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# Vibrio fischeri ES114, ES114

>VFA0384 ATP-dependent RNA helicase
MSESITEFRQLALDESILSALDDMGFVAPTPIQAASIPLLLEGRDALGKA
QTGTGKTAAFSLPLLNKINLKQHNPQAIIMAPTRELAIQVAAEVKNLGRN
IKGLKVLEIYGGASIVDQMRALSRGAHIIVGTPGRVKDLLNRDRLNLGEV
HTFILDEADEMLKMGFVDDVTWILEKAPDTAQRILFSATMPPMVKTIVDR
YLREPARVDVAGTNHTVDKVEQNFWVVKGVEKDEAMSRLLETEETDASIV
FVRTRQDTERLADWLSARGFKAAALHGDIPQSQRERTVDNIKNGVIDILV
ATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVR
TNQMRMLRTIERVTKSTMEEIQLPHRDQVAECRLAALAAELQADKEFVAL
DAFTDLINKLQETLEIDATTIAAMLLKRQQGKRPLFYKGPDPMIAAMERA
KNRRSDRGERGERGGRGDRPERGERRQYNNDDFDTYQLEVGREQGVQVKD
IVGALANELGFTKGSIGAIKLAPGHTYVQLPKKMSADVAGKLKKLRIRQN
ETKAVVVEGVDLTIERRPRTGGGRDDNRGGNGRGGYRGNRENREGGRGGE
RRFDRNKGGDHRGSHRGERAPGGRGRGRSERSEG
>VFA0501 hypothetical protein
MSEVENTQKEAIDLETISPELKKVIEFENVPEEMWHMLVSVHEVAEIAVR
ESWDAMPASAQKVLDNFEQFHALVSLSQSYAGYDFMAEFENLDLPENMDE
DAQAEYRSQLLDQVLHNCVKDLVKQIKKARRDPIMKRELAEIFKK
>VFA0553 ATP-dependent RNA helicase
MTGYLSIILEIGVQLLQFKDLGLDNRLLKNLAHQNIKTPTEIQRKAVPVA
IAGKDVLASSKTGSGKTLAFVLPMLHKSLKTKSFSKNDPRAVILAPTREL
AKQVYSHLRAMLGGLTYDATLITGGENFNDQVNALRKHPKFIVATPGRLA
DHLEHQSLYLDGLETLILDEADRMLDLGFAEHLQKIHKAASHRRRQTLMF
SATLDHDAVNKFAGNMLDNPKRISVGLSNDEHKDITQRFYLCDHLDHKQA
ILNKIIETEDYFQIMIFTATRSDTDRLTKLLNEENLKAVALSGDMNQTAR
NNIMSQFERRVHKILVTTDVASRGLDLTSVTHVINFDMPKHMEEYVHRVG
RTGRAGKKGTAISLVGPKDWESFKRVETFLQQDLSFSVFEELKGKFKGLK
PKHKRTFVKKGDPKKFKAKGNQNKPKAPKKRDNSFHTNVAVGDQVFMPKK
KPKQIVVDDE
>VFA0395 hypothetical protein
MLLERIEVSGFRGIKRLSLSFEQLTTLIGENTWGKSSLLDALSIALPISG
ELHQFTLKDFHQDHSISYTQDQHIQIIITWQTTEKNEHKAGRYRKLSSLW
QHDANSNTQRIYYRVSATNNDGKITSSSSFLDKDGNVLRYHRIECLVYEL
IKLHPVIRIRDSRRLSPGPFTDHVPDDRIERRINNTCRRLLTAPGQVSSG
EIKSALQSMQSLVDHYFSFRNHRRHGQHKVRDDLFFGQKAEGVSLNQFVN
QNQSKQTKLLLLGLLNTYLRAKGPNTLKQSARPVMIVEDPEGRLHPTQLI
QAWTLLNHIPMQKILTTNSSELLSAVPLSSIRRLVRESDSTSSYALTPTS
LSRDDLRRITFHIRFQRSNALFARCWLLVEGETEVWLFNEMARILGYNLA
AEGVQIIEFAQSGLKSLIKMAKALHIEWHVVTDGDPAGKKYAFAVKNQLE
NEHERHRLTELPHKDIEHYLYHHGFEELFRTLSNISADQPVPPKKIIVKT
LKKYAKPDVALAIVEHCEEMGPESIPLLLRWTLKRTVTMAKGQG
>VFA0542 superfamily I DNA helicases and helicase subunits
MKKALALHYNLLQGHPFGQLSKPLLSNQDTLIEAHGDIKPNAFGALSKLS
CLYPYKGFETYNKDLLKTLNDVKVSKSKESDSAGDDNQSLDKKLPTFSGD
RYVLAIDVNPAYGRKTITVMIIPVRIKNLSGNYNRFVFYPDTSSFPIINP
ELLEVEGNVPPHCIGKMENFDKFDYSVFKEPTEDLHELFTVSEAMFDKIC
DTTLGSMEHHESLGLDNPDVTVTLRRVMADNSANQHIINLYRDLFTVSDD
SLTGTSVCKTDSAYKDNGNVKNLNDDYLISLLQSREKPFLAHMDECTGTD
TGDYRHRELFALDNTQRGAASVATLMREGDVLAVNGPPGSGKTAMLKAII
SHQYVEAALAKGDCPIVIGVGGTNQSVTNIVNAFPNVLYQGDSKTLLHMR
RWIDGPANYGTYFPSTSIKNNMSPELLKSAVLGEVDKSNKGGVVRWSGEL
ANLNNPSKLDQLIGQFTNYCGQHYTTTFSDLESCVAQLHHTLTAYSKAIN
TLYYQLVEEFDKGFETHPSIHTSFSKFFDEKHSNSQGAAQIKTMYDLLHG
DDSKKIQIISDVCREYLRDNDLEGNNPAILANFGVLSGMAKVILADRAVD
LLVRSELFHYAARYWEGRYLLSCSEHFLIYASPSNLETALRRMCMITPIL
VSTVQSAPKIFAYQKPSGISEQPYLYGKADLLIIDEAGQADIRSTLPLLA
LAKKTIAVGDIAQIPPVIQDVTPIQEQGLFQTLGMGVNEAHTKRCFVHAF
KNQLLPSISGSILHVLRQISCVNHQGQGMSLRGHYRCQEVLSQFCNELVY
DNSIFIIPPLFKERGPFRPLTWVSSASETQKVGTSHKNEKEARTIVEWLI
DQWPRIHDHYNKPSKPKKRLPDLVGIISPYKKQSLVFIGHDEDDSGSKGK
TQGMLHSLLIKKFKGTEYEITVDDVDKMKIGTVNALQGAEKPIILFSGTK
SIKFGGDVHYRAAAYILNVAVSRAKECFVAFICEKTFGIPTVTEGLIPPT
DPKSDSVGYLGYYIGKRGERLFPRSVVIIESDNKIKKLEALLGKRYIVVS
TKGKVLGLPFSDEEALLVKNGLHPKYQYNVKKNPKKKSNDKGNAARKAVS
DILQLCGGADIDEIILATDDDNVGEHIAWHLQELFRQHQPDSLKKLQRVR
LRGLSPKAVKEAFDVDNRDSLDIARASAEMVRESLDLILGRKLSAIAQKC
PLVGQGESVRLALEKRLIQEVDEPQVKGMGRVKAAILSLAYGHLKEQLAS
ITHPTEAPVTVIVNGKKLRGRLVQQRQKTEGQEVDKSIEYIRNKAPFESE
GSGWTVIESEFEERTVSPPDASTLNVMRQNAIEQQVKPVESYKALTGLYE
GNDL
>VFA1158 hypothetical cytosolic protein
MIEKFLAFSEKKSAVHFVIPEDASLTSPIACSDIDNALSAMGIGHYYQYQ
SSINEIIAAINNGDITSFNNVMIAQCLDAQLVVHMQDDEMKASMTVTGAY
GGHPVRGPEIIQALTENGITKGVKKEALKVLLLKGKDLAPGETYSDVIAV
GREAVEGQDTQFEALVPNIHERVLQPQETDDGHVDMRDLGNVISVKQNTP
LMRRIPATQGTSGKTITGKIITATPGTDTPFQVYPGSSISPTDPNLLIAD
IDGTPLINKSGVGIDNLLTLKTVNATSGHVSFEGSIFIQQDIESGMKVTA
TGSITVGGFIENAEVTAKHDITVMHGIIGRPVQDGEPLTCIVSSEGTITS
KLAQNAHLMAHKDVHITLHANHCLIESLGSIFVIDKAERNGTISGGNLIA
NGAIKTANLGIEGGAYTKVQAFHDFETQKEGLHLLQKQINEVKTQLIKIS
NIQMEQQPSELAEKILRSKEKSEQDLQVLGSKLQREQITFNNGLKDNTVF
VTNKIFPRVDVQFNTHHLVTKREYSPSKISYSGYEIDVEPIMIKKK
>VFA0459 transcription-repair coupling factor
MCQAKAMDRLVCGDVGFGKTEVAMRAAFLATHNEKQVAVLVPTTLLAQQH
FENFRDRFANFPIRVEVLSRFKSAKEQKEILAATAEGKVDILIGTHKLLQ
DSIKFDDLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNM
AMSGMRDLSIIATPPARRLAIKTFVREKADDVIKEAILREIKRGGQVYVL
HNNVDTIQNAAEEIEKLIPEARVTLAHGQMRERELEKIMGDFYHQRFNVL
VCTTIIETGIDVPTANTIIMDRADKLGLAQLHQLRGRVGRSHHQAYAYLL
TPHPKALSKDARKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDGQSG
QIQSVGFTLYMEMLEQAVEALKEGKEPSLDDLLREQTEVELRLPSLIPED
YIPDVNTRLSLYKRIASVSSNGELDELKVEIIDRFGTLPEATQTLLISSE
VKMLAASLKVKKLEAHGNGGYIEFEPTADINPMFLVSLLQKDPTGFALDG
PTKVKFIKDLTERQTRIKYVMDLLKLFNENRI
>VFA0127 hypothetical protein
MLAKKMDAPLDMQNGARFKTKKHGYVTVIEYYNTHTVIVAFENTGNIRAI
SAAKLRSGQLADRSVPPESIMVGEKVESVKHGILTIVQVESENIVLLTTE
SGEEVRMLLPAVQKMKSKAEEPITTKEEPELPTSLSALTKRNKKTKDVNN
LLKKMLTDYGK
>VFA0349 DNA polymerase III, epsilon chain
MPDKSLKNKNIITHMMDLFSNRHPLHRLEEQRQALIEQNLTLPDYLVCFL
KSSYPSPKENSNDMAFTVVDFETSGLNPKTDHIVSVGWVHIIDGVIKLSS
AQHHIINEPTSISAEDGHEEREHIARSLHHILPEQQKMGISLEEAMECFF
SNLPSNILVVHGATIEQRFLEQFILSLQLPNLPIIWLDTLRIEQNTIQQN
RYQRDFRLFSLRRQYKLPDYPAHHALVDAISTAELFLAQKKRLFNQAIAP
IGFLYQKSQ
>VFA0548 DNA integration/recombination/invertion protein
MARQVIRLTDRKIKSAAPTGKEFTLSDGEGLQLRVRPTGAKSWQFKFSDP
VTRKIQKIALGPYPELSLANARSKTTEYRTLLAQKINPKSFEQSKELEAK
RVQTSTFIVVAEQWFERKKETVSPAHSYREWRTLEKYIFPHMSKIPVATI
TAVETIDVLRPLEKEGKYSTVKRICQSLNQIMDYSVNHGLIHANPLAKII
KVFRKNTVLHMPTIRPEQLPDFLKRLHSCSTIQTKTKLLILWQLHTMTRP
KEAATTRWIDIDLEKGVWTIPAENMKRRKEHRIPLTSQAINILNQIRLQS
KRCDYVFPGERDINSHVSLFTANAAIKRSLGLKDELVAHGLRAIASTALH
EYGFDSLLIEACLSHADQNEVRASYNRSDYLEQRKEIMCWWSNYIDEAA
>VFA0135 DNA helicase II
MAELIPTLNTCLSKMTAGEKRFAQRVENLLEDDYICWYDIPVGRQRRYPD
FIILHPARGLLFLEVKDWKLDTIRNIDASRVELLTSKGIETTSNPIEQVR
QCSYQVIDKLKRDNLLINQDGKYKGNLCLPYGYGVVLTNITRIQLDRAIP
LDAQDSVLPHHLVICKDEMVSTIDPEKFQTKLWNMFNYKFGNQLSLPQID
RIRWHLFPEIRISTSEQQTLLPLEDTNELINPNDHIPEIIKIMDIQQEQL
ARSLGDGHRVIHGVAGSGKTLILGYRCLHLAEQLKKPILVLCFNITLAAR
LRSFINDKGIAGQVQVYHFHDWCGQQIKTYNLDIQKGEAPYWERQVETVI
EGVEKGNIPKGQYGALLIDEGHDFEAEWLTLITQMIDPETNSLLLLYDDA
QSIYKKKSNLDFSLASVGIQAQGRTTVLRLNYRNTREILSFSYQFAKQYF
DNSDTKEIPLIHPESAGITGSHPVVKKFSTMDQEVEYAVKCLVHWKQNGY
AWSDIAIIYPCKHIGKKVAEALKTRSIPHILLATSEHKKQYNPINDVVNV
LPIPSSKGLEFKTVVILNSSNIPKKSDNRSEDIRRLYVGMTRATHNLLAT
YHKENELSESLEAAAISINK
>VFA0815 DNA-3-methyladenine glycosylase
MRKERCHWAEVSDLDREYHDNEWGVPVYSDHELFEYLILEGAQAGLSWST
ILKKREGYRLLFDGFDLQKIIQYDQDKVESLMQDSRIIRNRLKINSVITN
ANAFIKIQQEFGSFSNYLWSYVDQKPIINHWEVINDVPATTELSDKLSKD
LKKRGFKFVGSTICYAFLQATGVVNDHLVNCPCYAKNNK
>VFA0522 DNA repair protein RadC
MSNKSSHYLKQQRYQENEILEHAAEILANRYVRGDAFSNPTATQNYLRYK
LGHYEREVFAVLLLDNQHRLIEFKELFQGTVDAASVYPREVVKAVLEVNA
AAVIFAHNHPSGESTPSQADKRITTRLKEALALIDVQVLDHIVVGETCVS
FAERGLI
>VFA1157 ATP-dependent DNA helicase RecQ
METQLLRLSKDSNVRQLPLKTLLVYLELKKIIQAKYSYYADYRFKTLIPV
NDIIAKFQTERQQFVSTIFQCSPKAKTWHTVDFDALWMGFRGERKRVIAA
LDYFNEQGWIELESKQMTEVYQVLNKVESTHVLSQEQHQLFKNKEQSEIN
RIHAMLDFFETKSCLSHALAHYFADFNAPEQCGHCSACRSEAAVLPRSSS
HFIADDENVKAWCQELQNSSKEPLANAVFARFLCGIPTPLTSKIRANKMQ
GFGKFESQPFFEVLELVGKLNG
>VFA1129 hypothetical protein
MEKKTKDSFPYNVLNHPSITSTPLVFASPGLTSIQYAIAQLSLDHNESVM
DFAFEYLQHANLSQAKEFRTRGYNRFLPQFDFSLRDELEQHVQRLESDIE
LHGININSDQLRDVQIIAGKLRSQIECISQVQDQESTQERVEKWIEAHVP
KKIVGEARPLERALGVTRHAKPEEHYGSRKVAQSLVRRLEGALKAMNLVA
QSLSELVINSNSEQYDIHIERELIREMAHDYHKIAPVSPSPEMCSQLHEK
VNTFITDEKLDEKAEVDSEGMYEQAKEAYSAQLSEEELRAEINAITAQSP
KDERRRLWLQIRDERVVSALEQRLTFQNKACDDIQNEITKLDKKLNGVSL
PLIKNIHLQPSSSLPFKGEACTYLAVTEGLLSNALAIIKTDKLKTANRLS
EELKNLKQYLPKEKNQTYSMMSIAAIEKGVQEIKSGVVKATKAVFVSEPV
KALSQQLTKLEKSVKDTNDKVLLVANKAKGKGHVSYRVLDEKCKDKKTSQ
LISDSIVRSVLWQLQQSMADLQQAAQPLLSSSKMLAQIKAPLPENFDHEF
KSTSSPSPLMDILLHKRHLESPEMKMWTKQSTLNEILVKHVEQVKAAVKA
LETNERSDSPIDILAAFKLSFYKKATDLSNELMSALDLSLAEQEEINNRC
HDLLMEGDKPLLERMAKTQFEVIELLNQAVGLATSSPCHFSQVKDFTERA
ILKSLLMKVRLAERSAQETGRDLDDTSRGARIAKHWAMILAEKIEASQAL
PSPGEVLALINRYGLNEETHSSGDPKGALMATRLSAELARAQAGTLLPVM
TPERYAEYEKDLVEFMVAWGQRRFTRGVTEHVFELALSIPTTFMFNIFSP
LYRLPLASLRIPYKVYKTKSLIMPGSDKPYKAIDMMVKKRMKQLGFHMVT
SPMPTVMKTALGGVLAGAGYVYNKHVSGKEQTLDGIYEQVVNGKQSQQLR
MDGLGALALRSVTALSNSGFEVLSDHVQRQVLTLSTPVESFNSPVVEDEL
LDDVWEDSIFDDPMSLELNSDSAVLRRVRRSLDSDDSQSNSPRTSALVDE
YYTRFNGDVLLFKEKAYNKLRGMPLGEARTNYIKVRLKKAQRMVSLAENE
EQKRFLQSAVSILERACDSESDIDCMSVFYPPLSQVDGVLYESINTRFEI
TPKYEHIQMLINYQKSLWSEFLTLDKASFESRLEEEFQKAQQAIGGRFIY
RRHMSSQEELNYHALTLIKHLQVEVNRYNDFEEQVQSLVDDLKSSQMNSD
NYSVSELHQTILERAREGKQSSPYSFDRVMYTLCEQALSIDLKQAEYQEH
IEKITSTIFTDIRFDDYKVSLLPSERIFVRNNLSLSSENLSNEILAYRTG
KRLSLHINIEDIEHAYLNSLEDRLLPDGSLSTRQDQIDEITLHGGLIAYE
QEILRSNRIIQAQRSIELASLSHKFWQDEGISQPNKVSYVYNYPYLPAAD
LYTMPNENAPRAAQIENLEYIKRIEPAYNRVIESKMGPKYLHVVNRDELR
SSEINWDVGHYRQCLEQRLIDLVAAQPEEKKSYLEQVLPRVLTPQRYTTD
KVMSPYFIKPSIHDLPLENMLLLKDGDRYTVISLLPPSGRIEIVTGHDEL
KSLFTDLENHEWVLSHASLYNQMDGRHQYGMESALEGLRAGTSNWSFMSE
TSNHRMSEPDVLRSIARSSMGTQGSGHYLRTNLVEAASNSYWEGISGEHS
IEISGDYSLPDKFNEPNGTASFERLYEVQKQADIQRLAEQAIDQFKEEHF
DVYSAHLKATCYRLIEEAWRKHEDTPLMFRSNLLIDKMRHEFNEVNISLP
GLVGKRGGHVPLEGMMMFHDPDPRKAQYVMVSLLGEGALVEFNSKMEVYQ
FFANPGNRHFLLSHISEYNKQNDVLGVSTPADTLGDLEEQSLNYPSSPPV
GISPYWASTETTFEVPMEPIEARSWDLIGTGLQFAIQEGIHNATTVTTEA
LNLDFIPLSNDRSVNMFDTLANRNLQRLTSDADALFKSHDEWRTEKALEI
TSAVLAVPAVVLSVAAVAASGGAAALPLAAAALAVDSVSFAVSLAEASYI
ISQGDTEEERTMGYIPLALAPLDLLGVASSTNDVLKALKVLKTSRATIQV
ADNLDDIVGATGHTANRMQDGIAHLNTSLTQPSDLSALNRTASNLDTSVT
LSHAVDEQLEQIRCGIEELNDLEIDLNNLTQDYPVGTAPMASLTDFTLDE
QLQVAVQRLSAPKIVRGKWGGMLVDDGGAMSAVRSSHGEYLFSDTPTGAK
SIGISASNEATLMQYLDRYATRQVASDIEELSEIYVRVGPRPGSTRLKGL
FPVEDATKGVINGVTNLSIRTGGIQGPTMIGMQTPGGLAKPLSSVIARYK
KIIGWEKSLSGGKGHGLMLEISPYPGAGMIKVGDGNVSFGDIATALRGSS
QELRPQVASHTSEIGLKGRSMNWNNTPIRRPMLGGEVWEGHSNVLPGSDD
DLRLYLELGGNPEEYLETLKEVEPEISDKGFMEENKRWQGKVESGRFFVK
ESKQGSSWELGNWQQEVNWRFKYRKGLVETTEELDKRILKASRNDTSYGH
SNIVVALNDAKQSGGVEPKVVRWLQASSMDIDSQDYRVAFGLLDRPVNST
LEVGDLSQSGFLHLCDRDESGNKRFHHVIYVHVSSDGIHFYQIDHTSLQQ
ELGQGVILRELKDGGTKLHTKHLLDEDSIAAFNHYLSTNDHNYVFTSVDD
VHRNFVGTQTQIIESNDEFEVVIGNQSRERMQVLSPSKLVGRMTLGGDSS
PILSDPLVQYTDRFKGQVNVQAVSIHADADGFFYYKDHINTNSDRMAHTP
AEFVQYLQTQGIDLTQGSTPVHLLACYAKSSGSAQSLADEIGRPVIAYSN
RKLQINTSVLEDPSLELTSEANKLRQLLAKDDFKPASHRVFYPENSSNEV
TNASSSKDSLPLRSNEFLGNKTIKPRSQFEQSAVDHTAEIVKATYQKYQS
TPLENCENAAREIVDTLKAHPSYSDVRLGNMAFWEGAHGRNADSYMNHWV
VMTKFNGIELVLDPTAHQFSNKLNISTPVLDTYENWVATYQAPLSNKRMM
LVKIAEVPHFSSAPFKSNDEFSGFRYIKDAKVLSSSRWYHQSGYDQYIGS
LIGNVRKTFFEAEPSTAFAQGTFEGSSSILDGGNGQIKYFSRYKQGKIQE
GVFLVSLDSGATWRRGSWKEEAIFRLDSRNAPLALSELDQRINRASNRDS
SYSRICYTGAFNDAEQAGTISPKVAEQLHRVIAKRDEAGQIMMSDNYQAV
FELEGRHQRHFDRSMFKESGFLHVGEVGSDDLVHYDHIVYVHVNESGVCF
YQVNGSDFQLALGDSDEIGINVSASHGKHMMNDTRVAAFERYFAENPEAV
FTFTTVKQVSENVQYKQALAAMVQEGLIDYDTYKSSNDILEAEENVSGFV
PQESTVGTKYVYFPSLNRELINSRFIPLLRHLKRTNAAPFEIVFKNREQV
QGFQRILTETYGSIASSTLEPDLQYLYSVGKTNLHDLSESDTLHINGVAY
IGEFANGEYSNVGPLAQELVAMGLPARAMIKITNKAAPPTYFLTPFSKPN
EEEFDNSFAGQLERELVTLQSERDLGLVSSNSGVVNYQSVDSTILSVIVG
REIYTRGDDSAYCKVRGIIDYFQAQDLERHRVFDPLPTLEKGEVTDTDVG
MNVFDTARRYAENSDPLIRQYNNGQGDIILQKDRYGECSSRTLYISRSLN
SHSFESALSIARQRTSVGKEPINILLLKNMDNINLIEIIGALSRAGQYDK
AFFYTGEPFSNLVEIIKRPDEAIQENEQVLELRVTSLNKEWVAHALHDDP
FIKS
>VFA0524 ribonuclease H
MSTNTYSIYIDGAAPNNQGGCMKGGIGIAVYDVNNELMDTCSITVNRATD
NAELELMALVEGLEYAADGDIIYSDSEFCVKGYNEWLDGWKAKGWRKADK
KPVAYRELWQQVDALRKEKYVEVVKVRAHSGVEGNEKADSLASMAARK
>VFA0512 hypothetical protein
MPKDLPELLKKINYASIKPITRCLLEWQLHTMTRPTETAGARWDETDKEK
MLWVIPAERMKKGRVHTVPLTQQTLDLLETIDLSLARVNTFSLLIKAIKI
I
>VFA0460 transcription-repair coupling factor
MPIKNLLSLSLPTKANDTRSVGNLTGSSLALAIAEIEQQHQGPIIVAVTE
PQLAFRLQNEINQFSQNAVDVFPDWETLPYDSFSPHQDIISDRLSRLYHL
PQQKNGTLIVPVSTLLQRQSPQSFLHKHALVVNVGDRLSFDKLKLQLEKS
GYLHVDQVMSHGEYASRGSIIDLFPMGNGHPFRIDFFDDEIDSIRQFDPE
NQRTIEEVKSINLLPAHEFPTDDEAIEDFRIRWRQRFDARREPESVYQQI
SKGAWPAGVEYWQPLFFDETETLFDYLPDNTLLVTIGDIEKAADDFLADA
EYRYDQRRVDPLRPLLPVNELWLNTADMFALFKQYPRVKLSKEPEKEKAG
RFNPDLLELPEIAIQHQNKEPFAQFRQFYEKFSGQVIFSVESEGRREALL
ELLARIKLKPAICETMKEAMSHKNKATLVIGSAERGFILQDPCVAFICES
DLLGERVIQRRRRGDKQSASSDTIIRNLAELKIGQPVVHLDHGIGRYMGL
QTLDVGDMPAEYMMLEYQDQAKLYVPVSSLNLISRYSAGADETAPIHKLG
GEAWTKARRKAAEKVRDVAAELLDVYANALLSPVLPSNRIVKLMLILKRA
SHLKRRTIKTLRLMPYYRICAKLKPWIALCVVM
>VFA0753 deoxyribodipyrimidine photolyase
MDYKHNLQCVWFRHDLRTIDNPALQAAVDNQQPTFALFIYSESQWKKHNK
APIQIDLIKRRLVELKNELEQLNIPLIVISSPLFSEIPAKITALFNELSV
NALFANKEYEHDERLRDTQVYESLLNTNCYFFDAKCILPVGTIINRTQQP
YKVFTPFKKAWKASFYQQQPHITKTGKSVLCDPKLIKKLSLNNDDSFVFS
SSNESGSWPVSTKAIIDILRQFCRQKVSQYHNNRDYPEIQGTSQLSPYLA
IGAISAKQCALRLHLEANYELNQGEDIWLDELIWREFYTHLLHFYPNLSK
NQAFLSYDKYIEWDNNLDHFERWCKGETGFPIVDAAMKQLNTTGWMHNRL
RMITASFLVKDLHIDWRWGEQYFMSKLIDGDFASNNGGWQWCASVGCDSS
PYFRIFNPITQGKKFDADCTFIKHWLPELKALSNKEIHHPNPAPLLKSDN
YPDQIVDHAQQRIKVIEVYKQAKQLDIAS
>VFA0625 hypothetical protein
MSHYTKLIFTFFLWLGLLTPAFSVEPVNSDFFGKAIKGYDPVAYFTESQA
IKGNKNITYKWNGSKWYFCSQNNLKLFVSNPTIYAPQYGGYCAWAVSEGY
TAKIDPNAWDIFEGKLYLNYSKSVQKTWRKDIKGNVVKADVNWPKLLME
>VFA0177 O6-methylguanine-DNA methyltransferase
MNVYTQFESPIGQITVNANDEGLLGVWYESHKMELSEFGTRADDHPILKL
TVTQLKEYFRGDRRDFSIPLAAKGTEFQNKVWKALTTIPYGKTWCYKDLA
IAVGNPKASQAVGGANGKNPISIIVPCHRVIGKNGSLTGYAGGVDIKEKL
LALESNK
>VFA0513 DNA integration/recombination/invertion protein
MGFKGRQTSHGLRALASTILNEQNFDADIIEAALSHVDRDKVRSAYNRTD
YLERRKVLMA
>VFA0571 DNA integration/recombination/invertion protein
MDKKHFLSAQLDIDTLATCLTKQYSNNSLISFKNDWNNFVEFCQLNNVIA
LPASTTAIRIFIEKQAKVKKLASIKRALISISHIHTAFEYKDPTQSIQVK
SALGKIRVDKVNDNKQTEGISSDMLDELRHQLFNSVELKDIRDLAIWYLM
FELLLKRGELRDLQLDDICFNDETNSCLVQIHQNYYAISEETTELLNRWL
QHSNIYDGHLFRAIDRHQNVAVNGLNDSSIYRIFRRANELLNLEINFSGL
SARVGATKELAQRGYSIHEIQEMGRWVSPAMPNQYIGNTERSERQKSVFK
TKKA
>VFA0408 phosphohydrolase (MutT/nudix family protein)
MRILNITTHPDLERLDNHKILHRNATRGIILKGEEILLLYTERYQDYSLP
GGGLDEGEDVIAGLVREIEEETGAKNISNIEPFGMYEEFRPWYKHECNVL
HMISYCYTCECDRELGETNYESYEIRNGMKPVWINIHEAIAHNEDIISNS
DKKGMSIERETFLLHLIAKECLNAE
>VFA0603 hypothetical cytosolic protein
MTEKKNTWFIYLIRTRVGSLYCGITNNLERRFKMHQNGKGAKYLKGKGPL
TLVWQHDVENKSIALKYEYRIKKMTKASKEALVINQIPLPTIND
>VFA0871 hypothetical protein
MIIDDFVWLPKSDLLIGKLEKLGWKTLFSVKTNDNNIYYCLSSTVYFLDD
KIKQCLLSSICVVNNEYKDCLVLFDEFHDVGFLWKDKKCINLKEQTLLDI
VGSDLDFSLKKNIIRISSINDIVDEADIKIRKYYGFYPLLISISFLILFL
LVGAWLWLF
>VFA0515 transposase
MKTKNQKNRNLTITKKDTFNGLSIYKHENGLVINYLDKIYNTIDKAITEY
PRTMVVRVDLRMSKSLLFDNSSVIKNFIASLDSQIQADLNRKKRKGIRVR
ACKIRYVWVKERSTSLSNHYHLVLFFNKDVYHCLGDFKNEDNLSHKIKKA
WCSALDLDINEGSRLVNFPNNGVYWLDKNSRNFDDDFDSLFYRASYLAKL
ETKKYGNGMRSFGCSLR
>VFA0126 DNA-3-methyladenine glycosylase
MSIEKFESIYERAALRKGGTAQLELLLNKPLPRSELAKIPDDRWLAAFTE
KVFQCGISWNVVRKKWPNFEEVFFQFRIQPLLMQPDEVWEEKAQDPRIIR
HLTKVKTIPANAMMIYSAGLQHDSFGNMVANWPSEDITGLWAYLKKHGQR
LGGNTGAYALRQMGVDTFILSSDVESYLRNYGIIDGGRDTKRVHLAANQA
FNQWKEESGRSLSEISQVIAYSCGDNRVLVSASEQ
>VFA0016 DNA polymerase III epsilon subunit (3'-5' exonuclease)
MSLINSKEAAPAHTVVVLDFETTGLSPNQGDRAIEIGAVKLENGVVVDRF
QGLMNPGFRVSPFIENYTGISNRMLADAASCDEVMNEFANFIQGCNLVAH
NASFDKRFLDGELALIQREYDGDFACSLLVSRRLTQEASSHKLGDLVAYH
QIENDGVFHRALADAEVTASLWLVLLETLEREHGIVNPSFELMMKIGKTP
KASIANFLKKNR
>VFA0154 ATP-dependent RNA helicase DbpA
MSQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKT
GSGKTAAFGLGLLANLNVKRFRVQSLVLCPTRELADQVAKEIRKLARAIH
NIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRVEEHLRKGYLNLDNLNT
FVLDEADRMLEMGFQDAIDAVLDHAPVKRQNLLFSATFPPQIKSIADRIM
NDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLKHQPESTVIFC
NTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVAT
DVAARGLDIESLDAVVNFELSRDPEVHVHRIGRTGRAGNKGIALSLFNEK
EMHNIAQIEEYMNIDIRDEALPSTDYLKEPAYYAEMVTLWIDGGKKNKLR
PGDILGALTGKDGIEGKMVGKINVFDFHAYVAVHNTVAKAALKKLESGKM
KGRSFRVSRMRG
>VFA0374 ATP-dependent RNA helicase
MVCYNQRQLLSIHRFIMSFASLGLTKQILTTVAELGFKEATPIQEQAIPL
VLQGHDVLAGAQTGTGKTAAFGLPLIQRLIESPIERHEESKVVRSLILTP
TRELAQQVFDSLVSYTQNTELKVVVAYGGTSINVQKENLLGGADILIATP
GRLLDHLHIKTITLNQAEYLVLDEADRMLDMGFIPDIKKILRKMPDERQT
LFFSATFSKKVREIAYYMLNKPKEVQVTPTNSTAETVEQMVYPVDKHRKS
ELLAYLIGSRNWQQVLVFTKTKQGSDELVKELKKDGIKAASINGDKSQGA
RLRALEEFKTGKVRALIATDVAARGLDIEQLECVINYELPFKAEDYVHRI
GRTGRAGHTGKAISLMSMDEEYLLKAIETLLDTRLPQEWLQGYEPDPNAP
LREDRPRQSRGRSSDKRKMKAKLKIHANRGKNKR
>VFA0581 RstA
MTKKTVNLDEIKEIDTNLSPYVFCDWLSFTFPYVDLRHLHKADLSDMRFA
PVPVHPSRKNGRKLKFRKMPKPNYKLVKNDEEKKRKLEDIYKQQFNVMLH
DRLEVFCLIVLGLRLGNWREKGLNGYENSAGLYVPNTTKRVGFVALGGNN
GTCFFQIEGAGCKHVFNHTDGFRLHWWLTIVGVTRLSRIDLAIDDFHEMF
GREYAKKAYCDDAFRTSAFGRAPNGGERVVVSPNGEIVNESFEVGNRQST
VYWRIYNKAAQLGLDFFWFRSEVELKKVSIDVLLNISGYFAGSCAYSASI
ISSTPVKIVSNKKKACLDIHSQIRWARRQVGKTLFDIANHFNGDLEKTFG
ILANGNPDGDSIQLNDKFVLPNVYKKLMIEILEK
>VFA0132 hypothetical protein
MKVEAVGKIQMESIEREKSQEVLKNSISNMKMQNEGVYDQQAINFALKRG
EIKEQEIESRVNRLKIYMDKQRELNNIA
>VFA0652 hypothetical protein
MNYVSGEGYEVGETLFSTDIKLSPCSDFKNFTIFRAYCRKFNEIDIKQIK
IDDDDCGFLIPSFSLLSQDHDYSSKGNFQVFSDAIIKWHLSNLDTENLKS
EVPLDSFFNENLGFIAISNRNYSNSKDKERKIFFELINAGIYVDILHKSP
SFYTENPLFPNKNLPSTKRITFKTTSNKAILDEFICDIFNSIIFNETDHF
LQFFYLYQVVETLIEFVMSQEYSKVMTKINDLGGGVSTQQLKKLVETLNE
SVQERKRINKLCNEYTDTYNDSFNIQQSLFDFIKQNLNSDFEVNNDIGSC
IYEIRNKSFHEFRTLRNATKLSSITPHVFDYILHLITSYKH
>VFA1156 ATP-dependent DNA helicase RecQ
MYQQTLKETFGFDSLRGGQQQVIEKVLNGHSSAAIFPTGSGKSLCYQLPA
LILPNLTLVISPLLALMKDQIAFLKSKGIAAASIDSTQTREETQAILQGV
RNGEIKILMISVERLKNERFRQFIAQINISLLVVDEAHCISEWGHNFRPD
YLKLPQDREALNIPQVLLLTATATPAVIEDMSKKFDIAQDDIVITGFYRS
NLDISIIPVEEEQKRSALFATLKQRPDQPSIVYVTLQQTAENVAQWLQSN
GIQAKAYHAGLKNDVRETIQYQFMHGEINCIVATIAFGMGVDKSDIRQVI
HFDLPKSIENYSQEIGRAGRDGLPSFCTVLANTSGLNVLENFVYGDTPDR
EAIQYVLDDIYQANETWETQLLRLSKDSNVRQLPLKTLLVYLELKKIIQA
KYSYYADYRFKTLIPVNDIIAKFQTERQQFVSTIFQCSPKAKTWHTVDFD
ALWMGFRGERIRAR
>VFA0543 hypothetical protein
MIQSNSAHEPIEIIVDEHELAETYKLLAQKHKSSSNDSYLHMSKTLNTLE
AFEKANNTGDCEYQMARVVLQSNKRGSVVVELETHVLVEQGWTEHLSIDI
ENTVDVGITKADLAAFKQGNFSVEISKPQAISNLTVEDLLSLMDKYMIGR
PSTYAELFAILQKRVIC
>VFA0401 hypothetical protein
MPTEKLPLAAKGLQLNFCKTLACDNFGDSDEQHYLVQRTNPKRPALVCRK
CGAFPPLINNQEVLNELARQQQVQSHSLPSCNNSECEHFGFDVLTHRELY
HAFGYSGDRQRYRCKSCASTFVDKWSGENQKSLIQQKLLGFLFTGYSVRE
ICRRLHINPKTFYDHINQIASRCRRHMSLFDSRLQHDRTSIQLASNATPL
QPLSNNGVFWYASAEVNSGYVIAQHINYSETDEPGTLLDHDPFQENAQYL
SNTFVNEANSQPAIGSKSIFKRVDHKYQEILARANVEDPLGNYVSLNYPS
KGAIIRPPYTSHAHFLEIQKAFSHCDSIEIYMPQEPMLRSAAMSIFLERI
KENSIDLLYVTQDIAFPTEESGDKIDIHLVGWWRDRWAFTEINGQHKGIC
HLNGAEHNEAYWLKRASATVANEYQTRFYNQFTNLVNEPRRKLRPASLLP
LLDIFRAWHNLCHQDKLGITPAQKLGLISKPITLAELLS
>VFA0151 ATP-dependent RNA helicase
MGFTSLGLSAPILKAVEEQGYSTPSPIQLQAIPAVIEGKDVMAAAQTGTG
KTAGFTLPLLERLSNGPKRKFNQVRALVLTPTRELAAQVHESVEKYSKNL
PLTSDVVFGGVKVNPQMQRLRRGVDVLVATPGRLLDLANQNAIKFDQLEI
LVLDEADRMLDMGFIHDIKKILAKLPKNRQNLLFSATFSDEIRQLAKGLV
KDPVEISVAKRNTTAETVEQSVYVMDKGRKPKVLTKLIKDNDWKQVLVFS
KTKHGANRLAKTLEEKGVSAAAIHGNKSQGARTKALANFKSGQVRVLVAT
DIAARGLDIEQLPQVINVDLPKVPEDYVHRIGRTGRAGATGKAISFVSED
EAKELFAIERLIQKVLPRHVLEGFEPVNKVPESKLDTRPIKPKKPKKPKA
PRVEHKDGQRSGENRNGNKQGAKQGQKPATKRTPTNNPSGKKEGTDSDKK
KRPFSGKPKTKGTGENRGNGSNFGKSKSTPKSDVKPRRQGPRPARKPKAN
>VFA1102 hypothetical protein
MAYVEPIKNKEHLKYAAKYLQKNHDPAFSLIWNIGLETGLRISDILRLKY
SDIDFRSGHCEVIESKGTLARKARAKHRVLKQVKEELILHYQHNVKKLTA
TYITPFYQIEKLLPKEWILMVNERVSAAKKATPPVTRSFLFSKKMVFMLK
QRKEKFRHINSDSVFSRKTLLSNRAKGVDGLLTRQACWTVFSKLTQVLEK
IGSTAKVGCHTLRKSFARHLYFATGKDISLVMTTIGHKSESVSLRYIGVS
DDDIKLAQKTLITYLSS
>VFA0846 hypothetical protein
MHTLAQLQSGELQGITRLQLSEQLTEFPKEILSLADSLEILDLSNNQLTT
LPNEINQLSKLKIFFASNNPFTVFPDALAQCENLEMIGFKSCQIKQISEN
AFPPKLRWLILTDNQLETVPDTLGECNLMQKLALAGNKLTELPDNLSQMH
NLELLRISANQLTKCPDQLLDLPKLAWFAFAGNPFCKSDLKIKSVPTVSS
SDYTLENVLGQGASGVISKAHWNKAQTDFPQEIAVKVFKGEVTSDGYPED
ELQACLKVGNHPSLVQSLAQVNEENHLALIMNLIPAHYKNLGLPPSLESC
TRDTFPNGFSLSLEKINKMTSEMCNVFNHLHDNQVCHGDLYAHNTLFDNE
ANIIFGDFGAASMYHMLSTTQQQKIRTIEERALNHFIDDLMSVCEH
>VFA0663 integrase/recombinase (XerC/CodV family)
MDIPLDLKPDSQRFTDQLRIFIRTRALAYNTEKQYIYWISCFIRHNNYTS
KDEINAFDIPAYLEHLVVKQNVSPNTQKTALNALIFLCREYLQQSVDNLE
FKRSKKATKLPTVFTHGEAISVINELNHPTKLIAQLMYGSGLRINEALRL
RVDDIDLIHKTITIRNGKGNKDRTTVLPESIIPELKTQLEFVKQQHKMDA
INGDDEVYLPNAIAKKYPHRAKSYGWQYVFPSKQISKDPRSGQHRRHHML
DRSVQKQVTNAIKKLEIDKKASSHTFRHSFATRILERGGDLRTIQELLGH
SDIKTTQIYTHVIGLHFSGTKSPLDFD