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Gene list

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COG category: Transcription
Gene type: CDS
Genomic element: pHCG3

Number of genes found: 11

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# Oligotropha carboxidovorans, OM5 = DSM 1227

>gid:1151276    nickel responsive regulator protein
MERITITLDDDLLDEVDRMITTNGYQNRSEAIRDFVRAGIQQSRRDAGRS
ENCVAALVYVYDHAARELSKRLVESFHGHHDLSLATLHVHLDDDMCMEVT
ALRGPTAQVQHLAEHVIAERGVRYGRVVMIPAKPAGNRHGSHGHGHSHSH
D
>gid:1151292    hypothetical protein
MNRSLSGRARLFHATSFPIIHIIRRNIASENVESKGLEAGGTVLAERSGR
RRSLNRRLRDPGRGARRRAQEPRLGGRAGMLARGCAGRSRPAVGAGVSGK
ETRKGRPEPRGPQPCNGENPMKLMKVDPRALNENPDPTRRTKSSPQSDAL
LLATIKAVGIIQPPIVTAQRGRGNGFTIEIGHRRVTQAIAAKLDEIEILV
ADPDEEKDALRSLIENVAREALNPVDLWRRIERLVALGWNEESIGTALGQ
SVRQIRKLRLLANILPAMLDHIAKGDMPSEQHLRTIVAATQDEQAQVWKK
HKPRKTDPQVSWSDVARALTKDRMYARHANFGDDLAQAYGIVWQEDLFAP
ADEDSRYTNDVEAFLGAQQEWMTANMPKRSTVIEVTTWGDPKLPPKAERV
YGKPNKSDCTGWYLDPRNGSVQSIAYRMQKPKKDKAKAKGSHASGSDSTA
PASRPDVTRRGMDMIGDLRTDALHEAFARAPIEDDTLTALLVLAFAGGNV
SVASGRNSDHGIRAQQARRLIGDDGSLAYDRETLQQVAREVLTDVLSCRE
NRSNSGVVARVAGSAIGADEFLPNLATEEFLSCLSRGALEASLKGTPVLP
RQRVKDTRAALVAHYADGRFVYPAALFAPTAEIVAEWAEDNAFVDEDDDA
ADDIDAGDDEHGGYAEAAE
>gid:1151256    hydrogenase-3 accessory protein
MHTARARTDAGTQTAGSPPKRVVPIETDILARNNKLARLNRQRLAEKGIL
ALNLVSSPGSGKTTLLVETLRKMAGDNISVIEGDQETDNDAARIRETGVR
AIQINTGKGCHLDAAMIGDALDRLQLRDRGVVFIENVGNLVCPAGFDLGE
DSKVVVLSVTEGEDKPLKYPHMFAAASLMVLNKIDLAPHVDFDIERCETN
ARRVNPNIDILRLSARTGDGMEQWLDWIAARRESPRPRANALAESHRAAS
DTTATPEPR
>gid:1151288    putative methylase protein
MEDAVGEADYASLARCTQYAHFTPEFIVQAIWSGLQRLGWRGGRILEPGI
GTGLFPALMPDGLRDVSRVTGIELDPVTARIARLLQPRARIIAGDFVRTE
LPASFDLAIGNPPFSDRTVRSDRAYRSLGLRLHDYFIARAIDLLKPGALA
AFVTSAGTMDKADSTMRECIAKSADLIAAIRLPEGSFRASAGTEVVVDVL
FFRKHKIGDAEGDLSWLDLDEVRPATDDEGAIRVNRWFVKHPDLVLGAHA
LASGPFGETYTCLPREGEDLAAAISTAIQFLPEAIYDGEPEVIDLDLEAL
DDPSLDDLPSDRHVREGSYFFDKARGLMQILDGEPVAVKMRKGRSGDGVP
DKHIRIIRKLIPIRDAVREVLKTQELDRPWKDAQVKLRIAWSNFVRDFGP
INFTTVSLTEDEETGEVRETHRRPNIQPFLDDPDCWLVASIEDYDLETNT
AKPGPIFTERVISPPAAPVITSAADALAVVLNERGRVDVDHIAELLHRDR
DDVVAELGSAIFCDPADGSWQTADAYLSGPVRDRLKAAKAAAALDPVYER
NVAALQGVQPADLRPSDITARLGAPWIPAADIIAFVKETMDAEIKIHHMP
ELASWTVEARQLGWMAAGTSEWGTDRRHAGELLSDALNSRVPQIFDTIKD
GDSERRVLNVIDTEAAKTKLQKIKDAFQRWIWSDADRTDRLARLYNDRFN
NIAPRAFDGSHLKLPGASGAFVLYGHQKRGIWRVISSGSTYLAHAVGAGK
TMTMAAAVMEQRRLGLIAKAILVVPGHCLAQAAREFLALYPNARILVADE
TNFTKDKRHRFLSRAATATWDAIIITHSAFRFISVPSAFEQQMIQDELEL
YETLLTKVESDDRVSRKRLERLKEGLQERLESLSTRKDDLLTISEIGVDQ
IIVDEAQEFRKLSFATNMSTLKGVDPNGSQRAWDLYVKSRFVETKNPGRA
LVLASGTPITNTLGEMFSVQRYLGFAALLERGLHEFDAWASTFGDVSTEL
ELQPSGKYKPVTRFATFVNVPELIAMFRSFADVVMPEDLRQYVKVPAIST
GRRQILTAKPTAAFKRYQVLLDARIKAIEERDRPPEPGDDILLSVITDGR
HAAIDLRLVDSDNDNEPENKLNKLIANAFRIWRETAKNTYVRPDGKPFEL
PGAAQMIFSDLGTINVEKTRGFSAYRWIRDELIRMGVPPSEIAFIQDFKK
TEAKQRLFGDVRAGKVRFLLGSSDTMGTGVNAQLRLRALHHLDVPWLPSQ
IEQREGRIVRQGNQNDEVDIYAYATEGSLDAQMWQNNERKARFIAAALSG
DTSIRRLEDLGESQANQFAMAKAIASGDERLMRKAGLEADIARLDRLRAA
HIDDQHAVRRQVRDAERDIEFATRRIAEIGQDIARLVPTGGEAFAMRVKE
RRYSERKEAGRALMKELLTLVQLQHEGASVIASIGGFDVEYVGERIGRDG
YCYTTRLMRTGTNDEIDLPVTVTPLGAISRLEHAVGDFEAEQEHFRQGLI
DARRRLAAYQSREGGDFAFAAELADKRQQLCAIEAELANDSESPANRIAA
>gid:1151195    hypothetical conserved protein
MGRVEAVIFASPEPVTREILARVVGGDCNIDLIIDDIRDELRGRPYELVA
VAGGWQHRTRKVFATAIRTATGLGDQVRPLSQQESLILLCIAYYQPITRG
ELSQFFGKEVSRDLIAHLRGLGFIASGPRAPRPGAPYTYVTTNGFLSHFG
FNTLRDLPDMEMLEDAGLLSKEKLLAGDIPPLAETAAADDDDMI
>gid:1151242  cbbR  rubisco-operon transcriptional regulator CbbR
MAATGSVTGAANRLHLTQPAVTLQLRSLQNLAGLPLLQRTSDGMILTGAG
QEVLGLLERIEAAVANCTTSLDMIAGHTGGRVAIGAVSTAKYFVPFVIAG
FSKLYPQVEITLKIGNRQELREALRGYELDIAIMGRTPAEIQVETHLIGD
NPHIIIAPKGHWLEQDFGLAIADLSHEIFLTREQGSGTRLLMEQLFEANK
FQPIIGMEMSSNETIKQAVTAGLGIAFISAHTVATEIEDGRLVMLDIAGL
PVIRQWFVVRRYDKTLLPPAQAMLDFFAAEGAKYLPKAPQKRL
>gid:1151274  hypB  HypB like protein
MLAKNDALAARNRAWLAGREILAVNIVSSPGAGKTTLLERTISDLKNENT
LYVIEGDQATANDGERIRAAGAAAVQVNTGMGCHLEADMVAQGLAALKPP
VGATVLIENVGNLVCPALFDLGERAKVVVLSVAEGEDKPLKYPHMFRAAR
MMLLSKSDLLPHLDFDVAKAVANARKVNPDIAVLQVSSRNGEGMAEWYEW
LRTQATEARADAAIL
>gid:1151204  raiR  transcriptional-activation protein RaiR
MHGSERRRCHTGSTTMSIAQSESRRLLELEHLYIQLREARFQAEHLQLTE
AAALINITMLGVVGTLQLAERRAPANELIKSGQEASLEPPANLPSCGVRL
VILSRRETQCLQMLAEGIAPKNIAATLRLSEAAVRLYLQRARKRLNCATT
LQAAVKASTLGLIETH
>gid:1151189  repB  replication protein B
MSKGPSKSIVGNFGKFISGEASPSSPAETPSPPRVVRVGAGVIGQAGRSI
QQLKDERDRLQELLASGNGGTVDIDPNLVDPSPFDDRLPDDDPETFETFK
RSIAEEGQKVPVQVRRSPSIEGRFQIVYGRRRLRAAKELNRPVKALIVEL
SDRDLVVAQGIENGQRQDLTWIERALFAQTMDEADIKPRDIYAALGIDGA
ELARMRAVYRAVPVDVIKLIGRAPKVGRPRWGALVAAFGATEGKAAAVLR
QTLSADRVSALSSDERFSHALRALSGASTSPQREEMPLEAAGGRPVGKAV
FAGAEVRLIVEKSRAEAFTDFLRVELPALMERFDAGDSVTENPAKSENSV
S
>gid:1151206  rhiR  regulation protein RhiR
MTLKDQALGFIEASRSARTAAQILDGAMAAVAGLEIEGMFVADVPAPGES
IAPHILLRGWSELWIERYVVENYVHFDPVAGELKRRLAPFTWTEACNRRL
SHHEQKVMSEARDFGLLDGVSVPVYDHRGRQSCVSFSGRRLKLDQEARRR
FT
>gid:1151314  traR  probable TraR
MYKLHVLDGELDNLIDALELARDQRMIKQALRHFCESNGFDRFAHLNVRS
TETCVLTTYPAEWQRLYFDKKYALIDPVVISAKRNMEIFSWSQDDASKYS
KDVKRFFREADDFGIRSGLSIPIRTPFGGTAILTLASEQRRVDFAGIQDT
VRAMNAVAFAHAHLNRVAAAPCRRTKYELTPREVTCLTWASLGKTMSEIA
DLLQIDVRTVRNYLDLAREKLGGSNIAHAVRLAVMQHLI