Gene list
Applied filters:
COG category: Replication, recombination and repair
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 151
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# Vibrio parahaemolyticus RIMD 2210633, O3:K6 >gid:497607 VP0011 chromosomal DNA replication initiator DnaA MSSSLWLQCLQQLQEELPATEFSMWVRPLQAELNDNTLTLFAPNRFVLDW VRDKYLNSITRLLQEYCGNDIPNLRFEVGSRPVSAPKPAPTRTPADVAAE SSAPAQLQARKPVHKTWDDDPQAIAAINHRSNMNPKHKFDNFVEGKSNQL GLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNAKVV YMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEE FFHTFNALLEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPEL ETRVAILMKKAEDHQIHLADEVAFFIAKRLRSNVRELEGALNRVIANANF TGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRR SRSVARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLRE ESHDIKEDYSNLIRTLSS >gid:497608 VP0012 DNA polymerase III, beta chain MKFTIERSHLIKPLQQVSGALGGRPTLPILGNLLIKVEENVLSMTATDLE VELVSKVTLEGDFEAGSITVPSRKFLDICRGLPDDAIITFVLEGDRVQVR SGRSRFSLATLPANDFPNIEDWQSEVEVSLSQADLRTLIDKTQFSMANQD VRYYLNGMLFEIDGTTLRSVATDGHRMAVSQTQLGADFAQKQIIVPRKGV QELVKLMDAPEQPVVLQIGSSNVRAEVNNFIFTSKLVDGRFPDYRRVLPQ HTNKTLIASCDELRQAFSRAAILSNEKFRGVRVNLAGSEMRITANNPEQE EAEEMLDVTFEGDPIEIGFNVSYVLDVLNTLRCEKVQVSMSDANASALIE NADDDSAMYVVMPIRL >gid:497609 VP0013 RecF protein MPLSRLIIQQFRNIKACDIQLSAGFNFLIGPNGSGKTSVLEAIYLLGHGR SFKSSLTGRVIQNECDELFVHGRFLNSDQFELPIGINKQRDGSTEVKIGG QSGQKLAQLAQVLPLQLIHPEGFDLLTDGPKHRRAFIDWGVFHTEPAFYD AWGRFKRLNKQRNALLKTASSYRELSYWDQEMARLAENISQWRSLYIEQM KTVAETICQTFLPEFEIQLKYYRGWDKDTPYQEILEKNFERDQSLGYTFS GPNKADLRIKVNGTPVEDVLSRGQLKLMVCALRVAQGQHLTAMTGKQCIY LIDDFASELDSQRRKRLADCLKETGAQVFVSSITENQIADMLDDNGKLFH VEHGRIESN >gid:497610 VP0014 DNA gyrase, subunit B MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDE ALAGHCKDIVVTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHA GGKFDDNSYKVSGGLHGVGVSVVNALSEKVVLTIHRGGHIHTQTYRHGEP EAPLAVVGDTDKTGTQIRFWPSAETFSNTEFHYDILAKRLRELSFLNSGV SIKLIDEREADKQDHFMYEGGIQAFVQHLNTNKTPIIEKIFHFDLEREDG ISVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRAALTRTLNSFMDK EGFSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAV ESAMGEKLSEFLVENPSEAKMVCSKIIDAARAREAARKAREMTRRKGALD LAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGK ILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDA DVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKKGKQEQYIKDE EAMNQYQVSLALDNASLHVNAEAPALAGEALEKLVQQYNAGIKLADRMSR RYPRALVHELIYTSRLTAEQCHDAAAVEAWTKQLVEQLNAKEVGASQYSY EVELHAELGLSLPKIIVRTHGVTHEHALSVDFLNSKEYGKLADLSEVLDG LLEEGAYIKRGERTLPVSSFAEALEWLVKESMRGLSRQRYKGLGEMNPDQ LWETTMDPETRRMMQVTIEDAVGADQLFTTLMGDQVEPRRHFIEENALKV ANLDV >gid:497643 VP0041 ATP-dependent DNA helicase Rep MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNI AAVTFTNKAAREMKERVGQTLGKAESKGLMVSTFHTLGLNIIKREYKQLG LKAGFSLFDDQDQMALLKELTEKQLDGDKDLLKQLLSTISNWKNDMLTPE QAKAMAKGEQQQLFAFCFEMYQKQMKAYNALDFDDLILLPVLLLRNNEDV RQRWQNRIRYLLVDEYQDTNTSQYELVKLIVGERGRLTVVGDDDQSIYSW RGAKPQNLVLLGQDYPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK SLFSEIPDGEKLKVLLAKNEEHEAERVTGELIAHKFLNRTEYRDYAILYR GNHQSRLIEKSLMQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDN AFLRIVNTPRREIGPVTLEKLGSYANMRGKSLFEASFEMGLEQHLSGRGL ENLRRFTQWLVAIADQAERGNTVEAVRSLVRDIHYEDWLYETSASPKAAE MRMKNVSDLYSWIVADLEGDNYDQEEKTLKEVVQRLTLRDMMERGEEDED SDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNVEEERRLMYV GITRAQRELTFTMCKERRQFGELIKPTQSRFLDELPFDDVEWEVNKKPVS QEERMAKGQAHIANLRSMFKK >gid:497664 VP0057 hypothetical protein MQLGSSETQVYYHLLDLDDSQKQQYLQELQQSQPELYIQLAPLLAHEAPE ERLTQLLYFGAHQATNSEIDLSGEVISKYRLTHELGRGGMGVVYAAQRAD ETFEQDLAIKFIQSNLSNVLGQRALFDEAQLLARLNHPYIAKVFDGGLHD DSVYIVMERVFGQTLDDYLAEVTLTDREKLTLFKQICQAMEHAHHHHVLH ADLKPENILIDPNKRPKLLDFNLTQKVQSNGGESPPALIAFSQNFASPEQ QTGQFLTAQSDVYSLGKILAMMFPSPRVWSDVYWVIRRATRSAAKLRYSD VRALRIDIERMLERRPIEQKKHWPLYSTLRLVQRRPLAAALSAILVLSGV LFGNALIQKNIQLQQEKKIAEDMMYELTRLIFHAKGQNVEHLSVNSMMEL TRRRILSNPDIPKHIKQKMLLAMMTPVPEKHLTTPMSCQPNCASKDSTNQ >gid:497709 VP0103 conserved hypothetical protein MIDTHAHIYASEFDNDRDEVVERALTQGITKILLPNIDLDSIEPMLQTEA AYPEVCHSMMGLHPCYVDSNVDQTLEIIRGWFEKHNFIAVGEIGIDLYWD KTYRAEQEMAFVTQLNWAKEMDLPVVIHTRDSIEETLTLLRQEQDGRLRG VFHCFGGSLEEARAINELGFHLGLGGVSTFKNGGMDQVIPHLDMQWVILE TDCPYLAPVPHRGKRNEPAYTSLVAQRVADLRGEEVATIDAITTENAKSL FKI >gid:497714 VP0107 DNA polymerase I MASIPENPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMM RQFASERIAVVFDAKGKTFRDEMYSEYKANRPPMPDDLRCQIEPLHNVIR AMGLPLICVPGVEADDVIGTLAYQASQQGMPVLISTGDKDMAQLVDDNIT LINTMTNVVMDREGVVEKFGIPPELIIDYLALMGDKVDNIPGVPGVGDKT ATALLQGIGGLTKLYENLDDIAALGFRGSKTMAKKLVDNKDNAMLSYELA TIKLDVELEETPESLLKAEPNKDELIKLYGQLTFKSWLNELLEGGSGTVE AVELAGSAQASSSSSSHAEMETSAVTIDRSQYETILDEASFNAWLEKLKA AELFAFDTETDSLDYMVANLVGLSFAIDEGIAAYVPVAHDYLDAPEQLDR DWVLEQLKPILEDDAQAKVGQNLKYDASVLARYGIEMKGIKYDTMLASYV YNSVGGKHDMDSLALRFLQHSCISFEQIAGKGKNQLTFNQIELEQASPYA AEDADVTLRLHNRLFANIEQDEKLKSVYEEIEMPLVPVLSRIERTGVLID DMKLSAQSVEIAARLEELEQKAYEIAEQEFNMNSPKQLQAILFEKMGLPV VKKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMI NPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPAG YKVLAVDYSQIELRIMAHLSGDQALLDAFRDGKDIHAATAAEIMGVSIDQ VSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQAYMDKYFERYPGV MQYMEDTRSAAADKGYVETIFGRRLHLPEIKSRNGMRRKAAERAAINAPM QGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESSLSEIE SKVQKLMESAAELKVPLVAEAGHGDNWDQAH >gid:497753 VP0145 MutT/nudix family protein MSKRTPPEILSCQTVARSKLFAVEALDLRFSNGEHRTYERMKPSGRDAVM VVPVTEQGDLLLVREYAAGTERYELGFPKGLIDPGETPHQAADRELKEEI GFGCKELTPLKQVILAPSYFSSKMTLFLGQSLYPEKQEGDEPEPLEIVRW PLAQAEELLTHLDFCEARSITALMLALKHLPNTTHNNNQ >gid:497765 VP0157 ATP-dependent DNA helicase RecG MSAQMLSAVPLTSLSGVGAKVAEKLAKVGLHSVQDLLFHLPLRYEDRTRI YPIAKLHAGLWAAVQGKVMTVDTIFGKRKMLTVKISDGNGTITLRFFNFT AAMKNNFSQGKLVHAYGEIKRGGMGLEIVHPDYKFYASEQKPDVEQSLTP VYPTTDGLRQITLRNLTEQALALLDKAAVQELLPSGLYNHQITMSQALHT IHRPPPTINLDEFDEGKHPAQIRLIMEELLAQNLSMLAVRSKGQQDIALP LAPCDKLKKQLLAQLPFSPTNAQARVVKEIESDLEKPHPMMRLVQGDVGS GKTLVAALAAVRAIEHGYQVALMAPTELLAEQHAINFANWFEAMGIQVGW LAGKLKGKAKETELARIASGEAQMIVGTHALFQEHVEFHHLALVIIDEQH RFGVHQRLELREKGAKQGAYPHQLIMTATPIPRTLAMTAYADLETSVIDE LPPGRTPIQTVAIPDTKRDDIVERVRNACLNEGKQAYWVCTLIDESEVLE AQAAADTAEELQRKLPDVKIGLVHGRMKPAEKQAVMQEFKDNKLHLLVAT TVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGSVASHCVLLYHS PLSKTAQKRLGVLRESNDGFVIAQKDLEIRGPGELLGTKQTGLADFKIAD LVRDQRLIPEVQRIARHIHDNYPTNAAAIIDRWLGERDIYSKA >gid:497775 VP0167 hypothetical protein MTLKEFGVSAVTAAILSVSGAAIAADSGTVVANQAQTTKSSQASQQKIDT YAESTEGMLAEYKGLLRQIDSMKVYNEQINRMVQSQQGELDSLNNQIAQI DQTATEVVPLTLKMIDALDEFVTLDLPFQKDERNKRVQELRRLMDRADVT TSEKFRKVMEAYQIEEGFSRSIESYKASLDRNGEIVTYDFLRIGRTALLF QSPDGGETGMWNQQTRQWETLPESYRIAVQQGLRIAKKQAPPALIKLPVF AGEE >gid:497792 VP0184 DNA repair protein RadC MILKALPNESMPREKLLQRGPQALTDAELLAIFLRTGTQGMNVIELADFL IQDFGSLRQLFSASEQEFCQHKGLGQAKYVQLQAVLEMTQRYLAETLKRG DALTSPEQTKLYLSSILRDRQREAFYILFLDNQHRVIKDEILFEGTLDAA SVYPREVVKRALHHNAAALILAHNHPSGVAEPSQADRRITRRLIDALALV DIRILDHFVIGDGESVSFAERGWI >gid:497797 VP0189 formamidopyrimidine-DNA glycosylase MPELPEVEVSRMGISPHMVGQTIKAFVFRTPKLRWDIPQELKLLEGQVIR NIRRRAKYLLIDTDQGTAIVHLGMSGSLRVLDADFPAAKHDHVDLKLTNG KVLRYNDPRRFGAWLWCAPGESHAVLEHMGPEPLTDAFNSEYIADKAQGK RVAVKQFIMDNKVVVGVGNIYANESLFKSRILPTRQAGQVTPQEWVLLVE NIKATLKIAINQGGTTLKDFAQADGKPGYFAQELLVYGKAGEPCPECGEP LQELKIGQRNTFFCNECQQ >gid:497804 VP0196 conserved hypothetical protein MIQQYRDSNQVIWFDEELIEDPSQPIFDAEYWQSTNKVTGSASGRGTTWF VQLDTMQAALRHYRRGGLFGKLVKDNYLFSGWEQTRCAQEFQLLLTLINA GVHVPRPIAARAVKSGLTYQADLLSERIPNARDLVSILQEKPLPEGMYQK IGQEIAKMHNAGVNHTDLNIHNILIDDKDKVWIIDFDKCRKQEHGDWKKQ NLERLLRSFKKELLKRQIHWKERDFAVLTEALSCLDIK >gid:497816 VP0208 putative integral membrane protein MLNKNIIIGHLDHIFLNLYIDILINYCKCKETDLCIVSLDEDNYTKSLHL GVPVVHYKSIDASDLDVSKSITAISLNKNNAFYLEEVIRKTNSKNKIFIH LTDDEVDRWVKTKDIFGKLKPTKDNHVDKHVLYVINNIKNVIAPECYFKD KLKYLFDNRSFNFIDGRDAFKSLPSKLWEELSNLYDGNSSHTKPENRILL GGKKEVFSLSDVISIINFLIFKSKIDNLKLMVFTDSRRKRYRLWLDFYLS CLRRVKRCKVDISYPTPTNSIAYNAMILSCSHFVLQNRGSLSTARSYISM GVGRVYVMKDSPNDIELTMAEGVDVGRYVDYRELAIKIADNRIDVKKNKE IINSRFKLKYKNLSSIYN >gid:497861 VP0253 primosomal protein N' MRPSIARVALPVPLDKQFDYAIPGHLFPIIGGRVSVPFGRQTLVGIVTAM VNHSDFPKDQLKPIKAVLDSQPVWPEKLYSLLIWCSQFYQYPLGDTLHNA MPAALRKGKPADFATLQEWQITESGKDKLMQGLDRRAIKQQKVLQMLVNG ALPHQEFVDQEITSTVLKSLEDKGWIERIEKKPAITQWGQHVECDVEKPK LNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIKPVLEKGKQAL VLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNETERLNAWLSARDKAAGI IIGTRSALLAPFADLGIIIVDEEHDTSYKQQDSLRYHARDVAVMRAHKEQ VPIVLGSATPALETLHNALSGKYHHLTLTQRAGSAVPTSNKVLDVKGQYL ESGLSAPLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCD AYYTFHQYSNEIRCHHCGSQQPVIHQCQGCGSTQLVTVGVGTEQLEQQLA QLFPEYKAIRIDRDSTRRKGSLEDALDSIRKGEYQILIGTQMLAKGHHFP NVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH HPEHSLLQALLEKDYRHFAMTALEERKLAQLPPYSFLTLFKAEANQSEIV EDFLRQVRFTLESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLIQTQHRS LMQKLLTSAKPAIELLPNAKKVRWNLDIEPQDLS >gid:497896 VP0288 ATP-dependent RNA helicase DbpA MSKQTFDQVGLNPALLETLDSLNYTHMTPIQALSLPAILNQRDVIGQGKT GSGKTAAFGLGVLSNLNVKRFRVQALVLCPTRELADQVAKEIRTLGRGIH NIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLEKGRINLEELNT LVLDEADRMLEMGFQDALDAIINAAPKQRQTLLFSATFPEKIEKIAQRIM KSPEMIKVESTHDTSSIAQYFYKVEGTEARDEALANLLLTYQPESAVVFC NTKKEVQNVADELHHRGFSVIDIHGDLEQRERDQALVQFANKSVSILVAT DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGLAFSFFGEK DGLRVARIEEYLEMDVVPATLPAKSNQQPYQAKMVTINIDGGKKQKVRPG DILGCLTGKNGIPGAQVGKIHLFPVRSYVAVEKSAAKKALQIISTGKMKG RQFRARLLK >gid:497988 VP0380 putative integrase MLTVTKIQSATSRKNSYYLWDQSGQRGIGRLGVKIFTSGKKQFVFRYYQQ QKEKFISIGLFSTRAGSMALTEAREKAQVFSQLLLGGKDPKLHLEQQESE QKKIDAESKSLGTIDELFHSYTERMKIDGKRTYEDVRNALVREFYPYIDR NTKACDVTTDDIKYVISKMIQRGAITQSNRVRSYVMAAFNHGMRFDNDPR YFSLESKFGIKYNPVAPIPKQKDGERIGERFLEWRELRRLLKDLRENYDL VPIGQDLRHLLQLCIYLGGQRPYEVITLEWWNVDWEEKFICITKERSKNK KDHIVPLNGLAFEILQKQYELSGGGRYVFPNPKDAEEPMKTSSICRAVTR YRDAVGFDKFVPKDLRRTCKTLMGACRISKEVRDRIQNHALQDVSTRHYD RYDYFDDKLGGLETWSSKLKELIGYVPPALSVVPSAETLPFPDIKSTQSL RANLK >gid:498002 VP0394 haemagglutinin associated protein MMNLFQDDAVTWLSTLDAASVDLLITDPPYESLEKHRKIGTTTRLKVSKA SSNQWFDIFPNDRFEALLSEVYRVLKNHSHFYLFCDQETMFVIKPIAEKI GFKFWKPIVWDKVSIGMGYHYRARHEYILFFEKGKRKLNDLSIPDILTHK RVYRGYPTEKPVSLLEVLVAQSSRDGELVVDPFFGSGSTLVAAKNLNRRF KGNDISQSAHEHIHQRMDFGA >gid:498014 VP0405 DNA primase MAGHIPRSFIDDLLARLDIVDIIDARVKLKKKGKNYGACCPFHNEKTPSF SVSQEKQFYHCFGCGAHGNAIDFMMEFERLEFVEAIEELASYLGLDVPRE QRSGGSGQFKSGPQASSSEKRSLYDLMGSIAQFYRNQLKQPSSKVAIEYL KDRGLSGEIVQKFGIGYVADEWDLVRKNFGQNKDNQDMLVTGGMLIENDK GNRYDRFRGRIMFPIRDRRGRVIGFGGRVLGEGTPKYLNSPETPIFHKGK ELYGLYEVLQAHREPAQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDH IQMLFRQTNTVVCCYDGDRAGKEAAWRALENALQFLKTGNTLKFLFLPDG EDPDSYVRKYGKAAFEQQIEQATPLSSYLFDNLIELHQINLGNNEGKSAL RAYASALIDKIPDPYFQELLEKLLDERTGFDNRLRQPRKKISETRPQPHK EIKRTPMREVIALLIQNPSYAQMVPDLSSVRDLSIPGLSLFADVLDKCQA HPHINTGQLLEHWRNSQNEALLSRLASWDIPLDEDNQEEIFLDSLDKIIA QCVEKQIENLQAKARSVGLSAEEKRELLALMLDLKA >gid:498035 VP0426 MutT/nudix family protein MQQCDKRQDEFTSRDVEIISKESVFEGFFKMVKYRFKHKLFAGGWSDVVE REMFERGHAAAMLPYDPKTDQVVIIEQIRIGALEHEHPWQLEIVAGMIDR DESAEEVIRREAEEEAGITVGRVASVTSYYPSSGGCSEKLDVFVGEVDAS KAHGIHGLDYEDEDIRVHVLSREQAYQWVKDGIFENGASIIALQWLQLNH QELRSQWGSPQIVESK >gid:498039 VP0430 topoisomerase IV, subunit B MTEQYNAGAIEVLNGLEPVRRRPGMYTDTARPNHLGQEVIDNSVDEALAG HASKVQVILHADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKF SNKNYQFSGGLHGVGISVVNALSKRVEVTVRRDGQVYEIAFEHGDKVSDL TVTGTCGRRNRGTSVHFWPDAKYFDSANFSVTRLVNNLRAKAVLCPGLEI TFTDKVNNKDYQWYYEDGLKDYLAEGVKGYPVLPEEPFTGEFSADTEAAN WAVIWQPEGGEMITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNL LPRGVKLTGDDVFDRCSYVLSVKIQDPQFAGQTKERLSSRQTAAFVSGVV KDAFSLWLNEKPQLAEQLAEVCIANAHRRMRASKKVVRKKVASGPALPGK LTDCSVQDLNRTEIFFVEGDSAGGSAKQARDREFQAVMPLRGKILNTWEV SADQVLASQEVHDISVALGIDPDSDNLDSLRYGKICILADADSDGLHIAT LLCALFTRHFRALVEAGHIYVAMPPLYRIDCGKEVFYALDDDEKDGILER LSKKKAKINVQRFKGLGEMNPIQLRETTMDPNTRRLVQLTIDDSEATMEM MDMLLGKKRADDRRSWLQNNGDLAEV >gid:498040 VP0431 DNA topoisomerase IV MSTEITYDGVEQLPMRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRI IYAMSELGLSASAKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSY RYPLVDGQGNWGAPDDPKSFAAMRYTEAKLSKFAEVLLGELGQGTVEWQP NFDGTMKEPQMLPARLPHILLNGVTGIAVGMATDIPPHNVREVADATIHL IDNPKAELPEVMQFVKGPDYPTEAEIISPQAEIEKIYRNGRGSIKMRAVW HKEGSDIVITSIPHQVSGSKLLEQIANQMRAKKLPMVEDLRDESDHENPT RIVIVPRSNRVDCDLLMNHLFASTDLERSYRVNLNMIGLDNRPQVKGLVQ ILSEWIEFRRSTVRRRLQYRLDKVMARLHILEGLLVAYLNLDEVIEIIRT EDDPKAVLMERFGITDIQADAILDTKLRHLAKLEEMKIRGEQDELEKERE KLEQLLGSERRLNTLLKKEIKADAEKYGDDRRSPLVERAEAKALTERDLV PSEPITVVLSEKGWVRHAKGHDVDAESLNYKSGDKYLAHARGKSSQPAVF LGSDGRSYSLESHSLPSARSQGEPITGRLNITAGSSIRQVIMSEEDQLWL VGSDAGYGFVCKGADLLSKNRSGKALVTLPANSEVMTPKEVGDLDSDEIL AITNQGRMLLFPIKDLPQLAKGKGNKIINIPAAKAKEREEVLSHLIALPQ GASLTLYAGKRKLGLKPADLENFRGERGRRGSLLPRGLQRVTRIDVELGE SSSTEESSESE >gid:498057 VP0448 hypothetical protein MGLFSKRQIGNQYETLAKQYLQRQGLRFLDQNYLTKFGEIDLIFQQDETI VFVEVKYRKNDHFGSAAEMVTNAKMRKLIKTAQVWLSQQRTMNTIDYRFD VIAIHDSGRDINWIQNAISEG >gid:498077 VP0468 mutator MutT protein MKRIHIVAAIIFNQDKSQIFITKRPDDKHKGGFWEFPGGKVELGETVEQA MVRELEEEVGIRVIEQAPFEHLEYDYPDKSLKFDFITVSQFENEPYGREG QEGRWVAVGELGDYTFPEANVPILQRVVKEFA >gid:498107 VP0498 endonuclease IV MTNMKNKFGNKLIGAHVSAAGGVDQAPLRAREIGANAFALFTKNQRQWVA KPLEAKTISAFKANCKMLGFGAEHILPHDSYLINLGAPEAEKLDKSRAAF IDEMERCNQLGLTLLNFHPGSHLKKVSEQECLATIAESINLAHKTVPDVV AVIENTAGQGTNLGWKFEHLAEIIEQVEDKDRVGVCIDTCHTFTAGYDLR TKEDCERTFAEFDRIVGMHYLRAMHLNDSKVEFASKVDRHHSLGKGEIGW DCFEYIAKDSRFDGIPLILETIDPDIWQQEINTLRQFHLAAINNQ >gid:498109 VP0500 uracil-DNA glycosylase MNQSPTWHDVIGEEKKQSYFVDTLNFVEAERAAGKAIYPPAKDVFNAFRF TEFNDVKVVILGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDI EGFQIPQHGFLQSWAEQGVLLLNTVLTVEQGKAHSHSKTGWETFTDRVIE AINQHQHGVVFLLWGSHAQKKGRFIDRSKHHVLAAPHPSPLSAHRGFLGC KHFSQANQLLASQGKEPINWHLPLTV >gid:498114 VP0505 ATP-dependent RNA helicase SrmB MIRTFAELDLDQNLLEAIEEMGYERPTKIQAEAIPQALDGRDILASAPTG TGKTAAFVLPALQYLQDFPRRKPGPARILILTPTRELAMQVADQARALAK NTKLNIFTITGGVQYQEHADILATTQDIVVATPGRLREYIDAERFDCRAI EWLVLDEADRMLDMGFAPTVDRLSNECRWRKQTLLFSATLEGKGVEGFTA DLLNEPAEIDAKSPLRERKKIAQWYHRADSAEHKLALLKHIITEQAERTI VFLKTRERLAELRAQLESAQIPCSWIQGEMPQDRRNNAIARFRDGTVNVL LATDVAARGIDLPDVSHVINYDMPRTADVYLHRIGRTARAGKKGNAISIV EAHDQPMMDRVARYVKEDIKERFIKEMRPKHKKPVFKKKKKKEDKKKTAK KKTAKKK >gid:498118 VP0509 integrase/recombinase XerD MTAQQPVNQQDFALVEQFLDAMWMERGLSENTLASYRNDLMKLLTWMDHH RYRLDFISLSGLQEYQTYLVDLDYKQTSRARMLSAIRRLFQYLHREKVRA DDPSALLVSPKLPQRLPKDISEEQVDALLDAPDPNDPVELRDKAMLELLY ATGLRVTELVSLTMENISLRQGVVRVTGKGGKERLVPMGENAVDWIETFI QQGRPALLGETSSDVVFPSKRARQMTRQTFWHRIKYYAVIAGIDTDQLSP HVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHSQ HHPRA >gid:498120 VP0511 single-stranded-DNA-specific exonuclease RecJ MIEIQRRPEPDLSLLPDSIPPILKRIYINRGITDIAQLETSARGLHSYQK LGGIEQAVELLFQAIQEQKRIIVVGDFDADGATSSALSVLALRMLGSNNV DYLVPNRFEDGYGLSPEVVDQALELGAEMIMTVDNGVSSIEGVRYAKENG ITVLVTDHHLPGQVLPEVDAMVNPNLDSCTFPSKALAGVGVAFYLMMALC VHMRKHNWFAQQGMQEPKLMELIDLVALGTVADVVPLDENNRILVHQGLQ RIRAGKARPGIQALIEVAKRDARRLVASDFGFALGPRINAAGRLDDMSFG VELLMCNNIHAARRMASELDGLNQTRKEIEEGMKQEAMAFCERLQFGENS ELPYGLSLFQRDWHQGVIGILASRIKEKFHRPVIAFADGGEGTIKGSCRS IPGLHMRDALDFIDTQNPGLIIKFGGHAMAAGLTIKEQDFERFSRLFDEV VKKELDEAALKGVILTDGELKPEEFSMHIAEQLRAGGPFGQAFPEPIFDG EFKVLHQKLVGEKHLKLMLEPLYKGHPTNVMIDGIAFNVDLRRWPDASVK TVRLAYKLDVNEFRGNQSLQLMIDHIEAK >gid:498127 VP0518 DNA mismatch repair protein MutH MKPEPQSEAELMERAHDIAGLSFAELADEAGMTVPENLKRDKGWVGQLLE WHLGAPAGSKPQQDFSKLGIELKSIPIGYNGRPLETTFVCVAPLTGVQGL TWETSHVRNKLSRVLWVPVEGEREIPLAERRVGTPLIWSPDKEEEQILRN DWEELMEMIVFGKFDQISARHGEALHLRPKAANAKALTEAYSSNGKPMKT LPRGFYLRTQFTEQILLKHYINVQSE >gid:498129 VP0520 MutT/nudix family protein MIDGDGYRLNVGIVICNNHGQVFWAKRYGQHSWQFPQGGIDEGETPEQAM FRELYEEVGLTKKDVKIIATSRHWLRYKLPKRLVRWDSKPVCIGQKQKWF LLRLECDESRINMQRGKSPEFDGWRWVSYWYPVRQVVSFKRDVYRRAMKE FASLAMPFRERKTKGKRKKQQRRG >gid:498151 VP0542 hypothetical protein MKKYFLVALVLLPLTASAGNVLKDTIKAKRKYDHNKHQITNTLNNTKRDI EDLTNGTYVQNKMKREVNEATSQYTNKVERVKNATDPDQIKSKVNNELNR EFDEWLYDED >gid:498184 VP0568 conserved hypothetical protein MWFKNCLVYRVNREVNFNADQLETQLAEFRFTPCGSQDKQKFGWVSAMGR HGDMMTHVSENRILICAKKEEKMLPASVIKESLNAKVDAMEAQEGRPLKK KEKDNLKDDIVMDLLPRAFSRSSHTHVLIMPKEGFILVDASSYKKAEDVL ALLRKTMGSLPVVPAIPEVAIETTLTEWVKTGNTPQGITMMDEAELKSVL EEGGVIRCKKQELTTDEIRNHIAADKVVTKLALNWQDRIEFIMTEDSGIK RLKFSDELKDQNDDIPREDQAARFDADFSLMCGEFSAFLPNLYEALGGLP NPNA >gid:498230 VP0614 conserved hypothetical protein MQQNKCPDCEVELEWTGQYHCGQCESDFKKVGFCPDCGAELEKLQACGAA NYFCNTCNELKSKSRVRFEFQKIS >gid:498231 VP0615 exodeoxyribonuclease VII, large subunit MLSKTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSAPVSGHWYLT LKDSRAQVKCAMFRGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIE SMQPEGDGRLQQEFEELKMKLAAEGLFAQTNKLPLPEHPKRVGIITSKTG AALYDILDVLKRRDPSLPVVIYPTMVQGDDAAIQIAQAIGRANSRNECDV LIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVGHEVDMTIADFVAD VRAPTPSAAAELVSRDNSHKDQSLVAKQHKLASAMRYYLSQQKQQSAQLL HRLERQHPSYQLQRQSQQLDELDMRLRRAMQRFIDTRQQAVERKHHRLQL NSPVKHLAQQKSRLERVEHKLLDTMDRKLLTMRHQLAIAAEKLDTVSPLA TLKRGYSITQTEQGKVVTSADDVKTGDLLVTRLANGEIHSTVS >gid:498254 VP0638 putative resolvase MTMTTQSNDSNSMVFAYVRVSTKEQNVDSQLSDISKLYPDAEITTEKVSG TVPARERAGLSVLLGKLRKGDTLVVWWVDRLGRDYRDAESTIRELLDRGV CIKTINQGLTFSYSSKDDDMQNMVTDIQITMLTAMAAAERKNRLASAEAG RQALKANPAKWAEKFQGRKANTKQHQRIIELLLEGKSIRGVAQELGCNAS TVQRVKKKAVEAGTVF >gid:498258 VP0642 putative ribonuclease HI MNTQLQTTHLLHNAQHPLSIYCDGSAPDNQHGCLQGGVGIAVYDALGQCV YEYSSSVRRTGGVTSQRAELLALIIALLVAGEGDNVFSDSQYCVRGFNEW LDSWKRNAWRNSSKKPVANQDLWMLIDELKAIRPRVSVEHLAGHSGIKGN EHSDRLARQAAEDKM >gid:498259 VP0643 hypothetical protein MPMKREIEVHPVLHMDGDDTLHMTQRANGNWYYQRRIPTHSQPFFGNKKS IKISLRTKSVAEARVRARQLSVEHDVLFAQHETLATTTSKPKGYASNPLE VLVDVKASQAQHKEITQATSGNLVGTQSLLHAQVFTAPLKERESVFTGIE AMRDDLCELMCDLAENRLSEYDAKLSRSWRIIEGAMASEHYEYFVEQPFE TQRQLVIESCRKSIQGLSSLTTQLTDVMAERLELPNASDTYLHELRGTQA PTESEHQSLMLSECVELYLKDREKDNMQPKTFESYKARMRLMLYILGDRP IDSLKRADALMFKDKLLQLPANLNKVSSFKGLPVDDVIALKPTPMAVSTA NDTMTGVSSFFDWCVLNEYASKNAFKGLKVKTKKKASDERSAFTESDLKT LFQHPYFQGSESKHPHYYWLPVLGLYTGARLNELCQLHVCDVRRDDESGL WTMTITNTQEDQKTKNMSSIRTIPLHPKLIELGFVDYVQNLTHERVFPEL KRGRDGYGQAPSKWFARFRDKVLPNAKNEHKAYHSFRHTFINALKQSGVS RSHASAYVGHGDGSETFGRYGKAYVASALAPILDNITFDFDIKPYVLPN >gid:498264 VP0648 DNA repair protein RecN MLAHLSVNNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRA DAGMVRQGEEKTEVSAAFLLDNNLHATRWLEDNDLLDGTECILRRIITKE GRSRAFINGSPVPLSQLKSLGQLLINIHGQHAHHQLMKSEYQMAMLDQYA GHLNLLKSTRSAYQHWRQADNNLKQLKENSQQNQAQKQLLEYQIKELNEL SLGEEEFAELEQEHKRLSNSGELAATCQQALELIYEGEEVNALGILQSAN HSLIQLAELDEKLAELPNMLADAMIQLEETKNELRSYLDGIDVDPGRMAY VEERFSKVMSMARKHHVMPDELYQHHQDLLAQIEALDCSDERLDELAQEV EQKYQSFLTQAEKLHKSRSRYAKELNKLITQSMHELSMEKAVFSIEVNNE NTHPSPLGMDSVCFLVSTNPGQPLQPIAKVASGGELSRISLAIQVITAQK VDTPSLIFDEVDVGISGPTAAVVGKMLRKLGESTQVMCVTHLPQVAGCGH QQMFVAKHTKGGQTETQMRALDEEQRVAELARLLGGSQITDSTLANAKEL LIAA >gid:498304 VP0688 exodeoxyribonuclease, small subunit MAVKKPENMTFEATIEELDSLVDQLENGDLALDDALRKFERGIALARAGQ TKLSDAEQRVSILLSEDDEAPLNDFKPDSE >gid:498313 VP0697 exodeoxyribonuclease IX MSIHLVIIDALNLIRRVHSAQPDPTDIARTITTTQRTLTRILSEAKPTHI IAVFDHHEQDRGWRAEILPDYKQNRKPMPEPLMQGLDAIQQAWWEQGIDS LLSEGDEADDLVATLATKVASHGEKVTIVSTDKGYCQLLSPTLQIRDYFQ HRWLDEPFIEKEFGVKPSQLADYWGLTGISSSQVPGVPGIGPKAAKEILT QFEDIEAAYASDELAPKYRKKLDEHIESARLCKRVAALKCDIELGFNLQD IRFTGPNKAE >gid:498341 VP0725 DNA polymerase III, delta subunit MRIYADKLADHLAKHLKQVYLIFGNEPLLIQESRQAIQKTALQHGFEERH RFAVDASLDWNQVYDCFQALSLFSSRQLIELEIPESGVTTAISKELQTLC DMLHDDIMLVIIGTKLTKAQENAKWFKALNAKGDWVSCLTPDLQRLPMFV QTRCRALGLKPDQQSLQMLAQWHEGNLFALSQSLEKLALLYPDGELTVVR LEEALSRHNHFTTFNWIDALLAGKANRAQRILRQLEAEGIETVILIRSVQ KEFNQLLSMHQDLTQMPISQVFEKYRVWQNKRPLYNAALMRLSASRICAL ISLLAQAEIKAKTQYDESVWPTIHQLSLETCSPDIKLAI >gid:498344 VP0728 conserved hypothetical protein MPKRKTGYEEMLEDVIETLKQSPEEVNKALETSGKVVEAANDLTKDELAL IAAYVKADLKEFSESYEDSKSGPFYLTVADSIWQGLLEITDRTKVEWVEL FDDLEHQGLYEAGEVIGLGTLVCDECGHKTTYNHPIIIIPCIKCGHKGFS RQSLKP >gid:498438 VP0800 DNA ligase MSESVHQRLEELKESLHYHAVRYYVEDNPEIPDAEYDRLMRELLEIEAQH PDLVTVDSPSQRVGGKPLSEFSQVTHEVPMLSLDNAFDDSELDSFHKRAQ DRIGGESIKQYCCEPKLDGLAVSLLYENGILVQAATRGDGTTGENITENV RTINAIPLKLRGDDWPARLEVRGEVFMPKAGFEKLNELARQKGEKVFVNP RNAAAGSLRQLDSRITASRPLSFYAYSVGVVQGADLAASHYERFLQIKSW GLPMCPETKRVDSLADVKTYYQHILQRRDALPYEIDGVVIKIDDIAVQER LGFVARAPRWAIAYKFPAQEEITTLNEVEFQVGRTGAITPVAKLEPVFVG GVTVSNATLHNADEIERLQVKIGDQVVIRRAGDVIPQVVSVIKERRPETA RDIIFPTQCPVCGSHVERIEGEAVTRCTGGLVCQAQRKQALKHFVSRKAL DVDGLGDKVIEQLVDREMVETPADLFKLSAGVLTVLERMGPKSAQNIVNA LEKSKLTTLPRFLYSLGIREVGEATAANLAQHFKSLEAIQAATEEQLIAV QDIGVVVAKHITTFFEEEQNQAVVQDLLVQGIHWPEVSAPEQGAELPLEG KTVVLTGTLSQLGRTEAKEALQSLGAKVTGSVSKKTDILFAGENAGSKLA KAQELGIEIKTEQDLLELIN >gid:498476 VP0838 SeqA protein MKTIEVDEDLYRYIASQTKHIGESASDILRRLLNLDGQLQVAESAPAVEK PQGIVVSKDAGKAESIDVVKEMRSLLISDEFAGLKKAIDRFMLVLSTLHK LNPEGFAQATNVKGRKRVYFADNEETLLANGNTTKPKAIPGTPFWVITNN NTSRKRQMVEQVMTHMEFQPDLIEKVTGSI >gid:498503 VP0865 ATP-dependent helicase, DinG family MIAKTFSSDGALGKAIPGFQARQPQIDMAEAVSSAIKEQSQLVVEAGTGT GKTFAYLVPALLSGKKVIISTGSKNLQEQLYHRDLPLMVNALGFYGQVAL LKGRSNYLCLDRLSRQMVESHTNESDPTLLTQLVKVRSWSSETKTGDLGD CEDLPEDSMIIPTITSTNDNCLGKECPSYTDCFVLKARKRAMDSDIVVVN HHLFLADLAIKETGFGELIPEADVFIFDEAHQLPDIASEYFGQSVSSRQI HDLAKDIEIAYRTEAKDMRQLQKVGDKLLQSAMDMRIVLGEPGFRGNWRE AMQSESIKRELVRLTDSLDLAIDVLKLALGRSQLLDTAFERANLIKGRIE RVCDVDITGYSYWYDTSPRHFTLHITPLSVADKFHEQIEIKQGAWIFTSA TLAVSGDFKHFTDRLGLKPKQQFSLPSPFDYEKQARLCVPRYLPEPNSPG LADKLVRMLAPVIEENDGRCFFLCTSHSMMRELGEKFREVLDLPVLMQGE MSKQKTLAEFMELGNALLVATGAFWEGIDVRGDALSCVIIDKLPFTAPDD PLLKARIEDCRLRGGEPFAEVQIPDAVITLKQGVGRLIRDQKDHGALIIC DNRLVTRDYGGTFLGSLPPIPRTRDLERIKAFLKAE >gid:498542 VP0903 RhlE MPFSKLGLSAPITDAVTALGYEKPTSIQQKAIPIVLRGSNLIAAAQTGTG KTASFVLPILEKLSQGETQRKKRARAIILTPTRELALQVHQSIEAYGKNL PLRSMAMFGGVEYAPQKQALIEGVDIVVSTPGRLIDLYGQRAIHFDEVEM LVLDEADKMLDMGFIDSIDKIIDCMPEDVQSLLFSATLSNPVRDLAKNAI VDPEEITIAKHSASKSNIKQWITTVDKDMKSSLLSHMLNENDWSQVLIFI ETKHGAAKLVSQLEKRGIVAEAFHSGRNQRVRQELIEKFKAGEIQYLVAT GVAARGIDIDNLPVVINYDLPFPADEYVHRIGRTGRAGAQGEAISLVSKD DFKNLCMIESRLGHLLERVEIEGFAPRKPVPISILNYVPKNKRKPQDNRP RRENSEPRDAK >gid:498559 VP0920 DNA-binding protein HU-beta MNKTQLVEQIAENADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTF SVRTRAARTGRNPKTGEEIQIAEAKVPAFKAGKALKDACN >gid:498561 VP0922 conserved hypothetical protein MYMFNMKWILTLCLVVFAPLSLAADTKADKYEGIEITVNINTASAEEIAT MLKGIGEKKAQSIVDYRTEHGPFKTAADLTNVKGIGEATIKKNEDRILL >gid:498596 VP0951 methylated-DNA-protein-cysteine methyltransferase-related protein MDQFLVQIFAVIHQIPKGKVSTYGEIAKMAGYPGYARHVGKALGNLPEGS KLPWFRVINSQGKISLKGRDLDRQKQKLEAEGVEVSEIGKIALRKYKWQP >gid:498620 VP0975 transcription-repair coupling factor MTKATILSVTNPTERGDKKQLGNLPGAALPLAIAELAKQHSSHSLLVVPD PQIALKLQAEIEQFTDQPVSLFPDWETLPYDNFSPHQEIISDRIARLYQL PNQRGGVTIVPVSTVLQRQSPRDFLLQHTLMVKTGDNFSLENLRVQLENS GYRHVDQVFGPGEYASRGSILDLFPMGSADPYRIDFFDDEIDTIRTFDPE NQRSIEDIQQIQLLPAHEFPTTKEAIEDFRTRWRTQFEARREPESIYMQV TKGTWPAGIEYWQPLFFDHTETLFDYLPEDSQLITYGDIEAAVDTFLNDV EYRYDQKKIDPLRPLLAPHDLWLKKDELFAHFKQLPQAQLSLEKVVKRAG RQNLAVQTLAELGVQQQNKEPLSRLRQFSEQFTGKIIFSVESEGRREALT ELLQGIKVRPVVQESLYHALESDHRFTLILGSAEHGFIHDELNFALICES DLLGDRVIQRRRKDKKAVNSDTVIRHLAELKPGQPVVHIDHGIGRYIGLQ TLEAGGMKTEYVTLEYQNDAKLYVPVSSLNLISRYSGGAEETAPLHKLGG EAWSKARRKAAEKVRDVAAELLDVYAKRELKPGFKFALDRGQYATFKATF PFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATD NSKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKVILQ DVADGKVDIVVGTHKLLSSDIKFKDLGLLIVDEEHRFGVRQKEKVKAMRA DVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVREREESV VREAVLREIMRGGQVYFLHNQVETIEKTAEDLQKLIPEARITVAHGQMRE RELERIMNDFYHQRFNVLVCTTIIETGIDVPTANTIIMDRADNLGLAQLH QLRGRVGRSHHQAYAYLLTPHPKAMTKDAIKRLDAIASLEDLGAGFTLAT HDLEIRGAGELLGDEQSGQIQSVGFTLYMEMLEQAVEALKEGKEPSLDDL LREQTEVELRIPALLPDDYIPDVNTRLSMYKRIASVSDSDELSELKVELI DRFGLLPDAAKNLLAVSELKFAAGSIKAKKIEAHDKGGFIEFYPDADINP AYLVKLLQSQPQKFAMEGPTKFKFSVPLADRRKRIQFVQDLLNDFKQNLL PTS >gid:498648 VP1003 exodeoxyribonuclease III MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAM GYKVYFHGQKAHYGVAMLCKQEPIRVQKGFPTDNEEHQKRMIMATFENEN GEKVTVLNGYFPQGDNINHETKFPYKRQFYKDLMTYLNDHHSNDEQLIVM GDINISPIDSDIGIGEPNRKRWLKTGKCSFQPEEREWLKTLLDWGFEDTF RKLYPEVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQKCIESGIDYE LRGIEKPSDHAPIWSTFK >gid:498650 VP1005 primosomal replication protein N'' MNIEQLSQSLEHMANQAATLDRQRGEHHVPLFDERLFSCRSRLLTPCVKE AKSTLDAIIREQNENKLTALRAEYLTERLVAQIGAIQREISTTKIRKNEI KHSSHFRKPINVLYQELAQHQEWARRLREMVLEKERAVETAPSFMRAEAQ KVLLATEQRLARCEAALLKLENQITHREKHQ >gid:498652 VP1007 ATP-dependent helicase, DinG family MLTSNIQKSIRNSYQNLQTQLDNFVPRRAQNYLVAEIAKTLCGQYHKSNR ILVAEAGTGIGKSLSYLMAAIPVAVHNNRKVVISTATVALQEQLVNKDLP LFRRITDREFSFILAKGRQRYCCAEKLATASGVDGGQLAMFETKPKKKDI ELLETMYRSLAQGKWDGDRDAWPKPIDDRIWQLIVSDKHSCNNSLPGHRG CPFQKARSELDKNDVIIANHSLVMADADLGGGVILPEPENTIYVFDEAHH LPHVARDHASASASLKGAAAWLEKLNQSISKFSSLADEKRVARFRNDLQD SVQNLIPALTQLTKQFDPAQFEEGIYRFEHGELPTWLENQSKELKQFSKK ANQSVAKIADLIAERVKDGELAARLAEPALAELGFYIQRLENLAQVWHLM AEPTREKGAPLARWLETHPDREGDFIVSVSPLEIGWQLDQQIWSRCIGAV LVSATMRALNSFHYFCHQVGIDGKPESGTQFLALASPFDYQNQAELLIPA MKYEPSAPQFTEYLIEILPKYLEDKKANLVLFSSYWQMNQVAEALSSEFI KRGWALQVQGESSRQEILKKHKKLVETNKTSVLFGTGSFSEGLDLPGELL ENLVITKIPFGVPTSPVEQAHSEYIEKKGGNPFMQITVPDASKKLIQSVG RLLRKERDSGRVTILDRRLVTKRYGQALIDSLPPFKRKIEY >gid:498667 VP1022 DNA topoisomerase I MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGEKKAA AISTKGMSAEEKARVKKEKDRKALIKKMGINPYHDWEANYQILPGKEKVV SELQKLAKDADCVYLATDLDREGEAIAWHLREIIGGDEERYKRVVFNEIT KNAIQQAFQTPGELNMDGVNAQQARRFMDRVVGFMVSPLLWKKVARGLSA GRVQSVAVKLLVEREREINAFVPEEFWDIHANTKTKDKSDFKLLVAQKDG VAFKPVNETETKAAISVLENASYEVCKREDRPTKSKPSAPYITSTLQQAA STRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVDAVRDFIGSEF GDKYLPAKPLTYGSKEGAQEAHEAIRPSDVSVKAEDLQGVDADAHKLYSL IWNQFVACQMTPAEYDSTTISVKAAEYTLKAKGRILKFDGWTRVQRPMGK NEDTILPAVQLGDKLSLESLDPKQHFTKPPARFTEAALVKELEKRGIGRP STYASIISTIQDRGYVKVDQRRFYAEKMGEIVTDRLDDSFNDLMNYDFTA RMEQKLDQIAEGEVNWKAVLDNFFADFTGDLEKAELDESEGGMKLNHIVM TDIECPTCGRPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGIIN VLEEDVETAALRAKKRCPICETAMDAYLIDDKRKMHVCGNNPNCEGYVVE YGEFKVKGYDGPVVECDKCGSDMVLKNGRFGKYMDCTSETCKNTRKILKN GEVAPPKEDPVHFPELPCENSDAYFVLRDGASGLFMAASNFPKSRETRAP LVSELARFEERLPEKFKYLTTAPQEDPDGRPAVVRFSRKTKENYVRSEDD GKPSGWTALYVDGKWEITDKRKKAKA >gid:498693 VP1048 crossover junction endodeoxyribonuclease RuvC MSIILGIDPGSRITGYGVIRQQGRHLQYLGSGCIRTSEKELPGRLKQIYA GVTEIITQFQPDVFAIEQVFMAKNADSALKLGQARGSAIVAAVNADLPVY EYAARLIKQAVVGTGGADKVQVQHMVQHMLKLPAKPQADAADALGVAICH ANTNKTLVALAGKASSARKGRYR >gid:498696 VP1051 holliday junction DNA helicase RuvA MIGRLRGILLEKQPPEVLIEVNGIGYEVQMPMSCFYELPNIGEEAIIYTH FVVREDAQLLYGFNTVKERALFREVIKANGVGPKLGLGILSGMTASQFVS CVEREDVSTLVKLPGVGKKTAERLVVEMKDRLKGWGAGDLFTPFTDAAPT DSAAASSNSAEEEAVSALLALGYKPTQASKVVSQIAKPDMSSEQLIREAL KSMV >gid:498697 VP1052 holliday junction DNA helicase RuvB MIEADRLIAPENPAFRDEDVIDRAIRPKKLADYQGQDHVRDQMEIFIKAA QLRSEALDHLLIFGPPGLGKTTLANIVANEMEVNIRTTSGPVLEKAGDLA ALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDIMIGEGPAARSI KIDLPPFTLIGATTRAGSLTSPLRDRFGITQRLEYYKVQDLQNIVQRSAD CLGLSMEPEGALEVARRARGTPRIANRLLRRVRDYAEVKGNGHICADVAD KALNMLDVDAQGFDYMDRKLLLAIMEKFGGGPVGLDNMAAAIGEEKDTIE DVLEPYLIQQGYLQRTPRGRIATDRAYLHFGIEK >gid:498717 VP1071 hypothetical protein MLSNQRLSSRKSLYLITSRTGVFTFRWNLRVNGKHHQPTLSLKTRDYLQA VKLASEIAIRIQQITLPTLEDIKSIYSDFKGSQSKKALLLQSIDISNHLT DLSIKSQTEYRNCWNSFVSALSVSTTLDSVRQSHIEQWKKTQTCSLTTMK KKLRLLSSCFGRVGHKVEQDWFKIAVEKTPVRPKRAITKQELEKLLKATQ CYKKSKDEWKYYLPRIAALTGCRLNEIAQLRVCDVHLGNEPTLNINDDHD DKKLKNSSSKRVLPVTAPLLNLLSELIAGRGKNEHLFYLPYSKQNGYAGK PSKYFSELLKSLDIKGVSFHSLRHYVVTELFNAGVKEELIGSLMGHSVGK LTTGKIYLSGFSYSNKNNALNILGVGFF >gid:498718 VP1072 putative helicase MYPVPLVGESYMPYAFKTIQSEIEGNSNLREPQIECYRELKNFYQNQLKE SEEREVGIVLPVGCGKSGCITITPFAFQSKRALVIAPGVSIASQLLRDFE PLTSFYKKCSILKGNEFPEPVEIRGKATNLSDLDESDVVVTNIQQLQGAD NRWLDKLSDDFFDVIIFDEGHHSVADTWTNLKSKFPKAVIVNFSATPERA DGQIMSGKVIYTFPVQSAIQKGYVKELTAVRLNPKTLKYVRNEDDKEIEV PLEEVIRLGEEDAKFRRSIVTSKETLDTIVNASIHQLIELRKATQNNKLK IIASALNYEHCIQVVQAYRERGLAADYVHTREDSKKNNAVLTKLNNHELD VIVQVRKLNEGFDHPFLSVAAVFSIFANLSPFVQFVGRVMRVIEQNSPRS PINQGIVVYHAGSNIAQRWSDFKEFSTADREYFDQLLPEKEYTPTESSNF ESLRPTIENDDKFVIKDQSEVSIDKSALIDDPKALEALRYLNSIGVTGDI DELLQQVDKIPVTKVRKRQAQRQALSDRVKNATGKILANLEKKPMARGLD PSFRVNNYEYVCSRLNRHINEHVGRGAGERHDFSATELDSIDSAFPEIVL FVEQGLK >gid:498721 VP1075 hypothetical protein MMSDWFIVGSILIGLCFFLKKSSEEEHRRGNENQLAILKRTAELNEKEHG SHSVLTSEAQVKLSVDEILGRAKRGLIVLANTAEYNAYEEAKFYQEHRQG CFELLLSIAIQDKHGRYAESEVMEKFVDAANKQAMKTERMFVQAGIPRSC SDWEDSGRFIFFQVALIFCAFRTDCNESFANALNTQLEKPIFHRFWEEGE ELFQDESMP >gid:498723 VP1077 integrase, phage family MSHLIHRLKDKEIEQAQGRDRIYRLPDGGGLYLLVKPNNLKYWEFRYTKP GTKNRTFLGLGSLDMLNVDGARDKAFEMRKLLKEGIDPKLDRIEKRTQIQ QEQACTFKSVADEWVKTKTKLKPKTVQGNWRKLELYAFPKFGEIPVKSLT PIIVQEAFRPIARRGKLETVKRTIQLVNEIMRFAINSGLIQHNVLSGVGE TFASPDVKHMAVLKPDELTELLQTVATANMQLATKCLIEWQLHTMTRPSE AAGARWDEIDIENRLWIIPDTRMKMKREHRIPLTDQTIAILERIHPISGH RVHVFPSMRFPKRSIDSETINKALGRIGFKDRTTAHGMRSLASTTLNERG FDPDIIEAALAHQDRNAIRAAYNRTDYLERRRKMMEWWSSYIDDAAVGSL SVTGAVHLRAIG >gid:498726 VP1080 hypothetical protein MPLQLASQLITSLSKPGFYDVLQWANGEFYRQPSILHGTAQVFFDAKIPT LKTSAGENIDQARAALFKLYQHARDTQQRYVVVVHGRPGAGKTLLGISSV AEIARSESAKQSEPIFLSGNGPLVQVLQHTLDYSGKQSVGRKGDKVIDGR VMIQDLLPFKKDLKRSLTSRRETFVVFDEAQRAWDKASPRESQSQSELML FCNWLAGQPFGVLVLLVGDGQAIHRNEMQLEQMLADLDAAIRAQNGKVIP IMPSLHAGKMQLVTPIKKDVYNLKTPIRQAYTESLDKWIEAVLSNNSEQA QQVALDIQADYPLRLAQNKQTAETYALGVQQTMHEGNKLQDAFRTGWLMS SQGGKFIEEVQKDKYKPGKHIGSWYVEPPSSENSCCQFEAACTEFSCQGL ELSLALFNWGQDMVFRNGKLVVTDRRQYEHYTEGSYRVLPSRGRSGLVIK CDDQETFEYLKKCGMQVIPERY >gid:498729 VP1083 putative ATP-dependent DNA helicase MDSIESARQIASDLHLKAIGRGVSPWNSLKFAIAEADRRDYDVEAVAAGA TVLNGSKATLIADEYLILHENSGTEFQKAFLIAHEIGHIELGDTKDNVSV EEIDPARTIEASPIGIDRVVDYSAQQRREVQMDLFAREFLLPRTWVKKLH VDDGLTATEIAEKLDAPYEVVAQQLLDALLLPAVNPGTKEGKSEVILNEQ QKHAADHRGKPYLLEAGPGTGKTQTLVKRVEGLLDEGVDPRRILILTFSN KAAGEMAERLASKNKEAVASMWIGTFHAFGLDLVRRFYSELGFEKEPRLL ERTEAVEALEDEFPRLGLEHFRNLYDPTEHITNLLSAISRAKDEVVDHRD YFRLAQEMLDSADTEESKTAALKAKEVATVYEAYERLKRAKGCIDFGDLV LLPVKFLENNVELFKHFQSLYDHVLVDEYQDVNRSSIRLLMLLCGEGENL WAVGDARQSIYRFRGASSVSMSRYCTQDFPTALQGRLKINYRSSEEIIRA YSKFAFDMSANIGSPELIADRGETGCLPEFKVVEKADDQAVVLAETIKDM QESGYSYRDQAVLCSGNERLSQLAEQLELLGVPVLYLGSLFEREEVKDMF SFLSLLTDSWGSGLVRIGRWPEFELSLEDLDVILNHLRTERCEDKGWLLD SQDITGISSSGKEALSKLGWTFEGIDKTDHPWKVLATLIFDKTRIAARLS SSEVVSDKNRSIAIWQLMNFVRTAISAETASGLPVTRLLERVRRLLRLGD DKDLRQLPASAQSIDAVRLMTMHGAKGLEFKVVHLPGMSQGTLPRTYQKP ACEPPFGMITGEDDTSVTMLKAEHEKEQECLFYVSMSRAQDKLFMYAPAK KSNNSQWKHSPFISRIQDKVRTSNVVETYNLPRIDLDTDMDIAVDRDFIF ESNHLGLYQQCPRRYLYTHLLKTGGKRTKTSYVKLHDAVRFVVQRHMEEG FDESELKSVVESALAINGLSEHGYIKEFTDLACSMSNYFVSSRKSMEKAT ISPITLELGGEKVIVRPDDILSEPSGRKVVRRIRTGHARKKDDSVGTAAF ILASEQAYPSAKVETLYLADELTSESSLTAKVLSNRKKTLIDIITQIRLG QFPAKRSSRSCPSCPAFFICGMVPSGSIKKKLKKITGST >gid:498753 VP1107 conserved hypothetical protein MSNYTLDFSGDEDFRPLAARMRPQTIGQYIGQQHILGPGKPLRRALEAGH VHSMILWGPPGTGKTTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKAR ENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFEL NNALLSRARVYKLTSLDKEEISLALNQAINDKERGLGDTPANFADNVLDR LAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLLAEVAGEKVSRFD NKGDIWYDLISAVHKSIRGSNPDAALYWAARMIAAGCDPLYIARRLLAIA SEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV YVAWKQALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRYAHDEPGAY AAGEQYLPPEMADRKYYQPTNRGLETKIGEKLDYLAKLDANSQQKRYEK >gid:498825 VP1179 DNA-3-methyladenine glycosidase I MTEHKTCAWAMNHPLEREYHDAEWGVPVYDDKVLFEFITLEGAQAGLSWI TILKKREGYREAFENYDLDALEQRNEERAEFIVENFDVVKHRGKINSVFS NAKAAKALITEYGSLSEALWQFVDGKPVVNQWHEMSDVPASTEQSKAMSK FLKKKGFKFVGETICYAFMQAVGMVDDHIVGCPKKQNQ >gid:498860 VP1214 helicase-related protein MYTLRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGR VLVLAHVKELVEQNHAKYEGYGLKGAIFSAGLGRKETDQQVVFASVQSVV RNLDSFKNQFSLLVIDECHRVPDDKNSSYQKVITHLRELNPGIKVLGLTA TPYRLGMGWIYQYHTRGQVRTEESRFFRDCIFELPIRYLLDENFLTPARM MDAPVLSYDFSQLKPANTGRYKEAEMDMVIDKAKRATPQIVEQIIQYARE RKGVMIFAATVRHAQEIHGLLPEGETAIVIGDTPTPERDAIIQAFKNREI KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSEGKNEC LVLDYAGNSYDLYQPEVGDPKPDSTSEIITIPCPACGFNNNFWGKLDSNG FLLEHFGRRCQGYFEDEDTGEREHCGYRFRAKYCGECGADNDIAARICHE CDATLVDPDKKLKEALNLKDALIFECTEMDLSVFKSNDGKSQLKVTYSGE PYQGEGHALVHEFWSLNTKKQKQTFKDQFVRPHLADKHRPFEEASPTRVV ANQHRFRLPQFVIARKSGRFWKLRDKIFEDELK >gid:498905 VP1259 putative ATP-dependent helicase MFQLPIDSLQAEFDQHVKHHHLVVEAETGSGKSTRLPLWAAKHGRVLVIE PRRIACTSLAEFLAEQSGEPIGNKIGYAIKLHAYFDENTEVVFVTPGVAL RWFAEDKLASFDIVIVDEFHERRWDIDLLTAILKQENQHRLIVTSATLEG EKLAHYLNAHRLCSEGRCFPVSVTHRVIDSRHLPNKKGCENDVVKTVKEA LEDEEGDILVFLPGRKEITQCAQMLQHLDDVLVVKLHASVSDEERHRALT VQAQRKVVLATNVAETSLTIPNIRIVIDSGLERRTVQRNGRTALTLTNIS KASAVQRMGRAGRVAEGTCIRLFGEHAPLELVTPPELHREELVEPMLAAA CCGYRLSELHFLDAVPEKSLNAALLCLQAMGALDDNGDVTEHGKKVYPLP IDALFADLVTRIPTKAEKEAMIDLAAALSVPAQLYQLQRGEAAEALEREE PLGCDASLMIRLVRGEQLPAVIVDTSVLEEAQGLAKQMRDVFELPQLEVA SRYRRDQLTQAIAALHPELMFVRRERRRDALGNGSMEMVVGRNSRFPDKS EAALVLDSHSVPGRGVKQTLNLASVMMPISLELIKTLELGEWHQGDTQYE DDTPLATMHLVYAGRTIFTEHQALQGEVAIQSIADMIEQEMLLPGFSPLR KQQIQHWKIYNSLGLNTELVDKKVLDELCFSAWLTEQLATLGVESVDDIE LFEADDLPFEGIPEWEYNDFAEQYPLKLVLAELKLDVEYFVSRKLVHVIY TEGNRKGDPKRWELPRWAGWKVQYKKASRVVDVK >gid:498941 VP1294 integration host factor, alpha subunit MALTKAELAENLFDKLGFSKRDAKETVEVFFEEIRKALESGEQVKLSGFG NFDLRDKNERPGRNPKTGEDIPITARRVVTFRPGQKLKARVENLKKEQ >gid:498948 VP1301 exodeoxyribonuclease I MHQDNQPTFFFFDYETWGTNPAKDRPSQFAGVRTDENFNIIGEPLVMYCQ LPADYLPSPEAALITGITPQKAMQEGLSEPEFIAKIHAELSKPKTTSLGY NSIRFDDEVTRYTCYRNFIDPYAWSWQNGNSRWDLLDVLRACHALRPEGV EWPENEDGFTSFKLEHLSVKNGIEHSNAHDAMADVIATIEMAKKVKAAQP KLFDYFFSMRHKRKLNELVDIVNMTPLMHVSGMLGRECQYTSWIVPVAWH PTNNNAVITIDLAKDPQPILELSTEELHERLYTKREDLGDLLPVPVKLVH LNKCPILAPAKTLTAENAENIGIDRQKCLDNLALLRQHPEIREKLIGLFS IERQFEKSDDVDTQLYDGFFSPADRAAMDIIRETDPNNLAALDIEFDDKR IKPLLFRYRARNFPGTLDEQEQRRWALHCREVFESQIEEYMLNLENLVHE HESDEKKIAILKSVYRYVESLAS >gid:499000 VP1353 hypothetical protein MTNIFIIVVLLVVFFIIIQKYVIKHDDTRDYPYRAKGPLLRGQEGAFFNA LRAAVGEHAVVFAKVNMSTLVAPKDIKNKKQFFVANNRIARSYFDYVICD PRTLEPRVIIEFDNGQQLNKGKAERQKLLMHVCKSANLPLIGTSVKHSYQ VGRLRRLLAAHIDLIEPEKEVRFCKKCGSPMIIKTASQGEFKGRRFFTCS RQPNCTYTENYNVVFESDD >gid:499050 VP1400 hypothetical protein MFQQILFRSNNICSIKECKVSDIQGAAKGYIDQLVVKAIEKKKLNEQRLA QKNKPKLEYVLFSQFDVLDTLPSKNGRTTVYHLAKKGQPEKQICCKVVNE DAPEVANKMLANEASRLELSQHPSVADFIKFGNEFERPYLMYEWIQGESL AEKMERYSSKGFRHDHIAWLVYQLAGALEFMHTRGICHLDIKPSNVLVSE GDYVKLIDFGAARYIGEIESHAEASLSYASPLYLETGTTEPQDDVYSLAL LSGHLFLGAIFGDAWHKQLKDRKRPALIPNHIWKLLKQVINNPRGHGYTA ISFAQQLARIDTQSIDSHSNAPIFSSLRNADLLLTHCRPQDKAGYGRFKV LEASLVLSVIAITGNYLYQQSQPEWKAIVKSEPTISKTETPLVSNIKPAQ TASFLAQPPWIIEKALNDMEKDVVSTAPYREAYQVQQMKLSALYKQNQAQ LMSYQALADDLPKELVDLRKELVLLREKLVDDGALFPYADKTLTQVMAGL NTASVNSMKISAVAGSKDERIANLILDGEAKLADEEMKAAWLLNQSEAYF YSQVLPNKVMANINDSIEQHAKDHYYTKAIEEAKAAKTYFGNAPELNKKV KDLIVARSEYILFSTVTEQSVFDKQKLHDSLADLERNAPTKFGEITDLLE SMATDSIDKSHQLSRPARGAIAIERALRDYLAEERS >gid:499086 VP1436 hypothetical protein MFPKYRHTLRLTSFMSIEKFDAIYQRAAERKGGEDQLEALLSHPLSKEEL AAIPNDRWLAAFSMKVFQSGISWSVVRKKWPNFEEVFFGFKIEPLLMLSD EQWETKATDERIIRHLTKVMSIPANARMIHEASIQHGSFGKMVADWPQEK ITELWAYLKKHGSRLGGNTGPYTLRQMGADTFILSNDVEAYLRNCKIIEG GKDTKKSHDAATQAFMQWQKESGRSLTEISQIIAFSTGDNRL >gid:499092 VP1442 conserved hypothetical protein MNHNRIVCFDLEMCCWSENGVGRTGEIIEVGLAEIDLSKGEIVKRAQYYV KPEHDEVSLFCAELTGITPRKIEKQGRPLAEVIKSMIKNFGGRNKIYASW GRDDVILLEECKQKGIEAPFTEFINLATLYRIQNRLKDKRIGHRAAQEAK GIEWEGRQHSGYVDAHNLAKLALTML >gid:499103 VP1453 ATP-dependent helicase HrpA MTSSQPPKKTPAEEQATPSNGAQKATAKQAQTPQAQVNSAASLRKALNQC MMRDRFRLSKRISGASKIKKDAARNVVFDEIALDIAKSMMVAEQRSSYKP TIEYPEILPVSQKRDDIAKAIEENQVVIVAGETGSGKTTQLPKICAELGR GKFGLIGHTQPRRLAARSVANRIAEEMETKLGEFVGYKVRFNDQISENTQ IKLMTDGILLAEIQHDRFLNQYDTIIIDEAHERSLNIDFILGYLKELLPR RPDLKVIITSATIDPERFSKHFNNAPIIEVSGRTYPVETRYRPLSGDDDN DRDQLEGIFEAVDELCDEGLGDILIFMNGEREIRDTADALSKRNLKSTEI VPLYARLSAGEQNKIFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTAR ISRYSYRTKVQRLPIEPISQASANQRKGRCGRVEEGICIRLYSEEDFESR PEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDKRNIQDGVRLLE ELGAINAEAKDAKKRLTSIGRQLARLPIDPRLARMVLEAPKYGALKEVMI IAAALSIQDPRERPSDKQQSSDDKHRRFFHEESDFLTFVNLWDYIQKQQK ALTGNQFRKQCKQDYLNYLRVREWQDVYFQIHQSMREMEFKLNDEPASYH GVHSAILVGLLSHIGMKDQEKNEYQGARNARFHIFPASGLFKKQPKWIMS AELVETSKLWGRIIAKIQPEWIEPLAKHLIKRSYSEPHWSKKRAAVMAHE KVMLYGVPIVPKRLVNYGSIDPIVSREIFIRSALVEGEWETKHAFFKQNR KLLQEVEELEHKSRRRDILVDDDELFDFYDQRVGTEVVSGKHFDTWWKKA SKENPELLNFEKEMLFKGDASHVTDLDYPNFWHQNGLKLKLSYQFEPGDD SDGVTVHLPLPILNQVEPAGFDWQIPGLRHELVVSLIKSLPKTIRKNFVP APNYADAFLARVTPMEAPLLDSLEKELRRMTGVEVLREDWNLEQVPEHLK VTFRAVDHRNRKLKENKDLHELKESLKDKVQETLSKVADDDIEQQGLHTW SFGELPKVYQQKRGGYDVKAYPALVDTKDSVEIKLYETEFEQITAMRAGQ RRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLIDDCIACGVDKL IEEQGGLVWVPEKFEALKEHVRAELGDTVVEIAKQVETILTTAFNINKKL KGKIDFTMAFALSDIKAQIESLIFKGFATECGWKRLPDILRYMRAIERRM EKLPIDPNKDRLHMLKVESVTKDYKELLNKIPKGMVIPENVKEIRWMIEE LRVSYFAQQLGTPYPVSDKRIKNAIDAC >gid:499127 VP1477 DNA ligase MPLKMTLIALAVMASAQPQANTPIAPPVSLAETYQDGIDVSEYWYSEKLD GIRAYWTGQHLVTRNGNRIYAPEWFTESLPNYPLDGELWAGRGNFHIVQQ TVLDKTPIDSAWREIDFMVFDMPYSAGDYRKRYYNIQDLVFDIDKHHIKY VEHRAIQNEQHLFAQLDKISLSDGEGVMLRKVSSRYQAGRGSDLLKLKRY ADTEAQVVGYKPGTGRLLGMMGAMLVRLPDGTEFYIGSGFTDEVRRHPPK IGSTITFRYNGFTQTGKPRFARFLRERFKE >gid:499134 VP1484 hypothetical protein MVVETDGYLALIEHLSLNLDIFTTEIGDTGSESIEDVVTDMVASNIMAIF EQNPELHSSVRFKLLKEADAVVEDLGEVLAGVWSKKATNEQIAFLDEYIA LVKNLFDTAVATYD >gid:499137 VP1487 putative MutT/nudix family protein MQLLQRASLILVNHQQELLLIQRFQNDRHYWVFPGGSVEVGELLVEAAKR EALEETSLELNRVQKVFEIENQGRLETYFLSYVGNSKVKLGVGPEQTRQS DVNQYHLKWVRLDQLHTIPLYPEQAKVFCLDNEEWFYDR >gid:499201 VP1551 bacteriophage f237 ORF1 MSWCPSPTRPLNNVSTWGCLMTTATNILKSFDEQSVHIDYLCFTFAVKDL RHCHDAVRRLHKHEEYKGFAKSGLLQRHCRAPKFPAPPVFNPTVAQTSDE IDAYNKAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGFQFYTESMKLT SPDGEDFCGFVGIGGNNDTVHFQINGTGCKHVFARRPTWSLHDWLTNVLG VQTLARVDLAYDDYDGIFDCEYAYKAWRDDCFRTAERGRGPVLHEDMTIA SIGKDGKPIYTKEQYSIGSRTSRIYWRIYNKALEQKLANTGLVWYRSEVE LKKWNVDVLLNPAGAYAALNDFAASISTAKKFNTKPVPTKRAALDLLASA HWMRRQYGKILNSLIEFHEGDIETVVGSLVRDGTKFTFPDTYGKLVTHIL ET >gid:499291 VP1641 MutT/nudix family protein MFSTSSMTMAKSVSGASLNGIKGALCVVRADDKLVLVHEILTNKISLPGG TIIEGESPEIAAQRETWEETGLAVTVGNELGRTSTAILFDCVSDSEVIAF SMNNSLGGNELPSWFAPHYGVEVASAMLLNPSELTASQYRYPAQWPEVVN LFANTTNQPVSYVTQLIESAPTFRQVELSWVMELQGWIGELSDNSYKAAY DFASVVMELTTPTILLFLFPFVMMRFDSRFVYRLFFAITATSLMVLVAQQ GFSLPRPHVYVPMAELPNSYGFSFPSLPIAVWFCVLTFLFQRTHSFGFNS TTVLMAAITLIVMLCKFFLGSAFILDMLLGALLGILVAWHVLRLETNPEV NVDQLLSSKGVWFTLTAVTAVISVIWPLPVFGNWLAMLITASALVLTFKE SQVRLNSKQMIFVTLALILTQQVYLFAATSVSSSGFWSLVFMTFHYPILM LLFIFMARRLTHQNQYQEELKLSE >gid:499374 VP1724 putative DNA polymerase III, epsilon subunit MMWLEKSKASTPLLDTSQTPEWSVLFEQLAEQAQDQRLKRYYSTPMVNGD TPLKEVPFVSVDFETTGLNAEDDAILTIGLVPFTIDRVQCSGSAHWIVNP NRELNEESVVIHGITDSEVKNAPQLTQILGEILDALAGKVVLVHYKNIER QFFYNALLNTIGEGIQFPVVDTLDIEYALQRRECSGIWNKLKGKKPGSVR LGHARERYGLPAYQPHHALTDALATAELFQAQLQYHFNRDMPISAIWQ >gid:499437 VP1787 putative transposase MLEHLLCFNVVRMAKVFGVSRSGFYYWIKHRHKAIQREANRQELDIKVKE AFDSSKGRDGARRIQKELAENGNSHNVKTIAASMKRQDLTPKAARKFKCT TDSKHKMPVAPNLLAQDFNAAAPNQKWAGDITYVATSEGWLYLAVIIDLY SRQVVGWSMDTKMTATLVCDALSMALFRRGFPEQVIVHSDRGSQYCSKDY RDLMTAYNLKQSMSRKGNCWDNACVESFFHSMKVEAIQYEPIMTRDKTRQ AIFEYIEVDYNRARRHSALGYLSPVNFEQQNVA >gid:499438 VP1788 putative transposase MTSKKKRIIHSPEFKAEALKLADKVGVAAAARQLSLHESQLYGWRKAAKK DTSTSQREKDLAAEVAKLKRQLAEQTEELDIVKKAATYFAKNLK >gid:499446 VP1796 hypothetical protein MQIGIYMNLPKKELVVYNKARNFLLANTPDEVTDEILDSYLSLPEPSYKC LSINELYKRLLFSAQNANMKTGVIGGSIGGVEKLSSVLFDFDPEQTFLRY QGNAEKLLDEIVLNLKPKGKIRRTPRSLWPKYCETIISASEFLRQFSDSQ EFFEWAESFHRDKKSLAALPMLIDAEVQGVGFPLACDFLKELGFTNYGKP DVHIIEIFEASGLVAKGATNYQILKAISRIADSTGFSSYNVDKLFWLIGS GYFYNHPGIGNKGRVGKMKEAFITSLESENA >gid:499475 VP1825 putative CBS domain containing protein MQWLWHCVTHTLTRRYIFGGDMSLVEDFLSEFCEIEKYLRVLTNSDEHKS FSKMLQESKTKNRVVSRYIGELGTFASLRNLLSHERFSGAHVASPSEQVV ERIKELRAKIISQPRLLKLCSVELLTFDKSDTIQKVLLEMRKNDFSQVPI LSGGTLFGVLSSNTISRWLGSDAFEGLFCTSEATVEEVMAHQEFSDNYEI LPQDQTYGKAVAKFEKATSKGKALDAILITHSGKPEQELLGIVTMADMPK IMSELY >gid:499479 VP1829 RelB protein/Vco27A protein MDTRIQFRVDEETKRLAQQMAESQGRTLSDACRELTEQLAEQQRKSLSHD AWLTEQVNLAFEKFDSGKSVFVEHQTAKSQMEERKARIRNRGKQ >gid:499492 VP1842 RelB protein MFVSCPSQSLVLTFVHTPTKEYIMDTRIQFRVDEETKRLAQQMAESQGRT LSDACRELTEQLAEQQRKTLSHDAWLTEQVNLAFEKFDSGKSVFLEHQTA KSRMEERKARIRNRGKQ >gid:499515 VP1865 site-specific recombinase IntIA MKSQFLLSVKEHMLTRYYANKTIESYLFWIKRFIVFHQFAHPSKLSEDDV IRFLSHLAIDEKVAVKTQALALNAISFLYRDFFKTPLSLDMRFQKSLTEK KLPVVLTRDEVRRFVQHIDPRYKLHIQLLYGSGLRIMECLRLRIQDIDYD YGAVRVWQGKGGKNRTVTLAKELHEPLKSQMNFARNYYFKDRHVPGYAGV YISEGLRRKYPNAELDFNWHFLFPSNKLSVDKETGQLRRHHINESAIQRA VKRSALDANIEKTVTCHTLRHSFATHLLESGADIRTVQEQLGHTDVKTTQ IYTHVIERGAGGVLSPLSSL >gid:499528 VP1878 MutT/nudix family protein MVIDKTKLLQNFQFHLPTGYHKESLARLNFMKGKPLRDAAVLIGFVDRPE GLQVILTKRAEHLRHHPGQISFPGGKFEPEDIHLVNTALRETNEEVGIED KHIHVFGQLPKLPTISQFNVTPFLAFISPDYKTHIDPNEVESVFEVPANH ILNPNKLYSSKFELKRSSHRVFAIPYRQHFIWGMTAQIIESMQKHIISG >gid:499553 VP1903 putative DNA polymerase III, epsilon subunit MRFGMIKKLFQKPAIQWPTKFQQKLELVSDENLVAFYGSELPAPNTPISE VEFVALDFETTGLNPEKHDIITIGLVPFNLRRIFLRDARHWKVRPQKKLD EDSVIIHGITHSELIDAPDLSDILGELLPCLSGKIIVVHYRRIEREFLDQ ALKARIGEGIEFPVLDTLQIEENIQKRSAGGIWNRLKGKRPESLRLAQSR RRYGLPDYSPHHALTDAIAAAELLQAQMAHHYNDDQPISDFWL >gid:499582 VP1932 DNA gyrase, subunit A MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLF AMNVLGNDWNKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRY MLVDGQGNFGSIDGDSAAAMRYTEVRMAKIAHELLADLDKETVDYVPNYD GTEQIPAVLPTKIPNLLVNGASGIAVGMATNIPPHNLGEVIDGCLAYINN EEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKIYMRSKAEIET EKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALNNGQPQLFNLKDML KCFVDHRREVVTRRTIFELRKARERAHILEGLALALANIDEIIDLIRKAP TPAEAKAGLIARGWDLGNVAAMLERAGTDAARPEWLEPQYGIRDGQYFLT EQQAQAILDLRLHKLTGLEHEKILAEYKELLEEIAELMHILASTERLMEV IREELEAVRDGFADARRTEITAASHDIDMEELIAREDVVVTLSHEGYVKY QILSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILCFSTRGKTYR LKVYQLPLASRTARGKPIVNILPLEDGERITAILPVDEFSADKFIFMATG DGTVKKTSLDQFANVRSNGLIAVNLRDDDSLIGVDITTGSSDIMLFSKAG KVVRFSEDKVRAMGRTAAGVRGMKLADDDQVVSLIVPSNEGDILTVTQNG YGKRTELAEYPTKGRATQGVVSIKVSERNGPVVGAVQVEEGDEMMMITDA GTLVRTRVAEVSQVGRNTQGVTLIRTAEDESVVGLQRIDEVEEVELPEGE EAETTEANAEQQAPEAPAEDDAEEGKEE >gid:499598 VP1944 excinuclease ABC, subunit C MNPPFDSASFLKTVTHQPGVYRMYNADAVVIYVGKAKDLQKRLSSYFRKK VDSEKTRALVSNIAKIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDDK SYPYILISGHKHPRLSMHRGAKKRKGEYFGPYPDSGAVRETLHLLQKIFP VRQCEDTVYSNRTRPCLMYQIGRCAGPCVSSIISDEEYAELVGFVRLFLQ GKDQQVLKQLIEKMEVASQQLRFEDAAKFRDQIQAIRRVQEQQYVSEDSM DDMDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPQNTSQQEVFDSF LTQYYLSHNEARTIPSRIILNQELADDLEPIQKALSEVAGRKVHFHTSPT GARGRYLKLSNTNALTAITTKINHKMTINQRFKALRETLGMESIMRMECF DISHTMGESTIASCVVFNNEGPVKQEYRRYNITGITGGDDYAAMGQALER RYSKQLDVEKIPDIIFIDGGKGQLNRAHEIIAQYWGDWPKRPIMIGIAKG VTRKPGLETLITVDGEEFNLPSDAPALHLIQHIRDESHNHAIAGHRAKRG KTRRTSALEGIEGVGPKRRQALLKYMGGLQELKRASVEEIAKVPGISHSL AEIIFQALKQ >gid:499600 VP1946 DNA polymerase II MNIQQGFLLTRQARDIKGQTQIELWLATEAGPTQLLINGEKPVFFIAQEY IEQTQNLALSKSIQVEIRTLELKTFEHTPLAACYTKVTKEALVLQDLLSQ QDIVTYEGDIRLADRYLMERFIKGSVEFTGHQQSRNGFHRIQNAKCRSGD YEPKLHVVSLDLECSEKGILYSIGLDSPHDSRVIMIGEPEPAETNIQWVQ NEKALLEALIAWFKSFDPDVIVGWNVIDFDFRLLHKRAEWHNMKLMLGRA DQPSFFRSSSQSQQGFISIPGRVVLDGIDTLKTATYHFRSWSLESVSQEL LGEGKEIHNVHDRMDEINRMYRSDKPSLAKYNLQDCVLVNKIFEHTHLLA FAIERSRLTGVELDRVGGSVAAFTNLYLPQIHRAGYVAPNLHPENWIASP GGYVMDSIPNLYDSVLVLDFKSLYPSIIRSFLIDPMGLVEGLLLDIGKDD DQAVPGFRGGQFHRSKHFLPEMIEKLWAARDVAKKNNEKAFSQAIKIIMN SFYGVLGSSGCRFFDTRLASSITMRGHEIMKQTKVLIENKGYQVIYGDTD STFVSLNGSYSQAEADEVGNHLVEYINSWWQEHLRAEYNLTSMLEIEYET HYRKFLMPTIRGAETGSKKRYAGLIGEGEQERIVFKGLESARTDWTPLAQ KFQNTLYRMVFHGEDPSDYVREVVEKTNNGEFDDQLVYQKRLRRKLHEYQ KNIPPQVRAARLADDINAKLGRPLQYQNRGRIEYLITLNGPEPHEYRNSP IDYQHYIDKQLKPVADAILPFIGTDFETLSAPQMGLF >gid:499639 VP1985 hypothetical protein MVLQTLEQLKTGQLVGIKQLKLAEGLTEFPMEILELADSLEVLDLSGNAL SDLPQELEQLAKLKIIFASNNQFTHLPEVLGKLPNLEMVGFKTNKIKVVS EASLPSQLRWLILTDNEIETLPNSLGERPRLRKLALAGNRIKRLPRSMEN LVNLELIRLSANQLEHFPDVLMKLPKLAWFAFAGNPFCKHPSSLNSVPKV TTNSYSLNHVLGQGASGVISHANWIDAQYDFPSEVAVKVFKGEVTSDGYP HDELEACLQAGHHNNLVKSIAQVDDGKELALVMELIPNSYYNLGLPPTLE TCTRDTFPQGFTLTVEQVNSIVEQMVDVFNHLHDNKVCHGDLYAHNTLVN EQGEMIFGDFGAASIYGYLSGEQQAAIRAIESRALKYFIEDVFSVCEESE SASQEFERLVGLVA >gid:499683 VP2029 integration host factor, beta subunit MTKSELIERLCAEQTHLSAKEVEDAVKDILEHMASTLESGDRIEIRGFGS FSLHYREPRVGRNPKTGDKVELEGKYVPHFKPGKELRERVNLG >gid:499688 VP2034 hypothetical protein MQDIIQHLKSQHLVWQANLTKADDHQFLSSSGFAELDELLGGGFPSHGVV EMESVGSIGELRLLAPYLKASLSRGVTAFIQPPALMNSLFLHNIGLDINQ VWIVSPTHHRDALWAAEQCLKSGVCANVLLWQDELEIHQVKRLQVASEQG ACPLFMLKPSMANRLSLPVSLSLKLQGHEQGVNVEVLKRKGGWNKGSINI DFQHDYPQLVMPVMTHIPSTVVNFPLANQG >gid:499689 VP2035 hypothetical protein MVLWIYLHFPHLQLDALFGNNQEHPVVIVESQRCRIIQYNETAEQQGIRP NMGLGSAASLCHDLQVHPYHPQTEWNKLQEVAQWMYLVTSDVVLMPNQGI LLRATPMLNLYEGLQNYWNKIRTHLDELKLSFQFGCGFSPFSAKLMALSG ANVLSEDKAFIQKALFSLPLTLTDLSPSNVEKLQRVGTTTLQGLLELPLQ DIARRFDIDLVNYVGRLTGQFKHPVDFYHPTESFQVYLELLFEIENVQWI EKPLAKLLRQLETFLKLRDKVAFELRLTLHQRDKHEQHLQLTSAQGDYLC HRWQQLASLSLESLTLNGAVVGLTLKVVRQGEPLSAARDLFSGPKGQMNA LELLSLLQAKLGKSAVLKPDIACDPRPEKASQYRLADEPDVPTHSIPDLL RPAMQLPAPIALQEQVSLVHGPERIVSGWWDGDEIMRDYYIAHTKQGRWL WVFRDQHKHWFLHGYFC >gid:499690 VP2036 putative DNA polymerase III alpha chain MSYAELFCQSNFSFLTGASHAEELVLQAAFYRYHAIAITDECSVAGVVKA HATIEQHKLDIKQIVGSMFWLNEECQIVLLCPCRKAYAEMCRIITNARRR SEKGSYQLSEWDLMSIRHCLVLWLPTHQASDHYWGRWLNQHHNNRLWVAI QRHLGGDDDAYTNHCEKLAHELQQPITACGGVLMHTAERLPLQHILTAIK HGCSVDQLGFERLSNAERALRPLNKLVRIYKPEWLEESKYIADLCEFKLS DLKYEYPTELIPNGYTPNSYLRMLVEQGKERRFPEGVPEDINQTIENELR LIEDLKYHYYFLTIHDIVMFAKQQGILYQGRGSAANSVVCYCLEITAVDP RQISVLFERFISKERKEPPDIDVDFEHERREEVIQYIYKKYGRERAALAA TVISYRFKSAVREVGKALGIEETQLDFFIKNVNRRDRSQGWQAQIIELGL QPESLKGQQFIQLVNEIIGFPRHLSQHVGGFVISSGPLYELVPVENAAME DRTIIQWDKDDLESLELLKVDVLALGMLNAIRKCFQLIEKHHQRSLSIAE ITRRQDDPHVYRMLQKADTVGVFQIESRAQMSMLPRLKPACYYDLVIQIA IVRPGPIQGDMVHPFLKRRNGEEPVSYPSEAVKSVLERTMGVPIFQEQVI KLAMVAAGFSGGEADQLRRAMASWKKNGDLAKFKPKLLNGMQERGYDLAF AERIFEQICGFGEYGFPESHSASFAVLAYCSAWLKYYYPAEFYTALLNSQ PMGFYSPSQLVQDARRHGVEVLPICVNHSYYQHHLIQRPNGRLGVQLGFR LVKGFNEEGATRLVERRPKTGYHSIQEVKQILRSRRDIELLASANAFQIL SGNRYNARWAAMDSLSDLPLFHHIEEPSVGYQVQPSEYESLIEDYASTGL SLNRHPITLLEEAGILPRFTRMKQLVDKEHKSLVTVAGVVTGRQSPGTAA GVTFFTLEDDTGNINVVVWSATARAQKQAYLTSKILMVKGILEREGEVIH VIAGKLIDCTHYLSNLQSKSRDFH >gid:499701 VP2047 putative deoxyribonuclease MFVDSHCHLDKLNYDNLHINIEDVINKAKQANVKELLSVGVTLDSFPNML EMIEPYENVYASCGVHPLDVESAFSMETLRRHASHERVVAIGETGLDYHY KPETAALQKERFEQQVELAVELNKPLIIHTRNAREDTLDILRNGGAEKCG GVIHCFTEDLPFAEAAMDLGFYISISGIVTFRQATELKEVVKALPLERLL IETDSPYLAPIPHRGKENQPAYVVEVAAYIAQLKSCALSEVAHKTTENFR NLFLR >gid:499702 VP2048 DNA polymerase III, delta prime subunit MFNDFPWLKPAWENLKSGLDSDRIPGALLLQSDKGLAVEMLVEFFSHALL CQNYSSEACGFCHSCQLTKSQSHPDLHWIRPEKEGKAITVDQIRACNRLA HESSQLNGYRLFVIEPADAMNESASNALLKTLEEPGEKCLFLLVTHNQER LLPTIRSRCQHWVVTPPSTDQAMQWIGEQGLSQVPAFALKLNMGSPLKTL ESLKNGELEEYSAFERCLVETLLSPTSDVSKCASLMAKNPDQALDWAWLL LTDAQKAQFGVVDEGILPGAAKFQPHHYDGLYASTKKLMELKAQMQTFPG LNLELLSMNWLIESREALCS >gid:499754 VP2100 excinuclease ABC, subunit B MSKVYELVSEYQPSGDQPTAIKQLLEGLDAGLAHQTLLGVTGSGKTFTLA NVIAQAQRPAILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEA YVPTTDTFIEKDASVNAHIEQMRLSATKALLERKDAIIVASVSAIYGLGD PESYLQMMLHLRRGDVIDQRDMLRRLAELQYSRNDVAFERGQFRVRGEVI DIFPAESDQDAVRVEMFDDEVDCISVFDPLTGVVKQRDLPRYTIYPKTHY VTPRDRILEAIESIKVELEVRKKQLLENNKLIEEQRISQRTQFDIEMMNE LGFCSGIENYSRYLSGRSEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGA MYKGDRSRKETLVEFGFRLPSALDNRPLKFEEFESLAPQTIFVSATPGNY ELEKSAGEIADQVVRPTGLLDPILEVRPVATQVDDLLSEIRIRAAKEERV LVTTLTKRMAEDLTEYLHEHDVRVRYLHSDIDTVERVEIIRDLRLGEFDV LVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNIEGK AILYADNITKSMKKAMDETNRRREKQQAYNEKMGITPQALKRNIKDIMEL GDITKSKRQRNTKQVPLSKVAEPSQTYEVMSPQQLEKEISRLEAAMYQHA QDLEFELAAEKRDEIEKLRAQFIANS >gid:499763 VP2108 endonuclease III MNKEKRIEILERLRENNPNPETELNWSSPFELLIAVLLSAQATDVSVNKA TDKLFPVANTPQSILDLGVDGLKEYIKTIGLFNSKAENTIKTCKILLEKH NGEVPEDRDALEALPGVGRKTANVVLNTAFGWPTIAVDTHIYRVSNRTKF AMGKTVDDVEQKLLKVVPKEFKLDVHHWLILHGRYTCLARKPRCGSCIIE DLCEYKEKVYPDS >gid:499769 VP2114 ribonuclease T MTIENEALTLKKRFRGYFPVVVDVETAGFNAQTDALLEICAVTLRMDEEG VLHPASTIHFHIEPFEGANLEKEALEFNGIRDPFSPLRGAVSEQEALKEI YKLIRKEQKASDCSRAIMVAHNAAFDLSFVNAANERCKLKRVPFHPFATF DTATLSGLAYGQTVLAKACKTAGMEFDNREAHSALYDTQKTAELFCGIVN KWKALGGWPLVNEE >gid:499787 VP2131 hypothetical protein MYLIKLSNNVFYTRISTPAILQTSLGYPREIRLSLFTKYRRLATKRNAQL ASAIHTLHEQALAENIPYTDFKISLSTKVAEIRQQFCSNLPHVDNPQSKC TSMSIKTRAMPAPAPAPAPAPAPEESVNSLLIGAQELTTELNNFIRSKRL EQVTPLTLTQLNQRCTNFLSYLAKQENCLSAKAANTYRDHLIEKGLSAKT VKEYIAANKQFFDYCERIELIEKNVFKAIKAPKSRVAKASQQRDRWQLKE LKKLFSSSEYRKKDVQFNWTTKIQLYHGCRPSEVCQLTTSDIQIIEGVPC ITISDSEAEQRLKTSNALRIVPLHNQLINEGFLEYVQGRREQKQKQLFDY KPHGDNKDWSFRYRTNLGKLQTAIGMKPNARPTAYSFRHTFIDELKIANT PEHIVAEIVGHAHPNITFGRYGKQANIQQLNEAVNKFPSVEVKYA >gid:499792 VP2136 putative pore-forming cytotoxin integrase MKTITTTKSPTVKDYIDAYLIERKYCAAPSTLASDLSRAKNINEALGEFP INAVSHTQINMLLVSWHERFRNKTINEHLTILRRISLKAVRDGVIARNPM TGVQNFKTVDPEPNPFTKKELARMHECKNVCTQGQNAVMLNLLTGLRISE LIALSWQDINWEREVLYVRRACVLNIYKCPKTKGSVREVDLNPLALKLLK EQLKLTGKRRPQTINILECDNKTFTKDSVSFIFLNTKTNQPFTDAKEFTE RFFIKFLEQAGVAHRGVGQLRHTFASQCLTTGISKDWLAVQMGHKSTTMI DKHYGRWIREDSPNYAREAAQHLQDIFGLPQIKPTVTLPAVPHSSLVLLK KLQSKPQLIQLLEGMLESDR >gid:499805 VP2149 DNA topoisomerase III MSRLFIAEKPSLGRAIAAALPNPQKKDQGFIRCGNGDVVTWCIGHLLEQV EPDAYDERYKKWNMADLPIVPQQWQLRPRKSASKQLTVIRKLLKEATEVI HAGDPDREGQLLVDEVLDYCKLSKTKKEATQRLLISDLNLPAVKRALSSM RSNRDFIPLSVSALARSRADWLYGMNMSRAYTLLGQKAGYQGVLSVGRVQ TPVLGLVVRRDEEIENFVPKDYFTLHALIPYQDQNGAFDIRARWKPSEAC KPWQDEEGRVLNRKLVENVANRIANQPAIVKESEQKQTKQSAPLPYSLSA LQIDAAKRYGMSAQQVLDTCQALYEKHKLITYPRSDCRYLPLEHYSQAGT VTSAIANNAKELQSAVNGADLSIKSKAWNDKKVDAHHAIIPTPKQANVNA LSGNEMKVYQLIARQYLMQFYPAAVYAEAKLVFDIAGGIFIAKGRQLVSP GWKALMGKTDKEDEGIDTVPPLSEGTVLTCREGEIKDRKTEPPKHFTEAT LLQAMTGIARYVADKELKKILRDTDGLGTEATRAGILDTLFKRQLLTRQG KSILSSQAGRGLINALPQDATYPDMTAHWEHQLQGMAERNQAYQPFMQAL EQRIDGLMSQVKSGPIPDSLRHLPKVERPAFKRKKRSYPNSGASKAGASK RKSS >gid:499833 VP2177 recombination protein RecR MRTSHMLEQLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLADALSQS MTEIGHCAECRTFTEEEVCHICTNPKRQENGQICVVESPADIAAVEATGQ YSGRYFVLMGHLSPLDGIGPSDIGLDVLDYRLRRGDISEVILATNPTVEG EATAHYIAELCREHQVEASRIAHGVPVGGELELVDGTTLSHSLLGRHKI >gid:499835 VP2179 DNA polymerase III, subunits gamma and tau MSYLALARKWRPNKFDQVVGQKHVLTALENALAQNRLHHAYLFSGTRGVG KTSIGRLFAKGLNCETGITATPCGECATCREIDEGRFVDLLEIDAASRTK VEDTRELLDNVQYKPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYV KFLLATTDPQKLPVTILSRCLQFHLKPISVDDIHQQLDYILGQEQVSAES KALGMISHAADGSMRDALSLTDQAIALGNGAVQTDIVSHMLGTIDTDQAI HLLESISSKQPQQAMDKIHQLAANGVEWDGLLQQIATQLHRIAMYQALPA SLDRAQPDAEKIELLSKALSPQDVQLYYQIALKGREDLTLSPNGRVGMEM IVLRMLAFRPSANNGANIVTAGSQPQLSQMPNASLTNSAPAQQAPVAQQQ SRPNPVQAQQSVSQPVRPSVNQPASMNEEPQYQPDYQTGGYDMSPPQYDM APPMSENPAPEAQPQQESAPAPSRMGAAGLRHQLRSQRKQGLQQNTTQNG GTKKPKAASAKPESVIDRVAQLHGNSAQVSPNSTPKPTEPEVEEAYRWRP SKPVETKVNTKLTPTQLKQALEHEKTPEMAQKLIDESLEQNEWAKMISLM NLPKLVEQLALNSHYSKEGSTVSLQLRSSQAHLNTDRAQSELLNALNTVL GEECHLSIEVGESGETPLELRDRLYQEKLQQALNSLENDPNVDFIERRFA AELDKDSVRPI >gid:499948 VP2292 DNA polymerase III, epsilon subunit MNTSSNSEHNRIVVLDTETTGMNQEGGPHYLGHRIIEIGAVEIINRKLTG RHFHVYIKPDREIQPEAIQVHGITDEFLVDKPEYASIHQEFLDFIKGAEL VAHNAPFDTGFMDYEFEKLDPTIGKTDDYCKVTDTLAMAKKIFPGKRNNL DVLCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTSLEFNANKQEGG VETIRRIEGRKALKVLRATADELEAHQKRLELVNDCIWHQ >gid:499949 VP2293 ribonuclease HI MTKHVEIFTDGSCLGNPGPGGYGIVLRYKDVEKTLSKGYTLTTNNRMEML AAVVALQTLKEPCRVTLTTDSQYVRQGITQWIHNWKKRGWKTADKKPVKN ADLWQALDKETARHQVDWHWVKGHAGHRENEICDELARTAAENPTEEDTG YQPS >gid:499959 VP2303 DNA polymerase III, alpha subunit MSDPKFVHLRIHSDFSMVDGINKVPPIVKKVAELGMPAMALTDFTNLCGL VKFYGTAHGSGVKPIIGADFKMQSDEFGEELTQLTVLAADNAGYKNLTLL ISKAYLRGHVQHQPVIDRAWLAEMSEGLIVLSGAKNGDIGKALLKGNRKL VESCVEFYKQHFQDRFYLELIRTGRPDEETYLHFAIDLAEQHDLPVVATN EVVFLSADLFDAHEIRVAIHDGYTLEDPRRPKNYSPQQYLRTEEEMCELF ADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMEETEFLVMKSREGL EERLEFLFPNEEERKKRRPEYDERLQIELDVINQMGFPGYFLIVMEFIQW SKDNAIPVGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMP DFDVDFCMDKRDQVIDHVAEMYGRDAVSQIITFGTMAAKAVIRDVGRVLG HPFGFVDRISKLVPPDPGMTLEKAFKAEPALPELYEADEEVKELIDMCRL LEGCTRNAGKHAGGVVISPTTITDFAPIYADAEGHFPVTQFDKNDVETAG LVKFDFLGLRTLTIIDWALGLINPRLEKEGKPPVRIESIPLEDPASFRLL QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDN FIDRKHGREAISYPDEKWQHESLKEILDPTYGIILYQEQVMQIAQVLSGY TLGGADMLRRAMGKKKPEEMAKQRATFEEGAVKNGVDGELAMKIFDLVEK FAGYGFNKSHSAAYALVSYQTLWLKTHYPAEFMAAVMTADMDNTEKVVGL VDECFRMKLTVLPPDINSGLYRFNVDENGAIVYGIGAIKGVGEGPIDAIL EARNKGGHFKDLFDFCARIDLKRVNKRVIEKLIYAGALDRLGPHRAAMMA SLNDAVKAASQHHQAEAFGQGDMFGVLTDAPEEVENKYTQVPPWPEKVWL EGERETLGLYLTGHPINAYLKELNKYTSCRLKDATPTRRDQSVTVAGLVI AARVMTTKRGTRIGIMTLDDRSGRMEVMLFSDALDRYAELLEKDRILVVS GQVSFDDFNGGLKMSAREVMDLGSAREKYARGLSVSIDANQINDQFFEQF SRILEPHKAGTVPVNVYYQRADARARLTLGTEWRVTPSDTLIDDLKQLLG KSQVELEFN >gid:499960 VP2304 ribonuclease HII MVAKAKTTKAKVELPPFEYPQGYQLIAGVDEVGRGPLVGDVVTAAVILDP NNPIEGLNDSKKLSEKKRLALLPEIKEKALAWAVGRCSPEEIDELNILQA TMVAMQRAITGLKVQPDLALIDGNRCPELPMDSQAVVKGDLRVAEISAAS IIAKVVRDQEMEELDKQYPQFGFAKHKGYPTKAHFEAIEQHGVISEHRKS FKPVKKALGLD >gid:499995 VP2339 conserved hypothetical protein MKKLLTLSLLMVSATGYAAQCRVDIHNEVRMDGQSLEIRQTSGDKAVVDE DNNLFIKGELIELDAEQKAAIEAYREKMNAYIPQAKQLASDGLELANDII DDVAASLDAPGAFDNVKVAVKDFFADVQSRYYKDGDFILPADSFESMTQG WTKDFEKAQEIFNKEFLASAFDALSKKMKEEGGLNLTALSESMAELSAKV EQRLAEHSKEVEQQAEDLCDSLDNMAGQEDDLLKKIPELKDYRVFTI >gid:499997 VP2340 putative ATP-dependent DNA helicase RecQ MYSSLSPKKGFPNMQSTQLLQTLQSVFGFDSLRQGQQPVIESVMNGYSAA AIFPTGSGKSLCYQLPATMLPNLTLVISPLLALMKDQLSFLQSKGIAAAS IDSSQSREEAQRVMVGVKNGEIKILMISVERLKNERFREFIRQVPISLMV VDEAHCISEWGHNFRPDYLKLPQYQRELNIPQTLLLTATATPAVIEDMKN KFDIASDHITVTGFYRSNLDISVIPCEESEKQTQLNTIVAAAPKLPTIVY VTQQQTAEQVAKSLIHIGVNAHAYHAGMKSEVREQIQQQFMAGQIDCIVA TIAFGMGVDKSDIRRVIHFDLPKSIENYAQEIGRAGRDGQRSECILLGNT SGLTVLENFVFGDTPERSSISYVLGQIKEHQPQWEVVPLRLSRESNIRQL PLKTLLVYLELAKVIEAKFSYFAEYRFKFLQNQQFIVNQFQGERREFVEA IFTCSTKAKVWCQVDLDALWMHYHSERSRVVAALDYFHQNGWVELESKQL TDVYSVLPDTQNIEDITQHLYELFQSKERKDIDRIHAMLGLFQSSDCLSH QLASYFADHNAPAHCGHCSVCRGQRSVFPPRIYDQPEPAVASAWIAEFVQ LSPSAISNEAIARFLCGISTPLISQLKALKLSGYGALANVSFEQVLQLVE SVRE >gid:499998 VP2342 DNA-damage-inducible protein P MSERIRKIIHVDMDCFYAAVEMRDNPNYRDIALAVGGHEKQRGVISTCNY EARKFGVRSAMPTARALQLCPHLLVVPGRMHIYKQVSLQIRAIFERYTSL IEPLSLDEAYLDVTDATACRGSATLIAESIRNDIRNELGLTASAGIAPIK FLAKVASDMNKPNGQFVIPPEKVQEVVDKLPLEKIPGVGKVSLEKLHQAG FYLCEDIKNSDYRELLRQFGRQGASLWKRSHGIDDREVVVERERKSVGVE RTFSQNISTYDECWQVIEEKLYPELEKRLERASPDKSIIKQGIKVKFADF QLTTIEHIHPQLELEDFKLLLKDILKRQNGREIRLLGLSVMLKPEEQARQ LSFF >gid:500029 VP2373 exodeoxyribonuclease V, 67 kDa subunit MTTNHNLHSGQDSLLVVLERLAHKGAIRQLDYQFACFIDSQTHDEQSDSQ ALAFIAGVVSSELGKGHICLSLFDAQGQSTDLASKLGLFGESALALNTQL QGIDWIQVLKNSTVVGAQGEALPLMFDGERLYLHRYWHYEVTLAEKLNQL GAAVNLQAQEFSRLSELLNHLFARQYHFLFNALGKAVEAGSSNQVLRQQL VCDHLDVVASESLDWLAIDSVLSNARKVQDLQTLNELVPLSACVNWQKVA AAVALTRRFAVISGGPGTGKTTTVTKLLAALIEQATHEKNLTIKLVAPTG KAAARLTESIGKAVQELPVSPELKVKIPTESSTLHRLLGAIPNSAEFRHN KQNPLHLDILVIDEASMVDLPMMYKVVDALPKHARLILLGDKDQLASVEA GAVLGDICSFHALGYGKEQASAIAKLTGFDTLAHTGNSASSIADSLCMLQ KSYRFDARSGIGQLAKAVNSGSAASVDNVWARDFSDIEHFALSSQHYNQM MQTLVQEYGRYLKRIEQQETDPKTGEPESLTHKAKAVLDTFNQCRLLCAI REGDFGVAGLNQRIEKALAARKFIQVQDEIWYHGRPVMVTRNDHGLGLYN GDIGICMRDDSEEEPRLKVFFELPDGSVKSVLPSRVPEHETAYAMTIHKS QGSEFDYTLMILPPDFSPILTRELIYTGITRAKKRLALYAELNVLKRGIK VKTTRASGLVQRLTN >gid:500030 VP2374 exodeoxyribonuclease V, 135 kDa subunit MDQMSGAECPLHTLDRTEQPQPTPLEPMTFPLHGARLIEASAGTGKTFTI AGLYLRLLLGHGSAETRHRVPLTVDQILVVTFTEAATAELRDRIRARIHD ARIAFARGQSSDPVIQPLLNEFDDHKQAAEILLQAERQMDEAAVYTIHGF CQRMLTQNAFESGSRFNNEFVTDESHLKAQVVADYWRRNFYPLPFTLAGE IRQLWSSPSALLSDISNYLTGAPLSLSVPAMKGSLADLHTENLKKIDELK AQWRESQDDFFTLISDSDINKRSYTKKSLPTWLEAVNAWAATETTGYDYP DKLEKFAQNVLLEKTPKGSAPQHAVFEAIETFLANPISLKAPLLAHAIEH CRVMLANAKNQKQWLSFDDLLTQLSASIDTDESELLAARIRTLYPVAMID EFQDTDPLQYSIFSRIYLNDPECGLFMIGDPKQAIYGFRGADIFTYIKAR NQVSAHYTLGTNWRSSADMVQAVNQVFALPDSPFIYDSDIPFLPVKYSPN AEKRIWTMGGQKQPALTYWLQEADDKPLPKGEYLTRMAEATASQIQTILT QAQQGQACLVNGEKQKAVQAGDIAVLVRTGSEGRMVKQALADQGIASVYL SNRDSVFTSSVAQDLQRLLQAVLTPENDRALRASLASELFALDAASLDAL NNDEVVWENAVNEFKEYRKLWVQRGVLPMLRAVISKRHIAERLLEEGASS QGENGERVLTDLMHIGELLQQASNELDSDHGLLRWLAQSISDAENGLGGS DDQIQRLESERNLVQIVTIHKSKGLEYDLVFLPFVFSYREASEAKYYDAA NDRTVLDITGNDASMKQADKERLAEDLRLIYVALTRAVYACFIGASPLRN GRSTKEPTGVHRSAIGYLIQNGQEGGINDLHQGLTKQQDELDCVVVADPP QQLEDKYVAPQEEIHDLSAKELQNPIDRNWRITSYSGLVKQGSHHAEHDA TIEITGFDIDSSEEQDEADLVEPERSIFTFPRGARPGTFLHSLFEEIEFT QPATTEENTQIILGLMESEQLDEEWLPILQQLIDTVLVTPLDGKSLLLNQ KAPSQRLVEMEFLLPIEVLSAPALNRVIQRHDPLSAKAGDLGFQTVQGML KGFIDLVFEHQGKYYVLDWKSNHLGDDVTHYHGEALKSAMADHRYDLQYQ IYALALHRFLRSRLANYQYEQHFGGVYYLFLRGMDGQSDHGIFAAKPTLD FLREMDRLIDGQVLETRSTQAGQMELL >gid:500031 VP2375 exodeoxyribonuclease V, 125 kDa subunit MFTVYHSNQVDVLKSLLVELIRISPLENPFEKEQILVQSPGMSQWLKMEL AKEFGVAANIDFPLPATFIWEMFTQVLPDVPKRSAFNKEAMTWKLMHLLP GLLNQEVFSPLAQYLKDDSDHSKLYQLAEKIADIFDGYLVYRPEWIASWE AGQSVPELEDEHPWQPILWQALYDHTVSLGQSPCHRANLYEHFIDTLASF NGNFDHLPKRLFVFGISSLPPRYMDALKAIGEHIDVHLMFTNPCRYYWGE VRDRKYLARLAAKHRQHVVWQDDHSEVQGETEQLKGSLEDNVIDELHTDV VGNSLLASMGKLGRDNMYLLSQLESHEIEAFVDVERDSLLHQLQADILNL EEHQDDQQIENSHHKQVVSLGDKSLSLHACHSPMREVEVLHDQLLAMFDA DPTLKPRDIIVMVADINAYSPAIQAVFGNAPGERFIPYSISDRTADQESP ILAAFMQLVNLPNTRCLASELLELLETPAILKRFELSEDDFLQAKQWVEE SGIRWGLDANTGREFELPETRQNTWQFGIQRMLLGYAMPESAGLFETEQG SLSPYNEVQGMGAELAGKLAHFIQQISTYRSKLSHVQTIDGWRETLVSLL DDFFSVELEGEMALKSIRDTLSQLKEQLADAAFDDALSPSIISQYLQNKL SGTRVSQRFLAGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSMPPEGFD LMTGRTKPGDRSRRDDDRYLFLEAMLSAQQTLYISYVGRSIQDNTERVPS VLVSELMEYCHQNYCLSGDEALPVDESGDNLLNALVNTHAMVPFSPSAFQ GTHASYAKEWIPAALTQSSQSQGYVRRDFNRALDDYLFGATFPLELDLVE LQRFWRLPVQYFFNRRLKVIFEPPLPVMEDDEPFVLGGLESYQMRDELLE TLLETTLMQPEKKTEVLKHFMSQQRAQGKLPVGAFGDIEFETNRVQAEEL VDKLAFLSGAPQDDLEIDLTFDSLFERNEGEEKNVRLTGWLTQCYQSGLI RYRSGKIRSQDYLAAWIDHLAMSASGYAKKTHLIGYDRKEGALHLIYPEI ADAQYAKQLLTELVRLFFEGMTKPLPYFPKTALACVEAGFSRGQWVDDEE KSLKKMADAFNDGFMSPGEGNNAYISRIWPAWNDELASEVRLLTALVLQG ARLAVQDADDVKA >gid:500095 VP2439 putative hydrolase MKFFDTHCHFDFEVFQDDFAHQLELAQTQGVARILIPSVGPQNWARIQML AEQHANLYYALGFHPYFLEDNVEQHLSELERYLNQKSPQCVAIGECGLDF AVNVDPELQERALEIQFELARRFNLPVILHSRKAHNRLIQMVKAAKLPRG GVLHAFAGSYQQGMEWVRLGFFIGVGGTITYPRAHKTRDAIQRLPLENLV IETDAPDMPILGYQGELNHPAKLIHVFNELAELHSVRKQSIATQLWENSN FAFSICE >gid:500099 VP2442 DNA polymerase III, psi subunit MSINEKQYLHEMGITSWELIHPERLAGYQPPTIDLPSSCKLLLVSPICPT NETAILFEKILKSMKLTLEQAMHIEPERLAMLGEHQLEWVWFAGCESNSM ENAKQLTSPLLQDIDGNNEQKRALWQQICSYS >gid:500157 VP2498 ATP-dependent helicase HrpB MSQLPIEAVMPQLLTAVKHQHQVILKAAPGAGKSTYFPLQLIQNQVVIGK VIMLEPRRLAARNIARYLAEQLGEQVGQRVGYRVRGETKVSASTQLEIVT EGVMTRMIQNDPELDGVDLLIFDEFHERSIHADTALALSLEVQEALRDDL KLVVMSATLDQEALQSLLPEACYIESEGRSFAVETRYAPLTANDHLSTVM AKNIESLMNKESGSLLAFLPGVAAIKQVQERLSHLPDDVEVCPLYGQLSF TEQQKAISPAEKGKRKVVLATNIAETSLTIEGIRLVVDSGLERVARFDLK NGLTRLEQTRIAQSSAIQRAGRAGRIEEGICVRLYSESQLKQQPQVPQPE ILHSDLASLVMELAFWGTTDIHELKWLDIPSAAALRQAKQLLFSLGLITE QGQLTAEGKQAHDLGVEPRAAAMLIKSQSHSDKMVNVALAAVALIEEPER NVTNIAHSLHRWLSGSHPKKTLLLKRAQSLAHKLDTTFSLREVDEDALPL VLSLAFPDRIAQQRANQFGRFALANGHGAECRPDDMLGGCEYLVAIDLMR SHSNSSQIHLACELDVNILQTTFDSLFSTEEVVDWDEKKGRLVAEKQRKL GQLVIERVSLPNPGKEKMTQALLTYVRRQGLSSLNWTPAAESLLERIRCA VDWLPEQAWPMFDEASLLDSLDEWLEPYMTSVASVKDLSKINLVEALNAR LGWPLNQHLDEWLPEHYQLPTGTKKRIRYQHGHEPVLSVRMQEVFGESTS PTVALGRKRLVLELLSPAQRPLQVTSDLAAFWNGSYKDVQKEMKGRYPKH VWPDDPANHVATTKTKRQLNND >gid:500218 VP2550 RecA protein MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIAL GAGGLPMGRIVEIYGPESSGKTTLTLELIAAAQREGKTCAFIDAEHALDP VYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTP KAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGV MFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNETRIKVVKNKI AAPFKEANTQIMYGQGFNREGELIDLGVKHKLVEKAGAWYSYNGDKIGQG KANACNYLREHPEIAKTIDTKLREMLLSPAQPEAPAAGEKPEQEEEF >gid:500220 VP2552 DNA mismatch repair protein MutS MKAEQKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDI SLTKRGSSAGEPIPMAGVPFHAVEGYLAKLVQLGESVAICEQIGDPATSK GPVERKVVRIVTPGTVTDEALLSERLDNLIAAIYHHNGKFGYATLDVTSG RFQLTEPETEEAMMAELQRTAPRELLFPEDFEPVHLMSNRNGNRRRPVWE FELDTAKQQLNQQFGTRDLVGFGVEHASLGLCAAGCLIQYVKDTQRTALP HIRSLTFDRQDHSVILDAATRRNLEITQNLAGGTDNTLAAVLDHCSTPMG SRMLKRWLHQPMRCIDTLNNRLDAIGEIKDQGLFTDLQPTLKQIGDIERI LARLALRSARPRDMARLRHAMQQLPELESLTASLTHPYLVKLAQYAAPID EVCELLERAIKENPPVVIRDGGVIAEGYNEELDEWRKLADGATEYLEKLE ADERERHGIDTLKVGYNAVHGFFIQVSRGQSHLVPPHYVRRQTLKNAERY IIPELKEHEDKVLNSKSKALALEKKLWEELFDLLMPHLEQMQNLASAVSQ MDVLQNLAERADSLDYCRPTLVKDAGIHIQAGRHPVVEQVTSDPFIANPI ELSPSRKMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESAQIGSLD RIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEIGRGTST YDGLSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANVHLDAVE HGDSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNARTKLSQLEQLGQ ASDSPRPSTVDVANQLSLIPEPSEIEQALSNIDPDDLTPRQALEELYRLK KML >gid:500238 VP2570 DNA repair protein RecO MSNLSAEGFQRCFVLHRRPYSESSLILDVFSEEYGRITLMAKGARSKRSN LKGALQPFTPLLLKWSGKGSMKTLRQAEPISLGLPLFGINLYSAMYVNEL VGRVLMAEVPMPALFHDYLHALTELAQCENPEPALRRFELALLSSMGYGV DFLHCAGTGEPVDPEMTYRYREQKGFIASVRRDNLTFLGNELIAISERRF VTKEQLKAAKRFTRIALKPYLGGKPLKSRELFIQTPRARSNGK >gid:500277 VP2609 extracellular deoxyribonuclease precursor MKYLFTLFLFVLSTSAFSAPPSSFSAAKREAVKIYQDHPSSFYCGCDIQW QGKKGVPDLASCGYQVRKQEKRAARIEWEHVVPAWQFGHQLQCWQSGGRK NCSRNDTAFKLMEADLHNLTPAVGEVNGDRSNFNFSQWNGMDGVSYGRCD MQVNFKQRKVMPPDRARGSIARTYLYMSKEYGFKLSKQQTQLMSAWNKTY PVDKWECERDKRIAKVQGNHNPFVQEACRAL >gid:500281 VP2613 conserved hypothetical protein MSRTIMAFDFGTKSIGSAIGQEITGTASPLKAFKANDGIPNWDDIEKQIK EWQPDLLVVGLPTDLHGKDLETITPRAKKFAKRLQGRYGLPVELHDERLS TSEARAELFSMGGYKALSKGNIDCQSAVVILESWFEALWGE >gid:500292 VP2624 hypothetical protein MYHYAILANPGHNRIYFDSAMTIACSELKAILASEGVEVTEIGSKDVGLP AALVFSCEQALSEAQSRKIAASSIYYALFEVREDGLLRPIQAPAFNTFPE SMSQILRYTGKTNEQFTRLMVNLGVSAANTDSTQLTLMDPMCGKGTTLFE GLIHGLNVVGVEINQKWVQEIQTFIVKFMKNGRFKHKVSKEKRTSGGKKV ADGFVVEAAASKEDYLQGNLQTMKLYSADTRIADQVVKKNSVDVMVSDLP YGVQHGSKNAKDSKLNRSPLELLKEALPAWKVVLKKQGSVVLSFNEFTLK WKDVAALFEEQGWKVLSEEPYIGYLHRVDQSINRNIIVAVKP >gid:500294 VP2626 A/G-specific adenine glycosylase MTPFASAILEWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYY QRFLERFPTVVDLANAEQDEVLHLWTGLGYYARARNLHKAAKEVAHKYSG EFPLNLEQMNALPGIGRSTAAAVLSSVHKQPHAILDGNVKRTLSRCFAVE GWPGQKKVENQLWEIAEAHTPQTDVDKYNQAMMDMGAMVCTRSKPKCTLC PVADLCVAKKQGNVLDYPGKKPKKEKPVKQTRFVMLHHHNENGHEVWLEQ RPQTGIWGGLFCFPQTEHVDVESDIDLLLEQRGIKASDINKQETLITFRH TFSHYHLDITPILIDLSKQPDVVMEGSKGLWYNLSQPEEVGLAAPVKLLL EALPHELR >gid:500334 VP2645 DNA polymerase III, chi subunit MQTATFYIINEESPQATTAGFEEYIVFLVQHFARQGAKVYLNCQDKPHAE QLAEAFWQIDADQFMAHNLVGEGPKYATNIEIGHDGVKPSWNRQLVINLA ENETTFANKFAQVVDFVPCEEKAKQLARERYKIYRQAGYQLQTIEIQYP >gid:500371 VP2682 RNA polymerase-associated protein HepA MTFALGQRWISDTESDLGLGTVVAMDARTVTLMFAASEENRVYARNDAPV TRVTFNVGDVIDCQEGWSLKVEEVLEDEGLYTYFGTREDTQETAVVLREI FLSNQIRFNKPQDKLYAGQIDRMDNFVLRYRALTNQFEQHKSPMRGLCGM RAGLIPHQLYIAHEVGRRHAPRVLLADEVGLGKTIEAGMIIHQQVLSGRA ERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCIEAFADAENPFDTQQ YVLCSLDFLRKSRKRFEQALEGEWDLLVVDEAHHLEWSQDKPSREYQVVE GLAERTPGVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYA PVADAITSLFSGEKLPDEAKNQITELLSEQDVEPLFRIIESNSDEEAKAS ARQELIDNLMDRHGTGRVLFRNTRAAIKGFPTRNVHLMPMDIPQQYTTSM RVAGMIGGKMSSEARAMKNLYPEEIFQEFEGDDASWWQFDSRVNWLLEKV KEKRGEKILVIASRASTALQLEQALREREGIRATVFHEGMSILERDKAAA YFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD RIGQNRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYSD ALIEILASGDTSTLDEIIEESAKLNKELKSQLEQGRDRLLEMHSNGGEKA QQIVEKIESTDGDTNLVTFALSLFDTIGLNQDDKGENALVVTPSEHMMVP SYPGLPYEGATITFDRDTALSREDMHFISWEHPMIQGGIDLLMSEGVGTS AVSLLKNKALPVGTILLELIYAVDAQAPKRSGITRFLPKTPIRLMMDSRG NDLSAQVEFEGFNRQLSPVNRHLGSKLVTSVQKDVHRLIEAGDVLVEEKV EAVRKQAQQDMQQSLNTELERLQALKAVNPNIRDEEIEAIEAQIKELTGY INQAQVQLDSLRLIVVSHN >gid:500398 VP2709 single-strand binding protein MASRGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR EKTEWHRVVLFGKLAEVAGEYLRKGSQVYVEGQLQTRKWQDQSGQDRYST EVVVQGFNGVMQMLGGRAQGGAPAMGGQQQQQGGWGQPQQPAQQQYNAPQ QQQQAPQQPQQQYNEPPMDFDDDIPF >gid:500401 VP2712 excinuclease ABC, subunit A MDKIEVRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQ RRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGT ITEVYDYLRLLYARVGEPRCPTHHAPLAAQTVSQMVDKVLELPEGSKMML LAPIVKERKGEHVKTLENLAAQGFIRARIDGETCDLSDPPTLELHKKHTI EVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGDGEEIIFSANF ACPQCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDDSLS LAQGAIRGWDQKNYYYFQMLTSLADHYGFDLHAPFNSLPKKTQDVILKGS GRTEIEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI STKSCSSCGGTRLRLEARNVFIADTTLPEIVELSIADALTFFQTLKLEGQ RAQIAEKVMKEINDRLQFLVNVGLNYLNLSRSAETLSGGEAQRIRLASQI GAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAI RCADHVIDIGPGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVP KERTPRDPKKTVELLGATGNNLKNVDLSIPVGLFSCITGVSGSGKSTLIN DTFFKIAHTQLNGATTAHPSPYKSIKGLEHFDKVIDIDQSPIGRTPRSNP ATYTGIFTPIRELFAGTQESRSRGYKPGRFSFNVRGGRCEACQGDGVIKV EMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGK TLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVIKTADWI IDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK >gid:500429 VP2735 replicative DNA helicase MAENRNRKPSDSQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVAERVVA SDFYSRPHRLIFEGVKTILESGKPLDLITLSEHLERHEQLEDVGGFAYLA DLAKNTPSAANINAYADIVAERAIVRGLIGVANEIADAGYDPQGRSSEDL IDMAESKVFAIAESRTSENEGPQNVDNILEKTLERIELLYKTPQDGVTGV DTGFTDLNKKTAGLQGSDLVIVAARPSMGKTTFAMNLCENAAMQQDKPVL IFSLEMPAEQLMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILMQK KNMYIDDSSGLTPTEVRSRARRVAREHGGLSMIMVDYLQLMRVPSLTDNR TLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLRESGS IEQDADLIMFIYRDEVYHPDSPYKGTAEIIIGKQRNGPIGSVRLTFQGQH SRFDNYAGPAFDIDDE >gid:500433 VP2739 primosomal replication protein N MTNRMELSGTIAKPPIRSKSPGGIEHCRFWLEHRSTVIEADLPRQVYCRM PVVVSGLRSQAITQNLVQGSNIKVSGFVAYQTGRNGVGKLVLHADNITQI >gid:500436 VP2742 DNA adenine methylase MKKQRAFLKWAGGKYGLVEDIQRHLPPARKLVEPFVGAGSVFLNTDYDHY LLADINPDLINLYNLLKERPEEYISEAKRWFVAENNRKEAYLSIRAEFNK TDDVMYRSLAFLYMNRFGFNGLCRYNKKGGFNVPFGSYKKPYFPEAELEF FAEKAKKATFVCEGYPETFRRARKGSVVYCDPPYAPLSNTANFTSYAGNG FTLDDQAALADMAERTATERGIPVLISNHDTTLTRRLYHGADLSVVKVKR TISRNGSGRNKVDELLALFKAPESDSAAS >gid:500513 VP2819 DNA mismatch repair protein MutL MTIKILPARLANQIAAGEVVERPASVIKELVENSLDSGATRIDIDIEKGG AKLIRVRDNGKGIAKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALA SISSVSRLTLTSRPAAQEEAWSAYSEGRDMQVKLQPAAHPIGTTVEVLDL FFNTPARRKFLRTEKTEFAHIDELLKRIALSRFDVSINVRHNGKVIRQYR AAKNQLQTEKRIAAVCGNAFVRNMLRIELEHQGLKLHGWITTPDGARQQS DLQYCYVNGRMMRDKLINHAIRQSYEMSLKPDQFAAYVLFIELDPHQVDV NVHPAKHEVRFHQARLVHDFIYQALADALAQSSVIDKPQVNESAFHRAEP EERESQPETTPQYSPQSVSTTVPERVYQAIDKTPTYPGRTDYEIKPRDRA PSDSSVREARIADSFKRTDWIESKLAPKPNVGKERHAEPAPSKREVHAYH ELLKTPDFESQQAEQPTSIESVREVSLPQVTALGKALVVVDEQFVLMSSD SGVALVSLPRSEFYRTKGQLTPSEGALKAQPLLVPLSMKLDTDLVRLAQD YQQDFAQLGIQLKARNDKALMVMGVPAPLRQQNLQNLVPDLLSYAQTWMK GEKASTQMLPALIDWLAVQVTTVKSHYTLSEAIQIIAELEQLRHGQLPLD DKTFVSAVDFSATIAKLKP >gid:500584 VP2877 putative DNA polymerase III, epsilon subunit MNWLQRKYWHYKLKGSPYQSLFCAPHKTEFVSLDCETTSLDPNRAELVTI AATKIIDNRILTSQPFEVRLRAPQSLDSGSVKIHKIRHQDLADGISEKEA LLKLLAFIGNRPLVGYHIRYDKKILDLACQRQLGFPLPNPLIEVSQIYHD KLERHLPNAYFDLSLDAICKHLELPIQDKHDALQDAISAALVFVRLTKGD LPNLTAPYT >gid:500592 VP2885 factor-for-inversion stimulation protein MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTEL YELVLAEVEQPLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN >gid:500628 VP2909 hypothetical protein MVNGTYRLDTKAKHIRFEFITRNYKNRFGYDVEVFDENGNINNIIAVPDD TGEILYLNLSEINALEPELKDILENYFLYILPRYTPYSLLTFCEFINLFS REINCGSTINKVIDKLSSEKYIRLIPVLKSLIGFFILSEYEGISLDKAEE ILNLKGYSNNKNSYLTLFTLDEDLGPFTREELRVLNSKLQVESLEVVDRL VLALCLEFGLRPIQIALIKESDFVEDLQLGICYLNIPRVKNNTKYRRLEF TKRIVSLELANLIKKVIENNKDKYGYLAVDSPPLIYKKINRNSTGVRCDN LLKKSRNFPRIERERFFRDINKPDLAFHVAPQTITKRLNAFSAHLPLSPR TGKKFHLNAYRFRYTIGTNAVIEGMTEEEVADLLDHRSTLCVKHYFRYTR EMWEMLENATIKRTEQKHFTAAWCREEDLEGNIYGSEVIETHAFTAIGKC YKKTACYLEPAVACYTCDRFCPNKDKVAHSNALVYLKERQSIVAASSPTS LPKQLSEVIAGCEAAIAYSDGIDVVNIHQGEDNE >gid:500629 VP2910 hypothetical protein MTFSNLGNVKLRLVEVDNELETLSAGYLLQRYENGFKPDTIKKDAQGIQH LYRFCINQGINLHQLVASKSPLSMGDIEEYASFCSVNYASYCSPSKDTYE LVSVDYYKQRMRISWAFIKWLWLFYQNRTKGKLDDLKAAQIQFAAMELGF KAYMKSPINTTISQKTGLSPELRNRFFDIINPLPENTQNPWKSQRVRWRN YALLLTMVLGGNRKGESLLLKLNHFSLSGNRKYFEILKSSDLDYPRSEAP SVKTLGREIELNSMMADIFEHYISVWRKEFKNAKKSMYMFLSSRDGLPLS VQTPNAILKQLINMYPEYEGVLSPHRLRNTFHDVLNDALNLMNAAESPLS RKLKKAPIQEYAGGWKRGSEMPNHYPKGSIQREVARMHFIIQDRILSTTE YAEAKRKEELDHSEAGFYEWMDN >gid:500630 VP2911 DNA-binding protein HU-2 MNKTQLIDFIAEKADLSKAQAKAALEATLEGVTGALKEGDQVQLIGFGTF KVNHRAARTGRNPKTGDEIQIAAANVPAFVAGKALKEACND >gid:500634 VP2915 conserved hypothetical protein MSLENLLQQVRACQICAESLPLGANPVVQAGKNARILIIGQAPGTKVHST SIPWNDPSGDRLRQWLDIDKDVFYDPNKIAIVPMGFCYPGKGNSGDLPPR KECAPTWHKKILEQLPNIELTLLIGQFSQQYYLTNKPKTLTQTVQQWQDW EPEFIPLPHPSPRNTLWLKKNPWFESEVVPYIQQRVHSML >gid:500638 VP2919 MutT/nudix family MLRKGDVNRVANAYWCVVAGSEIWLVDGAVPFGSAEQFSLPEENARQIGD YLGSPVMWINFADLEQDLPLVSLRDCLHFPEPLFMLLSKAIQYGHMTQSL RFCPQCGGRNFLNNNQFAMQCGECRTLHYPRIFPCIIVAVRKENQILLAQ HPRHRNGMYTVIAGFLEAGETLEDCVAREVHEETGIHVKNIRYFGSQPWA FPSSMMMAFLADYDSGELNPDYTELSDAQWFGVKEMPPVAPTGTIARALI EQTISDILSD >gid:500688 VP2957 conserved hypothetical protein MVRRRQQNTSQKKPTTGFVRIISGLWRGRKLPVHDAEGLRPTTDRVKETL FNWLAQDVPQAKCLDLFAGSGGLGFESASRQAELVTMIELNPQAFQQLQK NVASLKATNIQVVNTDALSFLKQPGTPHHVVFIDPPFRKGLLDETVTLLE QNGWLAEDAMIYIETEKELSIAGLPENWHLHREKTAGQVSYRLYERTSA >gid:500712 VP2981 integrase/recombinase XerC MTTTPNTPLPNSLQKPLERFYEFLRSEKGLSLHTQRNYKQQLETMAQHLA EMGLKDWSQVDAGWVRQLAGKGMREGMKASSLATRLSSLRSFFDFLILRG EMSANPAKGVSAPRKKRPLPKNLDVDEVNQLLEVNEDDPLAIRDRAMMEL MYGAGLRLAELVSVDVRDVQLRSGELRVIGKGDKERKVPFSGMATEWVGK WLRVRGDLAAPGEPALFVSKLGTRISHRSVQKRMAEWGQKQSVASHISPH KLRHSFATHMLESSNNLRAVQELLGHENISTTQIYTHLDFQHLAQAYDQA HPRARKKNGE >gid:500739 VP3002 ATP-dependent RNA helicase RhlB MKKTHITEQKFADLGLQPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIA GQAQTGTGKTLAFLTATFNHLLTTPEHEGRQPTQPRAIIMAPTRELAIQI FNDAEPLIASTGLKAALAYGGESYDKQLAKLQDGVDILIGTTGRIIDFYK QRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKERLNMLFSAT LSYRVQELAFEHMHNPEHVVVEPAQKTGHRIQEELFYPSNEDKMALLQTL IEEEWPDRAIVFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKILE QFTKGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRA GASGHSISFACEEYAINLPAIEEYIEHTIPVSEYDASALIQDLPAPIRMR APRVQQRRTNTGGTRSGNRKPQGRRPRQPRQSAPKQS >gid:500744 VP3007 ATP-dependent DNA helicase RecQ MTSTLLAEQSDSPVTPQRVLEEVFGYQTFRDGQQEVIESAVEGKDSLVIM PTGGGKSLCYQIPALVRSGITLVISPLISLMKDQVDQLKANGVAAECVNS TMSREELLSVYNRMHSGQLKLVYVSPERVLMRDFIERLENLPLAMIAVDE AHCISQWGHDFRPEYAALGQLKQHFSHVPFMALTATADDATRRDILERLR LHEPHVHLGSFDRPNIRYNLVEKHKPISQIIRYLDTQKGNCGIIYCGSRK KVEMVTEKLCNNHIRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFG MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISW LRRMLDEKDDGPQKQVESHKLNAMSAFAEAQTCRRQVLLNYFGEYREKPC GNCDICLDPPKHFDATEEARKALSCVYRVNQSFGMTYVVEVLRGMQNIRV REHGHDKISTYGIGRDHSHDYWVSIFRQLIHKGLLFQNITRNSTLQLTEE ARPLLRGDVSLELAVPRLDTAARAAKSDKLTSKNYDKKLFAKLRKLRKSI ADEDGLPPYVVFSDATLIDMAEILPTSYGEMLAVSGVGQRKLEKYADPFL DLIQEHITHHG >gid:500750 VP3013 DNA helicase II MMDPSLLLDDLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSV EQASPFSIMSVTFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILR AHYLDAKLPEDFQIIDSDDQQRLLKRLIKAQNLDEKQWPARQVAWWINGK KDEGLRPAHIDAYHDPVTKTYLQLYTAYQEACDRAGLVDFAEILLRAHEL LRDNKFVREHYQARFKHILVDEFQDTNNIQYAWLRMMTGPECHVMIVGDD DQSIYGWRGAKVENIEKFTREFPSVTTIRLEQNYRSTKTILEASNTLIAN NTERMGKELWTDGVVGEPISVYSAYNELDEARFAVNKIKEWQDKGGALND AAMLYRNNAQSRVLEEALIQAGLPYRIYGGMRFFERQEIKDALAYMRLMA NRNDDAAFERVVNTPTRGLGDKTLETIRRAARDRGCTMWEASVAMLDEQV LAGRAAGALGRFIELITALEDDTLEMPLHEQTDHVIKYSGLFAMYEQEKG EKSKARIENLEELVTATRQFEKPEEAEEMSLLTAFLTHAALEAGEGQADE FEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQ VSRPASSGRFSQTAVKENFNETGFSLGSRVMHPKFGEGTIINFEGSGPQS RVQIAFNGEGIKWLVTAYARLEKL >gid:500782 VP3038 DNA topoisomerase I-related protein MSSKIDNTLFSAHEHALEHEPCPKCGSELTLKHGKHGPFLGCSHYPSCDY IKALHNNDGHIVKELGVPCPDCGNELVLRQGRYGMFVGCSNYPECHHIES INQPEPEKQSQEHHACPECGKGHLVERKTRFGKTFYACDNYPKCKFAVNL PPVKGRCEECGFTLLVEKKLASGVKLQCANRKCQHTQQG >gid:500784 VP3040 Smf protein MKPRNNDSDLAAWLKLSCLPGIGGVKMNKLLAKDTPRNIINSSSDQLYQL GLTNKQLQAWASADKEVDACLTWLATSTNHHILTLADPLYPPLLKQVVAP PPLLFVEGNPTFLSQPQIAMVGSRNASFDGLHHARQFAAALAQQELIVTS GLALGIDGHAHDGALQAGGKTIAVLGSGLEHIYPARHRSLAQRVTENGAL VSEFRPNAKPRAENFPRRNRIISGLSLGVLVVEAAEKSGSLITARYALEQ GREVFALPASINARNASGGNQLIRNGACLVEKTQDILDEIQSLLDWSVNQ SIDLFSTLNDEEELPFPQLLANVGSEATPVDILANRTNIPVQEVMMQLLE LELSGHVVAVSGGYIRKGRG