Gene list
Applied filters:
COG category: Transcription
Gene type: CDS
Genomic element: pNF1
Number of genes found: 13
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Nocardia farcinica IFM 10152, IFM 10152 >pnf11080 hypothetical protein MFTPVELATLRCKVEDEAYSYGGYNRPLEIFNPGTAPRYLTEGPLKSLSV GERFGPTWLLVESYLRAHPDLYDETPSSVEARQAHRSAAAKSLTTEAAEH FRAGRLARARELVDQAELANPYETGTYDGIRSRIDRLAGIVDELGLSRPQ ERFDGLPGGKQAQVSVGDHSFSLEPRGGGRWVVYPKTGGAEDQSTLAEPM PTSEVMPRIRAYLASLPDPQNPTPAAHAPSAATTAAAQRDPGNPTTPGDA PAEPLPIVIEHTAEDTLVRNTDKNNLQLRQALHDAKFNWSRPQRFWYQRR ATDFAVRTRRVGYLRASLTRLGLPFTETNPAREESTTLTAAGVAEAAAPE SAHEQQTTAETQHDSTAESAAAAEVSPTASGTPTPPLSSPDVTGNTTTAT PTSQTESPADRPAGTAEVRVPERPTAPQVDVPRSTQRRIEANLAAARTLQ LVEAESRPPTAAEREVLAKWTSWGAAPQIFDAEREEFRSDAESLRALIGE EGWKQANRTVLNAHYTDPMIVRAMWDHLRALGFTGGQVLEPGCGAGAFIG HAPEAASMTGIELDSTTARIAQVLYPHASIRVESFADTRLPEGHFDAAIG NVPFSSARLHDPVHNAGEHTMHNHFILKSLALTKPGGVVAVVTSSFTMDN KNPAARREIAAQADFLGAIRLPNGTHRRVAGTDVLTDILILRRRDGEARR LGGPFELAVTAELPLTRGQGETESVLVNEYFLNNPEMVLGELRAGTSVYG GLSVEVLDRGDLEQHLRAALARIAERALSEGIAHQPRELASGERRAAAAA PGDPNEFPGHLRTTASGFEVLHTDGTYSELKVPSTQADELRALLDLRDTA VALLENEAASAEDSDEIEALRTRLNQRYDRYVERYGAINRCSWHPTGRVD DAGEPVMSVRRPPVMRVFRDDPHAPVVLALEDYDATTDSAVKMAIMRQRV VAPRSPRLGADTAEDAVAICLDTHGKIDLPVIAGLLGVDDDEARVQCRGL IYPDPADNGRYVPAAEYLSGNVRVKLDQAREAAAANPETYSDNVTALTAV IPPDLGPAEIDARLGAVWIEAPDVQAFLNEILNDDTITVEHTKAGEWKVT GGRRGILSTQEFGTSRVPAPKLAQALLRQAPIRVYDPDESGEARIPNPTE TEAANEKAEQLNERFSEWVWENPVRAARLSEEYNRRFNNLVLRNYEADGK MLTLPGLSKVYTPRPHQRAAVARMIAEPNVGLFHAVGAGKTLEMAMGVME LKRLGLVNKPAIMVPNSMLDQFAREFLQAYPQARILAAGTEDLAGEKRRQ FVARAATGDWDAIILTRGSFQRLEVSRETAHWYFDREIEPRRQYLAELMS GSAKRSVVKRIEDAILKSEEKLKKKLGGPTDPGITFEQTGIDYIVVDELH DFKNLATDTQIESAAIAGSQRAQKLHMVVEYLRDKHNGRAITGATATPLA NSITEAYVVQRYLRPDLLEGAGIRNFDEWAATFGKTKTELEMSVDGNSWN LKTRLVGFRNVPELQRMFHVAADVKLPEDLNLPVPKLARRADGQRAPEVI SVPATETQLEYVRELGHRAQMVKSRAVDPTRDNMLKISSDGRAAALDLRL VKSLGLTPGTAEEQGSPTLTTAEGAAIAGYLHSKSPSPSTARYVALFAQR GRHESQRQESQEIGEEEFGLKLEAAADWMFEKWQAAKDQVYLGRDGQPHP RRGGLVVAFCDLGTPGEDWNAYDELKAKLIARGAPPELFAYIHDAKNDKG KAALFTKARNGSIQFLFGSTSKMGVGVNIQDRMVAMLHVDCPWRPADIEQ RDGRGIRQGNQNEEIAVGRVVTEGTFDARMWAAQARKAAMVNQFMKGSLT VREIDDIGDAALNANEALAIASGNPLVLEKAEIDIEVTKLERLRRAHQRS QSMLQIRIRDANDAIPKLEAEIDAYTRAIEHRRPTKGDAFAAKVSGRFYD HRGDAGDALAARLLKLIEDPRAVWKEFEDHGVAEIAGFTLDARNVPTGRA ALVSVVFSDIGDDVYVTLDKATLQKGGTAVMLRLENAVNGLDKRLEVATG RLETERTERERSELRLGKPFEHSERLDALRERQKEINKELLGSKETETEN ASTDPAAAPGEAESIRSAAMHDAAAMVHQMGGAAVVSGANGITIISDRGG RAR >pnf170 hypothetical protein MIPTVPTADHHAGPAANHNEGVGTLITLKEWAEQRGRSYGSIRNNWTGRD DFPAPKQPRPRTGKGTPAPEYDSDELDAFAERWEAANRPAPFPMPDEPDE FRTLGAIARLLGVDGKTVTQYRETFDEKVEHENRGARTVYRTRGVVEVLN ERRGKGLTRPHLRQSSE >pnf11200 putative transcriptional regulator MPKQPEYLSIAATLRAEVLAGSYDAEPLPGNADLAERFDVNMKTAGRAVQ QLVAEGLVIARPGMRAIATPPELRGTRWPMNGRYARARAARGLIFAGDVN GNVRKDTVSREWVSAPLPIAHLLGVKEGARVFRRHSRTFIDDVATENTMM FFPEEIVAAAPDLETAERIQVVALIEDAGHTVTRTANEIRARHTNPAEQE LFGIDANSIVIEHIHGTYGATDEPLEAVINVRPAHGGAITFDTYEAPLDN E >pnf1320 putative transcriptional regulator MTINADGGCLVETQGLDPAVALFHSLSDATRLAIVRRLACGEARVADLMA GLELAQSTVSAHVACLRDCGLVVGRPQGRQVFYSLARPELMDLLASAETL LAATGNAVALCPNYGTDATTTETTAEVRA >pnf11490 hypothetical protein MSRNPETMTPKFSWTASAAVLAGAALVVAGCSSGGSDHEQTTTPPASTTS FVTPTETTSRVPATPPSTPLTAPAALPAEIGPVDQASVDAVAAAVARIWY GWDTTRDLTQHDAKLRAVPLLEPRLAQLLRDYPPIAGPGADWLDLTARSA VLTVPADGVRPGVEAGAPADTATSAVRLLEVTQKVNTPTGPMPDRHLVVG IALVKVGAEWRVSQVGSR >pnf11520 hypothetical protein MQKLKEGSAMTTLGPAAASACSDKAETPIPYSGSRRVGTPRSAAHRRSTG IRTDLIRVAVAPAVATAVLMTACGVAQAAPSGQPGITGPAEPQEQPGVST APVLPPKPQSQSPLGVILPDPPSHAPSEYETAPPSGGVQVGPYYDTPAPS TPAPQTYYYVEPTPQYRAPAPEPSLGEELLTLHAPAPVPEKPKYWVPVGP ERIGSKRASIPTPDWVPIDVAWKANAYISEAQQATNTALQSVGIAPSRAD ALAGGTVIGAAAGTCIGATVIGVPAAVFGGIAGGLIGGTIGGIAGAAMGT LIPVPVIGTVTSGVAGTAIGAAAGAAAGAAIVGIPAAIAGGVAGGAIGGL VGFVLLADDGSEYTGPAPDGEIPMEEREVPPPGPTLADQFSEQAAVAVDA GEQAVDWVQEQPGGEQVLEQAAAVVDQVDQWAQSEPTVTQAVGVVEQVAQ DVVAAAQAAPETAAVADAVVEAVTEQPAFTPDQLGPLTDAANGALAAVQG LVR >pnf11560 hypothetical protein MTVVRGEGVVNKMTTRFAELSKLVPIPYPWDTREYIARVAEYRGRPIELV PIAPGALSGTGCGTGSALWLELDDSDVIMYGADTEWHADHMIAHEIGHIL LGHGSTGGEPAPADDLPLHELMPSLSPDAIRNVLRRQDYDSDRERDAETF ADMVMVEATLPQRKPSRFRSTFFRARHR >pnf1370 putative DNA-binding protein MGAQQGDLPLPALELPTAVRPRPQTGRAEVSAPEHRWSGGVSLTPGLMTF TGEIGDAPAHAHAAVQVLFVARGRLTLTDATGYTTPALAAIIPPGVVHQV HTEPGTSGFLAFLDPDSATAHAALAQLDGQPRQAATTWVSAATPAPSLSV GDPVTRPVRRSSHPVVAQALRRATDWVGGPPSLGELAADIGISVSRLSHI FTAQVGLPYVAWRRWVRLQLGFAVVRGGGSLTAAAHAAGFADSAHLTRTC RDLIGISPTEALIATGWRPPPARDRAVTE >pnf11530 putative DNA-binding protein MTRRITRGFDPAALKRAREEHPNEDLRRRAEVARLAGVGVATIQQWEAGK KSPQVNLLFRVAAVLGVPMEQLVPIPREQRYLRDWRVLRGMLESDLAART GISGSSIGRLEEGSAALTDENANRLAEALGITATEVRAAYDRARNRAVGA PA >pnf11540 hypothetical protein MPSGHPEFFGEVVKARREYLSLTMAEVRAAGGPAQTTMVRTERGELGKPQ KKIFAKFDTALRWVPGSAAAAYWNRETPVPLELEQPAAPPLNLAGSDVEV PLDQVIALMELQRDLNAAAEARRELSADSVQDLATRLNREVSLIVGRWAT TMLERNRGTEAVHPGLEVIFADALSTPVDPGTPDAEERLYRRWLLGGRSA AGLGEELRQKFERRYRQGGGDLDADQ >pnf11310 putative DNA-binding protein MSPYSRRLHLGDRLRNLRQEQERSIQQVAKEADIDRTLLTRIETGQRRVA ADVSMKVAEHLGVEQHSPLWQEFYALARDAAQSGWWEGRAFRGLSDRQAL PADLEAGASRIRWYDFALVPGLLQSPAYVRARHDATVTNDHSSDNPVEIR ARERRQQEALTEGGPRIEVIVEETVVRRRVVPAPAMLEQLEHLLKLIDAN EQIDFRILPVGGELLGLRAPRSPVSIYEFAAGDPPLVFVESLTDDVLLRD HAEVANHERLWKRLHEIALPPDESRVLIARSAEILAKEQ >pnf1530 hypothetical protein MNGLGTLEARVMDVLWGTSEALTVREILERLPDPYAYTTILTVLTHLHEK EWVVRVMHRRAYLYRPTRSRAEATAEVVRGIIDSSNDPESVLLHLASIVT EAESEAFHRGRTRPRKRSRK >pnf120 parB, putative plasmid partitioning protein MAGRGGRANLADLVGSTGKNSTVDGVNARTSSPAKGPTPEVMVNGAPLEI KLEDLVANPLNPRETMDVDDLASIVEIQLQPALIIGREAYLKLWPELKSE LGDAKYVVINGCRRLEAARKFGRTTLECVRKDEVADSRASLRAASIRENV ERENLDVIEEAKAVEALVSDCDGNGARAGQILGKTKMWVSQRRALLKLTP ELQAKLRAGELAIREARELGRVPAEEQVARWKAQLEKKEREQAGETSGSN SSRRDVDTVKIVKTLKKWDADTAVLASALFVHLDRSGVHELIEQLNQMAT SNEAE