLYNIWKRKNKQSIYSWKMDETYIKIKGKWHYLYRSIDADGLTL
DIWLRKKRDTQAAYAFLKRLVKQFDEPRVLVTDKAPSIASVFKKLQAHGF
YQRTEHRTVKYLNNLIEQDHRPIKRRNKFYRSLRTASTTIKGMEAIRGLY
KKNRKEGTLFGFSVCTEMKILLGIPA
>stu2017 tnp1239, IS1239, transposase, IS30 family
MSNEIQFKAKENTSVLYLLFTTNTRKGTEMQNHYTPKGKHLTMDNRRLIE
RWKNENMSNRKIAGLLGKAPQTINNEVKRGTTLQQVRKGLYKKVYSADYA
QTVYQTNRKRSVKKIILTKEMKEKILHYAKQKFSPEMMVKKKKMKVGIST
IYYWFHNGHLGLTKADMLYPRKGKSVKKQASPNFKPAGKSIEDRPEVINL
RLENGHYEIDTVLLTRVKNHCLLVLTDRRSRHQIIRLLPNKTTESVNQAL
EGILREHHILSITADNGTEFSRLAEVFPEERIYYAHPYSSWERGTNENHN
RLIRRWLPKGTKKTTLKEVAFIENWINNYPKKCLDYKSPSEFLMGG
>stu1985 tnp1239, IS1239, transposase, IS30 family
MSNEIQFKAKENTSVLYLLFTTNTRKGTEMQNHYTPKGKHLTMDNRRLIE
RWKNENMSNRKIAGLLGKAPQTINNEVKRGTTLQQVRKGLYKKVYSADYA
QTVYQTNRKRSVKKIILTKEMKEKILHYAKQKFSPEMMVKKKKMKVGIST
IYYWFHNGHLGLTKADMLYPRKGKSVKKQASPNFKPAGKSIEDRPEVINL
RLENGHYEIDTVLLTRVKNHCLLVLTDRRSRHQIIRLLPNKTTESVNQAL
EGILREHHILSITADNGTEFSRLAEVFPEERIYYAHPYSSWERGTNENHN
RLIRRWLPKGTKKTTLKEVAFIENWINNYPKKCLDYKSPSEFLMGG
>stu0046 tnp1239, IS1239, transposase, IS30 family
MSNEIQFKAKENTSVLYLLFTTNTRKGTEMQNHYTPKGKHLTMDNRRLIE
RWKNENMSNRKIAGLLGKAPQTINNEVKRGTTLQQVRKGLYKKVYSADYA
QTVYQTNRKRSVKKIILTKEMKEKILHYAKQKFSPEMMVKKKKMKVGIST
IYYWFHNGHLGLTKADMLYPRKGKSVKKQASPNFKPAGKSIEDRPEVINL
RLENGHYEIDTVLLTRVKNHCLLVLTDRRSRHQIIRLLPNKTTESVNQAL
EGILREHHILSITADNGTEFSRLAEVFPEERIYYAHPYSSWERGTNENHN
RLIRRWLPKGTKKTTLKEVAFIENWINNYPKKCLDYKSPSEFLMGG
>stu0971 tnp1239, IS1239, transposase, IS30 family
MSNEIQFKAKENTSVLYLLFTTNTRKGTEMQNHYTPKGKHLTMDNRRLIE
RWKNENMSNRKIAGLLGKAPQTINNEVKRGTTLQQVRKGLYKKVYSADYA
QTVYQTNRKRSVKKIILTKEMKEKILHYAKQKFSPEMMVKKKKMKVGIST
IYYWFHNGHLGLTKADMLYPRKGKSVKKQASPNFKPAGKSIEDRPEVINL
RLENGHYEIDTVLLTRVKNHCLLVLTDRRSRHQIIRLLPNKTTESVNQAL
EGILREHHILSITADNGTEFSRLAEVFPEERIYYAHPYSSWERGTNENHN
RLIRRWLPKGTKKTTLKEVAFIENWINNYPKKCLDYKSPSEFLMGG
>stu0223 tnp1239, IS1239, transposase, IS30 family
MSNEIQFKAKENTSVLYLLFTTNTRKGTEMQNHYTPKGKHLTMDNRRLIE
RWKNENMSNRKIAGLLGKAPQTINNEVKRGTTLQQVRKGLYKKVYSADYA
QTVYQTNRKRSVKKIILTKEMKEKILHYAKQKFSPEMMVKKKKMKVGIST
IYYWFHNGHLGLTKADMLYPRKGKSVKKQASPNFKPAGKSIEDRPEVINL
RLENGHYEIDTVLLTRVKNHCLLVLTDRRSRHQIIRLLPNKTTESVNQAL
EGILREHHILSITADNGTEFSRLAEVFPEERIYYAHPYSSWERGTNENHN
RLIRRWLPKGTKKTTLKEVAFIENWINNYPKKCLDYKSPSEFLMGG
>stu1792 tnp1239, IS1239, transposase, IS30 family
MSNEIQFKAKENTSVLYLLFTTNTRKGTEMQNHYTPKGKHLTMDNRRLIE
RWKNENMSNRKIAGLLGKAPQTINNEVKRGTTLQQVRKGLYKKVYSADYA
QTVYQTNRKRSVKKIILTKEMKEKILHYAKQKFSPEMMVKKKKMKVGIST
IYYWFHNGHLGLTKADMLYPRKGKSVKKQASPNFKPAGKSIEDRPEVINL
RLENGHYEIDTVLLTRVKNHCLLVLTDRRSRHQIIRLLPNKTTESVNQAL
EGILREHHILSITADNGTEFSRLAEVFPEERIYYAHPYSSWERGTNENHN
RLIRRWLPKGTKKTTLKEVAFIENWINNYPKKCLDYKSPSEFLMGG
>stu0266 tnp1239, IS1239, transposase, IS30 family
MSNEIQFKAKENTSVLYLLFTTNTRKGTEMQNHYTPKGKHLTMDNRRLIE
RWKNENMSNRKIAGLLGKAPQTINNEVKRGTTLQQVRKGLYKKVYSADYA
QTVYQTNRKRSVKKIILTKEMKEKILHYAKQKFSPEMMVKKKKMKVGIST
IYYWFHNGHLGLTKADMLYPRKGKSVKKQASPNFKPAGKSIEDRPEVINL
RLENGHYEIDTVLLTRVKNHCLLVLTDRRSRHQIIRLLPNKTTESVNQAL
EGILREHHILSITADNGTEFSRLAEVFPEERIYYAHPYSSWERGTNENHN
RLIRRWLPKGTKKTTLKEVAFIENWINNYPKKCLDYKSPSEFLMGG
>stu1807 tnp657, IS657, transposase, IS200 family
MIRQNNSLAHTTWNCKYHIVFAPKYRRQIIYGKYKASIGQIFRLLCERKG
IEIHEAEDCPDHIYMLVSIPLKLSISSFMGYLKGKSSLMIFDRHANLKYK
YGNRKFWCRGLYVDTVGRKQKRIEAYIRNQLQEDVMADQLSLFEEYDPFT
GEKNKRK
>stu1677 tnpSth1, ISSth1, transposase (orf1), IS3 family
MDSEKIKIFTRNYKGSLIMSKRSPKSVSEKLEIVLLHLEEGKSLSWLTRN
QGISKDTLSNWVRKYKEAGVDGLEESRQWKKYSKELKEQAVSDYLNGLGS
LKDLTKKYGISDPYVLRSWIKSYTSGKELKATSKGMRRMKQGRKTTFEER
IEIVNFTLAHEKDYQGAVEKYGVSYQQIYSWVRKFEKDGSNGLLDRRGKG
LTSKPNLTPEEELRLKIKQQEERIKYLEMENGLLKKLEEIKRRNRR
>stu1835 tnpSth1, ISSth1, transposase (orf1), IS3 family
MDSEKIKIFTRNYKGSLIMSKRSPKSVSEKLEIVLLRLEEGKSLSWLTRN
QGISKDTLSNWVRKYKEAGVDGLEESRQWKKYSKELKEQAVSDYLNGLGS
LKDLTKKYGISDPYVLRSWIKSYTSGKELKATSKGMRRMKQGRKTTFEER
IEIVNFTLAHEKDYQGAVEKYGVSYQQIYSWVRKFEKDGSNGLLDRRGKG
LTSKPNLTPEEELRLKIKQQEERIKYLEMENGLLKKLEEIKRRNRR
>stu0796 tnpSth1, ISSth1, transposase (orf2), IS3 family
METFQAIKEYADEYEEVSISHLCHILKVSRSGYYKWLQHQETTSEQENLG
LMDIIKKLHSQHNGILGYRRMTLFVNRKLETNYNKKRIRRLMHILGLRSI
IRRAKGYCTKTSFVNVEDNILNRNFTATAPNQKWCTDVTFLKYGFSCKAY
LSAIKDLYDGSIVAYVVGQFNDNELVLETLRKAQKANPNATPLIHSDRGS
QYTSKDYYRLTTQYQMTRSMSRVGKCIDNAPIESFFGHFKTECYDLKKYK
TFEELVSDIDAYIYFYNHQRFQERNNGLAPLEMRNKAVA
>stu1834 tnpSth1, ISSth1, transposase (orf2), IS3 family
METFQAIKEYADEYEEVSISHLCHILKVSRSGYYKWLQHQETTSEQENLG
LMDIIKKLHSQHNGILGDRRMTLFVNRKLETNYNKKRIRRLMHILGLRSI
IRRAKGYCTKTSFVNVEDNILNRNFTATAPNQKWCTDVTFLKYGFSCKAY
LSAIKDLYDGSIVAYVVGQFNDNELVLETLRKAQKANPNATPLIHSDRGS
QYTSKDYYRLTTQYQMTRSMSRVGKCIDNAPIESFFGHFKTECYDLKKYK
TFEELVSDIDAYIYFYNHQRFQERNNGLAPLEMRNKAVA
>stu1356 tnpSth1, ISSth1, transposase (orf1), IS3 family
MDSEKIKIFTRNYKGSLIMSKRSPKSVSEKLEIVLLRLEEGKSLSWLTRN
QGISKDTLSNWVRKYKEAGVDGLEESRQWKKYSKELKEQAVSDYLNGLGS
LKDLTKKYGISDPYVLRSWIKSYTSGKELKATSKGMRRMKQGRKTTFEER
IEIVNFTLAHEKDYQGAVEKYGVSYQQIYSWVRKFEKDGSNGLLDRRGKG
LTSKPNLTPEEELRLKIKQQEERIKYLEMENGLLKKLEEIKRRNRR
>stu0898 tnpSth1, ISSth1, transposase (orf2), IS3 family
METFQAIKEYADEYEEVSISHLCHILKVSRSGYYKWLQHQETTSEQENLG
LMDIIKKLHSQHNGILGYRRMTLFVNRKLETNYNKKRIRRLMHILGLRSI
IRRAKGYCTKTSFVNVEDNILNRNFTATAPNQKWCTDVTFLKYGFSCKAY
LSAIKDLYDGSIVAYVVGQFNDNELVLETLRKAQKANPNATPLIHSDRGS
QYTSKDYYRLTTQYQMTRSMSRVGKCIDNAPIESFFGHFKTECYDLKKYK
TFEELVSDIDAYIYFYNHQRFQERNNGLAPLEMRNKAVA
>stu0797 tnpSth1, ISSth1, transposase (orf1), IS3 family
MDSEKIKIFTRNYKGSLIMSKRSPKSVSEKLEIVLLHLEEGKSLSWLTRN
QGISKDTLSNWVRKYKEAGVDGLEESRQWKKYSKELKEQAVSDYLNGLGS
LKDLTKKYGISDPYVLRSWIKSYTSGKELKATSKGMRRMKQGRKTTFEER
IEIVNFTLAHEKDYQGAVEKYGVSYQQIYSWVRKFEKDGSNGLLDRRGKG
LTSKPNLTPEEELRLKIKQQEERIKYLEMENGLLKKLEEIKRRNRR
>stu0899 tnpSth1, ISSth1, transposase (orf1), IS3 family
MDSEKIKIFTRNYKGSLIMSKRSPKSVSEKLEIVLLHLEEGKSLSWLTRN
QGISKDTLSNWVRKYKEAGVDGLEESRQWKKYSKELKEQAVSDYLNGLGS
LKDLTKKYGISDPYVLRSWIKSYTSGKELKATSKGMRRMKQGRKTTFEER
IEIVNFTLAHEKDYQGAVEKYGVSYQQIYSWVRKFEKDGSNGLLDRRGKG
LTSKPNLTPEEELRLKIKQQEERIKYLEMENGLLKKLEEIKRRNRR
>stu1678 tnpSth1, ISSth1, transposase (orf2), IS3 family
METFQAIKEYADEYEEVSISHLCHILKVSRSGYYKWLQHQETTSEQENLG
LMDIIKKLHSQHNGILGYRRMTLFVNRKLETNYNKKRIRRLMHILGLRSI
IRRAKGYCTKTSFVNVEDNILNRNFTATAPNQKWCTDVTFLKYGFSCKAY
LSAIKDLYDGSIVAYVVGQFNDNELVLETLRKAQKANPNATPLIHSDRGS
QYTSKDYYRLTTQYQMTRSMSRVGKCIDNAPIESFFGHFKTECYDLKKYK
TFEELVSDIDAYIYFYNHQRFQERNNGLAPLEMRNKAVA
>stu1355 tnpSth1, ISSth1, transposase (orf2), IS3 family
METFQAIKEYADEYEEVSISHLCHILKVSRSGYYKWLQHQETTSEQENLG
LMDIIKKLHSQHNGILGYRRMTLFVNRKLETNYNKKRIRRLMHILGLRSI
IRRAKGYCTKTSFVNVEDNILNRNFTATAPNQKWCTDVTFLKYGFSCKAY
LSAIKDLYDGSIVAYVVGQFNDNELVLETLRKAQKANPNATPLIHSDRGS
QYTSKDYYRLTTQYQMTRSMSRVGKCIDNAPIESFFGHFKTECYDLKKYK
TFEELVSDIDAYIYFYNHQRFQERNNGLAPLEMRNKAVA
>stu0897 topA, DNA topoisomerase I
MATATTTKTKTKATKKTRAKKATKKRATPKKNLVIVESPAKAKTIEKYLG
RNYKVVASVGHIRDLKKSSMSIDFENNYEPQYINIRGKGPLIKELKKEAK
KAKKVFLASDPDREGEAISWHLSHILGLEPEDKNRVVFNEITKDAVKNAF
AEPRAIDMDLVDAQQARRVLDRIVGYSISPLLWKKVKKGLSAGRVQSVAL
KLIIDRENEIKAFKPEEYWTIDGAFKKGAKKFQASFYGLDGKKLKLNNND
DVKDVLSRIISDDFNVDKVEKKERRRNAPLPYTTSSLQQDAANKINFRTR
KTMMVAQQLYEGINLGSGAQGLITYMRTDSTRISPVAQNQAAEFITERYG
SKYSKHGSKVKNSSAAQDAHEAIRPSNVFQTPESIAKYLDKDQLKLYTLI
WNRFVASQMTAAVFDTMKVTLSQNGVIFTANGSQIKFDGYMAVYNDSDKN
KMLPEMAEGDTIKKVVTTPEQHFTQTPARYSEATLIKTLEENGVGRPSTY
APTLDVIQRRYYVKLVAKRFEPTELGEIVNSLIVEFFPDIVDVKFTAEME
AKLDKVEIGKEQWQKVIDEFFKPFQKELEKAEEGIEKIQIKDEPAGFDCD
LCGHPMVIKLGRYGKFYACSNFPDCHNTKAITKEIGVTCPTCGQGQVIER
KTKRNRVFYGCDRYPDCEFTSWDIPIGRNCPKSGDYLVEKKVRGGGKQVI
CSNEECDYKESVIK
>stu0006 trcF, transcription repair coupling factor
MANTILELFGKNHQLLEWRDKVSLLSRQLVMGFSGSSKAVAMASALSNQV
PKIFIVTSTQNEAEQLVGDLSAILGEDKVYSFFADDVSAAEFIFASPEKT
HSRLESLNFLMDEEASGVLVTSLVGTKLHLPNPRVYKDSRIDLVLGKEYD
LDALSRHLTHIGYQRVEQVLSPGEFSRRGDILDIYELTAELPYRLEFFGD
EIDGIRQFDSDSQKSLNNLDHVVISPADDIILTREDYQRAEKALESAVSR
ADGLHKAYLEEVLSVTSDGHRHKDLRKFLSLFYDKAYTLFDYLPKGTPVF
IDDFQKIVDRHGRLELEVANLLTEDLHQGKSLSHLNYFVDSFKTLRNYQP
ASFFSNFHNGLGNLKFDKLYQFTQYPMQEFFNQFPLLIDEIRRYTKNKAT
VILQVGSDKQLNSLKETLEEYNLDLPLSSFGDLIPHKAQLVLGNLSNGFY
FADEKVVLVTEREIFHKKVKRRTRANHISNAERLKDYNELEKGDYVVHQT
HGIGQFKGIETIEIRGVHRDYLTIQYQDAATISLPIEQIESLSKYVSVDG
KEPKINKLNDGRFQKTKQKVSKQVEDIADNLLKLYAERSQLKGFAFSPDD
DNQRDFEDEFSYAETVDQLRSIKEIKADMESDKPMDRLLVGDVGFGKTEV
AMRAAFKAVNDGKQVAILVPTTVLAHQHYMNFKERFENHAVEVDELSRFR
SKKEQNETIKNLAKGRIDIIIGTHRLLSKDVKFSDLGLLVIDEEQRFGVK
HKEKLKELKAKVDVLTLTATPIPRTLHMSMLGIRDLSIIETAPTNRYPVQ
TYVMETNPGLIREAILREMDRGGQIFYIYNRVETIDQKVSELHELVPEAR
IGFVHGQMSEVMLENTLLYFLNGDYDILVATTIIETGIDIPNVNTLLIEN
ADHMGLSTLYQLRGRVGRSNRIAYAYLMYHPDKVLTEVSEKRLDAIKGFT
ELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEEAINKRQ
GKTQVRQKGNAEFNLQIDAYLPSDYISDERQKIEIYKRIREIENQKDYQD
LQDELIDRFGEYPDQVAYLIEIGLVKAYLDAAFAELVERKNDTIIVRFEK
VSLKFFLTQDYFEAISKTNLKARISDNQGKVEIIFDVRNKKDYEILEELK
IFGQTFMEIKKRKEKKET
>stu1385 umuC1, SOS responce UmuC protein
MGYFDYSREPRSDIAFIDMKSFYASVECVERGLHPLKTSLCVMSRADNSA
GLIIASSPIFKKVFGKSNVGRAYDLPFDVQTRKFSYYNAKKQGLRTDPEY
VRFIEDWAKVTFIVPPRMDKYISVNMEIQGIFQNYGSPNDIYPYSIDEGF
IDLSSSLNYFVPDKQLSRKQKLDLISAKIQRDIWRQTGIYSTVGMSNANP
LLAKLALDNEAKKTPTMRANWSYEDVEQKVWSIPNMTDFWGIGKRMEKRF
NTLGIHSIKDLANANPDILKKELGVAGLRLWFHANGIDESNVHKPYKPKS
KGLGNSQVLPRDYFRQRDIEIILREMAEQVAIRLRKIGKKATVVSIHLGY
SKHENKRSINTQMKIEPTNNTDLLTNYVLKLFHNKYTSGAIRSVAVNYSG
FVDESFGLISLFDDVEQIEKEERLQTAIDSIRDQFGFTSLLKANALDSAS
RSIARSRLIGGHSAGGLDGLK
>stu1055 ung, uracil DNA glycosylase
MYNSLKEVFMEHSTWHRLLKEELPNHYFSKINQFMDKVYEEETIYPPRDK
VFNALLETPFEEVRVVILGQDPYHGPNQAQGLSFSVPETIPAPPSLVNIL
KELGEDLGPRSHHDLTTWAEQGVLLLNACLTVPAGRANGHAGQIWEPFTD
AVIKVLNQKDTPVVFILWGGYARKKKSLVTNPKHAIIESAHPSPLSAYRG
FFGSKPFSKANAYLVSQGQPPIDWLK
>stu1748 uvrA, excinuclease ABC subunit A
MQDKLVIRGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEG
QRRYVESLSAYARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVG
TVTEINDYLRLLYARVGVPYCINGHGAIKSSSVEQIVDEVLALPERTRMQ
ILAPIVRRRKGQHKAIFERVQKDGYVRVRVDGEIYDVTEVPELSKSKMHN
IEVVVDRLVNKEGIRSRLFDSVEAALRLADGYLIVDTMDDNELLYSEHYS
CPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGNKLEVDIDLVIPDPSKTL
REGALAPWNPISSNYYPAMLEQAMEQFGVDMDTPFENLKKEEQDLILYGS
GDREFHFHYVNDFGRVRDIDIPFEGVVTNINRRYHETNSDFTRNVMRGYM
NELSCPTCHGYRLNEAALSVRVGGEDGLNIGQISELSISDHLQEIDRLEL
GENEELIARPIIKEIKDRLTFLNNVGLNYLTLSRMAGTLSGGESQRIRLA
TQIGSNLSGVLYVLDEPSIGLHQRDNDRLISSLKKMRDLGNTLIVVEHDE
DTMREADWLIDVGPGAGAFGGQIIASGTPEAVARNKKSITGQYLSGAKSI
PVPTERRVGNGCFIEVKGASENNLKNVSVKFPLGKLIAVTGVSGSGKSTL
VNSILKKKIAQELNRNSEKPGKHKSVTGIENIERLIDIDQSPIGRTPRSN
PATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIK
IEMHFLPDVYVPCEVCHGTRYNSETLEVRYKGKNIAEILDMTVDDAVDFF
AAIPKIARKVQTIKDVGLGYVTLGQSATTLSGGEAQRMKLASELHKRSTG
KSFYILDEPTTGLHTDDIARLLKVLQRFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGTIVATGTPEEVVAVSKSYTGQYLKEKLK
>stu1497 uvrB, excinuclease ABC subunit B
MKGKTMIDRKEDNQFHLVSKYEPSGDQPQAIETLVDNIKGGEKAQILKGA
TGTGKTYTMSQVIQRVNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFV
SYYDYYQPEAYVPSSDTYIEKDSSINDEIDKLRHSATSALLERNDVIVVA
SVSCIYGLGSPKEYADSAVSLRPGQEISRDKLLNDLVDIQFERNDIDFQR
GKFRVRGDVVEIFPASRDENAFRVEFFGDEIDRICEIESLTGRNLGEVEH
LVLFPATHFMTNEEHMEEAIKNIMEEMEVQVNQFEAEGKLIEAQRIRQRT
EYDVEMLREMGYTNGIENYSRHMDGRKEGEPPFTLLDFFPEDFLIMIDES
HMTMGQIKGMYNGDQARKKMLVDYGFRLPSALDNRPLRREEFESHVHQIV
YVSATPGDYEMEQTETVVEQIIRPTGLLDPEVEVRPTMGQMDDLLGEINA
RTEKGERVFVTTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRD
LRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGR
AARNSDGHVIMYADKITESMQKAMDETARRREIQMAYNKEHGITPQTIKK
EIRDLISITKTNEAEVAEDTVNYSAMNKKERQEAIKKLQKQMHEAAELLD
FELAAQIRDMVLELKSMD
>stu1306 uvrC, excinuclease ABC subunit C
MNDLIKHKLELLPNNPGCYLHKDKFGNIIYVGKAKNLKNRVRSYFRGSHD
TKTELLVSEIADFEFIVTESNIEALLLEINLIQENMPKFNIRLKDGKSYP
FIKITKELYPRLLITRQVKKDGGLYFGPYPDAGAANEIKKLLDRIFPFKK
CKNPANKVCFYYHIGQCKAHTICHTTEAYWQGLVEDVKNFLNGHDDKIVN
QLKAKMKDMSDQMEFERAAEYRDLIEAVSTLRTKQRVIRQDMQDRDIFGY
YVDKGWMCVQVFFVRQGKLIQRDVNMFPYYNDAEEDFLTYIGQFYLDSRH
LKPKEIFIPGDIDQESVEALVGNEVKVFKPQRGEKKQLVNLAMKNARVSL
TQKFDLLEKDIAKTQGAIENLGKLMGIPTPVRIESFDNSNIMGTSPVSAM
VVFENGKPNKKEYRKYKIKTVEGPDDYASMREVIRRRYSRVKRDGLTPPD
LIIMDGGQGQVNVAKDVLRNELNLSIPVAGLQKNDKHQTNELLFGDPLRV
IDLPRQSEEFFLLHRIQDEVHRFAITFHRQVRSKNSFSSKLDGVEGLGPK
RKQKLLKNFKSMTAIQQASVEDIQALGIPEKVAQALLDKLSQDSH
>stu1008 xer1, integrase/recombinase, tyrosine family
MKRELLLEKIEEYKSLMPWFVLEYYQSKLSVPYSFTTLYEYLKEYKRFFN
WLIDSGISDADDIASIHIKTLENLTKKDMESFVLYLRERPSLNTYSKKQG
VSQTTINRTLSALSCLYKYLTEEVEGPDGEPYFYRNVMKKISTKKKKETL
AARAENIKQKLFLGDETMKFLDYVENEYEVKLSNRAKSSFYKNKERDLAI
IALLLSSGVRLSEAVNLDLKDINLKRMVIDVTRKGGQRDSVNMASFARPY
LENYLSIRNKRYKAEKQDVALFLTEYRGVPNRIDASSIEKMVAKYSQDFK
IRVTPHKLRHTLATRLYDATKSQVLVSHQLGHASTQVTDLYTHIVNDEQK
NALDNL
>stu0259 xer2, Integrase/recombinase, tyrosine family
MTISSFQKQLTTQITNFLARKTISDSSKQAYAYDLKQFVNCLPGRVDQTS
LKLYENQLKEWKPSVQKRKRSAVNQFLLYLYQKGELEEFFKLSETAPLPS
QQEELEIFDLSSLYEGQEGPGKLACLFILELGLLPSEILELKWEDIDLDF
GVVTVAKGSTKRVLRLDGALKELLFGIKNDNSQGLILSKAFTRQWLYKQI
QSYVGGCGLSGVTAQALRQQYILRQIEKGTGAFELARLLGLKSPVTLEKY
YKT
>stu1218 xseA, exodeoxyribonuclease VII, large subunit
MSDYLSVTSLTKYLKMKFDRDPYLERVYLTGQVSNYRRRPSHQYFSLKDE
GAVIQATIWAGVFKKIGFDLEEGMKINVVGRVQIYEPSGSYSLIIEKAEP
DGIGALALQFEQLRKKLTAEGYFDDRHKQPLPNFVKKIGVITSPSGAVIR
DIITTVSRRFPGVEILLFPTKVQGDGAAQEIVENIQKANQREDLDLLIVG
RGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHETDTTLADFVADRRAA
TPTAAAELATPISKADTLAWIRERQNRAYQACLRRIQYNQERLAKLSQSV
VFRQPERLYDGYLQKLDRLTTRLETFMSQDFERKQKSAEFLRQRLHGLNL
STRVKNYQDRRESLQRLLVTTTKNTINGNRVRLEKAQDALLSLDTSRIVA
RGYAIVNKNDKPLTTIKDITEGEQLTIQMRDGQLEVEVKNVNEKNI
>stu1217 xseB, exodeoxyribonuclease VII, small subunit
MSTKKTFEENLQDLEAIVTKLETGDVALEDAIAEFQKGMVLSKDLQKTLE
DAEKTLVKVMQADGTEMEMDA