Gene list
Applied filters:
COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: pMP118
Number of genes found: 21
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Lactobacillus salivarius subsp. salivarius UCC118, UCC118 >LSL_1780 Transposase ISLasa9b, IS200-IS605 family MKKMSDLEYHYGLKMRIYPSTNQKKIIKINGNIARTVYNKMVAIDQELYK LKQVKLPIDIVKERIKELKSRKNARNLSNHYQYMQDKNIDSLAKANAIQN YQKAWKMFRKVHSSGTPKFHKKSYRLSYQTNAQYGKDAKMDVYSASVKFL DKNHISLPKLGRLRVSGSHRRIIDNKDDIRIGTVTISKDTADRYFVSMQL GSDTPFVKKLAKTNSQVGVDLNTENFLTDSFGKVVANPRYYRTIKGKIAK AQKVLSRRQRRAKKEKRSLRDSKNYQKQRVLVAKLHDRVRNQRDNFLNHV TTALINNHDLVVVENLRSKNMLKNHALAISISDVGWRSFLQKLDYKANLY NRTVISVNPKNTTQTCYACGFIMGTNGTDKLNLRDREWTCPNCHEHHIRD WNAAKNILAKGLDKLEKPKNLAKAK >LSL_1874 Transposase ISLasa4v, ISL3 family MDNNIKLLLGITDPNLTIDPKYQYTSYIEEKIIKNSKTLLCHLYLSYPMY CPNCKALMLHNGTKVANNVHLSSAGKKLVLSIRKQKYLCPECKKTATAKF KDTNYHDHFSNAVKAKLVRDLSLSRPMCEIAADSFTSSNTIIRSLESVEN NFKVNRNWLPSHLSLDDFKSGKRFSSSGMSMCLINAVNHRIIDIIPERNN KFLRNYFIQYSYKARLSVMTITVDLYAPYRSLIKKLFPNAFIIADKFHVV AQAYTAMNKIRTRVMKEYGAGTHEYRALKRFWKLLLKNQDNVDYHRYYPR INFKYAELSDSEVLDRLSDMSSELKTAYEYYQLLLQMYRKNSCQSLNLLI DTSSWNLPPEMRQALKTIKKHKAEIENSFVLPRLTNGPIEGINNHIKVIK RIAYGYNNFKHFRLRILLSLKNNVIFFST >LSL_1830 Type II restriction-modification system methylation subunit MAKSIEEKVEEHYKDRLKELGITYYGKTQASQLNESIANALKEAPSKSGG SGNNYPDIMLMLKSRKLNRYIPVMIEAKGGKNKLEKLDKEGNIEQVKLWD SDSKEGAKNPHKKGDPNFNSIEKYAVNGAYHYAKIILEDEHCNYDEVIFI GVNGTKLTKNNEVADPEHKVYYLSRSNKMQPKYVKDLNKSWDLMKADNLE SLFDVVDKLTLSEEELETLTSKTEDQLEKAVKKIHQEIYDNASLRNVLTT NEKLYLFSGLIMAGLKTDGIVQLKLEKLDGNIDDDDNDGTTILKKISSFL KKRNSNNYKVKMVMDLLSPIFTKKVLWENNNGESLIKHIFTDIHSEVIPL LESDLQLDFTGKILNSLNDWVSIENDKQNDVVLTPRYVTKLMVKLTRTDM NSYVWDTAMGSGGFLVSAMDEMFKDAKEKIQDKKKLEEKIEHIKKEQLLG VELLGNIYILAVLNMILMGDGASKMKNGDSHKIYDDLEFPANVFLLNPPY SADGKGFNFVAEAFSKMQKGYGAILIQENAGSGTGLPYTKKILDYNTLVA SIHMPNDLFNGKSSVQTAIYVFKVNEPHNVKKAVTFIDFSKDGYSRQNRK KSSQEVNLRDTDNAKARYQEVIDHVLGNIPDTKYYTEANGKLIKDRITLE GNDWTFSQHVVIDPMPTEEDFKKTVADYLSWKVSQLMQDGVDNG >LSL_1826 Hypothetical protein MCIRSHILTVVVEIQLYGLDPDNKVGTLHKHNYDIYDSNNDLSSELKIGN LNRVIGYDKLCTDILRELKDTDNREQVNTLLVRITNPENSGKKRAYLFTH DAYYDNEITPEMRKEAAANPDYMIQVNDWQRINFKYYEQRQLRNQAVDSI SDYLEDTYNLTLQMQYEVDIEAQTHAKSWQTKKNINKATLDAMEKSSLKQ DFKDLELDNDVDIDKFKKLEPEIRETVKFLPQSTNDEKPILRFRKLGNHH ATGLFVPFNNTLAVDFRSYESKSEYRPSGIGIESFIHEYGHFLDYNANNS ELSKNGQTRQYANRFKHILSMQDDFKEILHQTQHEIQNRVANGLKMSSHF INYYTTPTEVYARAFEVYSSEIGLQNSLLKDKSEYKNSLIYSFFTDNTIK KIVNYFDNKFPDYRQRVQEYNQTLEERTQYEQKIKINSKSVENAEQQDLN LDLNESDNDKKLETEKQELDNSAKKLVDELKKDTNKKQDKTEEKSKTKDN NEKEVITKKGKKYLKLVLNSISRENLELLSQKIKDYTESTGLRPTGYFSS EALAEFATKVDLQNKLENSDIGDKLNILGTEFTVKKQEMQSIMSSSGRAV GVELSYIDAEGNKQNVILPSDDGNLAAQYLVSAFSINIIEPKVNKEILED NKSIQNKKDNNSKKNEKQESSSKEDAPEKKYESYKTKRAKEKLARLEKEF SEATKNIYDHYKQANGQPMNDKRGGNAFFNKANKLDEKAKKLSTEIEKQK ELIEKLEWQDENKALGLNKQGGLIMSVDNIPRIKAEIEKAKKGESHYNQA TIRKYKKELSKLEEIAKLAETPLSPGAKKLVDDNIIKQWKKKPSIYFVNH LRGVALELTEKGNFQVSQKYTPKDDESKAAVEEILEKQNKIDKASNIQNS KVEKEHKNQKETPKQGKQLQVINKLKTFIEEKINNTLSTSQETLQLFSDM QKFNNYSARNQLLILAQRPNATGVRTFDQFKKDGSHVKKGEKGIKILKPV EHEVFQRADKSVVDVFKATASEKEAIKNGNLKTQKKLYYKLQTVFDVSQT NVPKEEYGRYTNQKDNVLENTDLKTINQGLREVATDLGIKIYTYGKDDAA TIRREPDRIGYYIEDESIIIQPQSMTDKEENETLLRGITSRLETKISDDF SKELWGKVVLKDYDQVQDNYLNNLKQLSTKEQVSIFEKVAKLNTRFSTML ADKVREVSTGTIPFNQGRGFIAPSVAKER >LSL_1788 Transposase ISLasa15, IS3 family MLKRIGLSKSGYYRHKFKGLSKSKERQLKIKDLIMEIWEESQHLYGAPKI TAKLRKMGIQISERTVGKYMKELKIRAKYCKPFTVTTRDSNLNNKLKNTL DEQFNPEAPDTIWCIDTTYIPTKEGFVYLTSIMDLFSRRIISWDLSTTLE TTNIISLINKVKATRKSNPKIIHSDRGSQFTSKEYCEITAGITRSYSKKA YPWDNACIESFHAIIKRECLNEYNISSYNKARRLVFSYIDGFYNTVRIHS HCGYISPLEFEQTYFDKVQKVNKAA >LSL_1787 Transposase ISLasa14, IS3 family MPKKTYTDEFKTDAVNYYYDSGLSINTTAKKLGVSISALRKWIKLSKKDG SVITRGSGNYSSDKDKEIVRLKRQLRDAEGAIEVLKKAISILG >LSL_1957 Transposase ISLasa2b, IS1223 family MDQIRVDQQNLPKKERYGIGELLKTIDLKRPTYYDERKRIINKNDKYADV KVVIKEIAEKGKWRGSYIYGYRRIMPLLEKAGYHMAEATLRRLMNELGVQ PAMYNRRKNNHYSSYKGTVGKVADNLLNQTFDATSPFTVLHTDVSQVRLG DSTWAYMSVILDQATKEVLAASVSQSSNKLLIMDTLSQLEDNLPNNFNPI IHSDQGWHYQLDYYREKIDSLGLIQSMSRKGNCLDNAPMESFFHLFKVES QPEIKKCKNISQFTQFFNKYVNWYNNDRISNKTKNMSPVDYRTHVLAA >LSL_1818 Hypothetical membrane associated protein MRIFDRFKKNKAERLEDNFQVRYIFSPDFDLENNKEIEKLYTKVVTAQDQ REELTLADTAPFATFAMIEELFNELRTYITETGTSIQFEDFAIWAYDKNK KYKLGKSGDDGNPFEFLTLSDFELDYEYQNLSKVIFESIFNDPENEDFDY DEKLKICNEIKETYMLSTKKTEREIARLPSMDEAEKGTVILNVPMFSMQQ SVKDQVPQYDPLTHTFSQTQTPQAEKAVETVSKKDNLEQQNQNVTKKETT NVNKKENITPPRNMNNARNSNNKLGRRTQHQQIQQRADSEELYARKQGSI AIPQFEIQNVDNVEVGQKGYVEYKENEFKKNLNQRLKTIGIRINNENAKT ILERRNSYQNLTKKAANKYISEHKSILDNLEQKVREEMLAKSNSEIETMK ARLLEKQETDLAIAEQNYNQKVAAIKADYQDKIKAQSAEIRSTYEDKAYQ KYNIEYKQKKNELNRASQKIWQENSKKFDIKLREDIAQLKMDSADTLSKL FKSYQDELEEYHNRILTENLNAKKIMIAEQQADNESKKVAAPYDEIQQKN KALANLNADYQAVLAERDSLLKSKQDLKTDNETLRRRNDQLADAQSKQVD LVSKKVDSMDTKQPDYFQQWMQIQMAQQVQSQSKQQDEKQEDVSDKNENI NLKNSVKLARRLAASAFALLILLGSGAGYFTYHTVQTNNAKLASLDSQLS EAKKVSNKKSNVLTQDQVNKKAIQALHDNNLTALNKYSSETFYSLDKAII EGKKDEVVKAIKSMDENNLNLQDRYRASLTESLLRQANQTSLADKVQEQN KWLKN >LSL_1758c Modification subunit MDKDLEERLAAKDSYITIHDFYVLMAFYQSISQKVLRKFDKDGSILEVQK KYEESRETVQDAQFVIAPQDTYYHHYQMYKANKFEYVELVKSLYNIEEKN PKLKNIFQDVRGSTSSLPSETAFEKVDSRNEVSFEENLEIIKRSSGAKDN YDYTSKNIRKLITKLVGSKKEGVSIYDPALGTASLLLGINQAALKENRYY GQDISTQAIKTAIMNVIVNDVDDDKFEFKNENTLANNWEFGKVDIVVSDP PINMKWNVDRNLSQDRRYRDYGEMPNKADWGFILDGIDKLSDNGMMVVSV VQGTLFRGAKEYNIRRKLLEDGKIRAVIQLPGNTKLSTTIATCLLVFRKS SEDKDVFFINASQEYEKKGLENILTEANVDKIVDTFNEKKEVQRFSHMAN YEEIEKNDFNLSVARYVNQYKFKEKLDYQEEIKNLEKLDEKLSQTDATLK NLMGDLGLMEINDQK >LSL_1743 Transposase ISLasa12, IS607 family MEQTVNIKVKLNILEPNVGMKFSKTMEQYRLACNYVSEYLFNNNFPLNKN EVQKVIYNTIREKFNLKSQMAISCIRSVIARYKTVKTQMARRPYNYQDQN TGEWYREVRDLTWLHKPISFNRPQVDLQRNRDWSYLSSGQLSINTLDGRV KVDPICRGFNQYLDGTWKFGLAKLLKSSGKWYLHISATKEVTDFDKQAVK HVVGIDRGLRFLVTSYDEQGKTAFFDGQAIMRKRAKYQKLRAILQAKGTK SAKRRLKKLSGRENRWISDVNHCLSKTLVQKYGANTLFVLENLNGVSFER TDLPKALRNQNKSWAFYQLEQFLTYKAHLNNSEVVEVSAKYTSQRCPKCG VIKKDNRNHEKHEYHCDNCGYRSNDDRIGAMNIQLLGTQYISGQEQPKFE LATNA >LSL_1958 Transposase ISLasa1b, IS1223 family MTKYTQKFKLDLIQEYLDTGCSQRCLENKYSLPKDTLKKWWTVYNLKGPE GLKLRHFKRKFTVDFKLRVINYYLNNDVSMSKVAASHNLLCSQISIWLKL FMEGGSEALKPKKKGKPSKMSKMTKKDARKILKKESDEIAALKSELRQVK MERDILKKSLTLFGPSKPRRKQ >LSL_1779 Transposase ISLasa8b, IS200-IS605 family MTNKIKDAIYTKRYVYNLHFHLIWCTKYRNKTFTNEKLSNEMKDILQRVA DDNEIVIEKMEVMPDHVHMLISFPPRKSAVDVIKALKGRSAFLFLQTHPE IRQKQYWGGHLWSSSYYLGSLGSMSKDVVERYINDQKYNAYKK >LSL_1762 Hypothetical protein MIFRDEILIKYSQGQRFPLEEYNIVSKKGLLLEFGEDFNYKLKKFKDANL PLFHVDESRLMRKYFKAKEANLALYRIIDDENFDDKYLLFKETLNRYIDF SEFIDAKNDAKWLSEILRRCRVVEQSIENIMLYSIGKTGKILREDYIKRT NTRLKNLPIDENFKQEFIRILDEIKDSVYEKNEIDILLRKEEETLIDLNV LQVELYVKDAIQDSQDEQTKRTAKEIGRSINRIRKKYDEYTDIRKEYLQL INIYRSKNPELISDLEKISDGQIILPAAVEKEYTKMTDKYNNLPKLNKDE NKIVRYFMLRHKIKIPGEGIKQGYSLSASLEKFKRVKDYEVKKLLLEYLI LRVKLIEEVIGFKQQNIRDMYFRAIEIISKYDVYSYNKNSSIELYDIGFL TNNSIGNNNINLGKDVKILKYKLESIIAKSKQKDLIRGILNELVKIYKKT ETPTMDILNILGKIVARESTFYYGEMHNSSNLWKQEFINFLYKVNYYYVG NKLSNDFSKADKTILNKNLEFLVFIDEVVKPGLETGILSKEERIKVHRKK LIKKVKLIYGKSKKSKSIYGENKRVNKDKLGKYFYGIRRNLSAIDTLSGY GNLQRSERTEKLLSKRLNISSKKVEMIRKILEKYPQRDSVDFKREIESLP IPKDMQERIIFFEVNKKDIREIKDAFEIKNKLVIK >LSL_1758b Hypothetical protein MKLNELVKIESGINSVRVKDQNHTLYTIEDVNYDLGHGEDYQHDKASGKS ITARGDIVINTVSNLASVVHSRNAGKMLNQIFLRLNILDENTLDPWYLCY LLNKSEYIRYQEAAIMDGSVIRKLTKANLEDLEINLPEVVDQKKMGKAYK EIMKKYTLAMEKAELERDLYLQMLGEKDLNNREAV >LSL_1893 Sorbitol operon transcription regulator MNVLNYQLFKILTTNDSITVDRLVSELQVSKKTLQKYITSLNEELGEIAE IQEKNQKYYLKVEDYARLAKFQTHYLKTTLDFNNPLKRQAYILLMLIKSK GYMLLDDLSEYLMVSKGTINRDIKEIKLLLKDYDTTIRSVSNNGVMLESK ADCQIAFILRNFVCDYYDLGEKLAIEEKQEITKLVRKYNKSKTVRNLIIR HLKILNFLHEHGRKISTTPDCYYELTSSEVNNEIISILKKYLHSEEITEA EKSFLLIPLNINYSNRNTERINKRLMWIDELFAEIFSQVKENISLDIDYN RVFEQIKYHSIFMINRSATYMRNDDLFSREIVEKYPVAVDLAIMTVNLLE SKLNIKISDKELGYLALYYQMEIEDEKRGNPQYHKVAIVGEVSKSIQNLI ISRLNETFQGTTEADIFKSSESFKKSSERYLIVFSTLPLESKDVTTPIVR IQSIFKNDELVSKVTLSQVMAGISSQQVKFRIQRFEERISYLKAVENLID TEISTGELLPGFKLDWKKREEKMSNVFQNGIAIPHMVDKSNNSRILLTVG ILSKAVKYQGKEVRIIFLIGIPQNLNSKLSKILSRVYDLIFMISGYDEIY NNLLEYDMDLPLTQITEGI >LSL_1781 dps, Non-specific DNA-binding protein / Iron-binding ferritin-like antioxidant protein / Ferroxidase MTENKATQERTPQERLQEEQEHKEHVHHTKINAAAIADHLLGNMHTLHVK LHQYHWYVKGANFFTLHEKFEELYNENEKWFDKLAERLITSGHKPASTTV EFEKYSILSEDAVNKYSKAEDMVENIIEDFRSTRDLTIRAIRLAQDEGDD ALEDTLIAFKNDLDKNIWMLQAFIGKEALEDDDALDEDGD >LSL_1774 himA, DNA-binding protein HU MNKNELVEAIAEKMGATKKEAEAAVSAFTETVKEALVDGKKVQIIGFGNF EVRERAARKGRNPQTGKEIEIPASKVPAFKPGKGLKDAVNK >LSL_1824 topA, Topoisomerase-like protein MVDYLILTEKPSAAENFSTALGGKNGIFDGKTFKIVHARGHLLTLAEPEN QVDPSLKEKYKSWDPETIPWNLSNLSWRRIPIRNAGSILNSIKDAAQKAK AIVIATDNDPSGEGELLAWEIIEYIGWNGSVLREYHDDETPKSIRKAMSN LKDVSDKNQDGEYLKGLVRNKWDFSSMQLTRLATSYAREAGFNVKVANQG RLKSVIISLVKERLDEIKNYVKKPYYEAKFKDENGHIYARKIKKDDEEQL NLVRHKSKEDAQNELSMYSSSPIGDVVRKTTTQAPPALLDLASLDAILSK RNYPSNQVKTVYQKLYEKGYVSYPRTEDKFITQEQFKEFSENADKIAALV GVNTNLLTHREARSSHVKSSATHGANRPGSNIPENLAEFNQIFDKERDCE CAKDIYTVLARCTLAILAEDYVYEEVKASLLEYPAFETKFNIPKKLNYRK IYNPTAIKKEKDVGTNAVPFVFEGANSKPKVPTKKWLYAKLRNYGKYGVG TGATQQNTMSEITNSKANAYLLTDKQGKLDLTDQGMIAAVLCEKTYIASP NITIRLFEMMDEVGNFKREPQDTIDTVTKVIIHDKPIFKENVTKLVDVLG KPKKSNNYITAKFNDEDIKFKNSWGKYTFTKEEIDLLSKGEPISFTYKGS TVTGRLKKQIYEGHEYWGFSPDEKKSINENNYTFAEINGEKIKFKNKWGS HIFSESEIQALIRGETITFDYNGTEKSGKLEKQKYQGHEYWGFKSK >LSL_1758 xerC, DNA integration/recombination/inversion protein MPRKSTKLFHKYYKEWIELYKKGAVRHATLIKYELAHKHVKELCPDLHLH QIDRKNYQLLLNKFAENHKRETTLDFHHHLKPCLVDAYEDGIIRVNPTRK AIIKGNQKRKKKQKFLNMDELQALLSELNLSSEVNWDWFIYLISKTGLRF AEALALTPADFDYENQQININKSWNYKFKDYGFQPTKNKSSNRKIFVDNS TLKAFKKLIKEKDPDQPIFVNQDQKIFNSTVNSRLATLYRHANIPTISIH GLRHTHASLLLFQGVSVLSVSRRLGHANITTTQETYLHIIKELETKDNRK ILKHLKEL >LSL_1797 xerC, Integrase MQKEVANKKIDELLHELPYYMNDFVIVKTADEYSPNTILEYLKNFHQFLI WLIENHYVNENKTSDIAPESLDKLTVRTATEYKSYLLRRKKQNKKALDKN GHKEESTETLSKVTIQRNITALKVIFKFLSRSANNSQEKPFLTHDVMQSI DNVADKQTLQARADALEEKLFLDDETDEYLQYIKEVYPQSLSTQAKKFYN RDVERDLAINALMLGSGLRLSEVVNINIEDLDFENNRVAVLRKGNKKDSV RIAAFAMEYLANYRDIRASRYRADKYEKAFFLAISRGGSKRITGSAIEKM VSKYSKGFKVRVTPHKLRHTLATRLYKQTNNLVLTAQQLGHSSTATTTLY THIDNDETTDALNSL >LSL_1833 xerC, DNA integration/recombination/inversion protein MATRTSTKLFYKYYRNWIDLYKKGAVRHATLIKYELAYKHVRRLCPDLHM NQIDRKSYQTLLNKFAETHERETTLDFHHHLKASLTDAYEDGLIKVDPTR KAIIKGTQKRKKKKKFLNKNELEALIHELNLSPEINWDWFIYLVSKTGLR FAEALALTPSDFDYKNKQIIVNKSWNYKFKNYGFQPTKNKSSNRKVFVDD NTLKAFRKLNKRKDPNQPIFVSQGQKIFNSTVNSRVETLCKHANIPTISI HGLRHTHASLLLFQGVSVLSVSQRLGHANVTTTQETYLHIIQELETKDNR KILKYLKTL