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Gene list

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COG category: Transcription
Gene type: CDS
Genomic element: chromosome 2

Number of genes found: 31

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# Photobacterium profundum, ss9

>PBPRB1794 hypothetical protein
MINKDIPAVLLNDVSVNLELSFNTIATFYQQRDLLYVGKPHRLRFSALIY
ITQGEGHHFIDYKRYQLKPGTLLTLGKHQVHHFSEHCSVEGYVISFSNEF
LHSGGDDPYQEVMATAVEEVNCITETADNLSGLFDQIDQEYHREGSSYKD
EIIRNLMRALMLKEIVPNYQALCNNTSLCQKDINYHALKKYIEKVFSQRP
SVGDLAKIMGKSIKQLDKIAKDYSGRSVKELIDDRVLLEAKRLLAFSQYS
ILDISLQLGFKEATNMTKFFRRHTSLTPKDFRDLCRTNVAKRVS
>PBPRB1698 hypothetical acetyltransferase GNAT family
MFGVSCLKSLSTMIRIAENKDYASLVSLFIEENEHNNDVAPDRVANTRDV
LSQAELEEIISDTSTYLGVYEHDGEVSGLILGTHHTIEAKRWLPERNFVY
LEELIVTKSMRGNGVAFKLVKSLETWAETFGANCIDLNVWYKNDLARDFY
KRLGFEDKQALMSIRINS
>PBPRB1669 Hypothetical transcriptional regulator
MNTKGKTIQSLERGFVILEALSLAESPLFLQAIAQSVKLPKTTVHGLLAT
LVKLGYVERTGQAYQLGLRLRELSKPLEQRDESIRRHFYPLLKKMAQFSN
NTAYLAIQSGADEYLYIDAIEKDNPLTIRSPRGRRESLIDSAIGKIFVSF
NPQLQRALRIQGVLTPSIETEIEQIIRQGFALDLEQAEPRLHCLAIPLYM
NGELVAVAGLSGANDELTEAKLRHFAQVFLN
>PBPRB1690 hypothetical protein
MYTRQIKPAHQLSPYIAHFWLWDQNHTFALPDMLPGTGVEMLFNFGDALI
IQTNQQSRLRSNDCIVICPRKSLIQIQPTGITKTLSIRFRSAGFFTLFGL
PLTELSDQISPTSHLLPSNLLIQLVESKSDIAKVTLLEQWLLQQMVKIKN
QDSALQWAIDKIYYQYHNDSINEVKNQLKCSERTFQRKFKIFTGVDAKYF
ERTARFQSALKTLLAAHSNQYITVAFDHGYYDQPHFIKDFKYYTQATPSE
YLTERNFSLNYYTTT
>PBPRB1648 hypothetical transcriptional regulator
MFPFKFGVGHRVAGWERRNSEPRLNYLQQRRGTKLSPAGKAIYPEVQRFV
NHMATLERVVYEVAKRQSGFLQIGAVSTAMLDIVPSMLNYMKKDFPDSTA
FVREIDSVEATADLASGKLDMAFIRWHGEVNEGISIMPLVEELLAVALPK
EHYLADQHTISLSSLIDLPLVATSRSISPAYFDLITSSCNAQGYGRLPCI
TIRYGDMLIWCDEPWAFICRYNQQSSYIRTRASVVVNFWYRLSQCSVGDI
GNVWFKSIDATVTLAITSNSSFRCCLFNLVWPTFTKNAFNVT
>PBPRB1899 ACT, hypothetical protein
MKLDDMELFVKVVEQGSFTKAADYCEIPKSTVSRRIRDLEQSLKTRLLER
TTRRLHLTEVGEAFYHKAQQILKEVETTEKEIAQKQGDYSGKLTVYAPDC
ILELCVDHVAQFCQDYPDISLNLHSDSQPQHLMAEKRFDLLLNIGTQSDS
SFIARPLATLSYDYFASPDYLAIDGEPKTPADLHQFSTLTLNQNNQKAME
WYFNQQELPLTHKCTVDSPYVLRALAVANQGICCLPTIMVSNEIQANKLV
RLFDGQHAFQQVLYGVYHSRRYVPNKVKILLDDVEMQLQARIDSIEGSIG
>PBPRB1636 AGR_L_32, hypothetical transcriptional regulator
MDFATRLELLLEVSEHGSFAKAADARNIDRSVLSKQIKNLEDTLGLRLLN
RSTRSLSLTTAGYEIVKQAQRVRDELEQTRRLADTFHHEPKGHLRISSST
MFGRIYIQKAIKTFMNKFPEVSVELVLDDRKVDIIGERFDVVFRIGSPKD
SNLIARKLADNHTAILASEDFVAKHGMPQTPQELVTLPSVTYSNGTFTTN
KLSIAISPEDTEIKTFNTHGRYKVNEAELILDGIQAGLGYAEVGLFMLPK
NIKEMGLTPLLTNHKLPLSHGGIYAVYSHRNQPPLVKHFIETVQEKIGTP
PVWESYIDDYFTLYK
>PBPRB1643 ATU2187, hypothetical transcriptional regulator, ArsR family
MTSLTTKRSYQAMLDTNEILKSINNPVRRNFLHWLKSPHDHFNLEKQLVD
AEGEGVCVSIIQEKSGLSQSTVSSYLTNLQRANLVTSKRIGSWTYYKRND
EVIETFLQQLTDSL
>PBPRB1727 BR0234, hypothetical transcriptional regulator
MSKKLIAEKLDRSVNEIFRMLQVLEDKQYISFDYDTSSYTLTLKMFALSN
QHSPIALLLKQAKPLLEKLCHKVNQSCHISMYSNGELVVIAKQESPYKMG
FSLQVGSQLNICSSGSGIVLLTFSDEVIRHRILNTIDDTEDEKQTALNEL
DLTRLQGYFVGSSPQISGITNISAPVFDVYSGVMAIITIPFMTLNSNTVH
HHIENIEFTRNELLTIANKLSQNL
>PBPRB1891 CV0696, hypothetical transcriptional regulator
MSLIHMRHLKAFQIFHTAATSRSFTEAATKLCLTHGAISKQIKVLEDYVG
KPLFVRHGRHVSLTSDGETLAHYTQDAFSTLQIGIDKVMMSSHTAIDVSC
EPTLTMRWLMPRLVDFQDQHPDIDVRLSTAGGPVNLQRAGFSLAIRRDDF
VLDQDYDKVHLVEEWVGPVCSPEYWQTICPSEADQNTPLHAAALRLLHTH
TRATAWQTWATDAEQTVLLDGQHRHFDHFYFCLQAAIDGLGIAIGSYPLV
KDDLARGALIAPFGFIPSHHNYVVYKERHTDDPQHTAFISWLQQQLSQMI
PTDNIN
>PBPRB1594 DSDC, hypothetical transcription regulator LysR family
MLAGLATFETAARFGSFTQAAEHLHITTGAISQQISHLEQELSFVLFERH
SRGIHLTDEGNQLYRVVNQSLADIRDVINQIQKAHHADGEIHLKLTPSFA
FKWLVPRLHDFYTQYPDIKIHTFAEGALVDHNDTNFDLAIDYGQTPYIQT
RNKSQISLLMAEKLLPVMSPDYMKKFDWNNPQDTSQNIWEKVRLLHDAMP
WRHAAKDDEWCFWFKENGLTPLNLNTSRQHGHYFNRTDMAMAAAAAGLGV
ALARCALVEEDFSKGNLVSPFEPLDAKAGYYLIQHHHSPAIECFKAWLRQ
QVNRYGCSGSGTCL
>PBPRB1747 ECS0359, putative transcriptional regulator
MPEIRRPQLVEATMSVIDEVGLSNASVALISRKAGVSPGIINHYFGGKHG
LLEETMRTVLRQLSATSIEHLRAVDSNDVTARIKAIVAANFDGYQVDSKV
TKTWLAFWAQSMHDGDLHRLQRVNERRLLSHLRYELKQVLPAEQALFVAQ
GIAALIDGIWLRGALNPKGVCPEKAQQIISDYLEKQLASHSN
>PBPRB1657 EF2774, Hypothetical transcriptional regulator
MKAEINSDNRGRKSVVNACTEPCSIEKGMRVLGAKWKGSIIYHLKDGPVR
FNDLARMLGGASKKMVDQRLKELEDENMVLRKVISDRPIAVSYELTDFGR
SALTILDDLRIWSETNQIEVRK
>PBPRB1674 PLU4789, Hypothetical phage repressor protein C
MNINLQDPINMSISQGEKLKSIREAECLARTAMAKMLEMPYSTLTSYERD
TTTMNYNVICKLLTHDRFIKYSLWFTTDQTAPEAGQISPDLTHCGPEKRT
SGRSGKKTG
>PBPRB1897 PP0807, putative sigma-54 dependenttranscriptional regulator
MQTTLDQAMLQIALDLNLNLPSGHHYKRLMQSLQSVLPCDASALFILDDS
GLLSAAAVNGLSDEVLGQKFDPQQHPRLHAILTSREPVRFPATSTLPDPF
DGLLKNDPNRSVNVHDCMGCSLYVEDHLVGLITLDAMQVGAFNCIDDITV
ATFAALAAATIRNVNQVEALRKSHRQQKNMNQVLIQEARNKGGELVGVSP
EIQSLRDNISMVAYSDYAVLISGETGTGKELVAHAVHSNSSRATQPMIYV
NCAALPESLAESELFGHVKGAFTGANSHRAGKFELADGGTIFLDEIGELP
LLMQAKLLRVIQQGEVQRVGADKNLMVNVRIIAATNRDLTEEVAAGRFRS
DLFHRLNVFPINVPPLRHRQGDIAVLSGHILDRVRTQFNVAKLQLHPKAL
TALTHYSWPGNVRELEHTLMRAGLRAIQAQQSLILQEHLSDEVSHTYSYS
AESEANDLPTTSFELRGAVEIYQTKLISHALQQSNFVWAQAADFLQMDRG
NLYKMGKKLGIEPKELRTAELV
>PBPRB1641 PP2425, hypothetical AraC-type DNA-binding domain-containing protein
MLRRPLHHYSKIKNHFESTQKQTSTSESSIRREPIDLRLRRACERLMEAL
CDDLEAKVLGEALLEEVVFFALLSKSGDTLFTLADQEGKHARIASVLQHI
HSNYSKPLNVSELASSASIECLFFPHGI
>PBPRB1860 RS02618, hypothetical transcriptional regulator
MQTKNNKIGFDLNTLEMFARVVACHSFTQAAAELEITKSTISRKIAELEK
HLGTRLLTRSTRTLVLTKEGKTFYQSCAHIIELIEQTELEVMASHDLIRG
PLNIVMPVEVGNGLLGRCMKEFMKLHPHVTIHLELSNRKVDLIAEGIDLK
VQVGELDESSLIARTFHYSTRILVASPEYLAEYGTPIILGDLKAPHQQIK
NSSSIRTADKNVLAGLPYRFNVNTINSLLEACLDGFGITFMPEFICKEHI
VSGRLVHVLPDVYSAQIPVSFVYPERKLISKRLREFIDFTIMRFEQEVTL
REVNKI
>PBPRB1652 SF0194, Putative transcriptional regulator, LysR family
MESRMQTRSDDLEILLTVVDSGGFSAAAEALDIQVARVSRAVSKVEKQLG
VSILNRTTRRVELTDEGRQFVEAIRVGLLHIQQAEEELISRGELPKGRLR
VDAASPFVFHQLVPLIKPFHEVYPDIKLELTSNEGFVDLLEKKTDVAIRI
GKLTDSTLHARPLGKSLLFIVASPEYLSRRGFPQYSSDLSSHDIIGFAGA
KVLNSWPLKGFKALEPTFTSSNGETVRELALAGNGIACLSGFMVKKDIEE
GRLVPLLEPEKLSNTDREQINAVFYKSSSVAKRISAFIDFIQPKLSL
>PBPRB1761 SO3783, putative ATP-dependent RNA helicase
MTGKNLIAAAQTGTGKTASFVLPLLEKFSDMPPIRAKRIRALILVPTREL
AVQVDANITQYSKHLSLTSLAMYGGVDYKDQKQRLIDGVDILVATPGRLL
DMYTQRALHFDELEVLVLDEADRMLDMGFIEDINKILERLPKERQNLLFS
ATLSDQVRVLAKTAVERPVEISVSPDSATTPQIDQWLITVDKDKKSALLS
HMIKENEWKQALIFIQTKHGAAKLVSQLEKRGIAAEAIHGGRSQAVREKL
LNDFKSGELGLLVATGIAARGIDIDDLTRVINYDLPDQADDYVHRIGRTG
RAGATGEAISFVSRDDFRHLCAIETRLGHLIVRKEIEGFVPQKEVPASIL
NYVPETKIAARRKNFKNKQNGQDKPTSHAIPKGRR
>PBPRB1592 STM1598, Hypothetical transcriptional regulator
MAPQQTRYHAVATEIQQQIEQRIWLPGDRIPSIRVMTKKHSISPMTVLKA
YELLETEGWIYAKPKSGYFVTAHLNRLAEPQQMMPQVVNRSIKINAHIFD
VLTACKRPDVMPFGSAFPDPDLFPLKQLGRALAQTMKTMPAQSTVTDLPP
GNIALRRAIAKRYIRDGIDVSINDIVITSGAMESLGLSLMAVTQPGDTVA
IESPAFYGALQAVERLRLKAVEIATHPRTGMSVNALEAAIKTHDIKACWL
MSKYQNPLGASMPDENKIAINNLLMKNTIPLIEDDVYNELYFSESKPTPI
KAYDNKRMVLHCGSFSKCLAPGFRVGWVVAGQYAKQIEQLQLMSTLSTAV
PNQLALAQYVLHGGYDIHLRRLRRQLKARQQQMLDAIEQYFPRETQITRP
EGGYFLWVVLPKHINTSDLLQQLLDVHNISIAPGSLFASDDRYKNCMRIN
CSYPWNERTQQALKTVANCIKK
>PBPRB1774 T4109, hypothetical protein
MIEQVNDTDVSDIIKLISKSIKTCIDVPTAEADGLIACSVDEILWWKCHQ
ESTAHYIYRIDDKVVGTILIKDFCYISNLFVDPDFHHQGIGKQLIFHALA
ICKRCSPQSTVKLNSSFYAASFYQKMGFEQIGSAKDFPGGCIPFERVL
>PBPRB1875 T4556, putative transcriptional regulatory protein
MGDRLPPERDIAERLDVSRTVVREAIIMLELENLVEVKKGSGVYVLNIPS
ETNSRENVISDEAGPFEMLQARQLLESNIAEFAAIQVTPGDIVKMRVALE
LERNEIASESENCNGDEQFHLCIAEATQNSVLVDMLKHSWARREQSPMWK
KLHSRINDQAYREEWLGDHAKILSAMQRKDPIAAKNAMWQHLENVKQRLL
ELSDIDDPNFDGYLFNSNPVVLLGDDK
>PBPRB1839 VCA0689, conserved hypothetical protein
MTMYTEMFKSFSEQTEKTLAPYAKFNKLFSKNVEELTELQLTAVRTYSEL
GLSQLKAVGEVKDMQSLAEFNGQQLETLTKLSQQLMEDSKKFSSVAQTFK
TEVEELVAENVKEVTPA
>PBPRB1802 VPA0315, putative transcriptional regulator, LysR family
MRAVQCFESVARFNSFSKAAEALNVTQSAVSHQVKLLEEYLGEDLFIRQG
RRLSLTVIGERYQEEINSALISISHASQKLREGEDGKVRLAIYSTLAVKW
LVPRLDNLRQLHPEIDLTLNMVADEPECSDQVADCFVTAYPPSRNFVSEF
LYKEQLYPFCSPKLWYEMQGKPLPEALWEQSLLSVRSIFKDGTEKKDWRL
WCELGGFELPDDVKVIHFSHMILAAEAAKYHQGIAFLNDYFMTDQDRQQD
LIRIPMHELPTGDSLYFVYKKSRAKQREIKILSQWLKQQCYD
>PBPRB1779 VVA1052, putative cold shock protein
MSSVFPLASRTFNNSTSWQYRNSANFLMNFYKGHIMSNTTGIVKWFNEEK
GFGFITQDNGGADVFVHFRAIASEGFKTLAEGQKVSFEVEQGQKGLQAAN
VVAI
>PBPRB1858 VVA1052, putative Cold shock-like protein
MSNTTGIVKWFNEEKGFGFITQDNGGADVFVHFRAIATEGFKTLAEGQKV
SFDVEQGQKGPQAANVVAL
>PBPRB1787 VVA1234, putative transcriptional regulator
MVQMIKKQIGSHMLDIHWLNTFVTLAKLEHFGKTAIKLHMTQPNVSLHIK
QLEKSTHVKLIERNPFRLTQAGARLLQSAQNTLMELQTCQADLNAINDLS
QGTLTLAASDIISRLLLISPFQSFKKEYPGIDLSLLNTTSAQAADLVKSA
KADLGFVIAQKESQPLHFTELHQVKWCALGNGLKEEPTLILLGHDTRTRD
LIDLALPSLQLPSYRVMEVGSVDAQIDWAEAGFGVAIVPAFSLHPKLNLQ
TTITPLPDFPTTSLGYIVRQNQVLSRAIKQLLHWVAEEIQRSQHRA
>PBPRB1682 VVA1249, Hypothetical AraC-type transcriptional regulator
MSLIPLSEVMIWLENIERKTNNPAYMIDIASELKFSNMGYIGEWFLSCPD
LSLAFRRINYGTSCLQSGTTFHGEQSGKMIKWCYNSSKAKGRARLHDSLR
VAIMYMHALRYYMGEKYCPISVEISGPPCGKGKAEAFFGCNIQWNAPETK
VWIDMAILVTGNKKEFSVTRPIMMSNLQLDDFLNMPQPQDTAKVMFELVS
YARYYGRPNVDFVAKLIGLSRQQLQRRLHEYGWNFTVITSYVLCNLAIKY
MMEGMKIADIATDLGYTNTQSFCKAFQKYRGVTPYEYQQKLLERSRH
>PBPRB1776 YPO1029, hypothetical transcriptional regulator
MNGLRAFEASARHLSFSIAAKELNVTPAAIGQQVRLLEEWLGIKLFNRSV
AGSSRLTLTKQAIQALPEITRGFEHLSSGLSLLKKPTSNHLLTVTVSPAF
AAKWLLMRIDSFQLQHPEFDLRLDTNTRTVDYFSEGIDIGVRYGKGNWAG
LSTALLMTEKVFPVCSPDLIQQGLNKPEDIQHFPLLHDQSLPEDSGFPTW
QGWLESHNIMGVNTERGLRINNSASVIQAAVSGQGIALGRSVLVKDDLDC
GRLIRPFADSQSPVQLAYYVVWKPEHDNTEKVQAFRLWLQQQAKEIT
>PBPRB1738 Z2874, putative transcriptional regulator
MEKVTQPEAVSSVLKVFSILQTLGDQKEIGVSELSQRLMMSKATTYRFLQ
TMKTLGYVAQEGEADKYSLTLKLFELGAKSLEYVDLITLADKEMRIISEQ
TNEALHLGALDENAIIYIHKIDSGYNLRMQSRIGRRNPLYSTAIGKVLLA
EREETFIRKTLSDVNFIKHTDRTLENTNQLLSELSIVRDQHYAEDNEEQE
PGLRCIAAPIYDRFGSVIAGVSISFPTIRFDEKRMSYYVGLLHQAGKNIS
GQLGYQNYPSN
>PBPRB1763 Z4435, hypothetical protein
MSIMNVEVMQEVSRQIEATMPWIHGITSRKQYDELIELMDSLVEDYDANQ
TLIDLMFPVIEQYESKGEEFQAFNAHIDSINPAVSMLRLIIDQNGLTQSD
LKAEIGGKSSVSMILSGQRSMTLQHIRALSARFNIPTYMFV