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# Bartonella quintana str. Toulouse, Toulouse

>BQ05570 hypothetical protein
MVVKKCYSNTSILVGYLSHSAVKLLDIHSILLKVREDNMGGEPNLLRQID
STKKQLDEISYALILEYRKRQENERFLKQILLSISDQLFSLNSGFKETGR
LLFQEIRMLQSQMQCFYNNREKQHLLSEQESFSSPSKIDEVIKQLQKARK
KLVIESPHLFEKEY
>BQ10560 17-kDa antigen precursor
MKKYGLVTLLSLSCVSHTIAETALLADEYYKRALENTQKLDAAKSETAES
IYASANEITNKIKEINEKLRKAQAAEKTKPEEFQALQIELSLLQAQLQAD
TLKIQFLSMIQAKNTKTKEDIREEQTQKKHKDLQEKLKEKLGNSDVRL
>BQ09930 hypothetical protein
METRIPEDTPFDTHFLGETSLEEQYPLFYTPISWSAIFAGLVTALATSIC
LSFLVAALGLSQMDFSSSSPFEGSFLSVGIGSLIVMLISLASGSFVAGRF
AETSGALHGFLTWALLTLLMALQASFLVSSAASLSAKIVSESGATQKIVD
SLKTDVFPLLSKLNGKNVESFLRENTENGVDFDKLRSELRTLLKKSEISA
LDPDRLKQAYQKALKDVGSVLTAFKNDPSHSRTYLRELRHRLSDHIQTMT
AKFNQSEIIDDLMKGGMTRAEAQKAANHALDVYQTAEAKIGQTIKAFEQQ
ANTLSEKLNTAKNNARHGADKTAKTASHMGWWGFLGSLIGAILSSVLGYY
GYRSRKNSFTL
>BQ04020 Methyltransferase (fragment)
MLDISKKRIFCLKNVSIGVLLVAKSHKGICDIALGDTTEQLFQEVMLRFG
DVQQVDDDRIFKREVAHIIAMIETPKLVRKHDFSLDINGTIFQQKVWAVV
CDVPCGETISYKLLAQRIGMPNAFRAVAHACACNKLALVIPCHRVVGKNG
CISGYRWGNERKQILLQREQNENI
>BQ06080 hypothetical protein
MFIDTHCHLDFEDFSQDLDDVIQRALDANVRRMITISTQLRKLDKLLEIT
QAYDQVFCSVGTHPNHAYEEQNITAESLIHLSKHPKIVAFGEAGLDYHYD
YSSPKEQRKIFQEHIIASRETQLPLVIHSRNADIDMEQILREQIKEEAFP
FVLHCYSSGMQLARAGIELGGYISFSGILTFKNALEIREIAKIVPHKHLL
IETDAPFLAPVPHRGKTNEPSFVRYTAAILAETIGLTIEEIAQITTQNAF
RLFNKMK
>BQ09100 hypothetical protein
MTKTEKDWFQRLIDLIRSDGRTMIEISKAAGCGQNYVQQMIKGGKRPSVD
KLMAILNTLGNASAIYVITGFNISDEDLKLIALISSGDKKKIEALNVLLT
AENL
>BQ08560 hypothetical protein
MQFSPEQDNALKAVAAWLKDGHSPLFRLFGYAGTGKTTLARYFAETVDGS
VQFAAFTGKAAQVLRSKGASNACTIHSLIYCPRGEEEVSDEATGKKSLAP
TFALNRRSAAARAKLIIVDECSMVDEQLARDLMSFRTPILVLGDPGQLPP
ISGGSFFSNSAPDFLLSEIHRQARDNPIVRLAMDVREGRSIAYGDYGAAR
VVTRKEVNKQLVLDADQLLVGINRTRYLYNKRLRELKGFTENFPQAGDKL
VCLRNDPGKGLLNGSLWKVLTSQKETVKPAINLLVKPEESERGVVKIKLL
KAVFQDPDNEISWQLKKRHDDFDYGYALTVHKAQGSQWDNVVLFDESFAF
RDMYARWLYTGITRAAERLTIVR
>BQ00410 hypothetical protein
MEKSVRLSAFLFGLFFLLVSAFIFAQRSNTPSSQAAADNRSWFVSLIERK
LSAPNRQVRLHNIRGTLSSQMSIDAITVSDKKGVWLKITNAKMDWNRLAL
LRGRMDVNQLSVEQITFLRKPQGSSLVSSIEAGKFSLPKLPLAISISTLT
AKHVAFEQNLFGLSANVSLKGHLTLTHGDFDVDIVAHRLDARGSFSVLTK
ISNNDRTAKIDVSADEPQNGILANVLNIEKRPGLNLAIKGDGTFDDLVVR
LYLEADHHPILDGNVILASISEGHSFSTKLVGTLGLLMPPQYRSLFESDV
TLEAEARITREGVTHLDHMVIQGKAMNVMVNAQITEDGFLRRLFIDGKMA
LDKENGSVHLPVSEASMWANNLALTIDYGREGQQSWKGRFVIHHLSNQNI
HIRDAVFDMGGMSENLDDVASRHVGIQVNGTLQGVIKTKGASAESLSQTV
HMHLDTDIVSRKPILIHDFSITAQDFSAWLKGKVDHFVFKGNLSLKAQTL
ALLGLFSEQPLSGSADLKAKGTIGLMSGIFDLELSGIADNMKVGVQPFDR
LFKGNLTLSGGAAWNTTDLVLRRFDLKNQYANLKADGYFSSESAKMDLYA
QISDLARLDPKMNGALTIQSTARGHNNLIKLSTRAHVVEAFLVGKKLQNT
TLTIKTLMDNTSPVPSLTGSVKGEGTFAKKPLYLAASFKRSNQIRKLENI
DIRGGNAKITGDLSQTFGGFVKGALHIDADDISIFSALFLQDGKGKVKGD
FVFYEQDGKQKANVKAHVDHLDFAKNKIKKLAIETHILDPFGTAQFDGFM
NAEHVQTPLMVFNRLNVHGNSNNGQTSFTVQAMLPNHTSAQLSGRVMVIE
LPVGIKQEVQIETMNVKQRNFHAALPKPATIVFDKNGMTINELGVEINGG
RIVLAGNVQDTLNLRLTMNALPAALVNLWKSDLGVSGTLTGQIIIGGRFK
EPDVTYDIKGEGLTTVAFQEKKIMPFGFSATGKTVDKNLTLNADLMGEGI
QAKAEGRVSLDKNKLDFYIDLQNLSARLVNSLIEGQVLEGTMVGKIDIGG
TVKDPSAHFELSSQSLTVMTHKGLMSINMNARGSYKKSALHIENLVATGD
KGLDLSINGPLSLNGSEVKLSVKGTMPLAFVDLLLAKRGAHITGTARIDT
VLKGKLFQPQLIGNFSIVDGSFFDSQTNLELNNITLEGKLNGDHILIEKT
FASSSNGGSITASGRIFHDLQTDLVVHLDHANYNDGSMIFATLSGKMTMR
GHFFGDLVIGGDVIVEKAEVFVPDHFQNAKFLDIKNKNLTKPIQKTLEYA
DVKNTNQNRNVFQESSSVVLLNMRLTAHNQFFVRGRGLDTELGGRINLTG
PLSDVHPVGEFRMIRGRFDILSQHLNFDHGQASFSGNLNPTVYFVTNHNS
GDIHVTVTVSGTIDNLDVSFSSQPSLPQDEILARLIFNRSLNELSPFQIA
QLAAAAADLAGASNMSLLNALRTKIGLDDLDVIVDEKGNTGLRIGRYIHN
NVYLGFEAGSDGTTKGTINLDISRHLKAKGAIGNEENSSVGIFYERDY
>BQ00260 hypothetical protein
MIYKPRIFSISPGTSFLPHFVDSLLSGALLDNFAPDGDIQTALADTLIYV
PTRRAARALRTAFAERSDTKSTFLPAIRPLGDVDEDSFLFVENHPNTLNP
PLGEIERLLLLARLIRPWRENLPAHLRTMFGTEDVLIPTHTADAIWLAQD
LAHLMDEIETEAANWSKLKDIAPDMVAEWWQITLDFLTIVTQNWPQILKE
RQRSNPAEWRNQILKMHAETLYRTQPEKPILAAGVSGSIPAVSDLLKVVA
SLPKGAVVLPGLDLHMDEDQWNALGTTHEEKKTFDSFDHAANVFGHPQYH
LKKLLSLMKCQRIHVREIGQQSTIKAKRAALLSEAFRPASTTDRWIQIVR
DDYENLCADWSFIEAINEREEALAISVALRNAIEDPQKTAALITNDRNLA
RRVAAELKRFGIEANDSGGIPLAQTLPSTLLRLLLENVFQPDPIAFLSLL
KHPLTKLEQNRPRLREMAENFELFVLRKSTGRINLCECDQFLEKWIKTYS
HDTFENSTLDQQKCEEARLLCYLLKKAVEPLASLITQRKECTINEVAIAT
VEVFENFGRDENNSLVNLYQHEAGQALSTFLCELVSDQSGLKFQLREWPA
MFSALIATRSVTPSPGGHPRLFIWGTLESRLQTVDTVVIGGLNEGSWPIT
ARNDAFLSRQMKMMLTLEPPERRIGLSAHDFQWAMGMNKVVMSRALRVNH
VPSLPSRWLQRLETVIGKQVWKQIRTRGEILLHWAKMIDNTNMTACATRP
CPIPPLKMRPRHFSVTEIPTLRYDPYAIYAKKILRLKPLKALIHDPDAAE
RGTLYHAILAAFCTQVKNPNTANALDVLLNIGRKEFDKLNLPADIEAIWW
NSFENFAPFLIQWEQSLEPRKRYAEVVSQKIPIGTTGVTLSGRADRIDVL
PGKMVEIFDFKTSTPPSSKQVRDLLFPQLALETALFMQGAFTDFQDLTPT
NLFYIALNGKGEIAPQSILLKKGKKDIQSAINLGEKAWKHLIALIEYYQN
PQQGYLSHAVPLKKEYEGDYDHLARLWEWSSSLHKAGQS
>BQ04640 hypothetical protein
MRAKRVDIFFYHLMQSTLEDILPTLVERALAAFGRVTIQCVNKERRDAID
MHLWVYADEAFIGHGTECDQYPNFQPVFLTTGQENPNDSKIRFLIEGAIC
SDIDAYQRLVVIFDDHSDEQLNLVRAQWKKYKMENHNLIYWQQTEDHGWK
KQV
>BQ09720 hypothetical protein
MKKERRQKSFHRGVRAEKWAAWWLRFKWFHIAEIRFKTKCGEIDLIARRG
NLVLIVEVKARSTLAEAMAAVSRMNERRIEAAADIWLARQKDRALLDVRF
DLIAILPWRLPQHIPAFFTSDK
>BQ10850 hypothetical protein
METRIPEDTPFDTHFLGETSLEEQYPLFYTPISWSAIFAGLVTALATSIC
LSFLVAALGLSQMDFSSSSPFEGSFLSVGIGSLIVMLISLASGSFVAGRF
AETSGALHGFLTWALLTLLMALQASFLVSSAASLSAKIVSESGATQKIVD
SLKTDVFPLLSKLNGKNVESFLRENTENGVDFDKLRSELRTLLKKSEISA
LDPDRLKQAYQKALKDVGSVLTAFKNDPSHSRTYLRELRHRLSDHIQTMT
AKFNQSEIIDDLMKGGMTRAEAQKAANHALDVYQTAEAKIGQTIKAFEQQ
ANTLSEKLNTAKNNARHGADKTAKTASHMGWWGFLGSLIGAILSSVLGYY
GYRSRKNSFTL
>BQ11500 phage related protein
MSTIFEIKQKLLSQAGAIAEMLLPQGRRRGNDWIVGNTQGEAGQSLSVCL
SGSKAGLWYDFAEGSGGDLLDLWCAVKGISLSQALEEARTFLNLSRPKPF
MAPHRSYRRPPVPKGDTPQNLVKTYLNKERCIPLDILKRYRIGEDGEKII
FPFYKPDGTLALVKERLAQAGAKAKPTASQCEAILFGWQALASMNQMPVS
TNHAPSPTNQAFASTDQVPVSTNHAPSSTNQAVASTDQVPVSTNHAPSST
NQAFASTDQVPISTNHAPSSTDQAFASTEQMPVSTNHAPSSTNQAFASTD
QVPVSTNHAPSSTDQAFASTDQMPISTNHAPSSTDQAFASTDQVPISTDH
ALFPTNQTPVSTNRTIVITEGEIDALSLAAYGYPAVSVPFGGGSGGKHNW
IENEFDHLESFETIFLATDMDKPGEEAARAIANRLGLHRCHRVRLPRKDA
NDCLTAGVDAATIAAAFSSAKSFAPEGLRRASEYKDQVIGLFWPEPEQHV
GYTVPYPKLNGKLYFRPAELTLWSGASGAGKSQLLSDCIPHWIAQKSRLC
LASLEMKGEQSLRRLTKQTGGLEQPKREMIERILDFLDDGLILYEHVGKS
SVDTLLNVFDYCRARYGCDQFIIDSLMRLGIASDDYTGQEQAVYKMVDWA
VLNAVHIHLVAHARKGGLDKDVPGTEDIKGASEIGANAFNIITIWRNRSL
EDKICATSLMEEKADLAKRPGVIMNIAKQRSGDFEGKIGLWFDPQTYRYR
CSCEHTLTPRRYLERPNKKNQEDKREYAPMATPTMK
>BQ04210 hypothetical protein
MNSQLTSLFPEPSQNCNLCPRLHKFIADWRIKEPSWHNAPVRPFFPYKGA
ATTRLLIIGLAPGLRGANRTGRPFTGDYAGQLLYSTLKKFGFAQGIFEER
ADDNLELIDTAIVNSVRCVPPENKPTSAEINTCRYFFSPLLTNLPKLKAV
ITLGTIAHHSTIHALNAKISTHPFEHGGVNNIGRLRIFSSYHCSRYNTNT
GRLTDAMFHQIFQAAKTYLDQC
>BQ06360 hypothetical protein
MAVININEVITHLLPGQTIAGLDLGKKTIGIAVSDRGLTFSNPRSVLQRK
KLTVDARTLIQIFDRENVGVVIIGLPLNMNGSSGPRAQATRTFVNNMEAY
TEIPFVFWDERLSTIAAERSLLEMDVSRAKRATRIDSAAAAFILQGALNR
IQNLHYMEG
>BQ06760 ATP-dependent RNA helicase
MIPPLNSFDDLGLSEKVIKAVKSAGYTAPTPIQSGTIPYVLQRKDVLGIA
QTGTGKTASFVLPMLTLLEKGRARARMPRTLILEPTRELAAQVEENFDKY
GINHRLNVALLIGGVSFEHQDRKLERGADVLIATPGRLLDHFERGKLLLM
GVEILVIDEADRMLDMGFIPDIERICKLTPFTRQTLFFSATMAPEITKLT
KQFLHFPVTVEVTKASSTATTITQQLVKSGNKSWDKRAVLRELIHNEGDE
LKNAIIFCNRKRDISELFRSLVRHNFSVGALHGDMDQYSRMSTLADFKDN
KLTLLVASDVAARGLDIPAVSHVFNYDVPTHAEDYIHRIGRTGRANRSGK
AFTIVTKADQKYISAIEEMSNEKIEWLNGDLSTLTTDDQTDDILGKRQSP
KLSKKISQKGRAIHTKKPLKDDKVGYIKTTNNNANPPEQHHHRKNKSYIP
PGFGDDIPAFMLIKMRT
>BQ02480 hypothetical protein
MRVVGGKFAGRVLFTPVGQSIRPTSDRTRESLFNILASREEKFWTNKRIL
DLFAGTGALGIEALSRGAKAAVFVENSVEGRGLLQKNIEAFELQSIGRIL
RRDAKKLGKIGTMRPFDVIFADPPYGQCLGECAFVEALRGEWAKANTLFV
LEEKKDAIIHLPDIFYLDDERFYGETAIRLYKLRS
>BQ07960 ATPase, aaa family
MSKDFFTSSFDLQVNKKRPLPERMRPRSLKDVTGQNHLLGEKGLLSRMVV
AGSIGSMIFWGPPGTGKTTVARLLALEKEFAFEQVSAIFTGVSELKKIFE
VAQARFMSGCKMLLFVDEIHRFNRAQQDSFLPFMEDGTVILIGATTENPS
FELNAALLSRARVLTFLPHDNESLSMLLKRAEKVEGKILPLDDDARDVLI
GMSDGDARAALTLAEEVWSVAQPGEIFDAGTLQKIIQRRAPIYDKGRDGH
YNLISALHKSVRGSDPDAALYYLARMFDAGEDPLYIGRRLVRMAVEDVGL
ADPQALVICNAAKDAYDYLGSPEGELALAQACLYVATAPKSNATYLAYKA
AMHSARKNGSFPPPRHILNAPTKFMKEEGYGHGYRYDHDEPDAFSGQEYF
PEQLGHQIYYQPRERGFEREIAKRLEWWKQLRKKRGNQK
>BQ04050 DNA polymerase, bacteriophage type
MLNQSQYSISYEELLSFYKESGVDAVLSDVPIDRFSQASSSTQELKKVID
TPHHQSVSPTIKQHSYPLPHSSTIQREPSAIEIAKSANTLDELKSALLVF
NGCSLKLTAKSTCFSDGTAGSPLMIIGEAPGREEDIQGIPFVGKAGMLLN
KILASIGLTRKNVYIANTIPWRPPGNRTPTPREVALCRPFIERQIHLANP
RILIALGGVAMQFLTGSQNGIIRTRGKWCTYESEDNIKIPVMPTFHPAYL
LRTPSQKKLTWRDFLEVKNRLNNLL
>BQ06450 hypothetical protein
MVVIILIVVAVYIQYTQKHPQKASFISKVPIKGNALVIDGDSIMVSSVMI
RLAGIDAPELHQFCGKKKTRYPCGLEAKKYLEQLIKNQPVTCHLYKKDKY
HRILATCKTKQVSNINATIVQNGWAISYYDYPKEEQEAKKKKKGIWQSNF
QYPRKWRKAHPRTE
>BQ07360 hypothetical protein
MNERETQLPLDFSYNPVFQFDDLVVTESNRMAFQLIDHWPNWILPIAVLV
GKEGSGKTHFSSIWAQKTDALRLHRNEIDQAIAIGSSGKSFLIEDIDAGE
ISETGLFHLINNVKQANLDTRQATLLITARTVPSAWNLKLNDLKSRLNSV
MLVKINQPDDALLTAVAFKLFSDRQIIVHPDTVYYLVSRCERSLFSLKHV
IDSVDRLALQRKSKITRAVIGEVLNMQIQ
>BQ13060 hypothetical protein
MKNENIKNFSIIKLLCTRVLMWCIIFFERIWIRLLPFFLVLSLFCSLSWL
GIFGILGYWPHLLLLGLMLFSVVGSLFFLVSFRFPTVGEVNRCLEQANNL
KNQPLSVQTDHLCSENDEGFRGVIWREHQRRMAKQLYHLKTGFAYPNSAA
CDPLALRSLCVLLCVCAFSFSFGSLGGRLADAFDLRPFIDETSMRIDVWV
TPPAYTGVAPIYLTQGETTHFAVPEGSKMVVRVVNGAGVTVKAFSEEDAH
EILFSKKSEKTALNDPIVHFETYLERSTGLFVSSRHKQQQWHLQMIKDQH
PTIHWLEKPGRILTGSLEFQYELDDDYGVTKAFVEIEPFLDQHKSADSLY
KAPEIQLLLPRDGRGKMRMVQDVSGHPWAGSEVKITLVTEDGARQQGRSK
TFVMTLPQRVFSNPIARAVIELRRLLALDASKKERVLDMLSTLLVRPEEG
LQNAIHFLVLKSAWTRLSMAETEGDLRNVADYLWQIALSIEGNQLESAQK
NLKQAQAALRDALRYGVPTKEIERLMANLRQAMDDYVHTLAEKAQDKSNP
SLPNLSENTLQKKLNLIEEMAKMGSSFAAEQLLAEVEQILDHLQVRKGNQ
GAEQSKNQFAQMKEKMDQLGDLMRRQQEILNETHQLEMEQRFGENVPEKQ
SKSLKKRQTELQSELSTLEKELSAQKVEQSDKLKKAEEKMNSAEAALDHG
DYQISIQNQSDALEALRQGAQNVLEKMREILKEAGDNKNAVSSREDPLGR
PLSSKIDQGQEGIVPQKSDQMHARQILEEIRKRLSRGHIPEVEKNYLEKL
LHFN
>BQ10680 hypothetical protein
MKKNQPAPSAPLSVKELKKRYEQPATRTPFPETLSARISPKDKRQPSPKL
EELKKRYEHPPTETSSSESLSATVAPQRPLRMKEKLAKMEQTRETADAKI
VPPQRPPRMKDKLAQMEQARKTADAKIVPPQRPPRMKDKLAQMEQAREIG
DATAAPPKPPRMKDKLAKIEQAREIGDATAAPPKPPRMKDKLAKIEQARE
TADAMAAPPKPPRMKDKLAQMEQARKTADAIAAPPKPPRMKARGQSNIAA
ESETLYATAAPQKPLHMRKTLVNTMEQKLLIDAYQEEIRYWCGMVYGDRL
ILDERMEEVQKNPALGEQLSREVAENPQSIAQFAGKKMLGLKTKARREAE
ENFSSLCATLEGYVYTVKYSQETTMHVPHAEQSHHEEPTQRGQRAENLRK
PLHPEKEMAPLSNKEIAHKIQKDPSVQYAQAEVCYWCKIAYGDPSILQER
IEEIQKIPGMGEELSWQVANHPTFFHKLAGRQMLGIKNQTRKKAEEGLST
LCSAIENYADIVKQVRDNIVQTHQAQQNCQEQSVELAQDLQKQQALSKQP
KLPEHSAVTARHEGVEASRQAQQQSPDVRPRKVGAAKAMAFAS
>BQ13150 hypothetical protein
MAQKKAHEVDHFLTHFARSFPIVLIYGPDRGLVCERVQRFVKLTQIAVED
PFSTVRLDAAEIDKDPARLVDEARTLSLFGGDRLIWVSNGAHQKNFLAVL
KILIKEPPEKSFILIEAGDLKKGTGLRNIIESASIAMALPCFADDIRALD
TLVNEVLDHFKMTISLDARKWLLHHLGGDHLVSRGELEKLCLYALEKTHI
ALEDVKAVVSDVSALSQDEVIDAVLLGDIAGFEAHFSRHATLQNALFFIL
NTAQRHFQQLQLLRYQIDVEGKSAFTVISQAQPPIFFQRKKTIEHALNYW
GMEQISYAMERLQGAVLESRKNPLLGEAIIRQALLALAIIARRQMTALNI
ELSL
>BQ06460 hypothetical protein
MKKQQCNQIIKLEKKIYSCRVCIKHPHYLPPLPHEPRPVVYLSDTASIAI
AGQAPGLRVHESSIPFNDCSGERLRNWLNVTSDEFYNRSLFAIVPMGFCF
PGYDKNKSDLPPRRECSEIWHEKVFQAMPQIKLVLAIGSYAQKWHIAELK
HKTVSATVSDWKNILSIRQPRGYNVMPLPHPSWRNTAWLQKNPWFNDELI
VYLRSLVRKFL
>BQ00250 addA, ATP-dependent nuclease subunit A
MTPFSIPEAALDAQATATHPKTNVWVSANAGSGKTHVLSERVIRLLLNGT
SPARILCLTYTKAAAAVMQSRIFRTLSSWNELDDTQLQTILSRLENKPIN
AQKLIYARQLFARALETPGGLKIQTIHAFCESLLHQFMLEANIAGHFELL
DDISRKKLLQESRRQLLAHHDAQSALKQLLKVINEHTFNQLLYEATEKQH
ELSDFLSSLLSENGEERLRALFHLAPDETNQRLLEKIQQTARLPLYILTH
CKTHGNQHLKDMIAKFSQLAETCDETNIIKIISNIYFRMTGEPRNFSRLS
CTKSDETWPFIQQMIKEKQSKLSVLLEKYQCLKIATLNMVAFRLCTLYLK
IYANLKKANGFLDFDDLIERTLHLLQRKGASQWVHYKLDSGLDHILLDEA
QDTNPEQWKIIQLLAQEFFTGHSQCTNIRTLFAVGDEKQSIYSFQGAAPE
NFAANGRIIQKKVQQVNQKFEKIQLNYSFRSTADVLKSVDLVFETPENYK
GLSAENTKTVHEAIRVHSPGDVILWDAISKETNEFPDDWHVTVDHLDTPE
VRLAEKIAETVANWLHNEEMLPAKGRLMRASDIMILVRKRDQFVLALSRA
LKLHNIPVAGADRLQLTNHISVRDLMALARFVLQPQDDLSLACVLKSPLF
ALTEDELYQLAAHRTGSLWQSLCMHALSHASFKDAFENLNHYRTLVDKIP
VFEFYSYILNIDKGRQKILARLGSEANDVLDAFMDYTLTIQKTGLPGLQA
FLETLSESEPEIKREFHQNHEEVRIMTVHAAKGLEAAVVFLVDPGTPIWH
PQHASHLLKVPFFNTQLSEQQNFIWHPNAQFNTKLSEKALSRLKERAEEE
YKRLLYVGMTRAEDRLFICGYSGKRTFPRTWLQLVKKALTPHAIPIKGPA
EDIAAWRYCITPSSSIPINQEVSCAESQTFPPLPDFFFHKVPAEPALPKP
LRPSVASLSIEADTEFAPNLKQFSISPVLGKTKTNRAFSIEYGNLIHLLL
QYLPDCIPQKRRDYAQHYLNTKASHWNESQKKDALRHIWQILDHSYLKPL
FSEGARAEVSLMGIIKIRGKEQAISGQVDRLYITQNKIIFADFKTGIPPE
NEAAIAPRDLLQMALYRKLLQAIHPTKNVQALLIYTKEAKIFKLPSEKLD
ALLDEIA
>BQ03720 ccrM, Adenine DNA methyltransferase protein
MSVIQLQKDFIRTSSQTSWRNKILKGDCVAVLEKLPKHSVDVIFADPPYN
LQLDGALYRPDHSLVDAVDDAWDQFESFAAYDAFTRAWLLACRRVLKPHG
TLWVIGSYHNIFRVGTALQDLGFWMLNDIIWRKNNPMPNFRGRRFQNAHE
TLIWAVRDQKDKKYTFNYDALKAGNEDVQMRSDWLFPLCTGAERLKDEAG
RKLHPTQKPQTLLTRIIMASSKPGDIILDPFFGSGTTGAVAKLLGRDFVG
IEREQQYIDAAYERIAAVEPLNKPELAILDRKKAEPRVAFNSLLEAGLLC
PGEVLYDRKKRVSAIVRADGTLMYSGEAGSIHAMGRKAQDSQSCNGWTFW
YYEENGRLKSIDGLRMIIRSRMLKTGIS
>BQ01110 dnaA, Chromosomal replication initiator protein D
MVDKLNSKASSFKRVSVDILSAEKIIKSKMTNIGGPVVENASIEHPVISE
EEGAAAFARVMAQLKAQVGIEAYTSWFGRLKLAEYSRNLVKLSVPTAFLR
SWINNHYGSLLTNLWKQENSAILRVEVIVRGMKRVSKGVVCRTSAAPVVL
EGQTASSFVESYTEPSVKDIEAGVFGSPLDSRYTFESFVEGSSNRVALAA
ARSIAEGHKSALRFNPLFIHASVGLGKTHLLQAVAAAALKRLMPARVIYL
TAEYFMWRFATAIRDNAALSFKEQLRDIDLLIIDDMQFLQGKSIQNEFCH
LLNMLLDSAKQVVVAADRPPAELESLDLRVRSRLQGGVALEIEVPDYEMR
LKMLRQRLKVVQQDDNMVVISDEVLQYIAKTVLGSGRDIEGAFNQLLFRQ
SFESDLSLERIDELLGHLTRSGESKRIRIEEIQRAVARHYNVSKQDLLSN
RRTRTVVKPRQVAMYLAKMLTPRSLPEIGRRFGGRDHTTVLHAVRKIEDL
VCDDQTLAKELELLKRLIGEQAA
>BQ04460 dnaB, Replicative DNA helicase
MEETSVVNFSSSQKEDIPSFRQLPHNIEAEQALLGALLINNDALDCVSDF
LKPEHFFEPLHQKIYDVLSRLIEKGKLANPVIIKPFIPAEEKIGDITVFN
YVIRLAKEAVTIINAKDYGQVIYDFFIRRSLINLGNQVVNTAFDAPIEVT
PAQQIETVEQKLFELAEKGKYGKGFENFDEAVKKAVDMATAAKKRSSRLS
GIATHIKTLDEKMGGLQPSDLIILAGRPGMGKTSLATNIAFNIANACKRD
AKTKDSSSEHEGGIVGFFSLEMSSEQLATRIISEQIELSSSDIRRGNISD
EQFLKIIRAMNGLQKAPLYIDQTGGISIAQLAARARRLKRQHGLDVLIID
YIQLMTSNSKRSSENRVQEITEITMGLKALAKELNIPIIALSQLSRQVEN
RTDKRPQLSDLRESGSIEQDADIVLFVYREEYYFKNEQPKEGTPEHMKWQ
DEMDKIMGKAEIIIAKQRHGPTGTIHLAFQSDFTRFSDLADSQYLPEQYG
>BQ06100 dnaC, DNA polymerase III, delta prime subunit
MNDINFLRQYNDIDTVLSPSQNNIIFGHEAARHFLAQMRQEGRLHHALIF
EGEHGIGKATLAFHLAWNILSSQKGDFLQPESNSITWRQITQGSHPCLLH
ISRRFDVKTQKFKTGILIDDIRDIMHFLHKTSQDNGWRIVIIDPADDMNR
SAANAILKTLEEPPAKTLFIIITHSSGKLLPTIRSRCQQISLRPLHDDEM
KKVITHVFFNQNRLNEETIKMIVQRSKGSPRKAALLIHHGGLEIVKNIDT
LLEQSVCNPAIVHTLAQTLSSLSSVIQFQQFCNEILDKIQKKAIMLAEKG
NLALSKKYAQIWQEIHQEVEEMQSFNLDKKQFIINLLFRVHKIIHESKIF
P
>BQ07620 dnaE, DNA polymerase III alpha subunit
MSEDRSKIRDDKNSPPRFIHLRVHSAYSLLEGALKIPQIIQHAISDAMPA
VAITDTNNLFGALEFSQHCFSHGIQPIIGCQLTIDFGDGNDNPRFVKWRH
PFDFCSIVLLAASKIGYAHLVRLVSRAYLDKCDTDPPHIKADWLLSQSEG
IIALTGGRGGPINFCLAEDKKARAVERLIYLKKVFNDRLYVELQRHGSFD
RKVETALIELAYAHGIPLVATNEAFFLNRKGYEAHDALMAVAEGQIVSNP
DRKRVTPDHYLKPQDEMVALFSDLPEALENSVEIALRCHTATPIRKPILP
RFIEQSVDSNFTLEEEDSELLNQAKDGLKRRLETIGLAEGYTIADYQKRL
DYEISVITRMQFSGYFLIVSDFIKWAKVHDIPVGPGRGSGAGSLVAYALT
ITDVDPLRFSLLFERFLNPDRISMPDFDIDFCQERREEVIHYVQKRYGRD
QVAQIITFGKLQARAVLRDVGRVLEVPYRQVDYLTKLVPAAPGNQVELAD
AIKDEPKFEEEKKKDPAIGRTLDIALQLEGLYRHASTHAAGIVIGDRPLS
ELVPLYRDPRSNMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKMAVDFVA
RKGIKIDLSHIPLNDEATYAMMARGETVGVFQVESSGMRKALIGMRPDRI
EDIIALVALYRPGPMENIPIYNARKHGEEEIASIHPKIDHLIKETQGVIV
YQEQVMQIAQVLAGYSLGEADLLRRAMGKKIHEEMQKQRTRFVNGAVAGG
VDKEQANIIFDLLAKFADYGFNKSHAAAYAIISYQTAYMKAHHSVEFLAA
SMSYDMTNTEKLNDFRREALRLGIEVIAPCVQTSHRLFEVGKNCIYYSLA
AIKGVGEAVVDHIVACRGNKVFKDLKDFCERIDPRIVNKRAMESLVCAGA
FDCFNIAREVLLASLGTLHARALRIFDNNFSGQVDMFGIAGGLKEPLILS
QASPWSPAEKLYREFQVIGFYFSAHPLDEYQAILAKKRIQTWVNFANAVK
GGATVARLAGTVVAKQVRKTKSGKKMGIIHFSDTSGQYETILFSEMLAAY
EDMLEPGKSFIITVSAENRSEGVSLRLETAQSLENEAAQHHKMMRLFIKT
VDMLPQIEQNLNPNGNGEVGLILIQEDGLREVEITLPKRYKVDSSVVSAM
KSIHGVVDVELT
>BQ09170 dnaG, DNA primase
MRFPSDFLDEIRTRLPISTVIGQRVVFDPQKSKPSRGDFWCCCPFHGEKT
PSFHCDDHKGRYYCFGCGVSGDIFTFLCELDGLRFSESVERLADFAGMKL
PVSDPQSHKRQMEKADLYDVMKIAMDFFQYSLHDKGGAQARRYLDERGVT
PKLAERFRIGFAPIRRTALKEALSARGISIKQMEDCGLLKVNEDGTTSYD
RFRNRIMFPIEDLRGRVVAFGGRALEKDTQAKYLNSSETVLFHKGNMLYN
AAAARKNSRLVGDKKNHSLLVVEGYMDVITLTKAGFERVVAPLGTALTEA
QIALLWQIGSDPIFCFDGDEAGLKAAFRVAERVLPLLKVGVSVRFVLLPQ
GKDPDEIICAGGAQLFASFLQKSISLIELLWWRATYGKDFETPEARAALE
KQLKQQIFTINDADIRRYYFQDIKKRLFDFFRPFFLKKKDAGQYDQNPKN
RIFKDQSFSMLANSNIIRDSSHSVPLREAVILLILAYYPELWYENFEVLA
ALELQNTQLVSLHQSMLEVLGSQQLHNKETMIAFLEERGQKTLLERMKNL
VQNVGMRTVFAGAPIEDARAVLKQAIYLHLQEYHLHKRLQDIEEQLVENP
NNEIFNLLREIKIELEQTQATEALIEGFGSGFGEEIDENKQD
>BQ01120 dnaN, DNA polymerase III, beta chain
MHVTVDRNQLLKSLGRVHRVVERRNTVPILSNVLIDADKNGVQLKATDLD
LEVTESFMANVKQAGAITVPAHLLYDIVRKLLDGSEIVLSVDMNQASTMS
VVSGCAHFQLQCLPKVDFPESLPGQFGYRFSLSASSLKHLLDCTQFAIST
EETRYYLNGIYFHVVDDGVLKLRLVATDGHRLAQVDMEAPSGVKDMPGII
IPRKAVGELQKLLSEEINDNVCVELSETKIRFSVGSVVFTSKLIDGTFPE
YQRVIPLGNDKKLIVNKQNFSSAVDRVSTISSDRGRAVKLTIEQGQLKLV
VHNPDSGSAEDQLAATYTSDPLEIGFNSRYLLDIAGQLSGDEMVFMLAEA
GAPALIRDNDDANALYVLMPIRV
>BQ00050 dnaQ, DNA polymerase III epsilon chain
MREIIFDTETTGLDKEKDRIIEIGCVEMIDRYLTGKRFHVYLNPQGVVIS
DEAVAIHGLTNERLKNEKSFSDIADELLEFISGATMVAHNASFDIGFLNA
ELGRVNKPLISVDNILDTLAMARRKFPMGPNSLDVLCKRFGIDNSHRVFH
GALLDAEILADVYIELIGGKQGVLGFENSKSVEQDSQNDKNALLAVKVRP
QPLSPRLSAQEKIMHADFIKKIGEKALWNFFKIPQ
>BQ02200 dnaX, DNA polymerase III subunit tau
MKNMPVETTYRVLARKYRPQNFSDLIGQETMVRTLTNAFETGRIAQAWML
TGIRGVGKTTTARILARALNYKTKDIDQPTTVLNTLGEHCTQIIEGRHID
VIEMDAASHTGIDDIREIIEQIRYRPVSARYKVYIIDEVHMLSTQAFNGL
LKTLEEPPPHVKFIFATTEIRKVPITILSRCQRFDLRRIETAVLSAHLCQ
IAKHENVKVEDQALSMIARAAEGSARDALSIFDQAIAYSNGNISAVAVRA
LLGLVDQARIIDLFEFIMKGDIVNALHELRSQYDAGADPLTILTELADFN
HLVTRLRFTPEIAEDLSLTEVEHSRSLDFSKKLSVPVLSRNWQMLLKGLQ
EVSETTRPLQAAEMLLIRLAYTADLPTLDEALKKLTQEKTSLTIVENSSH
QESTSVGNTTKIAAVNAHSFPRVSNASLNQPNLKTSFENQLNRSLQSEAS
LKVEIPESTNSPGIPKILETAQSVNLAENSANLPHLSTQITEEIFGPKTI
IIDSLHDIIKLAEQYNEIPFKLLVKEFVHPVSFEPGHIILRLAENAPRSL
ARDIKKMLSQWTEKRWTITFVNEGGGPTLQEESMAVQKTLFSNAEADPDI
AKILNHFPEAKIVDIRLNKQENDLDLLPNTFKNESDINDE
>BQ06410 dprA, DNA processing chain A
MGKKARLVLKTGINKGILLTDRQRLSWLRLLRSENIGAVSFRNLIDHYKT
AENALAALPELSRKGGLSKSLRIATLEDAEREMQEAERLGIRFVGIGEPD
YPAFLKVIEASPPLIAIKGNVSALQKPSVGVVGSRNASAAGKKLAAQFAH
FLGEAGFTIISGLARGIDSIAHQASLRTGTVAVMAGGVDHIYPPENKKLH
EDIITHGGAIISEMPISWKPRAIDFPRRNRIIAGLSLGLLVVEAALRSGS
LITAHQAAEMGRLIFALPGSPLDPRSVGTNNLIKDGALLTTHPSDIIETL
TPLIPTAINSQLNFFEESASPQIKKESFSLSNRETNSSSSIGDDSERAAL
LSALSTTPIDLDTLSTHSGVPLQNLYLLLVELELAGKLIRHSGGYVSLSS
LNLLQEPRHY
>BQ07850 gyrA, DNA gyrase subunit a
MTDFNPLPERDVLTGIEPISIIDEMQRSYLDYAMSVIVSRALPDVRDGLK
PVHRRILHAMNEMGLAFNKPYRKSAGVVGEVMGKFHPHGDASIYDALVRM
AQDFSLRNPLIDGQGNFGSVDGDPPAAMRYTECRLEKVSEELLADIDKDT
VDFQDNYDGRDREPVVLPARFPNLLVNGSGGIAVGMATNIPPHNLGEVVD
ACIALIDDPNIALDKIIEIIPGPDFPTGGIILGHSGIRSAYETGRGSIIM
RAKVDIEEMHNGRQAIIVSEIPYQVNKATMIEKMAELVRDKRIEGISDLR
DESDRDGYRVVIELKKDVIAEVVLNQLYRYTLLQTSFGCNMVALNGGKPE
QMTLLDMLRAFVSFREEVVSRRTKYLLRKARERAHVLVGLALAVANIDEI
IALIRKASDPQIARSQLMERRWLAADVASLIKLIDDPRHIIYGDNTYNLS
EEQARAILELRLQRLTALGRDEIADELNKIGVDIADYLHILASRSRIMSI
VKDELNVLREAFATPRRTIFGFGSAEMDCEDLIAPEDMVVTVSHSGYIKR
VPLNTYRAQRRGGKGRSGMSTKDEDFVTHLFVVNTHTPVLFFSTRGIVYK
EKVWRLPIGTPQSRGRALINMLPLQQGERITTIMPLPEDEASWSALDVMF
ATTRGTVRRNKLSDFVQVNRNGKIAMKLDEEDEILSVETCTEHDDVVLTT
ANGQCIRFPVVEVRIFAGRNSVGVRGINLTNGDKVISMTLLEHVEATSVE
RSAYIKRVIHERRAAGADAEDILVLDENDVGTETELTDERYAELNAREQM
LLTLSEFGYGKRSSSYEFRISGRGGKGIRATDPSKTAEIGKLVAAFPVKA
QDQIMLVSDGGQLIRVPVDGIRIGGRSTKGVKIFNTAEGKKVVSVERISE
SEDDVSQLDDEAGKHSDTVDVSEEK
>BQ00370 gyrB, DNA gyrase subunit B
MSNEITSPINGNDYDAASIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVY
EVVDNAIDEALAGHATLVNVTLHTDGSCSVRDNGRGIPTDIHPTEGISAA
EVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSVWLQLRIKRNGKIH
EMSFTHGVADSPLKTVGDCDAENGTEIRFLPSSETFTMVEFDFETLERRL
RELAFLNSGVHILLVDQRHADVRSVELHYEGGLTEFVKYIDQSKKALLDC
PIYIASVKDGVSVDVALWWNDSYHEKVLCFTNNIPQRDGGTHLVGFRSAL
TRQINGYAESSGIAKKEKINLTGDDCREGLTAILSVKVPDPKFSSQTKDK
LVSSEVRPIVENLVNEGLSAWLEEHPSEAKIVTSKVVEAATAREAARKAR
ELTRRKGALDITSLPGKLADCQERDPAKSEIFIVEGDSAGGSAKSGRSRQ
NQAILPLRGKILNVERARFDRMLSSDMIGTLITALGTSIGKDEFSPDKLR
YHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLYIAQPPLYKVAR
GKSFQYIKNEAAFEEFLIDTGLEETTLELSTGEIRAGADLRQLAEDARML
RQLLNGLHTRYNRNIIEQAAIVGAFNPQAFATPERAQKTADNIASRLDLI
ADDMERGWSGQCTSDGSLWFERILRGVKDVITLDARLINSADARQIDRVS
QNLMEIYSSPPLLHRKDKSEQIFGPMNLLESIFTNGKRGITLQRYKGLGE
MNAEQLWETTLNPDARALLQVKINDATDADLLFSRLMGDEVEPRRAFIKD
NALSVANLDI
>BQ05070 hupB, DNA-binding protein
MNKSELVSSVAEKAGVSKAQAGSVIDAFIASVTEALASGGDVRLPGFGSF
EISHRAATKGRNPSTGVEINIPARSVPKFSAGKTLKEAVNKK
>BQ05490 ihfA, Integration host factor alpha-subunit
MTSKTVTRADLASVVCRKVGLSHTESAALVELVLNEICNSLVRGEAVKLS
SFATFQVRNKNERIGRNPKTGVEAPISPRRVVTFKAANVLKQRILNSHRA
RQKK
>BQ00130 ihfB, Integration host factor beta-subunit
MVKSELVQIIARHNPHLFQRDVENIVNAIFEEISTALANGNRVELRGFGA
FSVKSRSARNGRNPRTGETVMVEEKWIPFFKTGKDLRDRLNQ
>BQ01540 invA, Invasion-associated protein A
MDTDINLKNLPYRRCVGVVVFNHEGKVWVGRRLTKYAHADTEMSHRWQLP
QGGIDEGEEPLDAACRELYEETGIRSIKLIKEARDWFYYDFPQKLVGCTL
KNKYRGQIQKWFAFQFTGKLSEIATNPPPDDNKAEFDQWKWVDLEALPSI
VISFKKHVYRKVVSEFRGSFRCL
>BQ08760 ligA, DNA ligase
MNKDEIKNLTALEAESELEWLAKEIARHDVLYNRDDQPEISDAEYDALRR
RNAEIEALFPELIRSDSPSHKIGAPVSEKFEKSVHAQAMLSLDNAFSSED
ICEFIVRIRRFLRLPATQILEMTAEPKIDGLSLSLRYEKGRLVCAATRGD
GYIGENVTANARTISDIPKVLRGEFPDIIEVRGEVYMRRENFQALNMSQQ
EKGKFVFANPRNAAAGSLRQLDPRITASRKLHFFAYACGEVSETFAASQM
EMMKKLKEYGFFINPLTKSFKTLEEIISYYHDIEECRHSLSYDIDGIVYK
VNDLKLQMRLGFVSRSPRWAVAHKFPAEKAMALLEGIDIQVGRTGALTPV
ARLAPITIGGVVVTNASLHNEDYIKGIGHKGESIREGRDIRVGDTVIVQR
AGDVIPQIVDIIAEKRPKGASAFVFPHLCPACGSHAVREVGESVRRCTGG
LICPAQAIERIRHFVSRNAFDIEGLGKKQVEFFFHIQDEALCIHTPADIF
TLQRRQEKALVRLENMEGFGTVSVRKLYNAINMRRKVPLSRFLFALGIRH
IGEVNARRLAHAYQNYTAFETVAMAATMPYDKVGEEGNEAWLELTNIEGI
GPQVGEAIIDFYQEAHNREVLAALLREVTPLDEENVMTASSPIAGKTIVF
TGTLARMSRDEAKALAERLGAKTSGSLSKKTDLLVAGSAVGSKLAKAQGL
GVEVIDEEAWLQLIEGSYI
>BQ05840 mfd, Transcription repair coupling factor
MPILKKIVIPKNISAHMIFDGVTDGFEAFALAKLSSEIAQGKPLIYVVHD
GTKIAHLQQVLNFIEPNLPVLEFPAWDCLPYDRVSPGIAVTARRLSALAH
IANLRQNPRPAIILTTANAIIQKLPPRELIETQMIYARVGQRTSMGRLIQ
FLESNGFERVTVVRDVGEFAVRGGILDIFSPVDVEPLRLDFFGNTLETIR
VFDSETQRTINKKTEFLLHSMSEVVLTPEVISRFKSNYIRTFGVSQKNNM
LYEALSQGRRFAGMEHWLPFFYEKLDSFFDHCGNLPLVFEHLIEEVLIEH
YRLIEDYYNARKERENDKENSTSYHPIEPNLLYLTPKHVLEIAQQSGQRV
DFTPFNVPKTFGQTVIHANVKLGYNFVKERNAQEKNVFSSVVHHIASLRA
MGKKVLLACWSEGSLNRLVQVLDEHGLKKIDVAKSLQTVRATPHDCISAA
VVMIEHGFETEDFVVIAEQDILGDRFIRSPRRRKHNTNFISEIAALNSGD
IVVHIDHGIGQFVGLKTITATGILRDCLEIKYAGGDRLFLPIENIELLSR
YGSEGTDVTLDKLGGVAWQARKTRLKKHLLEMAGQLIHIAAERATRSAPA
FVPPIGPFDEFVACFPYEETEDQKDAIDAVLEDLASGKPMDRLICGDVGF
GKTEVAIRSAFVAALNGYQVAVVVPTTLLSRQHYKTFLSRFQGLPVKIAH
ASRLVKTKEFTQVKKGVSDGTIDIVVGTHALLSGAVNFLRLGLLIIDEEQ
HFGVKHKERLKELKSDIHVLTLSATPIPRTLGLALSGVRELSLITTPPID
RMAVRTFIAPFDTLVIRETLLREYYRGGQSFYVCPRISDLAFVEEYLKTH
VPELKFVVAHGQMPAGQLDNIMNAFYDGQYDVLLSTTIIESGLDIPTANT
LIVHRAEIFGLSALYQLRGRVGRSKQRAYALFTFPSGKVLTAAADRRLKV
LQSLNTLGSGFQLASHDMDIRGSGNFLGEEQSGHIKEVGFELYQKMLEEA
VAELKDGKQNEDKQWSPQISLGTTVMIPESFVPDLSLRMGLYRRLTELDD
LEQIDEFAAELIDRFGPLPLEVQHLLKVFYIKTLCRKAHVEKLDTGPKGI
IVQFRNNYFANSVALVQWIGKQGSMAKIRPNQSIIFIRDWTTLDERLAGV
VTIMIQLVEMAEQRSV
>BQ02570 mutL, DNA mismatch repair protein mutL
MIIRHLSENIINQIAAGEVIERPANVVKELVENAIDAGATRIEIVTANGG
KSFIKVSDNGCGIPADQLTLAISRHCTSKITDDVHNIYFLGFRGEALPSI
GSVAKLKLTSRTQEAENATEIIVTAGKIIGPKPAAANPGTIVEVRDLFFV
TPARLKFMKTDRAETNAISDMIKRIAIAFPHIRFSLSGLDRTSMELPATA
NSTQGQLQRITQIMGKEFAPNSIALNAKRESIRLTGFACLPSFNRSNSLH
QFAYVNRRPVRDKFLWGTIRGAYADVMARDRYPVSILFIDLPPADVDVNV
HPTKADVRFRDPGLIRGLIVGAIHEALHQIGVRPASTCSEAMLSAFQTSQ
PLGTFKSTHQTFSSQHHHLASAAASPLHKPLDATNFVNLREEAVPLMECL
DMPSGDICTANTTPSSEELHYPLGAARAQIHKNYIIAQTQDSLIIVDQHA
AHERLVYEALKDALYSKPLPSQLLLIPEIVELSEEDATCLLTHKDALQKF
GLGIESFGPGAIVVRETPSMLGEVNVQALIKDLADEAAEYDTTNNLKAMI
DCVAATMACHGSIRSGRLLRAEEMNALLRQIEATPHTGTCNHGRPTYIEL
KLADIERLFGRK
>BQ02370 mutM, Formamidopyrimidine-DNA glycosylase
MPELPEVETVRRGLEPVITGAKIISITLNRRDLRFPFPEAFSERLVGRTI
MELGRRGKYLLFHLSQNETILSHLGMSGSWRIEDDLLRKTYSAAGKFVKH
DHFLMDIQAKDGKVYHLTYNDVRRFGFMLLLDTNRIYEHPLLKKLGLEPL
SNEFSGRYLQEAFVNKKISLKGVLLDQSIIAGLGNIYVCEALWRSRLSPQ
RGAFTLALKTVCAREFADSLAQNIRNVIAEAISFGGSTLRDYIRTDGSLG
YFQHSFSVYGREGKECFQCGIPITRISQSGRSSFYCSQCQK
>BQ00930 mutS, DNA mismatch repair protein mutS
MDNKTDHKNDLNSQPVPSSAPHKERLTPMMEQYIEIKAVNSDSLLFYRMG
DFYELFFNDAIEAAQVLGITLTTRGKHLGEDIPMCGVPVHAADDYLQKLI
SSGYRVAVCEQTEDPAEAKKRGSKSIVRRDVVRLVTPGTITEEKLLDPTR
ANYLMTLARIKTSKGEEFALSWIDISTGIFRVTESHPEKLLADIMRVDPQ
EIIVADSFFHDKSHKSLFNVLDRIVSPQHVSLFDAVTAERDICSYFKLST
LEGVADYSRSELSAIAAAIRYIEKTQITHRPPLMRPERQNENATLFIDAA
TRLSLELIRTTSGQRDGSLLKAIDRTVTGGGSRLLVDRLIAPLTTPSAID
KRLDSIAFFLRNTSLAEAIQLILKGGPDMPRAVSRLALGRGGPRDIASIQ
RGFEIIHGLNQLLNNELLPQEISDVQQVFSHLPTALHFRLEQALSDDLPL
LKRDGGFIRPNYHKELDEMRALRDESRLIIAELQAQYAKETDIKTLKIKH
NNILGYFIEITNLQATALTNTPQAKARFIHRQTLANVMRFTTTELVELEG
RIAHAATHAMTLELEIFDTLVHEITEQVDFIRKAAEALAILDVSVALARL
AEEQEYCRPKIDQSLTFRITAGRHPVVEQALRKQAAEPFVANNCDLSVQK
NHQYAAIWLLTGPNMGGKSTFLRQNALITIMAQMGSFVPASSAHIGVVDR
LFSRVGASDDLARGRSTFMMEMVETATILNHASSHSLVILDEIGRGTSTF
DGLSIAWAAVEYLHEVNQCRAILATHFHEMTALTEKLDRLYNVTMKVKNW
DGDVVFLHEVMPGAADRSYGVQVAKLAGLPTAVITRATDVLHQLEQGETA
GKGNKLIDDLPLFSLKTTSLINEETNKHCMLHEALKNIYPDELSPKEALE
VLYRLKQLEKK
>BQ01900 mutT, Mutator mutT protein
MRIKSSLLLVVACALLDQNNHVLLTQRPQGKSLAGLWEFPGGKVEQGETP
EASLIRELEEELGVHVPPNNLLPLIFASHSYETFHLLMPLYLCSQYEGVA
QGREGQNLKWIFIGDLDKYPMPDADKPLVQVLKKFLL
>BQ03730 mutY, A/G-specific adenine glycosylase
MLFSFVFYIFLLLTTIMHEISSRLLSWYDQKHRHLPWRITPEEQRQGIRP
DPYRVWLSEIMLQQTTVEAVKPYFKKFLKLWPDLSSLAKASQDDIMKAWA
GLGYYSRARNLKNCAQQLVETYAGQFPQSVKALRTLPGIGDYTAAALAAI
AFNHPVAVIDSNVERVVTRLFAITSVLPKAKAEIKEKTQKITSFNRPGDF
AQAMMDLGATICTPRKPSCLLCPLQSFCKAEKMQKVESFPVKAPKKERPS
NTGIAFVVLNEKQQIYLEKRQGKKLLDGMTQIPNNIGINNENGLQNAPFT
ANWQFKGQITHVFTHFSLKLDVYYISGVQEMKCENGWWCDIHHLAEQALP
TVMKKAIALAIPNPFKLK
>BQ00740 nth, Endonuclease III
MTHKTVKLLKAREVAGILYREAEIAEIFRRFSVQRPTPKSDLIYTNIFTL
LVAVVLSAQATDASVNKVTKELFRLADQPEKMVALGEEEIARHIRTVGLW
RAKARNVYALCSFLIDQYGGQVPDNREALMALPGVGRKTANVVLNVAFGQ
PTLAVDTHILRLGNRLGLAPGKTPEIVEEKLLKIIPVRYLRYAHHWLVLH
GRYICQARKVQCRQCIIADLCKAAIKTNAVPAPLVEIQGNGAPIFF
>BQ07540 parC, Topoisomerase IV subunit a
MSDKMNLPFDKEHIEPIELRFALQERYLAYALSTITHRALPDVRDGLKPV
HRRIVHAMRLLKLNPEQSYAKCARIVGDVMGKFHPHGDASIYDALVRLAQ
SFAVRYPLVDGQGNFGNIDGDNAAAMRYTEARMTEVAALLLEGINENAID
FRLTYNEEDEEPVVLPGAFPNLLANGSSGIAVGMATSIPPHNAAELCDAA
LHLIAHPDANDEKLNQFVLGPDFPTGGILVEPKKSIEESYRIGRGFFRLR
SRWHQETGSRGSYVIIVTEIPYQVQKSRLIEKTAELLLARRLPMLEDIHD
ESAEDIRIVLVPKNRTVDPELLMESLFKLTDFEVRFPLNLNVLSLGKVPN
VLSLRESLQQWLEHRQQVLIRRSTYRLNEIDCRLEILHGYLIAYLNLDEV
IQIIREEDEPKKELINCFELTENQAEAILNMRLRSLHKLEEFEIRKEFDA
LKADKEKLQNLLASSTKQWKMISEEIRKVRKIFGPETLLGKRRTTFEEAP
RHAIDDIHQAMIEKEPVTIVISEKGWMRALRGHLSDYKALSFKEGDCLKL
AFPAFTTDKITMISTGGKFFCINANDLPGGRGHGEPIRILVDMDDEHDIL
TAFVHNVEEKLLLISSYGNGFIVPATEVIANTRKGKQVMNVKFLDKVKLC
IPVKGDHLAVIGENRKMLIFAIEQIPEMSRGKGVRLQRYKEGGVVDAKTF
NLSEGLSWQDTAERSFNRQAHDLIEWMGTRAGVGRMVPKGFPKSGKFIN
>BQ06610 parE, DNA gyrase subunit B
MSDKNKDLFSILNKAQSQINTKEKNLKPSTSSEVMTSKKDTQEDNYNALS
IRVLKGLEPVRLRPGMYIGGTDSKALHHLFAEIIDNAMDEAVAGYADLID
VSLERNGYLTVTDNGRGIPVENHPQMLDKSTLEVIMTQLHSGGKFDGKAY
QTAGGLHGVGISVVNALSDDMEVEVARERKLYRQRFSRGIPQSRLEDLGY
VYNRRGTRVRFHPDSEIFGEKAAFDPEKIYEMARSKAYLFGGVKIRWNCD
PVILEGTKNIPEKAVFHFPDGLKDYLLSSLKDEYRVTSEIFSGKTKHYND
HSSIEWAIAWHGGNPYVQSYCNTIPTREGGTHEIGLRQALLRGLKSYAEL
IGNKRAAVITSDDVMISTAAILSVFIKNPEFVGQTKDRLATIEAQRIVEN
AIRDPFDHWLTNSPQESTKLLDWVIERAEERIRRRQDREINRKTAVRKLR
LPGKLADCSQNCAAGAELFIVEGDSAGGSAKQARNRANQAILPLRGKILN
VASAAHEKMNSSQTIGDLILALGCGTRSKYREKDLRYERIIIMTDADVDG
AHIASLLITFFFQEMPDLIRQGHLYLAVPPLYRISQGGKVAYARDDTHKN
ELLKTEFTGKAKIEIGRFKGLGEMRAEQLKETTMHPQKRTLLRVSIDIAE
MQETKHTVESLMGTKSEARFRFIQENSTFASNLDI
>BQ00060 polA, DNA polymerase I
MKATDHLFLVDGSSYVFRAYYALPLLKRKKDGLPVGAVAGFCNMLWKLLC
DARNTAIGIVPTHFAVVFDYSSDTFRKQIYPQYKANRVAPPEDLIPQFSL
IRQATKAFNLPCIEKEGFEADDLIATYAQLATKVGAKTTIISSDKDFMQL
VNTHVSLYDGMKDKHIGISEVLEKWDVAPEKMVDLQALTGDPTDNVPGIP
GIGPKIAAQLLNQFGSLDLLLQRVAEVKQTKRRENIQAYSEQAKISRKLV
QLKTDVPIENDLDDLILESQDGPRLIAFLKTMEFATLTRRVAEATACDAA
VIDALDLDVEWVEPVYGCDSEVKRAERALSHDFSKNTPQVLAQKRKCQAL
SQTIKRDAYLSIFDEEILKKWLSEAKEQGFFAFDTETTSLDPLQAKLVGF
SLALQPGKAAYVPLEHFEGGGDLLGGGRIVGQIETRKALTLLKPILEDQA
VLKIGQNIKYDWLVMKQYGIVIRCFDDTMLLSYALDAGALTHNMDALSER
WLGHKPIAYKDLTHNGKKITSFAQVDLKQATLYAAEDADITLRLWQVLKP
QLVARGMTKVYERLDRPLVEVLAKMEERGILVDRQILLRLSGELAQAAFI
LEEEIYQLAGEKFNLASPKQLGGILFGKMSLPGGTRTKSGQWSTSAQTLE
ELAAEGHILPRKIIDWRQLAKLKSTYADALPSYILSKTGRIHTNYSLAIT
STGRLSSSEPNLQNIPVRTTEGRKIRTAFIAPKGHMLLSADYSQIELRIL
AHIADIIALKEAFAQGQDIHAITASQMFGVAIEGMNSDIRRRAKAINFGI
IYGISAFGLANQLGLSRQEASHYIQLYFERFPGIKDYMEMTKNFACRNGY
VETIFGRRIHYPEIKAANLQVRSFNERAAINAPIQGSAADIIRRAMIQME
NALEKEKLSAKMLLQVHDELIFEVPEDESERTMALVKKVMENATMPVLSL
SVPLEVKVMAAQNWEEAH
>BQ12280 priA, Primosomal replication factor y
MKPNVTQGVTKRKIVSVLVPLPVPHAYSYEVPSSMESKVGSFVRVLVMGR
EVCGFVVDVGEQPEKVGQSAAPVAPKKLHSLLHVFDCPPLKAEMITFLRF
VSQYTMAPFGLVARLVLSVPAALEPEAQMLGLRYCGGVVERLTPARSRVL
GLARDGEVWTRAGLAHAAGTSVSVVEGLKSLGVFEEVMVSVPTLVAMPDP
NFCPPVLEGAQSEAAQLLREGVLSSQFQVFLLDGVTGSGKTEVYFEAVAQ
ALIGGKQVLILLPEIALTQQFLDRFHERFGASAAEWHSDLPPRRRERVWR
QIAEGRVRVVAGARSALFLPFQELGLIVVDEEHDGAYKQEERIFYHARDM
AVARGSFEHFPVILSSATPSIESQANVLRGRYQRVHLPSRFKEAALPQLR
VVDMRQGGVQKGRFISSALEHALTQTLEKGEQALLFLNRRGYAPLTLCRV
CGHRFHCTNCSSWLVEHRAQGQLKCHHCGYHQPFPEVCPECGTLDHLVAC
GPGVERIAEETQMLFPQARLLILSTDLKGGIRQLRSELEAIAKGDVDIII
GTQLVAKGHHFPGLSLVGVIDADLGLANGDLRASERTFQLLSQVTGRAGR
IGLESLGLLQTYQPNHPVIQALLSRQSEDFYTHELAVRQHYHLPPYGRLA
SLIVSSEKRQAAEHYARALRQVAPREKNVSLMGPAEAQLALVRGRYRFRL
LLQGQRSFDMQGFIRAMLASAPKMPSSVRVQIDIDPQSFF
>BQ06240 radC, DNA repair protein radC
MTKKLNKKGGSQSNHFALTSSAPLNPTPEAKSEKLQRNSQVYKHYQGHRE
RLRRRYLKSKGNAIEDYEYLELLLFRTIPRANTKPIAKSLIAHFGSLADV
LGADIHRLQEVHGCGPATAIDLKIISDVAGRLVRAQLFKRDIFSSWDKVL
AYCKAVMAHETREQFRVLFLDKKNGLLADEVQQTGTIDHTPVYPREVISR
ALQLSASGLILVHNHPSGDSSPSEADITMTHRLKDAANALGITVHDHLII
GRNNYTSFKALKFI
>BQ07950 recA, recA protein
MDKTKALDAALSQIERSFGKGSIMRLGQKEQVVEIETIPTGSLSLDIALG
VGGLPKGRIVEIYGPESSGKTTLALHAIAEAQKNGGVCAFIDAEHALDPI
YARKLGVDLENLFISQPDTGEQALEITETLVRSGAVDVLVVDSVAALTPR
AEIDGEMGDALPGLQARLMSKALRKLTASIFRSNCMVIFINQIRMKIGVM
FGSPETTTGGNALKFYASVRLDIRRVGSIKDRDMIVGNQTRVKVVKNKLA
PPFKQVEFDIIYGEGISKLGELIDLGVKVGIVEKSGSWFSYNSQRLGQGR
ENAKQFLREHAEIATEIETALRQNAGLIAIELLENAGSENTESNEAI
>BQ01130 recF, DNA replication and repair protein recF
MAGHVHKVTVRQLRLVRYRNYSSFNIHFSGQHVVFTGHNGAGKTNLLEAL
SFLSPGRGLRRAAYSDVSFADSGNTGFVVFARLQCALYGEVDIGTAWDID
DNSRKVHINGVNKTGDCLTDYCHMSVLTPSMDGLFTGSSLERRRFLDRMV
LAIDPFHGRRIMDYDRAMRARNRLFSDGSEDRAWFDALEKQMAELATAIA
AARIDIIRLLNGMFAQAPVHTPFPRAFLQVDGFLETALSKASAIEVEEQF
CDRLQHNRAIDRAAGRTLEGPHRTDLQIFYADKNMAAASCSTGEQKALVT
GLVLCHARLTGIMSERAPILLLDEIVAHLDSHRRAALFDLLDDLGGQTFM
TGTDPILFDALKGRAEFFEIKDGTLLP
>BQ07630 recG, ATP-dependent DNA helicase recG
MLPDLIRPLFTSVRALPGTSPKICALLAKVLNINPAQREPTVIDLLQLMP
QSVIDRRMQPSIAFAQEGITVTLEIIVDQHHPPPIERNRLPYRVSAHDQT
GKINLVFFHAQRPWLKKQLPEGKKVIVSGKVERFNGQLSMIHPDHIAPSE
QSNQMPLIEPVYPSTAGLSAKTLRRTIQNALEYIPLLPEWIEESVKKQQN
FSSFSVALHRIHTPINPDDLSLKSAARKRLAYDELLACQLALGLVRLKTK
SLSGASRPPKGTYTKKLLKALPFQLTNGQKKAIQDIANDLASPEPMLRLL
QGDVGAGKTVVALMASAQIAENSGQSALMAPTEVLARQHFATIAPLAEKI
GLQTVLLTGREKGKLRANILKDTLSGQASIIIGTHALIQNNVAYKNLALT
IIDEQHRFGVHQRLALTAKGNKPDMLVMTATPIPRTLVLTAFGDMDISQI
TEKPTGRQPITTAILPLQRIHELLERIAIALEKGEKLYWICPLVEESTTL
ELTSIENRFAILREQFGERVGVIHGKMSTDEKEAAMTSFKCGNICILVAT
TVIEVGVDIPDASIIVIEHAEHFGLSQLHQLRGRVGRGEKKSSCILLYKN
PLTKTAAKRLNIIRNTEDGFKIAEEDWRLRGEGELLGTRQSGMPEFHIAN
LAVHSDLLSIARRDARLFLQHDANFSSKRGKALRLLLDLFRRDDAIRLLQ
AG
>BQ06620 recJ, Single-stranded-DNA-specific exonuclease
MQRFHYFLNVQSSACGQAWLDALDLKGINNARAISQKFGFPDALARVLSA
RDVDESEAVAFINPTLRTLMPDPESFMDMQCAAERIVKAILNQEKVAVFG
DYDVDGACSSALIARFLRYFEIEVKIYIPDRIIEGYGPNEQAMRMLVQKG
AHLIITVDCGANSPDAVRAARLEGADVVVLDHHQMTEVHQEAVALVNPNR
PDDFSGQGHLCAAGVVFVTLAWVNHLLRKKKFGEKLPDLLSMLDLVALAT
ICDVVPLQGVNRAFVVKGLQVARSMHNFGIAALTKVARIDEPLNSFHLGF
LLGPRINAGGRIGDQALGARLLCCEDKDEADKIAERLDRLNQERQEMEGV
QLAQAESYIDSLYQERETPMSIVIAHQEWHPGIIGILASRLKERFFCPVF
SIALKEDGSGVGSGRSIDGIDLGALVREAVMLNLLEKGGGHSMAAGITIQ
STKIEIFREWLEKKVSLMVSRLRAKKSLSIDGCLSASGANKALFDMIEKA
GPFGSGNTTPVFVLPSHRLINLCEVGKGHLRLVISNMEGKKLQGIAFRAM
GTPLGYFLSENIGEMIHVAGNLSLNYWNGTINPQLRVIDAAAVV
>BQ08770 recN, DNA repair protein recN
MLIQLSIHNIVLIETLDIHFTSGLSVLTGETGAGKSILLDALSLALGGRG
DASLVRHGATQGQVTAVFDVPVSHPARQLIRENGFDDEGDIILRRVQSSD
GRSRVFINDQVASVALMRNVGHMLVEIHGQHDDRALVDVAMHRQLLDTFG
GLEDETENLRQCYRIWREFEECLQQQRLKVENSVRETDYLRACVEELEGL
DFQVGEEDALSLRRADMLKLEKIAMDIKEADDLLSGPKSPIPVLSHLVRR
LERKIPEAQAVIEPVVKSIDDALHALATAQEGIETAMRTLDFEPGELERI
EERLFALRDFARKYHVSADQLTQLRDKMDAELTAFEEAQSTLMRFEEEER
EAQKNYDTLAKALSIKRREVANHLSESVMAELPALKLEKAKFIVEMQSDA
ERRSAEGIDRVEYWVQTNPGTRAGPMLSVASGGELSRFLLALKVVLSDRG
SVPTLIFDEIDTGVGGAVAAAIGQRLQHLSENVQVLAITHAPQVASKAHS
HFLISKVESDDKGRFITGIHKMEEHERAEEIARMLAGERITEEARAAAQK
LLA
>BQ04300 recO, DNA repair protein recO
MKWKEQAVILGTRQYGETSIILEVMTRQHGRYMGIVKGGHSRRMAGLLQP
GNFVEAEWWARLDEHLGLFRLEALDLYAARLILLPEALYALQLIVFHLRL
LPERDPYPSLYDILHLFMQNFDESFVNAELLVRFEMRLLEELGFGLDLSR
CAATGRQERLFYVSPKSGRAVCEEAGRPWKEKLLTLPQFLVRRAIRPVNF
SDIINGFILTGFFLMRHVWEPRGIKQPSVRVNLIQLFERRFRM
>BQ02180 recR, Recombination protein recR
MSKHIAGPEIERLIQLLARIPGFGPRSARRAALYLIKKKETLLEPLGAAI
QAAVDKVCICSVCGNVDTTDPCSICRDPRRDDTTIIVVEDVADLWALERA
RTLAARYHVLGGRLSPLDGIGPDELNITSLVQRVVQNPIMEIILAVNATV
EGQTTAHYITDQLSNFSVKITRLAHGVPVGGELDYLDDGTLAAALQARTN
L
>BQ03620 rnhA, Ribonuclease HI
MLNQQKVVEIYTDGACSGNPGVGGWGAILRWNGHERELYSGEVQTTNNRM
ELMAAICALKVLKEACSVDLYTDSVYVRNGISLWLERWKMNNWRTTSKKT
VKNIELWKALEDVCSLHTIRWHWVKGHAGHPDNERADALARKAITEYRKN
GYFSA
>BQ03420 rnhB, Ribonuclease HII
MSHRFDNLPDLFNLPLKPNFSCELDLQKQGFFHIAGVDEVGRGPLAGPVV
TAAVILDKDHVPDGLNDSKKLSAQRRNELYCEILQSALAVSIASLCARTI
DQSDIRKATLEAMRRCVTGLAIPAHYALIDGRDIPFQLPCPATALIKGDQ
HSVSIAAASIIAKVTRDRMMKCAGQIYKNYGLEKHVGYATLAHRIALDKY
GPVVGLHRYSFAPLKGRFRDNMS
>BQ11880 ruvA, Holliday junction DNA helicase ruvA
MIGKLKGILEHVFDDHIIVDVQGVGYVVFISNRLRPSLPALGESLSLFIE
THVREEAIRLFGFVAKAEQEWFCLLQNVPGVGAKVALAILGTLSPDELAQ
AIALNDIAMISRAPGVGKKVSERIVSELKSKALPFNDNALHFTPQPHLEV
THQPTNDALSALVKLGFERDQAARALALAMNALEGETVSSALLIRHSLKL
LSPST
>BQ11870 ruvB, Holliday junction DNA helicase ruvB
MKDQRLLDSVPLPNDPDRSLRPQVLDDFIGQEAARANLKIFIEAAKARQE
ALDHVLFVGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKSGDLAALLTN
LEERDVLFIDEIHRLNPAIEEILYPAMEDYQLDLILGEGPAARSVKIDLA
KFTLVAATTRLGLLTTPLRDRFGIPIRLNFYTIEELEYIVQRNARLFSVQ
ISDDGAHEIARRARGTPRIAGRLLRRVCDFALVKRAKKIDRKVADEALSR
LEVDHLGLDPLDRRYLLLIAETFLGGPVGIETIAAALSEPRDAIEDIIEP
YLLQQGFIQRTARGRILREKAWNHLGLCAPASTISTQKCAQLLNTQDNSS
GQTTLWDEADE
>BQ11890 ruvC, Holliday junction nuclease ruvC
MAETIRIIGIDPGLRRTGWGVIDFSGNRLQFVAAGTLSSDARCDLASRLC
QLYKGLSDILHQFMPHEAAVEHVFVNKDATATLKLGQARAIALLAPAQAN
LPVFEYAPNKVKKSVIGVGHGAKEQIHMMVKVLLPRAEFDSSDAADALAL
ALCHSTHRTSASHYARITA
>BQ07860 ssb, Single-strand binding protein (ssb)
MAGSLNKVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKE
RTEWHNIVIFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQNGNDRYTT
EIVLQKYRGELQMLDGRGVTGGEQMQGANQSSGGYVNSGFGDSGVNQRNV
FGQNNSQSEESFSHKLDDDVPF
>BQ09600 tag, DNA-3-methyladenine glycosylase I
MIKEHSFNTGNGMFDEGLLKGADGKVRCAWAGTDPLYCAYHDNEWGKPVF
EDRRLFEKICLEGFQAGLSWLTILKKISHFRQAFDFFDFEKIACYDEERV
QMLMQNKSIIRHEGKIRSVVNNALKVREIITEWGSLSHYFWSFQPPQSER
YERIDFQTLLAHSITPASLRFSADLKKRGWTFVGPTICYAFMQAVGIVND
HLEGCFCR
>BQ06420 topA, DNA topoisomerase I
MNIVIVESPAKAKTINKYLGSQYKVLASFGHVRDLPAKDGSVLPDQDFSM
KWDVDSAASKRLNEIAKAVKEADSLILATDPDREGEAISWHILDILRQKK
VLKDKPVKRVVFNAITKKSVLDAMNNPRDIDTSLVDAYLARRALDYLVGF
TLSPVLWRKLPGARSAGRVQSVALRIICDRESEIEHFIKEDYWSITTDLK
TIRNEGFQARLTMFNHKKIGKLDIQSQEQADQMRHMLESAKYHTLSVEAK
HTKRNPFPPFTTSTLQQAASSKLGFSASRTMQIAQKLYEGVEINGEMAGL
ITYMRTDGVQIAPEAIDSARKVIHEFFGSDYVPEKPRFYSTKAKNTQEAH
EAIRPTDFQRIPNQVRNFLDTDQVKLYELIWKRAIASQMRSAEIERTTVE
IEAQQGENHANLRATGSVIRFDGFISVYTDQRDEENSEENEITHLPQINT
GETLTKEKVEAIQHSTEPPPRYSEASLIKKLEELGIGRPSTYASTLATLS
DRGYIIIDKRKLIPDVKGRIVTAFLENFFNRYVEYGFTADLEEKLDLISD
GKLSWKDVLRNFWDGFNASITNIQELRITNVLDVLNITLAPLIFPGREDG
NNVRSCPLCSSGQLSLKLGRYGAFVGCSNYPECKYTRQLGTDPGEEKEVM
RNDEPVMLGIDPKTGKDVSLRNGRFGPYIQVGEQKEAKRVRLPKEWQTEK
MTLDKALALISLPREIGIHPETGKIITATIGRYGPYLAHDGKYAPLLHAD
EIFDIGINRAVTVLAEKQENKTKRNRTKTAALATLGDHPDGGTVTIRNGR
YGPYVNWGKINATLPKDKDPISVKLSEALELISDKASSKKTTAKKASSKR
KET
>BQ12620 trwJ2, trwJ2 protein
MKKLIIIALVSVVLGMPNSILAYSSRGHVNPQTSLYQLQRSLQQSKAREE
SQKNKEQLKFDGNALLEALKKQLEINKQQLEEAKRLHESITNNQRTINIQ
QDSDDFFLKNPQFIYKRDKESEINQVAVFIKDIRDKENYLHNVSVSTREA
RDSINERIKYAALVDKAVSLRVFEETKNRFSQIEKMLKDIDTMADLKSIA
NLQAQIKGKLAMIQNEATKLQMVAHLRNAEQELISQLKRKRSATIFKSEN
TKMPDIQYVKAIQ
>BQ07870 uvrA, Excinuclease ABC subunit a
MAHQKYISIRGAREHNLKNLDIDLPRDKLIVITGLSGSGKSSLAFDTIYA
EGQRRYVESLSAYARQFLEMMQKPDVDRIDGLSPAISIEQKTTSRNPRST
VGTVTEIHDYMRLLFARIGVPHSPTTGLPIESQTVSQMVDQIMALSEGTR
IFIMAPLVRGRKGEYKKELMELLKKGFQRAKVDGKFYEIPDIPPLDKKYK
HDIDVVVDRIVVHNDMASRLADSIKTCLQLADGIAVVEMADQPLAQKETS
KESANKSKNETHKRLIFSEKFSCPISGFSIPEIEPRLFSFNNPFGACPTC
DGLGTKKAIGPKKIVPNENLTLESGAIAPWSKSSSPFSNQILEALGKIYG
FKLTDKWSALSDEAQQAILYGTKRKTISFDHKSDSGSHKMIQHFEGVIPN
MEKQWKETDSAWSREEIERYMSSSLCPACHGYRLKPEALAIKIHGMHIGQ
ISELSILKADDWFANIDQYLTEKQRNIAVRILKEIRERLAFLNHVGLEYL
TLSRNSGTLSGGESQRIRLASQIGSGLTGVLYILDEPSIGLHQRDNARLL
RMLHHLRDLGNTVIVVEHDEDAILTADHVVDMGPAAGVHGGKIMAQGTPQ
EIIENPSSLTGQYLSGRMAITIPAQRRKISKTKTLKIIGARGNNLKNINA
EIPLGTFTCITGVSGGGKSTLLIETLFKAASCYIMGSHHSPESYDKIEGL
EFLDKVIDINQSPIGRTPRSNPATYTGAFTPIREWFAELPESKARGYQAG
CFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCQGKRYNRETLEVK
FKGKSIADVLDMTIEKAEEFFQAVPTIHNKMKTLIKVGLGYIKVGQQATT
LSGGEAQRVKLAKELSRKTTGRTLYILDEPTTGLHFHDISKLLEVLHELV
EQGNTVAVIEHNLEVIKTADWIIDLGPEGGYRGGEIVAVGRPEDIINVPA
SYTGKFLQEILLR
>BQ09330 uvrB, Excinuclease ABC subunit b
MKNGVTATVEALSALIASDNPFFKNGALWTPHRPVRPKKSEGGIPLQLET
SFEAAGDQPQAIKTLVEGIEKDERTQVLLGVTGSGKTYTMAKIIEKTQRP
ALILAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVARSDTYI
EKESSINEQIDRMRHAATRAVLERDDVIIVASVSCIYGIGSVETYTAMTF
QIKKGDRLNQRQLLADLVAQHYHRQDINFIRGSFRVRGDTIEIFPAHLED
RAWRISLFGDEVETITEFDPLTGQKTSDLQFIKIYANSHYVTPRPTLNQA
IKSIKMELVQRLDELNAAGRLLEAQRLEQRTIFDLEMLEATGSCPGIENY
SRYLTGRKPGEPPPTLFEYIPNNALVFIDESHVTIPQICGMYRGDFRRKA
TLAEYGFRLPSCMDNRPLRFKEWDLMRPQTIAVSATPGRWEIEQSHGIFV
EQIIRPTGLIDPPTEVRPASTQVDDVVNEIRNTIQKGYRTLVTVLTKRMA
EDLTEYLHEQGIRVHYMHSDIDTLERIEILRNLRLGAFDVLIGINLLREG
LDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADTITG
SIERALQETQRRRQKQIAYNEEHHITPTSIKKNISDILNSGSKNDHPHTN
ISDFVTQNSRAGNNLAKHIQYLKKSMHEAAADLNFEEAARLRDEIKQLQK
IELATTEDPLTHHSEQSIHKPMIESSLFAKADLDHMAPSRDTGILEYRKT
KRKSHQNTLDKKINKKTKKNSSNK
>BQ04710 uvrC, Excinuclease ABC subunit c
MKKNISYGKHKTFPSKLNGLEKQHSLSKNERDNFPFLSNIPWDNANQGSD
KNQLKGAKLIQEFVKHLPHKPGVYRMFDENGNVLYIGKARNLKKRVSNYT
CEQRHNNRITRMIRATYHMEFVVTHTETEALLLEANLIKRLHPRFNVLLR
DDKSFPYIIITENHRAPALYKHRGARTRKAHYFGPFASSSAVTQTINVLQ
RAFLLRTCTDSVLENRTRPCLLYQIKRCSAPCTHEINENDYRELVRGAKA
FLSGKSQSVKNDMIQAMHKAAEDLDFEQAAVYRDRLSALSHIQSHQGINP
QTIEEADVFAIAQKGGITCIQVFFFRMRQNWGNRSYFPKADPSFSRSEIL
ASFLAQFYDDKPLPKLILLSEEIEEKTLLAEAFSLKANRKIFLSLPKQGE
RKTLVNHAYINAYEALGHKLAETATHTKLLQGIAEVFQLPQTPHRIEVYD
NSHLMGTNAVGAMIVADQMGFLKNQYRKFNIRSTDITPGDDFGMMKEVIK
RRFSRLIKEHGLPHESNSIKGEDEDCFSIWPNLILIDGGEGQINSVHTIL
SELKLDDFITVVGIAKGADRGAGHERFFIKGKTPFTLPPHDPILYFLQRL
RDEAHRFAIKTHRIKRKKATLKNPLDEIKNIGSTRKRALLHHFGSAKIVA
SASLEDLTKVTGISVTIAQKIHNHFNEK
>BQ08710 uvrD, DNA helicase II
MNNFFDHIPFFEDESPPHKHENNPGLTAHAVSTKEKTRCDTDYLEKLNPE
QQQAVINTEGPLLVLAGAGTGKTRVLTTRISHILRSGLASPKQILAVTFT
NKAALEMKMRIGELIGEIVEGMPWLGTFHSTGAKILRRHAELVDLKTNFT
ILDNDDVIRLLKQLIQAEGLDDKRWPARCFAMMIDSWKNQGLSPERISES
DAYSFGNGMGRKLYCSYQNRLKSLNACDFGDLLLHCISIFQNNPDILHDY
HSKFRYILVDEYQDTNTAQYLWLRLLAQQPKGQHVNLCCVGDDDQSIYGW
RGAKVDNILRFEKDFPPAKIIRLERNYRSTSHILKTASHLISHNQGRLGK
VLFSDQINIEEEKVKIHAAWDSQKEARAIGEEIEQAQQAGHSLNHIAILV
RASFQMREFEDWFVTLGLNYRVIGGPRFYERMEIRDALAYLRVVVQPADD
LAFERIINTPKRGLGDATLRTLYESARARDIPLFTAAEIIKTDELKPKAR
TALRSIVENFHRWQNMLQYTPHRELAEIVLDDSGYTTMWQEDRSPEAPTR
LENLKEMIRSMEQFESLHSFLEHVALIMDAENNENTDAVNIMTLHSAKGL
EFETVFLPGWEEGLFPHQRSLDENGRSGLEEERRLAYVGLTRAKKYLHIW
FVSNRRIHGLWQSTLPSRFLDELPKEHIEVVEMETSYGGYGKSHFKHHTP
FYSDYSTPGWERAQKNIEGKIAQSVFQTPSDFSINDRIFHIKFGYGYISA
VDGHKLTIVFEKAGEKQVLDNFVSKA
>BQ12770 xerC, Integrase /recombinase xerC
MPPKDDSRKGKNVFLIPADPPVLAARKNWLDNLLQTRRMATHTAQAYERD
TRQFLSFLCQHLGHKPTFHDLANLRVTDLRAYLAYRRTLNISARSLSRGM
AGLRSFFNYLSREGIVSIPASKLVRTPKYSKSLPKPLAIKSALHVVKQEN
QQENESWIIARNAAVLILLYGCGMRISEALALTPEQFSDPEKTSLFVTGK
GGKTRLVPLIKVVYETIQNYLKCCPYPLVENQPMFRGARGGPLHPAIIQR
TVRNLRSSLGLPETATPHSLRHSFATHLLSRGGDLRTIQELLGHASLSTT
QIYTHVDTDRLLEIYQKAHPRA
>BQ13260 xerD, Integrase /recombinase xerD
MKSNAVIDHFLEMMSAERGASTHTLAAYQHDLQWAQDELSLHSVSLFSAQ
KEDLIGLLSLMHILGFAASSQARRLSTLRQFYRFLYAEGMRVDDPSHDLD
APRQGRPLPKVISEDGVTKLLDLAQLEVNQADYGSKDHFRALRLQVLIEM
LYATGLRISELVSLPVQAVRGKEYSILVRGKGKKERIVLLSKKACQVLSQ
WLSLRDQRKDAASLYLFPARSETGYIARQVVARELKGLAKRAGIKSSGFS
PHVLRHAFASHLLQNGADLRAVQHLLGHSDIATTQIYTHVLEAGLYRLVN
EHHPLADEQRAQKVK
>BQ09610 xseA, Exodeoxyribonuclease large subunit
MNLFFEKTEATNVAEFSVSEIAGALKRVVEERFGYVRVRGEISGYRGAHA
SGHVYFSLKDDKARLEAVIWRGIMEKLKFPPEEGMEVIAVGKLTTYPGSS
KYQIVIEALEPTGVGALMTLLENRKKKLADEGLFDEAKKKPLPYMPRIIG
VVTSPTGAVIRDIIHRISDRFPLHILVWPVRVQGDTSGREVADALKGFNA
LPFGGLVPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYESALPVISAVGH
ETDWTLIDYVADWRAPTPTGAAERAVPVKLDLEVQVASLGARLRMGLARY
FDFHQQKLRALVRGLPTVDQLFALPRRGFDEISSRLQRALCVSCDKKRFY
FHGLNLRLSPRLLNTEKELRNTKEYTARLHRAFVRNVEKQRAQLEVASRL
LKSTSYQNILERGFVLALGPDNKLIKRLVQFPETGQINLRFFDGEMSVSA
RDHGLNRSSKSKRIKSKQDDQGTLF
>BQ03530 xseB, Exodeoxyribonuclease small subunit
MKQEIQTGDITALSFEQALKQLEVIVENLERGDVPLEQSIDIYERGEALR
KHCDRLLKAAEAKVEKIQLSEEGSPKGVEPLDSK
>BQ08290 xthA1, Exodeoxyribonuclease III
MKIATWNIAGIKARHETLYQWLQQNQPDIVCLQEIKSTDENFPCDAIESL
GYHIETHGQKSFNGVAILSKKTPDEVIRRLPGNNNDEQTRYIEAVYSTNK
GVIRVASLYLPNGNPVKSEKYSYKMEWMERLYAHAKSLLAYEEPLVLAGD
YNVIPTPLDAKNPQKWSNDALFLPQTRNAFQRIVHLGFYDAIRNVTDTPS
FSFWDFQAGAWHKNNGIRIDHLLLSPEAVDQLICAYSQTEVRGYPKSSDH
APVWIDLNFN
>BQ12410 xthA2, Exodeoxyribonuclease III
MFFRIATWNVNSIRLRLAQVFQYLDLFAADVLCLQETKCPDALFPREAFE
AAGYKHIILSGQKSYNGVAIVSRLPFKNVEKRFFCQKQDCRYISVIVEAY
GRNIRIHNFYVPAGGDVPDADVNEKFRHKLDFLEEMASIRANQEDDLASL
LVGDLNIAPLEDDVWSHQQLLKVVSHTPIETERLQALCCQGGWVDLMRLH
FPPPTKIYTWWSYRARDWALADRGRRLDHIWSSPNLAPFVANLSIFRDAR
GWNQPSDHVPVQTVFDFSR