Gene list
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COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 20
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Photobacterium profundum, ss9 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PBPRA1017 | Hypothetical DNA polymerase III, subunits gamma and tau | SubName: Full=Hypothetical DNA polymerase III, subunits gamma and tau; | chromosome 1 | CDS | 83222 | 2262 | + | 0.455791 |
NA | PBPRA1219 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 327557 | 1566 | - | 0.458493 |
NA | PBPRA1117 | putative holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome 1 | CDS | 195866 | 1014 | + | 0.432939 |
NA | PBPRA1114 | putative crossover junctionendodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome 1 | CDS | 192891 | 522 | + | 0.455939 |
NA | PBPRA0979 | putative transposase | SubName: Full=Putative transposase; | chromosome 1 | CDS | 38148 | 1731 | + | 0.363951 |
NA | PBPRA1116 | Putative holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome 1 | CDS | 195158 | 687 | + | 0.429403 |
DING | PBPRA1011 | putative ATP-dependent helicase, DinG family | RecName: Full=Probable ATP-dependent helicase DinG homolog; EC=3.6.4.12; | chromosome 1 | CDS | 76620 | 2079 | - | 0.412698 |
NE0134 | PBPRA0980 | hypothetical transposase | SubName: Full=Hypothetical transposase; | chromosome 1 | CDS | 39841 | 951 | - | 0.378549 |
PLU1779 | PBPRA1228 | hypothetical helicase IV | SubName: Full=Hypothetical helicase IV; | chromosome 1 | CDS | 343138 | 2085 | + | 0.420624 |
RECR | PBPRA1019 | putative recombinational DNA repair protein | RecName: Full=Recombination protein RecR; | chromosome 1 | CDS | 85875 | 609 | + | 0.456486 |
S1535 | PBPRA1070 | putative ATP-dependent helicase, DinG family | SubName: Full=Putative ATP-dependent helicase, DinG family; | chromosome 1 | CDS | 145388 | 1944 | + | 0.445473 |
SF0729 | PBPRA1118 | Putative excinuclease ABC subunit B | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome 1 | CDS | 197987 | 2025 | + | 0.422716 |
SF0851 | PBPRA1164 | putative ATPase protein | SubName: Full=Putative ATPase protein; | chromosome 1 | CDS | 265150 | 1341 | + | 0.447427 |
T1718 | PBPRA1202 | putative deoxyribonuclease | SubName: Full=Putative deoxyribonuclease; | chromosome 1 | CDS | 307293 | 792 | + | 0.421717 |
VC2058 | PBPRA0947 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 3665 | 459 | + | 0.437909 |
VP0151 | PBPRA0998 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome 1 | CDS | 61586 | 1890 | - | 0.414286 |
VV13001 | PBPRA1201 | hypothetical DNA polymerase III, delta prime subunit | SubName: Full=Hypothetical DNA polymerase III, delta prime subunit; | chromosome 1 | CDS | 306404 | 915 | + | 0.413115 |
Y1045 | PBPRA0975 | putative methylated DNA-proteincysteine methyltransferase | SubName: Full=Putative methylated DNA-proteincysteine methyltransferase; | chromosome 1 | CDS | 35999 | 366 | - | 0.418033 |
YPO3127 | PBPRA1010 | hypothetical primosomal replication protein N`` | SubName: Full=Hypothetical primosomal replication protein N; | chromosome 1 | CDS | 75950 | 552 | - | 0.423913 |
Z0836 | PBPRA1039 | putative SeqA protein | RecName: Full=Negative modulator of initiation of replication; | chromosome 1 | CDS | 112018 | 549 | + | 0.408015 |