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# Thermus thermophilus HB8, HB8

>gid:442254  TTHA0001  DNA polymerase III, beta subunit
MNITVPKKLLSDQLSLLERIVPSRSANPLYTYLGLYAEEGALILFGTNGE
VDLEVRLPAEAQSLPRVLVPAQPFFQLVRSLPGDLVALGLASEPGQGGQL
ELSSGRFRTRLSLAPAEGYPELLVPEGEDKGAFPLRTRMPSGELVKALTH
VRYAASNEEYRAIFRGVQLEFSPQGFRAVASDGYRLALYDLPLPQGFQAK
AVVPARSVDEMVRVLKGADGAEADLALGEGVLALALEGGSGVRMALRLME
GEFPDYQRVIPQEFALKVQVEGEALREAVRRVSVLSDRQNHRVDLLLEEG
RILLSAEGDYGKGQEEVPAQVEGPGMAVAYNARYLLEALAPVGDRAHLGI
SGPTSPSLIWGDGEGYRAVVVPLRV
>gid:442319  TTHA0063  primosomal protein N
MALPLPLPPMSYLPPLGQEGEEALGRRVAVPFRGEVQVGVVVGEGGRPSL
NLRHAIAYLDPAPYLRPEEILFLEEAARYLFAPLGQVLADFLPPFPPLRH
RVRLYPGADPKVLPPGLGALVDWREARGFDPKLLDLLREAGMLEEELAFR
EARGVLVPLKPAHPDPQLDRVLQVLRELGFAESQAALARAAGVGVGRVRR
LVQEGYIGTASPEEAAPPPADGVDVAPLHLPERPERVNGGRFLERVRVLK
GLLGEGDHLVLFPEVSLLERFLAHFPGATPYHGGLSGPVRERFFRRPRGL
VFATYGGLLLPFTPRSLVVVEEGSESYKLPSGSRAFVPPLAELRARLLGV
PLTYLSLVPAVEVLERKGFALPVPKPRLLLLDLRRERGFPVTGRALALLR
QVEERGRQAVVLSARKGYSALLLCQDCGFRPMCPDCALPLRYHREGKGAL
VCHQCGHREDPPLLCPRCGSPLLAPKGPGVDWIREALAERLSLPVYRYAG
DGKDDLTPLLEGRPGVVVGTTALLRGPRLPDLALVLLPLADGFLLESDFR
AAERYHRLLWALTELRPGRRPLLVLQTFTPEHPVHRALEAGEVEAYLWQE
KALREALNYPPRVRMVKLEVRHRKEERAREKAFALLEALRAEAEEGEVLG
PAPAPVPRVKGHYVFHLLLRGSTERLARLLGLLDRRQFRLDPDPFHFVGL
LED
>gid:442330  TTHA0074  DNA topoisomerase IA
MPKSAKRRASQPTGAETLVVVESPAKARSIQKMLGPGYEVRASLGHVVDL
PERSLGVDVERDFAPTYEVKKDKKPVVEELKRAAEGKRLLIATDPDREGE
AIGWHVARLLGRDPKEPLRVEFHEITPRVVRQAVEAPRPIDQNLVDAQQA
RRVLDRLLGYNLSPLLSLEFRKRALSAGRVQSVALRLVVEREEAIEAFRP
EEYWVLRGVFAVEGGEAPLVATLHEVEGKRLWTGQGEKEGRLHLASEAEA
HALAEALRKGSYRVAQVEVRERRKAPPPPFTTSTLQQAASSRLGYTAART
MRIAQRLYEGVDLPEGTVGLITYMRTDSVRVAPEAVAAAREVIGKAFGPE
YLPEAPRAYKNRREGVQDAHEAIRPTDPKRTPESVRPYLSEEEYRLYELI
WRRFLASQMRDALYEQTAVTLADLEGRYAFRASGSVLRFEGYLRAWGRDA
EEEEEPPVPAVPEGVPARLEEVLEERRFTEPPPRYTDASLVKTMEELGIG
RPSTYAPTLETLEKRGYVARKGRTLFPTPLGRQVTAYLRERFPQVVAYEF
TARMEERLDEVEEGRVPWPKVVWEFYEPFLGELAQVPKKTCPRCGRPLEL
KVSRYGQFLGCTGYPECTYTEPLERREAEPIGEACPKCGRPLLRKEGRYG
TFIACSGYPECDYTRDDGTPTGHTCPKCGGRVLEKRSRKGRPYYKCENNA
CDFLSFYPLLEEACPACGWPLVKKGEKALCLNPACPEHEPSLLPAPKEAK
KGRSRGKGKPPLAPPKDWEELVPFLPGLSPEERRAVEALARGEALARGEA
LAEEEARLARRALFKLRMRKGKARKEPVRA
>gid:442368  TTHA0109  ATP-dependent RNA helicase
MGPERQSMEFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIG
QARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQVASELT
AVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLS
RVEVAVLDEADEMLSMGFEEEVEALLSATPPSRQTLLFSATLPSWAKRLA
ERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVLSDLLYVASPDRAMV
FTRTKAETEEIAQGLLRLGHLAQALHGDLSQGERERVLGAFRQGEVRVLV
ATDVAARGLDIPQVDLVVHYRLPDRAEAYQHRSGRTGRAGRGGRVVLLYG
PRERRDVEALERAVGRRFKRVNPPTPEEVLEAKWRHLLARLARVPEKDYR
LHLDFAGRLFSEGRVEVVAALLALLLGGAPKEKSLLTGEEGWRTYKATGP
RLSLPRLVALLKGQGLEVGKIAEAEGGLYVDLRPEARPEVAGLRLEPARR
VEGLLEIPSRTRRPARA
>gid:442371  TTHA0112  endonuclease III
MGGVACPKEGPKEKKARAREVLKALKAAYPGARTELRHENPFQLLVATVL
SAQATDKSVNEATPALFARFPDAKALAEATPEEVEPYIRRIGLYRTKAKN
LVALARRLVEEYGGEVPKEKEALMRLPGVGWKTATVVLGAAFGVPGIAVD
THVARLARRLCFSEAKAPERIGKDLEALFPKEDWVFVHHALVLHGRYVCT
ARRPRCRACVLAPYCPSREA
>gid:442381  TTHA0121  competence protein DprA (SMF protein (DNA processing chain A))
MDPLALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAER
ERGRAEALGVRLLGLWEEGFPEGLRALPQPPTHLYLKGELPPEREAVALV
GTRRASPWALAFARRLARELAEAGLWVVSGLARGIDREAHLGALEAGGRT
LGVLGSALDRVYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGL
CRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDERSLGANRLIQD
GAYPVLSAEDVLSYLGMSARPKPLPGLSPEEEALYALLQEKKEALPEALA
MALGIPPERVLSLLTLLELKGLARALPGGRYGPG
>gid:442396  TTHA0135  MutT/nudix family protein
MRRKRKGQRPTRRVVSAGGVVLKGDPPEVLVVSLRGGRVVTLPKGQVEPG
ERYPETAVREVREETGVEASVLAPLGRVRYYFTVHEPEGPVTVSKEVHYF
LMRHLGGTPRPQLTEVEDAFFLPASEALERLSYPNEREMLKRALLRLRAR
AKKG
>gid:442442  TTHA0180  DNA polymerase III alpha subunit
MGRKLRFAHLHQHTQFSLLDGAAKLSDLLKWVKETTPEDPALAMTDHGNL
FGAVEFYKKATEMGIKPILGYEAYVAAESRFDRKRGKGLDGGYFHLTLLA
KDFTGYQNLVRLASRAYLEGFYEKPRIDREILREHAEGLIALSGCLGAEI
PQFILQDRLDLAEARLNEYLSIFKDRFFIEIQNHGLPEQKKVNEVLKEFA
RKYGLGMVATNDGHYVRKEDARAHEVLLAIQSKSTLDDPGRWRFPCDEFY
VKTPEEMRAMFPEEEWGDEPFDNTVEIARMCNVELPIGDKMVYRIPRFPL
PEGRTEAQYLMELTFKGLLRRYPDRITEGFYREVFRLLGKLPPHGDGEAL
AEALAQVEREAWERLMKSLPPLAGVKEWTAEAIFHRALYELSVIERMGFP
GYFLIVQDYINWARRNGVSVGPGRGSAAGSLVAYAVGITNIDPLRFGLLF
ERFLNPERVSMPDIDTDFSDRERDRVIQYVRERYGEDKVAQIGTLGSLAS
KAALKDVARVYGIPHKKAEELAKLIPVQFGKPKPLQEAIQVVPELRAEME
KDPKVREVLEVAMRLEGLNRHASVHAAGVVIAAEPLTDLVPLMRDQEGRP
VTQYDMGAVEALGLLKMDFLGLRTLTFLDEVKRIVKASQGVELDYDALPL
DDPKTFALLSRGETKGVFQLESGGMTATLRGLKPRRFEDLIAILSLYRPG
PMEHIPTYIRRHHGLEPVSYSEFPHAEKYLKPILDETYGIPVYQEQIMQI
ASAVAGYSLGEADLLRRCLAEGSLVLDAATGQRVPIEKVRPGMEVFSLGP
DYRLYRVPVLEVLESGVREVVRLRTRSGRTLVLTPDHPLLTPEGWKPLCD
LPLGTPIAVPAELPVAGHLAPPEERVTLLALLLGDGNTKLSGRRGTRPNA
FFYSKDPELLAAYRRCAEALGAKVKAYVHPTTGVVTLATLAPRPGAQDPV
KRLVVEAGMVAKAEEKRVPEEVFRYRREALALFLGRLFSTDGSVEKKRIS
YSSASLGLAQDVAHLLLRLGITSQLRSRGPRAHEVLISGREDILRFAELI
GPYLLGAKRERLAALEAEARRRLPGQGWHLRLVPPAVAYRISEAKRRSGL
SWSEAGRRVAVAGSCLSSGLNLKRPRRYLFRHRLFLLGEAFADPGLEALA
EGQVLWDPIVAVEPAGKARTFDLRVPPFANFVSEDLVVHNSMGKKKVEEM
KSHRERFVQGAKERGVPEEEANRLFDMLEAFANYGFNKCLPARARVVDWC
TGRVVRVGEIVRGEAKGVWVVSLDEARLRLVPRPVVAAFPSGKAQVYALR
TATGRVLEATANHPVYTPEGWRPLGTLAPGDYVALPRHLSYRPSLHLEGH
ELDLLGFALAEGHLRHPSGVYLYTSSEEELAAMEEALRAFPNTRIRVVWR
RGVAHVYVGRVDRRQEAGAVAFLRRMGLLGLDAKTKRLPEAVFGLPPEEV
ARFLGRLWTGDGGVDPKGRLIHYATASKELAWGVQHLLLRLGLQSRLVEK
RFSGGYKGYAVYLLGGLEAARRFAETVGPYLVGKRRQDLEALLASWEKAG
RSTRDVLPLAFLEEVRAAVAEVAQGQVADLLREAGLAEGLLCLGRGRRGL
SRATVGRLAALTGSLALLRLAEAEVYWDRVEAVEPLGEEEVFDLTVEGTH
TFVAEDVIVHNSHAAAYSLLSYQTAYVKAHYPVEFMAALLSVERHDSDKV
AEYIRDARAMGIEVLPPDVNRSGFDFLVQGRQILFGLSAVKNVGEAAAEA
ILRERERGGPYRSLGDFLKRLDEKVLNKRTLESLIKAGALDGFGERARLL
ASLEGLLKWAAENREKARSGMMGLFSEVEEPPLAEAAPLDEITRLRYEKE
ALGIYVSGHPILRYPGLRETATCTLEELPHLARDLPPRSRVLLAGMVEEV
VRKPTKSGGMMARFVLSDETGALEAVAFGRAYDQVSPRLKEDTPVLVLAE
VEREEGGVRVLAQAVWTYEELEQVPRALEVEVEASLLDDRGVAHLKSLLD
EHAGTLPLYVRVQGAFGEALLALREVRVGEEALGALEAAGFRAYLLPDRE
VLLQGGQAGEAQEAVPF
>gid:442460  TTHA0198  ribonuclease HII
MAEGPLEAPFWRKGLLVAGLDEAGRGAWAGPIVVGAVVLPPGEYPFRDSK
LLSPKARERLAEKVKEVALAFALGVAEAAEVDRLGVLKATLLAAERALLS
LPLAPEALVTDYLPLPTPLPLLSPPKADEKSPTVAAASILAKVHRDRIMD
ELDRLYPGYGFARHKGYGTQEHQEALLALGPSPVHRKRFAPVAQAPLRFP
EAP
>gid:442496  TTHA0234  transposase
MFNRGAHLGTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQV
HGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEV
AVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDEVLEAAGAFRTRPL
PEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPT
ESALGWEGVLGELWQRGLRRVLLFVTDGLPGLPEAIRRVYPQAEWQRCVV
HGVRWSLSQVRSRDRALLAEDLRRVYGAESREEALGALEEVKAAWGSRYP
GVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIRELRRGTKVRDHK
FPKEEAVYKLLYLESERQEGRWAERKLKGFSEVKEVLEKMLQERYAPRTQ
TLTQSP
>gid:442506  TTHA0244  single-stranded DNA binding protein
MARGLNRVFLIGALATRPDMRYTPAGLAILDLTLAGQDLLLSDNGGEREV
SWYHRVRLLGRQAEMWGDLLDQGQLVFVEGRLEYRQWEREGERRSELQIR
ADFLDPLDDRGKERAEDSRGQPRLRAALNQVFLMGNLTRDPELRYTPQGT
AVARLGLAVNERRQGAEERTHFVEVQAWRDLAEWAAELRKGDGLFVIGRL
VNDSWTSSSGERRFQTRVEALRLERPTRGPAQAGGSRSREVQTGGVDIDE
GLEDFPPEEELPF
>gid:442531  TTHA0264  RecF protein
MRLLLFRQRNFRNLALEAYRPPPGLSALVGANAQGKTSLLLGIHLALGGE
VPLGLADLVRFGEEEAWLHAEVETELGAYRLEHRLGPGGREVLLNGKRVS
LRTLWELPGSVLVSPLDLEAVLGPKEERRAYLDRLIARFSRRYAALLSAY
EKALRQRNALLKAGGEGLSAWDRELARYGDEIVALRRRFLRRFAPILREV
HAALAAKEAGLRLEETAGEGVLRALEASRAEERERGQTLVGPHRDDLVFL
LEGRPAHRFASRGEAKTLALALRLAEHRLLGEHHGEPPLLLVDEWGEELD
EARRRAVLAYAQALPQAILAGLEAPPGVPVCSVVRGVVLCPGA
>gid:442532  TTHA0265  conserved hypothetical protein
MLGGTRGGPVPWRLKEVIPEALKRAGGKERLRRGLVLAAWREVAGKDLAR
FTEAVALEEGVLVVHVPDPVVAHQLTYTRLALLRRYEERFPGAVREIRFQ
VGPLEAEGVEAPPPSDPGRLREAGRKALALAEKAPPELRERVARAALALF
QRQRGDPCPVCQTPSETHPCPTCRRHLEDPGVRRAAERLMRGQEAGLEGD
ALRAARHLARENLLAQMRDLYPEALRSEEFRPLLADLARRYRNLFPQEPL
PEGVRSLLKEG
>gid:442558  TTHA0291  Holliday junction DNA helicase RuvA
MIRYLRGLVLKKEAGGFVLLAGGVGFFLQAPTPFLQALEEGKEVGVHTHL
LLKEEGLSLYGFPDEENLALFELLLSVSGVGPKVALALLSALPPRLLARA
LLEGDARLLTSASGVGRRLAERIALELKGKVPPHLLAGEKVESEAAEEAV
MALAALGFKEAQARAVVLDLLAQNPKARAQDLIKEALKRLR
>gid:442600  TTHA0329  DNA-3-methyladenine glycosidase
MFEHPVLAAFYRRHGPAPFAPNPFPQRPPFRVLAESVVAQQLSTRAAARL
AERLFRLVPPTPEAFLEAPLDLLRQAGLSRAKALALKDLAAKAEEGLLDG
LDRLEDEAVVERLTRVRGVGLWTAEMFLMFGLGRPDVWPVRDLGLRRAAA
RLFGVAPEALPAFGEAFRPYRSHLAWYLWRSLSSP
>gid:442648  TTHA0372  conserved hypothetical protein
MGALRGRWAEEEALRFLLGKGYRLLWRNRRTPFGEVDLFMEKDGVYVVVE
VKQRASARFGAPLEAITPGKVRRLLQSARFLLGRDDLPVRLEAVLVHGTP
KDFRLEHLVLEL
>gid:442684  TTHA0406  RuvB, Holliday junciton DNA helicase
MEDLALRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLG
KTTLAHVIAHELGVNLRVTSGPAIEKPGDLAAILANSLEEGDILFIDEIH
RLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPGL
ITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRS
RGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLDELGLEKRDR
EILEVLILRFGGGPVGLATLATALSEDPGTLEEVHEPYLIRQGLLKRTPR
GRVATELAYRHLGYPPPVGPLLEP
>gid:442687  TTHA0409  putative modification methylase
MRSFPKAKEAFSEGEKVSFGVHRLHVGDAREVLASFPEASVHLVVTSPPY
WTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV
AVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPIIWHKHTNASLEVEGRG
VFLGKPYEPGAIIKTEIEYILMQRKPGGYRKPTQEQREKSRLPKEDFHRF
FRQIWDDIPGESTKDHPAPFPLELAERLVRMFSFVGDVVLDPFAGTGTTL
IAAARWGRRALGVELVPRYAQLAKERFAREVPGFSLEVLDGATHPRR
>gid:442810  TTHA0528  ADP-ribose pyrophosphatase
MGRVYYGGVERTYLYRGRILNLALEGRYEIVEHKPAVAVIALREGRMLFV
RQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEETGLSGDLTYLFSYF
VSPGFTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRGEV
EFSATGLVGVLYYHAFLRGR
>gid:442826  TTHA0544  conserved hypothetical protein
MGKKKGTHLTAPRQEVLGIPEPIWRELWEEVERARALYQEMQVAPSRELE
RELFGALTHLVGHVSAMWEEAEFLEEDA
>gid:442856  TTHA0574  probable DNA polymerase III epsilon subunit
MEAAFRYRMATRLARRLREAGRPLPLPALGEALGLRGPVERVVRPLLDGR
FLLEEGVGLWEWRYPFPLEGEAVVVLDLETTGLAPGLDEVIEVGLLRLEG
GRRLPFQSLVRPSRPPSPFVERLTGIPREALEEAPSLEEVLEKAYPLLAD
ATLVIHNAAFDLGFLRPALEGLGYRLENPVVDSLRLARRGLPGLRRYGLD
ALSEVLELPRRTCHRALEDVERTLAVVHEVYYMLTSGRPRTLWELGR
>gid:442907  TTHA0623  DNA repair protein RecO
MAPAYTGKVERYRLEEGIVVGRKPLPQGDLLLRLVTPRGSLEAVVRKGQR
PTGRTGRLSLFHHVRFQLYAKGEGLPTLTQAELLGRLHGLEAPRRFLLAA
FLAELAYRLASPEAAPRIYPLLVSGLRGIAKHEDPLLPLVWAGWRVAKAG
GIGPNLEGEGLRLKRGRLGEEGVYLGREGVEALKATLRLPGAQALPHLEG
APLNRLFLALKAHAEEALGPLRSAEAIGV
>gid:442938  TTHA0651  hypothetical protein
MPEDHLLERLEKLEGIVETTVRVLPPLVQDLSRRIDGLREEMQGVAARLE
ARIQQAEAKLEGQIQWVRSELEGFTLIGVALAPLSLLR
>gid:443005  TTHA0718  uracil-DNA glycosylase
MTLELLQAQAQNCTACRLMEGRTRVVFGEGNPDAKLMIVGEGPGEEEDKT
GRPFVGKAGQLLNRILEAAGIPREEVYITNIVKCRPPQNRAPLPDEAKIC
TDKWLLKQIELIAPQIIVPLGAVAAEFFLGEKVSITKVRGKWYEWHGIKV
FPMFHPAYLLRNPSRAPGSPKHLTWLDIQEVKRALDALPPKERRPVKAVS
QEPLF
>gid:443008  TTHA0721  conserved hypothetical protein
MKEVYRYAYHYAGRPVGEGRLEVERRRGGVRASLQAEFLPPLPPGRQRWQ
TELDAEGFSLRFQERVEGKEVRVFAVERLEEEGVVLVSQGKESLAYPYLA
PYHDPLSLFLALPGLALEPGEVVRFPMPGGRVYVERLPDVEVEGRARRQY
RLRPGLSLVQVEEGRLVRVAQQVGRHVFEAVLLEAEGP
>gid:443101  TTHA0813  DNA polymerase III epsilon chain-like protein
MNALRFLGALLLGLLLVAGSLALGLFLLLEGNPEAQAALWEAVRARPMVP
LFTGLLLLGALSLLLYPPFLGYLALTRALGQESEVLLAHPGHRLTPRGPW
ELRHLARLINRLAEEKERLEQRLEEEAAQAKDLVEAERERLARVLAQLPQ
GVVLSDERGLVLLYNPKARALLGEGLGVGKSLFGLLDRSLLLHAQSLPQA
AFLVQGPKGPLRLKARALEEGFLLLLEEALPEGPSRERLHRLKDKAAGVR
ALVEVLERETTGEAKRLLQVAREALDEIQGLLQDLAPSPHEEVLAQDLLR
LLAGRLEARLALTPGWALDPEAEGLLVQADTFALAEGLAKTLEGTEEVFL
RGEAEGEGLFRLTVLLPREAPRPHPLLAEAAEATGSLWREGSRLVLLLPA
RKAPPEALKEAPAPRALVYDLTLLQVPPGLEDVPLDQLLYTAFDLETTGL
DPEQDAVVALAGVHVLGRRVLRQEVFEALVNPGRPISPAATAVHGLTAEM
LRDKPPLEAVLPAFRAFVQDTVLVAHNGAFDLAFLRRAGLDQPPLLDTLL
LAQLLFPDLKDYRLEALAHRFGVPATGRHTALGDALMTAEVFVRMQPLLF
ERGLKRLWDVVEACRRLPLARLRY
>gid:443123  TTHA0834  endonuclease IV
MPRYGFHLSIAGKKGVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAE
VEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADDLEKAALL
GVEYVVVHPGSGRPERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGA
RFEELAWLVADTPLQVCLDTCHAYAAGYDVAEDPLGVLDALDRAVGLERV
PVVHLNDSVGGLGSRVDHHAHLLQGKIGEGLKRVFLDPRLKDRVFILETP
RGPEEDAWNLRVFRAWLEEA
>gid:443153  TTHA0863  MutT/nudix family protein
MSPWERILLEEILSEPVRLVKERVRTHTGRELTYVYRPGPVAASFVLPVT
ERGTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAE
TLIPLPSFHPQPSFTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTE
VYALLAKGEIQDASTALTLFYAEPHLKRLGLL
>gid:443174  TTHA0883  probable transposase
MEVGYLDESGFSLTLPPTYAWGRRGEAKGVPRAWGSRGRVNVVGHLVRGR
EGERLFFALLEGPVRWEVVRGYLDRVAEGLAKPLKVFMDNAPFHRSREVE
GRKEAWRERGLMVAYLPRYSPHLNPMESVWRRVKGFLMPRRHYGSVEELK
EAVAQALKALGGVELKILGEGT
>gid:443175  TTHA0884  probable transposase
MAAPLRIQLTPEEDRLLLELSLDPRTHKKTRLWAMMVRLAAEGWTAPKIA
QHFHKDRTTVYLVLRRFLREGLQGLAYRKPPGAPRKFTPEMAAFVEERLA
EDRVWTAPQLAAALAERFGVRLAPKVVARHLRAMGYVWRRTRYVPLGKPT
EEEVKAFAEEEEEAKRGRRRG
>gid:443180  TTHA0889  transcription-repair coupling factor
MEIALERIYGHRLALPQVGAALLFAQEAPPALLLVPEARLRRYRDLSAFG
AKVYVNPGLEALEEKALFVLSYEEALSPFPEDPEAWRLLLEVGRAYPREA
LLSRLLKLGYARDEDYRVLGEVVELGEVRLEFFGDELERLVVRGEERRRH
VLLPKPGKAEGFTSKKVLHFPGPVYLDTPALAPKALWPLLAGRPWVALGG
GVELPPLELGARPLPPYRGSLKALEKDLARWLAEGKRVHLFVGHARTLEY
LKRRLQAFSPLILDRFPGPKGRLALLPGDFEGGAEWGEWVLLTEALVFAT
GGVRARVRVGEGLSDPGALSPGDYLIHPEHGVGQYLGLETREVLGVKRDY
LVLRYKGEGKLYLPVEQLPLLKRHPGTTDDPPELSSLGKNEWQRAKERAR
KDVEELAGRLLVLQAKRKATPGRAFPPLPEWDPLVEKGFPYELTPDQKRA
LEEVLRDLESPHPMDRLVSGDVGFGKTEVALRAAHRVVGHGAQVAFLVPT
TLLAEQHGKTFRERFQGLPVRVAVLSRFTPPKEEEAILKGLAEGTVDIVI
GTHRLLQEDVRFRDLGLLIVDEEHRFGVAQKERIRELKAEVDTLYLSATP
IPRTLYSALVGLKDLSSIQTPPPGRKPIKTFLAPFDPLLVREAILFELER
GGKVFYVHDRVASIEARRRFLENLVPEARIGVVHGQMPESLIEETMLLFA
EGAYDVLLATTIIEAGLDVPEANTILIERADRLGLATLYQLRGRVGRREE
EAYAYLFHPPRLTEAAEKRLAAIADLSDLGSGHLLAERDMEIRGVGNLLG
PEQHGHIRALSLEVYTELLEEAIRKLKGEAKEERRHVTLDLALSARLPAE
YVGSLEARSRYYSRFAEAKSLAELSRLVRELKERYGPLPEEAENFVALAR
LRLVAERKGVVSITEGLTHLEVVFPRYPLDYDARGLKGLPYRVELTQYPP
GFRLEKKGLRPRDYPEALMEVLYLFADL
>gid:443212  TTHA0921  transposase (probable DNA-binding protein 1A)
MTFAGIDVSKTHLDLALVSNSPKPTRLRFPNSPEGRQALLAALAHHNPAW
VALEPTSAYHLPLLKLLAENRLQVALVNPYHLAAFRKAKGERQKTDRQDA
LLLARYAQVYHEDLRAYTLPPETLRELKALVGYREDLAGRERTILNQMEA
AEWAGSKEVLALLQKELACVKGLLGEVEARIQALLATLPEAEVLMALPGV
GPQVAAAVLALLPPELWGRAKRAASYAGLIPEREESGKSVERSRLSKKGP
PLLRRKLYMGALVAVRHDPEMRAFYHRLLSRGKRKKQALVAVAHKLLRRM
MGRLREYYATQLDQGVA
>gid:443220  TTHA0928  methyltransferase
MGFAKPPWGGKLKGVVRILGGKARGVALKVPASARPSPVRLRKALFDYLR
LRYPRRGRFLDLFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRT
GLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGL
VEAGGLYVLQHPKDLYLPLGERRVYGENALTLVEV
>gid:443267  TTHA0974  integrase/recombinase
MYNAPMPEGPAAHVIWKTIGLKRPEKALWPLAPYAEYLLLERGYSPRGVR
RYLQDLAFWFRFLEAEGLSPSPEAVRALLLRERWAPRRVQGFLAALRSYY
RYLREVKGEAASDPTEGIGRPKAGRRLPLHPGPEELKRFLEAFREEKEAA
LLEALARFLYGTGLRISEALSLKGRNVVLEGGSPVAVRVVGKGNKERLVP
LSKTAREVLEALGRPQGNVNIFTFSQGRRKGHVPSARWVEAKFREAALRA
GLDPRRFTPHKLRHAYATLLVERGVELDAVKDLLGHESIATTQIYLHASR
ERLREAASRLPEL
>gid:443291  TTHA0998  ATP-dependent DNA helicase
MKLYVASAGTGKTHTLVEELLALVKGGVPLRRIAAVTFTRKAAEELRARA
RKGVEALAREEPGLGGAVREVHGAVFGTIHGFMAEALRHAAPFLSLDPDF
AVVDELLAEALFLEEARSLLYLLGEDPGLEAFLRRLYQGRTLAEAFRPLE
GAEGLVRLFAEALARYRRRAQEVLGPGDLEALALRLLRHPQALARVVERF
PHVLVDEYQDTSPLQGRFFRALEEAGARVVAVGDPKQSIYLFRNARLEVF
REALGRAEEVLVLDETRRHARRVAAFLNRFVALFPEGERVAVRPTREAEG
RVEVHWVEGGAGLEERRRFEADLLARRLLALKAEGYAFGEMAVLVRSRAS
LPLLERAFRARGVPYVLRRGQSFFNRLEVRDLYHALRLALLEGPPGPEER
RSLLAFLRSPFVGLNLGEVEEALLREDPLPYLPQAVRDRVAWLRGLAGKR
PLEALKALVRDEVFLSRLSPRARANLDALLLLAGLERFPDLEALLEWLRL
RALDPEASELPEGGEGVGLLTVHAAKGLEWPVVAVYDVARGEPGPASPVL
VGPEGEVAVAGTRAHRDLAQRLAQAQREEAVRLLYVALSRARDVLLVTGS
RSGRESPWAQALERLGLGPESQDPLVARHPVPQGWRPPRPAPAARREGPP
APYAEHLLPPRPLPLVHSPSAHLKAEPKPLAEALEGEAVSGFARALGTLV
HYALARDLDPEDGRAMRALLHQEVAFPFAEGEKERLLAEVRALLRRYRGM
LGRELPALEERAEDYRELPLVLPLKGTVWHGVLDRVYRVGDRWYLDDYKT
DREVRPEAYRLQLALYRRALLEAWGVRAEARLVYLRAGRVHAFGEAELEE
ALAALPS
>gid:443309  TTHA1016  conserved hypothetical protein
MAKPDAPRLIEVDFPLREVSEHSVREKNIRHGHISTLHIWWARRPLAASR
ATALAALLPDDPRHREELLGLVKSLAPWKAVQGENPALEKARRLILEAHG
GRPPRVLDPFAGGGAIPLEALRLGCETYAVDYNPVAVLLNKAVLEYPQKF
GRPGSVSFIPLPPGWGKEEGQQAILSTSQEEKSPLVEAVRAWGEWVLEEA
RKELERFYPKDEDGSIPVGYIWARTLPCQNPACGTEIPLMRQTWLAKKAN
RRVALKMIPNPEAKRVDFAIVEGGAIDFDPEEGTVSRANVRCPLCGGTIN
DSTTRRLFREGKAGERMVAVVLHKPGTTGKRYRLATERDLEAFRAAREAL
ETKRQELWAEWGMDPVPDEPLPPKETLGFRVQRYGLTRWGDLFNPRQKLA
LITFAERVRRAHAEMLREGAEPEFARAVGTYLGLALDRTLMFTTSLTRWK
PDAECPVDVFARQALPMTWDYAENTPIVAHSGAFLDQVERMLYCLPLAFS
GDQAASIHNGSATSLPFPSAHFDAVLTDPPYYDSVPYADLSDFFYLWLKR
TIGDLYPELFATPLTPKSEELVADASKAGGMEAAKKRFEEGLTQAFREIH
RVLKDDGIAVIVFAHKTTEAWEAIIQALLNAGLYMTASWPIHTEMQSRLR
AQDSAALASSIYMVCRRRTTDEVGLYPEVQREIEERVRERLAQFWDEGIR
GADFFMSAIGPAVEAFGKYARVEKLSGEEVTVGELLEYVRKVVGEFALKR
ILEEGELGGVDLPARFYVLWRFAYNHARVKFDEARKLAQSVGIELSEYWD
GRGFVQRQGGLVWVLGPKERGRGFLERERHENMVDVLHKAVLLWEKGDRR
GLEKLLSGSPFPQGALRKVAQAVVDVLPDGDKEKQLLQGLLYGWRDTTSG
RSPGQGGLFESEQG
>gid:443311  TTHA1018  transposase
MFNRGAHLGTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQV
HGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEV
AVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDEVLEAAGAFRTRPL
PEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPT
ESALGWEGVLGELWQRGLRRVLLFVTDGLPGLPEAIRRVYPQAEWQRCVV
HGVRWSLSQVRSRDRALLAEDLRRVYGAESREEALGALEEVKAAWGSRYP
GVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIRELRRGTKVRDHK
FPKEEAVYKLLYLESERQEGRWAERKLKGFSEVKEVLEKMLQERYAPRTQ
TLTQSP
>gid:443313  TTHA1020  conserved hypothetical protein
MGFGLDPKDLRPGDVLEGDCFPEPVRVIQIQVWGDLFRLEAVGTRTQGYY
DRVLSIQDLGSLRRFRASGGRDFGGAPEAFFLAVEGHRIRFAQQFDPLFA
VNVSQIDPLPHQIEAVYFYILRNPRVRFLLADDPGAGKTIMAGLLLKELK
YRGLVQRTLIVVPGHLKDQWRREMKERFAETFLVVDRGMVEANWGRNVWR
EHPQVITSMDFAKRDEVLASLAEADWDLVIVDEAHKMTAYRYGEKTHKTE
RYRLGELLSRTSQFLLFLTATPHRGDPENFRLFLDLLEPGFFASRELLLE
SIARKDNPLFLRRLKEDLKDFEGRRLFPPRKVFTVTYYLSDEEKLLYNAV
TSYVEASYNKALAREKRNVAFALLILQRRLASSVRAVRRSLERRRERLAQ
LLEVGRWLAERGEVDEEALEDLEEWERLKREEDLVAQLTAAETREELERE
IAQLDELIALARRAERLEIETKLRKLREVMEDERLQQTGEKLLIFTESRE
TLEYLVEKLRGWGYSVVSLHGGMDLDARIRAEHEFRERAQVMVSTEAGGE
GINLQFCSLMVNYDIPWNPNRLEQRMGRVHRYGQTKEVHIYNLVALDTRE
GKVLEALFRKLREIQEALGSDRVFDVVGEVLPGKSLKELIVEAIANRRTL
DEIVCEIEAVPDQEAVRRVREAALEALAVRHIDLTQVLGEERRARENRLV
PEYIERFFERACRFLGVPLERRGDGLWRVPRVPHELRDLSREFKDRYGEV
FPEYRKLAFSKELARRHQAVLVAPGHPLLEAIIERLLSRSEGELRRGALF
ADPDGKLEGFLWFLEVEVRDGQNQVAGKRLFAVYQSEAGELRLVHPSVLW
DLKPLSPGEASFDGGLLDEGRVVGFAIEQALEPYRQELLAWRERDAEVKR
RYGLRSLEQMLLDSEAKLLEYETRRAQGENIPEATLQNERRRKEELEARK
KRLEEAIRRELSLTAAAPRVLGVARVVPLVKGEAAMRPDPEVEAIGMEVA
LRYEREAGWTPEDVSRENLGYDIRSVSPEGAVRYIEVKARAATGPVALTP
NEWVMAQRLGEDYWLYIVEHAATRPVLHRVQNPAAKLAPKEVVDVVRYVV
NDWKKAAESS
>gid:443321  TTHA1027  DNA integration/recombination/invertion protein
MRRRGKGGGSVFYHEGKGKWVAQLTWIDPATGRKVKREKHCETRKEAERA
LADMVVAQAKGLLTDPSRLTTRDFALDYLKRLEREGLRPNSIRLAQEELA
HALPSLKDPKAHDPLGRMRLQEVKPVHVRAAVDRVAEAGYAPRTVGRVLM
RLKALFREALRLELVARNPAEAVRLRLPKGEKTARALEPQEVARLLETAE
ASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGELTVWRSWTKARG
KGAFSEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEEVDGLFLVGG
VKPVDPDAFNHYLRRLAERAGLGRVRVHDLRHTWATLALSRGVPLEVVSE
RLGHASPTITLNVYRHLLEEERRGWVLDLEELLYPAPRAQA
>gid:443349  TTHA1054  DNA polymerase I
MEAMLPLFEPKGRVLLVDGHHLAYRTFFALKGLTTSRGEPVQAVYGFAKS
LLKALKEDGYKAVFVVFDAKAPSFRHEAYEAYKAGRAPTPEDFPRQLALI
KELVDLLGFTRLEVPGYEADDVLATLAKKAEKEGYEVRILTADRDLYQLV
SDRVAVLHPEGHLITPEWLWEKYGLRPEQWVDFRALVGDPSDNLPGVKGI
GEKTALKLLKEWGSLENLLKNLDRVKPENVREKIKAHLEDLRLSLELSRV
RTDLPLEVDLAQGREPDREGLRAFLERLEFGSLLHEFGLLEAPAPLEEAP
WPPPEGAFVGFVLSRPEPMWAELKALAACRDGRVHRAADPLAGLKDLKEV
RGLLAKDLAVLASREGLDLVPGDDPMLLAYLLDPSNTTPEGVARRYGGEW
TEDAAHRALLSERLHRNLLKRLEGEEKLLWLYHEVEKPLSRVLAHMEATG
VRLDVAYLQALSLELAEEIRRLEEEVFRLAGHPFNLNSRDQLERVLFDEL
RLPALGKTQKTGKRSTSAAVLEALREAHPIVEKILQHRELTKLKNTYVDP
LPSLVHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAF
VAEAGWALVALDYSQIELRVLAHLSGDENLIRVFQEGKDIHTQTASWMFG
VPPEAVDPLMRRAAKTVNFGVLYGMSAHRLSQELAIPYEEAVAFIERYFQ
SFPKVRAWIEKTLEEGRKRGYVETLFGRRRYVPDLNARVKSVREAAERMA
FNMPVQGTAADLMKLAMVKLFPRLREMGARMLLQVHDELLLEAPQARAEE
VAALAKEAMEKAYPLAVPLEVEVGMGEDWLSAKG
>gid:443385  TTHA1090  Holliday junction resolvase RuvC
MVVAGIDPGITHLGLGVVAVEGKGALKARLLHGEVVKTSPQEPAKERVGR
IHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGV
PVYAYGPMQVKQALAGHGHAAKEEVALMVRGILGLKEAPRPSHLADALAI
ALTHAFYARMGTAKPL
>gid:443392  TTHA1097  DNA ligase [NAD+]
MTLEEARKRVNELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEER
FPELKSPDSPTLQVGARPLEATFRPVRHPTRMYSLDNAFNLDELKAFEER
IERALGRKGPFAYTVEHKVDGLSVNLYYEEGVLVYGATRGDGEVGEEVTQ
NLLTIPTIPRRLKGVPERLEVRGEVYMPIEAFLRLNEELEERGERIFKNP
RNAAAGSLRQKDPRITAKRGLRATFYALGLGLEEVEREGVATQFALLHWL
KEKGFPVEHGYARAVGAEGVEAVYQDWLKKRRALPFEADGVVVKLDELAL
WRELGYTARAPRFAIAYKFPAEEKETRLLDVVFQVGRTGRVTPVGILEPV
FLEGSEVSRVTLHNESYIEELDIRIGDWVLVHKAGGVIPEVLRVLKERRT
GEERPIRWPETCPECGHRLLKEGKVHRCPNPLCPAKRFEAIRHFASRKAM
DIQGLGEKLIERLLEKGLVKDVADLYRLRKEDLVGLERMGEKSAQNLLRQ
IEESKKRGLERLLYALGLPGVGEVLARNLAARFGNMDRLLEASLEELLEV
EEVGELTARAILETLKDPAFRDLVRRLKEAGVEMEAKEKGGEALKGLTFV
ITGELSRPREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARAL
GVPTLTEEELYRLLEARTGKKAEELV
>gid:443445  TTHA1149  uracil-DNA glycosylase
MDREAFVQTLTACRLCPRLVAWREEVVGRKRAFRGEPYWARPVPGFGDPE
ARILLFGLAPGAHGSNRTGRPFTGDASGAFLYPLLHEAGLSSKPESLPGD
DLRLYGVYLTAAVRCAPPKNKPTPEELRACARWTEVELGLLPEVRVYVAL
GRIALEALLAHFGLRKSAHPFRHGAHYPLPGGRHLLASYHVSRQNTQTGR
LTREMFLEVLMEAKRLAGL
>gid:443463  TTHA1167  single-stranded DNA specific exonuclease RecJ
MRDRVRWRVLSLPPLAQWREVMAALEVGPEAALAYWHRGFRRKEDLDPPL
ALLPLKGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALG
ADVHPFIPHRLEEGYGVLMERVPEHLEASDLFLTVDCGITNHAELRELLE
NGVEVIVTDHHTPGKTPPPGLVVHPALTPDLKEKPTGAGVAFLLLWALHE
RLGLPPPLEYADLAAVGTIADVAPLWGWNRALVKEGLARIPASSWVGLRL
LAEAVGYTGKAVEVAFRIAPRINAASRLGEAEKALRLLLTDDAAEAQALV
GELHRLNARRQTLEEAMLRKLLPQADPEAKAIVLLDPEGHPGVMGIVASR
ILEATLRPVFLVAQGKGTVRSLAPISAVEALRSAEDLLLRYGGHKEAAGF
AMDEALFPAFKARVEAYAARFPDPVREVALLDLLPEPGLLPQVFRELALL
EPYGEGNPEPLFLLFGAPEEARRLGEGRHLAFRLKGVRVLAWKQGDLALP
PEVEVAGLLSENAWNGHLAYEVQAVDLRKPEALEGGIAPFAYPLPLLEAL
ARARLGEGVYVPEDNPEGLDYAWKAGFRLLPPEEAGLWLGLPPRPVLGRR
VEVALGREARARLSAPPVLHTPEARLKALVHRRLLFAYERRHPGLFSEAL
LAYWEVNRVQEPAGSP
>gid:443559  TTHA1260  DNA primase
MDAGQAVELIKSRLSLREVVSRYVALKPAGRGRWKGLCPFHQEKTPSFYV
DEEKGLFYCFGCKAGGDLFAFVQRAEGLDFPEALERLAEEAGVELPRRKA
PERRRELLEVLALAQTYFLEHLHAHPEALAYLRKRGLTEESVARFGLGYA
PPKGDGLVAFLARHGVAPEEGVRAGVLAERQGRFVDRLRHRITFPIKDAF
GRVVAFTGRALGEDGPKYLNTPETPLFRKQEVLFAYPEARPALREGRAIV
VEGLFDAIALHQLGFPETVAVLGSGLSEGQALLLKKAGVLEVYLAFDADE
AGQKATLQSLNLELAPRFLFYAVRLPAKDPGELLLHPEGRALFQKALEEA
LPEVAFRFEEASRGLDLSRPEHKRKVLEALTPRMLTPEPFDPVAERLKAL
VVERLGLSPKSLEDYLASLRTRGRPAPPPPPPPPIPGNKTLLLELDAIAL
LLSAPEERFLELVDYVETQVWPPEGSFLGEFLALARKEPRRDHLRRTLSQ
REEGGRLFERLLLAPRGEDPRLQEKLDHTLARLREAYLQERLAKVKAALA
QNPDPPTLERLLKEYQEIRVAIEAERRLYKRRPPPSGWST
>gid:443565  TTHA1266  DNA helicase RecG
MEGVTQEELKARLLKPLLRELQDGARDRVVVGGLEALVQNLARPFPKLLE
LFRGYGEKPQEERKRVLQEALRLLEGQGPSPKGQAQASSRRLAPSDPAHL
LAPPQSRRKLAELGLRTVRDVLHHYPRRYEDRRALPGARYLEEGQKATLA
VKVLAKELVKTPRKGMQLVQVKAQDAWGWRITLVWFNQPWVLSQIEEGAT
LIVTGRVGRRNGLQLYVEHFEDEGTESLSTGRIVPIYPAKEGVSQAFLRR
TVHRALELALPLPDPLEAYREDLGLMPYAEALKAIHFPEDEEALKRALLR
LKFDEYLLLELKALLEAGGMVLGRSFRVEEAWVEAFKKALPFPLTRAQER
VMGEIAKDMQSPRQMARLLQGDVGSGKTVVAAFALFLAAKNGAQGALMAP
TEILARQHYQNLTRYLFPLGIRVELLLGSMTAKEKEAAMARLLSGEAQVA
VGTHALIQEGVGFRDLGLAVVDEEHRFGVLQRRALLKLAKAPPDVLVMSA
TPIPRSLALTLYGDLEVSVLDEMPPGRVPVKTKVLPHRLRLQAYAFAREE
VRKGHQVFVVAPAIEESEELDLKAATTLYEELKGLLPGVRLALLHGRMPA
REKDEVMEAFRRGDYDLLVSTTVVEVGVDIPKATLIIVENAERFGLAQLH
QLRGRVGRGGLEGYAVFIAGEAGQKTLKRLKILEESTDGFYIAEMDLKLR
GPGELRGTRQSGYPELKLGDLAEDTGIIEKARALAKAIVDKDPTLDLPEH
RALKEELRAQAERVGFREVI
>gid:443568  TTHA1269  transposase
MFNRGAHLSTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQV
HGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEV
AVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDEVLEAAGAFRTRPL
PEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPT
ESALGWEGVLGELWQRGLRRVLLFVTDGLPGLPEAIRRVYPQAEWQRCVV
HGVRWSLSQVRSRDRALLAEDLRRVYGAESREEALGALEEVKAAWGSRYP
GVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIRELRRGTKVRDHK
FPKEEAVYKLLYLESERQEGRWAERKLKGFSEVKEVLEKMLQERYAPRTQ
TLTHNS
>gid:443584  TTHA1284  serine/threonine protein kinase, putative
MLLGLGQTAQVHLARAPDGTRVALKIPKKEVRQDPRLAERFAREVSFSLS
LRHPHLVRGLAGVPFGEGAFLALEYFPEGTLEDRLRQGPLPWEEAVKALL
HVGEALGFLHERGLLHQDVKPSNVFVGQGVYKLGDLGTLRRVDDPSAEYA
GSPHYLAPELFLGARPSPASDAYAFGVLAYEVLTGRRPFQEAAPRQAPRG
PARP
>gid:443588  TTHA1288  exonuclease SbcC
MRPLRLELEGFGPYRERQAVDFSDVELFAITGPTGSGKSTLLDAIAFALY
GQVPRVGRQVGTLKHPAAAKAWVSLTFRVGERVYRVERSRSEKRGDARVY
LLEGGERLLDLPTLEAVNRALADLVGLDYEAFTRALLLPQGEFDRFLKGE
PKERRQLLLELFELSRLERARQKAAERRGLLLEEKGRLEGELNGLSAATP
EALEELERALAASRAEAARLEEEARGVRKALAEAEALLEDLRRRQALAAR
LEALKARAEEMARVEERLSRAEEAERALPLWRDYQKKRAALQATEKALEE
AEGRLRALEARREALGFSPEALERAQAAYAEAQDLKAFEALLARAPAGKA
PASGPDPATAQARLEEVLKALEALGAELLRLRAWAEAWEALRAKEAALAE
VGEALARLEAEGKEAREARDALALRLKEAEAHALSQALKALEAERKALEK
AQEDLDRRREALLREERRLGLLAYHDLLEPGKPCPLCGGVVHALPPLPEV
PDLAGARRALEEEAQALARRLARLEAEAGDLAARLRALEVEPRPGDPEAL
KGALEAAEARLQDLRDRYQALRGEARALEREVAALRAREAEARGGASRED
LASRLEAAEARRLALEEEAGRLAAGLRRHLEAKTGGLGVGPYLRRLKEEV
ERLKGLAAEDARLREEAGALRAELSALRARKEEQAKALAEAEAATRGLMP
EAEAQGLALSPGEREALRAELEAFRKDLAEAEAAWRSLPPLSGPAPTLEE
AQGRVEALRKALAELEGRLEEKRKEEGALEDRVERLRKDLARRREVEGAL
ARLVAELALWEKLALDLQAHNFPAYLLGLKQRSLVERASELLYTLSGGRY
RFAAQGDEYLVVDLWAEATARQVRTLSGGESFLASLALALALSEELSRGK
LEALFLDEGFGTLDPEALELVAGILESLPTRGRLVGVVTHVEALAERFPA
RLRVRKHPWGSRVEWA
>gid:443589  TTHA1289  exonuclease SbcD
MRLLHTADWHLGKLLKGVDRTPEIAAALRDLLGLVRSERVDLVVVSGDLF
DRPQVSAEAEACAVEFFMELKALGVPALVIAGNHDPKERLEALAPLLGLA
GARVRGRLLFAEEGGVVEVGGVRAGLLPFVSERLLVRRLFQEDEVLHRTY
AEALRRVLDNLKSPLLLGHFAVEGARPGGGEFVFHLVGSYAVPRASLPLE
VRYLALGHVHRQQQVSEAPVAWYPGSLVQLDFGEGEGAERGALLVELPPS
GPPRVHPIPGRWGKPLRTYRLRPEELDGRMGELERFPGYLRLVVEGRLSP
QVKENLFRALPHLLAVEGAPLQAGEGRREEVQDLGFVEGYARYLEERGRK
EEALLERFAEVLAEVEGEALTA
>gid:443624  TTHA1323  DNA mismatch repair protein MutL
MIRPLPPELRGLLARGEVLLTVKDAVRELLENALDAGARRVRVELWGGGL
KRLVVEDDGEGIPLEDLPLAVEPYATSKLQDLEGIRTLGFRGQALYALRQ
AARLRIRSRPRGQLGGGLLLAEGERVEVRPVPAPPGTRVEVEGLFLGEGR
DPKGEVRGVLELLKRYLLHHPRLALALFAEGEARLLFPGAGLEEAARLAF
GRLLAKRLLPLAYGAGGLEVQGLVSRPEVSRTRPDRLFLAVNGRPVAFPE
GLLRRVRRAYRELLPEGHYPVGVLNLFLPQEAFRLRLDARKEEVVLSEEV
EALVEEALLALFRRENLARALPEPKPLQPLSPPTASGLPRLRFLAQFRES
YLLAEAGDTLYVVDQHAAHERILYEDLLKRVAEGPKPLPRPLLVPLAPEE
EALLEAGQEALAALFRWEPFGPGRVRLLMAPAFLHPYPLLLPEVFKEALR
GEGRSLKALLARLACLPAVKAGHPLGEAQGQALLDALLACETPWACPHGR
PVLLALKEEDLIRRFGRRSGARGGGEARPRPQEESFPEAPLPREP
>gid:443625  TTHA1324  DNA mismatch repair protein MutS
MGGYGGVKMEGMLKGEGPGPLPPLLQQYVELRDRYPDYLLLFQVGDFYEC
FGEDAERLARALGLVLTHKTSKDFTTPMAGIPIRAFDAYAERLLKMGFRL
AVADQVEPAEEAEGLVRREVTQLLTPGTLTQEALLPREANYLAAIATGDG
WGLAFLDVSTGEFKGTLLKSKSALYDELFRHRPAEVLLAPELRENEAFVA
EFRKRFPVMLSEAPFEPQGEGPLALRRAQGALLAYARATQGGALSVRPFR
LYDPGAFVRLPEASLKALEVFEPLRGQDTLFGVLDETRTAPGRRLLQAWL
RHPLLERGPLEARLDRVERFVREGALREGVRRLLFRLADLERLATRLELS
RASPRDLAALRRSLEILPELKGLLGEEVGLPDLSGLLEELRAALVEDPPL
KVSEGGLIREGYDPDLDALRRAHAEGVAYFLDLEAREKERTGIPTLKVGY
NAVFGYYLEVTRPYYEKVPQEYRPVQTLKDRQRYTLPEMKERERELYRLE
ALIKRREEEVFLALRERARKEAEALREAARILAELDVYAALAEVAVRHGY
TRPRFGERLRIRAGRHPVVERRTAFVPNDLEMAHELVLVTGPNMAGKSTF
LRQTALIALLAQIGSFVPAEEAELPLFDGIYTRIGASDDLAGGKSTFMVE
MEEVALVLKEATERSLVLLDEVGRGTSSLDGVAIATALAEALHERRCYTL
FATHYFELTALALPRLKNLHVAAKEEEGGLVFYHQVLPGPASKSYGVEVA
EMAGLPKEVVERARALLSAMAARREGALEEVLERLLALDPDRLTPLEALR
FLHELKALALGLPLGSMKG
>gid:443649  TTHA1347  endonuclease V
MRPPPFPKPAHPEEALALQRALAKKVRLAGSLEGVRRIAALDASHKRGRP
LVAVALLYDLEKGPLHVATALLPEEALFPYVPGLLSFREAPAYLEALAAL
PEAPEALLVDGQGVAHPRGLGIASHLGVHLDLPSVGVAKRLLYGRPEAPL
PEEKGAAVRLLAPDGRPLGYVYRSRTGVKPLYVSPGHRVGLEEALRFVRR
LPTRFRLPEPLRLAHLEAGRALKALD
>gid:443651  TTHA1349  DNA-binding protein HU (DNA-binding protein II)
MAAKKTVTKADLVDQVAQATGLKKKDVKAMVDALLAKVEEALANGSKVQL
TGFGTFEVRKRKARTGVKPGTKEKIKIPATQYPAFKPGKALKDKVKK
>gid:443652  TTHA1350  conserved hypothetical protein
MRVGLVHGFLSRRYLDFWRAYLEALGVEVVEAAPPPSDLPFCLPVQRLLA
QVEALKEAGVDYLLLPDLQGGVESERGGGQCPWLLDLEAALLRYFPGLPP
VLKVPAELSERVLGRAGEVGQLLVRNPMLVGRALDRTRRLLKPPPPLPTP
QGSVGVVAQPYLLEEPAFRREVEAALRAHGLEAYFPDLPPERLREEADRL
LPVDLPTDRELVGAIHYLGRLGRVKGLALVVSYACPPIPGLMRKAARRLG
KPYRLLTLGEDWQEPLAALKAEMEKGNRGG
>gid:443657  TTHA1355  DNA gyrase subunit A
MAQVLPVEITEELKQSFINYAMSVIVDRALPDVRDGLKPVQRRILFGAYQ
EGVLPGRKHVKSAKIVGEVMGKYHPHGDAAIYDALVRMAQPWNLRYPLID
GQGNFGSIDGDPPAAQRYTEARLSPIGAEMLLDIDKDTVDFRPNYDGSLK
EPEVLPAAIPNLLVNGASGIAVGMATSLPPHNLSEVVDALVAMIENPAIT
LEEVMRHLPGPDFPTGGKLSKKGIKEAYATGRGSLKVRAKVRVEEKGQRP
VLVVTEIPYQVNKASLIAQIAALVKAKKIEDIVGLRDESDRQGLRIAIEL
KRGANPQVVLNQLYKHTALQTSFTVNLLAIVDGEPKVLSLLDLMRHYLDH
RKEVVRRRSLFELRKAEERAHVLEGLLIALDHIDEVIALIRGSEDAPKAR
IALMERFGLSEAQAQAILDMRLQRLVALEREKLLEEYRGLMEEIARLKAI
LEDEARLLAEVKADLLRVKEKYGDARRTLITEFEETFNPEDLIEDEPMVI
TLTAQGFLKRLPLESYRAQGRGGKGLLAGRTKEEDEATHVFVADAHDDLL
LFTNRGRVYRLKVYELPEMGRQARGVHVKSLLPLAEDEEVAALLSVRGLD
QEGYLVFATERGLVKRTALKEYQNLGQAGLIAIRLQEGDRLVGVALSDPE
DEAILATQEGQAIRFPLEEVRATGRDTQGVIGVRFKKPEDRVVSLVVVKP
GEMVDLLSVSTRGYGKRTPLSEYPLQGRGGMGVITYAVSTKVGRLAALLK
VRGGEDLLVLSRRGLAIRTPVAEIRQYSRATAGVRVMNLPEDDEVASAFV
VEEEK
>gid:443672  TTHA1370  serine/threonine-protein kinase-related protein
MSLVGKTLSGRYRVVRPLARGALARVYLAFDPFGTPYALKLFPPKARPRR
DRELWVGRRLAHPNLNPVLEALDLEEGPALLLAYAPGEELGRWMGKSPAF
SQAMRVFHQLLLALAHMHEKGLVHRDVKPENILVNAGEARLLDFDLSGPA
QERFQKPLLLGTPAYLAPELLRGLPSGPEADVYAAGIILYWMLTGEHPFA
DPSGQVSLDPDRGPHPPVAGLGEEAALYLERLLAPDPKARFPTAQEALKA
FPF
>gid:443730  TTHA1426  hypothetical protein
MRALASTPRPLLYLHRGGGGFFDLLLAQVTRARLPLFLHPVAMEEGWEAF
LPCLKGLGFAGAVLEEAASAPEGVRLEAEAEKARRVDLLVPAGGGLLGQY
TEGVALERLLAQRFPGARALWLGPLRFELAPFLRGLGEVHVAAPSYAEGD
AFLARLPAPLRGRVALRPEEVRALVLRVDLLLLNTPRPPLDLAQPYHAAL
ALAPGARAVAERVQLFLGPEDLWSGRVWAVLEGLGHTPLG
>gid:443731  TTHA1427  UvrD protein
MSDALLAPLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRG
VFPSEILAVTFTNKAAEEMRERLRGLVPGAGEVWVSTFHAAALRILRVYG
ERVGLRPGFVVYDEDDQTALLKEVLKELALSARPGPIKALLDRAKNRGVG
LKALLGELPEYYAGLSRGRLGDVLVRYQEALKAQGALDFGDILLYALRLL
EEDEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAGEEANLMAVGDPD
QGIYSFRAADIKNILDFTRDYPEARVYRLEENYRSTEAILRFANAVIVKN
ALRLEKALRPVKRGGEPVRLYRAEDAREEARFVAEEIARLGPPWDRYAVL
YRTNAQSRLLEQALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLD
AVSLKRVLNTPPRGIGPATWARVQLLAQEKGLPPWEALKEAARTFSRPEP
LRHFVALVEELQDLVFGPAEAFFRHLLEATDYPAYLREAYPEDAEDRLEN
VEELLRAAKEAEDLQDFLDRVALTAKAEEPAEAEGRVALMTLHNAKGLEF
PVVFLVGVEEGLLPHRNSVSTLEGLEEERRLFYVGITRAQERLYLSHAEE
REVYGRREPARPSRFLEEVEEGLYEVYDPYRRPPSPPPHRPRPGAFRGGE
RVVHPRFGPGTVVAAQGDEVTVHFEGFGLKRLSLKYAELKPA
>gid:443744  TTHA1440  excinuclease ABC subunit A (UvrA)
MDRIVIRGAREHNLKNISLELPRGKFIVITGVSGSGKSTLAFDTIYAEGQ
RRYVESLSSYARQFLGVMDKPEVESIEGLSPAISIDQKTTSHNPRSTVGT
VTEIHDYLRLLFARVGQAFCPECGRPIEKQSASEITDRLLKRPPGTRAIL
MAPLVRGRKGEYRKLFQQLLKEGYARVRVDGVIYLLEEAQGLSLEKYEKH
DIDLVIDRVVLKEEERPRIAEAVELALLRGEGLLRVLYPDTGEEELFSEK
FACPEHGSVLEELEPRIFSFNSPYGACPACSGLGYRQEFDPELVVNPELS
LAEGAILPWSRGRDTGRSYLWDRLRALAEHLGFDLKTPFKDLPEEAKRAV
LYGLPEPFEVVFRRGGKETFRVEVRYEGVIPWLEKRYQESDSEGVREALE
GFMSLRPCPACGGTRYKREVLSVKVAGRNIAEVSALPVREALAFFQGLEK
TLPPFQAQIARPILREIVERLGFLVDVGLDYLTLDRAANTLSGGEAQRIR
LATQVGSGLTGVLYVLDEPSIGLHPRDNQRLIRTLKRLRDLGNTLIVVEH
DEETMRAADWIVDMGPGAGIHGGEVVAQGTLEDILKSPQSLTGAYLRGEK
RIPVPKERRKGNGKWLVLKGARAHNLKNVTLRIPLGRFVAITGPSGSGKS
TLVHDVLYAALAQRLMRAKTTPGPYEALEGVEHLDKVIEIDQSPIGRTPR
SNPATYTGVFDEIRDLFAKTPEARKRGYGPGRFSFNVKGGRCEACGGDGT
VKIEMLFLPDLYVPCEVCKGKRYNKETLEVKLRGKSIADVLDMTVEEALD
FFQNVPSIARKLQLMVDVGLGYMKLGQPSPTLSGGEAQRIKLATELGRKA
TGRTLYILDEPTTGLHFDDVAKLLSVLHRLVDAGNTVVVIEHNLDVVKTA
DWVIDLGPEGGDRGGEIVAEGTPEEVALTGSPTGAFLARIPEIAARIGVA
AD
>gid:443753  TTHA1449  putative hydrolase, TatD family
MTDTHAHLDFLEPEELAEAAAHLPKLRAVLTLGVDPGRWEKTLSLAQGNV
YAAVGLHPTSAHLLSPEVEEALRHYARSERVRAIGETGLDYYWTPETRAA
QLKALDFQAALAEALGLPLVLHVRSKDGKAEEDLAAWLLLHRPKRAVLHA
FSGHPALEAAGLEVGAYFSFAGPLTYRKNAALREAAARLPEDRLLVETDT
PFLPPEPFRGKRNRPHYVRFTLEKLAEARGLPFAEAEALTDRNARVCFGW
P
>gid:443775  TTHA1470  replicative DNA helicase DnaB
MEGRIPPHSLEAEQSVLGAILLDYQVLDEIEGLLPTPEAFYAEAHRKIYA
AMQGLRAEGSPVDLVTLAEELSRRGELDGVGGISYLMQLSEATPTAAYAE
HYARIVAEKWTLRRLIQAAGEAMRLAYEEAGSLDEILDQAGKRILEVALA
QTEVEARSMRELVHETFEHIEALFQNKGETAGVRTGFKELDQLIGTLAPG
SLNIIAARPAMGKTAFALTIAQHAALKEGVGVGIYSLEMPAAQLVLRMMC
SEARIDMNRVRLGQLSDRDFSRLVDVAGRLSEAPIFIDDTPDLTLMELRA
RARRLRSQHNVGLIIIDYLQLMSGPGGGQKGENRQQEIAAISRGLKALAR
ELGVPVIALSQLSRAVEARPNKRPMLSDLRESGSIEQDADLVMFIYRDEY
YNPHSEKAGIAEIIVGKQRNGPTGTVELQFHAQHVRFNDLAKEP
>gid:443826  TTHA1521  conserved hypothetical protein
MDARKGRVRIPRARVGEEALGLRLAHHLVLFRARLLLSREDPLGALERAA
LALPWPELEEAGSFRVEARREGEHPFTSPEVERRVGEALHRAYGVPVDLK
RPAVRVRVDVRGEEAFLGVQLTERPLSRRFPKAALRGSLTPVLAQALLRL
ADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAA
LASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFRLYRD
FLRGALALLLPGGRVALLTLRPALLKRALPPGFALRHARVVEQGGVYPRV
FVLEKL
>gid:443830  TTHA1525  DNA repair protein RecN
MGGMLRRLEVQNLAVIREAALDFAPGLNVLTGETGAGKSLLVDALALLLG
GRAEGLIGPYGESLLVTAFFEGPPGEAVLSRRVGARSTPRVDGEVVTLKE
LQAEAERRLSLHAQHTALALLSPRRQREALDALLPEGLLAAYQEAYARRE
ALLKEKAALEESLKARAEREDLLRYQIREIEEARVRPGEEEELLALAERL
RHLETIRERLARALALLTEREAQDLLALAAKEVRAAARHDPALEALAEEL
SGAAEAVRAVARELEDHLEGLDLDPEELDRVEARLSLLERLKRKYGPTLA
DVLAHAQKAREELARMEGGEERLSEVERLLKALHEEVEARGQALRRAREE
AARRLTEGMVRELPALGLAGARFAVVLEPLPEPGPQGLEAVAFRVAPNPN
LPPAPLEALSGGELSRVALALALLTGTEAPTVVFDEVDAGVGGETAWRLA
ERLKRLAERRQVLVVTHLPQVAAVAQRHFRVTKTPEGVRVEPLAGEARVK
EIARLLSGAYTQAALAHARELLEAQGAL
>gid:443842  TTHA1537  conserved hypothetical protein
MKAKPKATRKRTSQKRAKAFTGVQALLLFPSGEDHKATLDLMRRFSAAPR
YAYNRLLEGWSREALKRENGPLCTFFRLNTRYADDAVMKAQALLDSARER
GEDPRKVVFGGRRLFETLRRRHLSGKPLKEVKREWKEKRQGLLYSRGDKT
KGGNLNLRLFVKDGALWLRINLGDGGYAHALIQTKHPNLSTLLQRVYASL
PYNVELSLKEGKVYATFTWEEEPAPLVATKENGVLALDVNSDPYHLALAL
VSPDGNLRRHLTLSLEEVDRAPNKGAKELVLWKIAHEVVSLAEEHGVAVA
TERLKHLPKGRRGDGSGRAFRRKQHRFAYASLLRKVHSLAGKKGVQVVEV
NPQDTSTIGMLKYAPQLSLSKDVAAAYVIGRRALGFKEKLPKGYGKLLQD
LSFRDHVQGFYASRVQELRAKRSAEPNPYLRRRLSQELERAKRHLSLLSS
LQGSPGSRREVTDGRNSPGVNPWRVHKVASLTRVGTFLPLLGREVPRDLS
LLKPILFGGSWEGWRGGLGPHPGGGPECANVRST
>gid:443845  TTHA1539  putative phage integrase/recombinase
MRGTITDWAEAWLLDCRARGLSPNTIGYYRDAVKAMVKVVGDKPMAELTA
DDLRAFLVKSFEDGLSPGGVAARWRAARAFVRWAVKEGALGVDPTGKIRP
PKVPEADLPVVREWEVKKLLAAAEMGKNPLRDKALVMVLWDTGLRASEVL
GLRVSDVKAEAVRVRRKGGAVQWVPVSLPTYRAILAYARAERPPSDHDAL
FLTRSGLPLAYDGLKMVLRRLAEYAGLPPKPPHAFRRGAAVAMVKNGMPS
YALQAMLGHKSPVMTAHYVRLAEKDLREIHRTASPVIGLIKRQ
>gid:443855  TTHA1548  excinuclease ABC subunit C (UvrC)
MRAQDLPPLPETPGVYLWKRGEEVLYVGKAKSLRARVKSYFHAEGKARRI
AEEATGLDFIATRDEVEALLLEANLIKAHRPLYNVLLKDDKHYPFLKLTN
EPFPTLLVVRRVEEDGAKYYGPFPEAGALRRIKTLIDRLFPLRKNSGYPM
KRRRYPCLNYSMGRCLAPCVGKADPEAYQEVVRQVEAVLEGRVDGLLQEL
EAKMREAARRLEFERAAEIRDQMEALRAFFSTDQQAFDPEMGDLDFLGMA
RSGALAVVQLYQVRSGRILGRISRVVEKEEATDEEILWAFLRDHYLEASP
LPPLVLLPFPLEDLESLAELLKRRAGRKVELRVPKKGEKARLLELAERNA
RLALETELKLRERRGEHPALKALQDLLGLPARPWRLEGYDISHLQGQARV
FSIAVFEGGRPKRQEYRRMRLKAGNDDYAAMEEGVFRRYTGSLKDLPLPD
LLLIDGGVGQVRAAARALERAGLRLPLVGLAKGEEVLVTPEGRELRLPLT
HPALQLLIHLRDEAHQNGLRYHRKRRSEELFRVLQGIPGIGEKRRRLLLE
RYGGLRALKEAPLEELARLPGMSLEAARALKAALAEEEPA
>gid:443863  TTHA1556  ribonuclease H (RNase H)
MNPSPRKRVALFTDGACLGNPGPGGWAALLRFHAHEKLLSGGEACTTNNR
MELKAAIEGLKALKEPCEVDLYTDSHYLKKAFTEGWLEGWRKRGWRTAEG
KPVKNRDLWEALLLAMAPHRVRFHFVKGHTGHPENERVDREARRQAQSQA
KTPCPPRAPTLFHEEA
>gid:443871  TTHA1564  putative methylated-DNA--protein-cysteine methyltransferase (Ogt)
MWLPTPLGPLWLEVSPLGVRRLEPALYPRGPEAEGALALRVREAVQAYFA
GERPDFLDLPLDYTGLSPARLRLYERVRLVPYGRTVSYGALGRELGLSPR
AVGAALRACPFFLLVPAHRVIHADGRLGGFQGQEGLKLWLLRFEGAL
>gid:443890  TTHA1583  site-specific DNA-methyltransferase (adenine-specific) TthHB8I
MLFPPSLPPTASGRSLGRVETPPGLVRFMVGLAEAPKGGRVLEPACADGP
FLRAFREAHGTGYRFVGVEIDPHALDLPPWAEGVVADFLLWEPGEAFDLI
LGNPPYGIVGEASKYPIHVLREVKGLYKKTLSTWKGKYNLYGAFIEKSVR
LLREGGTLVFVVPATWLVLDDFSLLRSFLAREGRTEVYYLGEVFPGRKVS
AVVLRFRKGGKGLALWDTRRDGETFTPLLWSEKPEWKGEIIRFETGWTRE
MEASGPPLGSLFHIRFAARSPEFKKHPAVQKEPEPGLVPVLTGRNLKPGW
IDYESNHSGLWMPKERAKELRDFYATPHLVVAHTKGTKVVAAWDEKAYPW
REEFHLLPKEGVELDPLFLVEWLNSDKIQEYVKTLYRDFVPHLTLRMLER
IPALLPRKGNTERRKHGPYTSPESAGSF
>gid:443893  TTHA1586  DNA gyrase, subunit B
MSYDASAIRVLKGLEGVRHRPAMYIGGTGVEGYHHLFKEILDNAVDEALA
GYATEILVRLNEDGSLTVEDNGRGIPVDLMPEEGKPAVEVIYTTLHSGGK
FEQGAYKVSGGLHGVGASVVNALSEWTVVEVFREGKHHRIAFSRGEVTEP
LRVVGEAPRGKTGTRVTFKPDPEIFGNLRFDPSKIRARLREVAYLVAGLK
LVFQDRQHGKEEVFLDKGGVASFAKALAEGEDLLYEKPFLIRGTHGEVEV
EVGFLHTQGYNAEILTYANMIPTRDGGTHLTAFKSAYSRALNQYAKKAGL
NKEKGPQPTGDDLLEGLYAVVSVKLPNPQFEGQTKGKLLNPEAGTAVGQV
VYERLLEILEENPRIAKAVYEKALRAAQAREAARKARELVRRQNPLESDE
LPGKLADCQTENPEEAELFIVEGDSAGGSAKQGRDRRFQAILPLRGKILN
VEKAGLSKALKNAEVRAMVSAIGVGIGGDGEAHFDLEGLRYHKIIIMTDA
DVDGSHIRTLLLTFFYRYMRPLIERGHVYIAQPPLYRLQVGKKVEYLYSD
EELQARLKELEGKHYEVQRFKGLGEMNPEQLWETTMNPEKRVLKRVELQD
ALEASELFEKLMGQEVAPRREFIEEHARYAELDI
>gid:443901  TTHA1594  serine/threonine protein kinase
MALLLAALLVLLTALLAVRLPAWASALLLGLLAGSGYALGVRSEALPAGA
LLLLGALAAPRLYLGPRRRKRPERRPPGPKRPAAAGTTAEREALSQRYEI
LEKVGLGGMATVYKAKDRKTGRLVALKVPQERFLGDPRFVRRFHREAEVL
TRMDHPNIVKVYDHGQVEGVHYIAMEFLDGEGLDKLIEERRLSLRQAAAI
LARVADALKHIHAQGIVHRDIKPGNIMVLKGALREDGVDPRGVRLMDFGI
AAGRVLTRLTITGARIGTPVYMSPEQAKGQKLDHRSDIYSLGIVLYEALT
GQPPFTGGYETVIHQQIFQMPTPPKQLRPEIPQALSDLVLRMLEKDPAKR
PGLDEVVRVLEGPWEEERELPEAQYLLVAVEAKKGAVRLLDLEGTPARLL
SGVGSGAGQFPSPPLAVAADPEGGIWVAVFQHGERLVHRLSPQGEVLLST
GPYGMKPGEFLLPVGLAVLEDQVFVLDGETATVSRLDLAGRYQGRFGGQG
LGRGTFQDPKALVAAEGHLFVLDYGNRQVQRLTPEGGYLSRYAFRRSRED
GALRLLGGLGVGEGRLYLYDVEAVKVRVLDLSGRLLASYPLPLLEGEDRM
SLVELLPVGRVLYAARRGSSRIHRISLDTGEALPPLEVYAPVRGLALWRR
TP
>gid:443907  TTHA1600  RecR protein
MRYPESLLKLTRALSRLPGIGPKTAQRLALHLAFHKEEAEALAEALEGIK
RVRACRECGNLAEGELCPICQDEDRDRSLLAVVESVADLYALERSGEFRG
LYHVLGGALNPLEGIGPKELNLEGLFRRLEGVEEVVLATSMTVEGEATAL
YLAEELKKRGVRVTRPAYGLPVGGSLEYADEVTLGRALEGRRPV
>gid:443952  TTHA1645  MutS2 protein
MRDVLEVLEFPRVRALLAERAKTPLGRELALALAPLPREEAEKRHELTGE
ALSYPYALPEAGTLREAYGRALAGARLSGPELLKAAKALEEAMALKEELL
PLKNALSQVAEGIGDHTPFLERVRKALDEEGAVKDEASPRLAQIRRELRP
LRQQILDRLYALMDRHREAFQDRFVTLRRERYCVPVRAGMAQKVPGILLD
ESESGATLFIEPFSVVKLNNRLQALRLKEEEEVNRILRDLSERLAKDEGV
PKTLEALGLLDLVQAQAALARDLGLSRPAFGERYELYRAFHPLIPDAVRN
SFALDEKNRILLISGPNMGGKTALLKTLGLAVLMAQSGLFVAAEKALLAW
PDRVYADIGDEQSLQENLSTFAGHLRRLREMLEEATSHSLVLIDELGSGT
DPEEGAALSQAILEALLERGVKGMVTTHLSPLKAFAQGREGIQNASMRFD
LEALRPTYELVLGVPGRSYALAIARRLALPEEVLKRAEALLPEGGRLEAL
LERLEAERLALEAERERLRRELSQVERLRKALAEREARFEEERAERLKAL
EEEVRAELLKVEAELKALKEKARTEGKRDALRELMALRERYAKKAPPPPP
PPGLAPGVLVEVPSLGKRGRVVELRGEEVLVQVGPLKMSLKPQEVKPLPE
AEPGKPLLAKPRREVKEVDLRGLTVAEALLEVDQALEEARALGLSTLRLL
HGKGTGALRQAIREALRRDKRVESFADAPPGEGGHGVTVVALRP
>gid:444086  TTHA1776  hypothetical protein
MPRPPGNRPTRAQARVGVGSDLGRGQRPHDEPLEDQVEGQVDGELEPEVG
GPREAQGPEDHDHRHGRRHDQGGPEEDPGKVGEELPEGLGPAGLPLLQGL
LL
>gid:444119  TTHA1806  MutM protein (formamidopyrimidine-DNA glycosylase) (Fpg)
MPELPEVETTRRRLRPLVLGQTLRQVVHRDPARYRNTALAEGRRILEVDR
RGKFLLFALEGGVELVAHLGMTGGFRLEPTPHTRAALVLEGRTLYFHDPR
RFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAFPGFFRGLKESARPLKAL
LLDQRLAAGVGNIYADEALFRARLSPFRPARSLTEEEARRLYRALREVLA
EAVELGGSTLSDQSYRQPDGLPGGFQTRHAVYGREGLPCPACGRPVERRV
VAGRGTHFCPTCQGEGP
>gid:444131  TTHA1818  RecA protein
MDESKRKALENALKAIEKEFGKGAVMRLGEMPKQQVDVIPTGSLALDLAL
GIGGIPRGRIVEIYGPESGGKTTLALTIIAQAQRRGGVAAFVDAEHALDP
LYAQRLGVQVEDLLVSQPDTGEQALEIVELLARSGAVDVIVVDSVAALVP
RAEIEGEMGDQHVGLQARLMSQALRKLTAVLAKSNTAAIFINQVREKVGV
TYGNPETTPGGRALKFYASVRLDVRKSGQPIKVGNEAVGVKVRVKVVKNK
LAPPFREAELEIYFGRGLDPVADLVNVAVAAGVIEKAGSWFSYGELRLGQ
GKEKAAEALRERPELLEEIRAKVLERSDQVVLAAGEDEGE
>gid:444142  TTHA1829  conserved hypothetical protein
MRVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRRE
GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFTTKLA
QERLKHAPKRLRRDKGKLDELAAVVLLEDYLARGI
>gid:444173  TTHA1860  DNA polymerase III delta prime subunit
MALHPAHPGAIIGHEAVLALLPRLTAQTLLFSGPEGVGRRTVARWYAWGL
NRGFPPPSLGEHPDVLEVGPKARDLRGRAEVRLEEVAPLLEWCSSHPRER
VKVAILDSAHLLTEAAANALLKLLEEPPSYARIVLIAPSRATLLPTLASR
ATEVAFAPVPEEALRALTQDPELLRYAAGAPGRLLRALQDPEGYRARMAR
AQRVLKAPPLERLALLRELLAEEEGVHALHAVLKRPEHLLALERAREALE
GYVSPELVLARLALDLET
>gid:444180  TTHA1867  transposase
MFNRGAHLSTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQV
HGGRRNGYYPRKLETTFGQVDLKVPRDRESRYYPAFLKPYARRLVDVGEV
AVALYAAGVSQRKAAEILSLLLGHRYSHETLSALTDEVLEAAGAFRTRPL
PEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPT
ESALGWEGVLGELWQRGLRRVLLFVTDGLPGLPEAIRRVYPQAEWQRCVV
HGVRWSLSQVRSRDRALLAEDLRRVYGAESREEALGALEEVKAAWGSRYP
GVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIRELRRGTKVRDHK
FPKEEAVYKLLYLESERQEGRWAERKLKGFSEVKEVLEKMLQERYAPRTQ
TLTHNS
>gid:444193  TTHA1880  MutT/nudix family protein
MELGAGGVVFNAKREVLLLRDRMGFWVFPKGHPEPGESLEEAAVREVWEE
TGVRAEVLLPLYPTRYVNPKGVEREVHWFLMRGEGAPRLEEGMTGAGWFS
PEEARALLAFPEDLGLLEVALERLPL
>gid:444197  TTHA1884  probable ATPase
MREVEPLAERLRPRSLDEVLGQPHLTGPQGLLRRMLEAGRLSSMVLFGPP
GTGKTTLARLLAEGVGRPFLRLSAVEAGLKEVRQAVEEARAKGGLVLFLD
EVHRFNKAQQDALLPHLESGLLTLIGATAENPAFALVPALRSRLRFFPLR
PLEEADLLALLRRALEDPRGLPGTPYEEEALRVLAQAAGGDARFALNTLE
LAASFGRVDLKSVREALGAERFGMDREGDRFYDLVSALHKSLRGSHVDAA
LYYLARLLQGGADPRYLARRLIRVAVEDVGLADPLALRLAVAAKEAYEAL
GSPEGELALVEAAVYLALAPKSNSLYAAWKKAQEAAKAHPEAEVPLNLRN
APTGLARALGHGEGYAYYHEDKEGSFAQRYLPEGLEGLTLFEATGEGWEE
RVRERLKALRERFQTARRRRG
>gid:444205  TTHA1892  excinuclease ABC subunit B (UvrB)
MTFRYRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVI
EALGRPALVLAPNKILAAQLAAEFRELFPENAVEYFISYYDYYQPEAYVP
GKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPRE
YRARNLVVERGKPYPREVLLERLLELGYQRNDIDLSPGRFRAKGEVLEIF
PAYETEPIRVELFGDEVERISQVHPVTGERLRELPGFVLFPATHYLSPEG
LEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPG
VENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDY
ARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSG
RVVEQIIRPTGLLDPLVRVKPTENQILDLMEGIRERAARGERTLVTVLTV
RMAEELTSFLVEHGIRARYLHHELDAFERQALIRDLRLGHYDCLVGINLL
REGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYADR
VSEAMQRAIEETNRRRALQEAYNLEHGITPETVRKEVRAVIRPEGYEEAP
LEADLSGEDLRERIAELELAMWQAAEALDFERAARLRDEIRALEARLQGV
RAPEPVPGGRKRKRR
>gid:444212  TTHA1898  A/G-specific adenine glycosylase (MutY)
MEAWRKALLAWYRENARPLPWRGEKDPYRVLVSEVLLQQTRVEQALPYYR
RFLERFPTLKALAAASLEEVLRVWQGAGYYRRAEHLHRLARSVEELPPSF
AELRGLPGLGPYTAAAVASIAFGERVAAVDGNVRRVLSRLFARESPKEKE
LFALAQGLLPEGVDPGVWNQALMELGATVCLPKRPRCGACPLGAFCRGKE
APGRYPAPRKRRAKEERLVALVLLGRKGVHLERLEGRFQGLYGVPLFPPE
ELPGREAAFGVRSRPLGEVRHALTHRRLRVEVRGALWEGEGEDPWKRPLP
KLMEKVLRKALPLLAHAGVVPLPDA
>gid:444257  TTHA1939  MutT/nudix family protein
MRREILVAAAILLDSRGRVLLVGNDWGRRGRVRYTLPGGTVEPGETAVEA
LVREVREETGLRVRSVEHLAYVIQVEDRRKNERTLAMAFRATYEGLLNPR
DPDGHIVEARFFTLEEVEERLKGHLPLLEPLRAYLRGERGRFYAYAGWHA
PGVVV
>gid:444265  TTHA1947  MutT/nudix family protein
MAVPLLGEHLLFTLRSPRLPTHAGQVSFPGGVVEPGEGVVEAALREAEEE
VGLKGVEPLGFLSPTYSPQGFLVQPVVVFREDLPPLKPNPEEVAEILLAP
LGELLEVEPWSEVRLGRIVWHFPWRGVDIWGVTGNILKAFLEVWREGKSP
PHELL
>gid:444270  TTHA1952  DNA polymerase III holoenzyme tau subunit
MSALYRRFRPLTFQEVVGQEHVKEPLLKAIREGRLAQAYLFSGPRGVGKT
TTARLLAMAVGCQGEDPPCGVCPHCQAVQRGAHPDVVEIDAASNNSVEDV
RELRERIHLAPLSAPRKVFILDEAHMLSKSAFNALLKTLEEPPPHVLFVF
ATTEPERMPPTILSRTQHFRFRRLTEEEIAFKLRRILEAVGREAEEEALL
LLARLADGALRDAESLLERFLLLEGPLTRKEVERALGLPPREALAEIAAS
LARGKTAEALGLARRLYGEGYAPRSLVSGLLEVFREGLYAAFGLAGTPLP
APPQALIAAMTALDEAMERLARRSDALSLEVALLEAGRALAAEALPQPTG
APSPEVGPKPESPPAPEPPRPEEAPDLRERWRAFLEALRPTLRAFVREAR
PEVREGQLCLAFPEDKAFHYRKASEQKARLLPLAQAHFGVEEVVLVLEGE
KKSLSPRPRPAPPPEAPAPPGPPEEEVEAEEAAEEAPEEALRRVVRLLGG
RVLWVRRPRTREAPEEEPLSQDEIGGTGI
>gid:444285  TTHA1967  competence protein ComEA-related protein
MRVEALGKVAPLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGRPYA
RVEDLLKVKGIGPATLERLRPYLRP
>gid:444291  TTHA1973  chromosomal replication initiator protein DnaA
MSHEAVWQHVLEHIRRSITEVEFHTWFERIRPLGIRDGVLELAVPTSFAL
DWIRRHYAGLIQEALGLLGAQAPRFELRVVPGVVVQEDIFQAAPAEAPRP
KLNPKYTFENFVVGPNNSMAHAAAVAVAESPGRAYNPLFIYGGVGLGKTH
LMHAVGHSVAKRFPHLRIEYVSTETFTNELINAIREDRMTEFRERYRSVD
LLLVDDVQFIAGKERTQEEFFHTFNALYEAHKQIILSSDRPPKDILTLEA
RLRSRFEWGLITDIQPPDLETRIAILKMNAEQRGLRIPEDALEYIARQVT
SNIRELEGALMRAIAFASLNGVELTRAVAAKALSDIFAPRELEADPLEII
RKVADHFGLKPEELTGSGRKKEVVLPRQLAMYLVRELTRASLPEIGQLFG
GRDHTTVLYAIQKVQELAESDREVQGLLRTLREACT