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# Photobacterium profundum, ss9

>PBPRB0215 hypothetical protein
MSRCEEKKQNAINKTVELCSQYGFHGTSMDKITAATGLSKATIYKYFLSK
ENLIAQALDAYGKSAIEHLTKVMNDDSLSLEEKLSERFETLRQSLAINAF
NGCYFQLAHSEFCNAEENITDICTIYKQQRVSMVCNLLETHNVENAQEKA
VKAELIFNGLIATLQISKDPTLIDIARDMYMDVINS
>PBPRB0169 Hypothetical protein
MIMNKIDCMRAYIRVTHLGSFTAVADELNVTQGSISKKIAWLERDVGFSL
LYRSSRRVELTAQGSSYLTYCEQMIEEMELTEAALKGELDEVVGELTLSV
PSAMATRLLAKPIGMFMTQNPKLVINVSVNDRVVNLIESGIDIAIRASEL
ADSAYKARFLFHNQAVYFASPDYLKQHARPVTASDLEQHECLTYSLASPS
DIWLVKQKDSLVQKVKVNEVFKSDSAEMLLAMALSGHGVGVLPSWMVEQC
LDNNQLVQLLEDYTATSLPMYAVYKSGEYQPYRIRAFIDFLVEFFQS
>PBPRB0224 hypothetical protein
MRSKSEFMPEEPIKHLLVLMAEKADPEHYGNLLRIVIREYFIPKILDHIH
APKNLEEAFNSLATAIIHDSPSAKIAIEHFKGTPWFCRYKTKEDTKGFFW
AEVFAILFTIEFINVMTKTTWLPNSVAVQSSNIEPMLEVFKGQSIQFVSD
RNVTAIELSDTILNTPVILPASFSEKKASSTPKKRTYIETVYLALTPYIG
QPSMNVNEAAKVLNTSARTLQRRLEKENTTFKIIRENIMLATSCRLMEDA
RYSLTDISAKLGYADIAHFSRAFKKLTGFPPKDYRKRFLDRSTS
>PBPRB0101 hypothetical protein
MLFDRKGKYPEVTAEGLNLYDSAKVVVDSAERFSNNALQLSMGVPANLTL
ALDQDINVDHVLASLPEFQKKWPHLRLTVVNLSSQDIFEGVKQGTIDLAL
SQTLEGQSCFYEFMAIGHSNAKIVVGKGHPLARKRHISNDQLAMVTQILS
SSLQNQPNMMEISRMSPYVWFAQGYHGVVDMVRNNLGWSLLMCGNMPLPE
GVTELDAEFAKTEFFIQYDAIWPKNRSLRDVDLYFIEAFKTLLKSTV
>PBPRB0045 hypothetical protein
MDNIAFDLRQLRTFITVVETGSFSKAAQQLNQTQSAVSQLVQSLEQILDS
KLLDRSKRPIKLTLTGRELYEQGSKLLAESRKLQDWMHSIEKGKLPRLRI
GMVDSVTQIAGIELLKYLQPKVAHINQITGTAPELLTSLQSGKTDIIISM
ANQDIPQDLAMFPLLGEQYVVVTPANWETKDIQWLARNKPYIAYENWTPT
GTQTNNWLRWRNYKPQNQFSLDRADNVLGMVAEGLGWSLSSPTFLARQLE
LLDKLECQPLPAPGITRQLAVISRKGEFGSLIEEFVEDIRNIVLNQKVQE
VKRRWNWINVEGL
>PBPRB0251 hypothetical RNA polymerase ECF-type sigma factor
MKLEDVWSAYRSQLKAFLHSKVSNSADVEDLLQEILIKTHNSLGSLQKGD
SIQSWLFQIANRTTIDFYREKGRTKELEAEELWFGKREENIKADLSPCIE
PFLKALPDDMAHLLRAIDLEGQSPKAYAQELGLSYTTLKSRVKKGRTALR
GLFEGCCHYSLDQHGSLIDFDQKSNKCKKC
>PBPRB0042 hypothetical transcriptional regulator
MVKVAEIKQENIILAAIALFTEKGLEQTSMEAISKKAEVSKRTLYKYYPT
KDSLFSMIIERLFSNIHTIADVQFNTTTSVKSQLTAIAETEVKLLCSDEF
LSLARMVLSECMRSSKSATIMQEKIQDLEGCIGLTQWIEAGIAANKLDVA
YPKVASEQFFASIKAIVFWPQILVHLPPANAEEQQIAIETSVTQFLCTYL
KE
>PBPRB0010 AGR_PAT_, putative transcriptional regulator, AraC/XylS family
MMSKIYRPLFDDDNPPGDIFFGHEVFLPNTTTQKHKHSWGQLQLINGGIL
ELHAEGKHFLSPSEYAVWVPAGIEHESHMRRSMNYCSMNIIQPLAIRLPN
YACLLEVDPIVSAIINSLRERCVSVPKTPEDHRLVRVLLDQVINAKEHQQ
FLPTSDDKLLKPILIELEKNPTNNKTLAQWAKTIHTTERTLARHCQDKLG
MSFTEWRQRRKYVYSLHLLRKGLSIKEIALTLGYHQASPFITLFKKHANC
TPEQYRQRLGINQA
>PBPRB0234 BB1351, putative transcriptional regulator, GntR family
MLEAVDTISVLSTDTQLTSITAECEAGVKELTKSENLTEQLIEFIVSGEY
QAGSKISEPELARSFGVSRGPLREAIMRVEALGLVERVPHVGARVVELSQ
EKLIEIYAVREALEGMAARLACINITDKEIDALQELLEQHQRYIEQVDGA
SYFHQQGDFDFHYRIIKASRNTKLISLLCDELYHLLRMYRFQSPRKHSRP
TTALSEHIQILAAIRERDGELAELLMRRHIMRSRLLIENQLTEDINK
>PBPRB0044 BH1582, hypothetical protein
MEVHIAKTQQELERAATVLVQLRPAFNIASLCEQIIQQQKQGYQVAYVEL
DGRVVCVAGFTVNLKLAWGKSIYVDDLVTDSDTRSVGAGKHMIEWLKMYA
KNEGCREIHLDSGVQRYGAHRFYLREGFNITSHHFMLNNVSD
>PBPRB0281 CV1435, putative transcriptional regulator
MRKINDVDLKLLHLFITIVDSGGFSAAQFKLNMHQSTISTKMNDLETRLG
MTLCYRGRRGFRLTSDGNKVYQLSQTLFDDISHFENQLDNIRDVSHGHIR
LALTDNLATNPQCKIQQGIRHFCNSYPKVTIDTDIWNSYQIEMMLLEGKV
ELGITSSEVQKDGLNYRYLFEEKQCLYCASEHPILAISDEITTKDLLKFP
IVDRGLSHKITPFSDTKNLMHLASSTNMEATAHLILSGTFVGYLPDHYAS
IWEQRGEMVKVNATSLEYLAAFHLTTLDSKDLSLAATELMHAISSVHINK
SAPITASI
>PBPRB0212 CV2853, putative ATP-dependent RNA helicase DbpA
MSQTAFSTLNLHADLLKNLTSLGYESMTPIQALSLPHILAGEDVIAQGKT
GSGKTAAFGLGLLEKLNVKRFRVQSLVLCPTRELADQVAKEIRKLARTIH
NIKVLTLCGGMPFGPQIGSLEHGAHIIVGTPGRIEEHVRKGTLNLDDLEI
LILDEADRMLEMGFQDSLDEIIDAAPQRRQTLLFSATYPPQIKSVADRIM
HKPVMAKVESTHDESTIQQHFYKVDGNEQRLTALRLLLLKHRPESTVVFC
NTKREAQEVSDDLVDYGFSSIALHGDLEQRERDQALVLFANKSTSVLVAT
DVAARGLDIDSLDAVINYHLARDTEVHVHRIGRTGRAGSKGIACSLISDK
EHYKVAMLEDYLDRAISGEPLPSMDLLDQPTFRPAMTTLQIDGGKRQKIR
PGDILGALTGESGIAGAQVGKIQIFDNFAYVAVKSESVRAAMKKLEDGKL
KGRSFRVRQIRG
>PBPRB0072 MLL3827, putative transcriptional regulator
MNSMEWDSIRIFLAVAEQGSMSAAAQVVGMSQPTVSRQILALEERTGLHL
FERSTSGLKLTPVGCQLLESAKDTALGAERFSRQVNGSSIEESGNVRLAV
SELFGFHFLPEALAAFHRVHPLINVELIVSNDKVNLNKRDADISICQQKP
EQPDLVVTYLMSRTLGFFAHKAYIDDVGYPETPDDIYRAPHSVIGFDNSN
MYINQAEKSGRNLTKKQFTFRTDSYQMQLNLIQAQAGVAVTITELAKKTA
GLIEIFKDIPLPNITWWLVCHRDVQVNPRIHHLMVFLREWFQKQDEK
>PBPRB0027 MTV005.1, conserved hypothetical protein
MSLPNVILTVLSNREATGYDITKEFSRSIGYFWKASHQQVYRELNKMADN
NLATSRLEPQNGKPDRKVYAITELGRQALFEWFQEPARNPKIRDEFLAKL
LVCGVHNSEPLQEQLEALIQESHSLMNNYDELEKIHFANYKEMDRQSRLD
RLTLRRGMHNRQAWINWAEEVLIELKAIESSKSSCAGEVRLCG
>PBPRB0077 PP3439, hypothetical transcriptional regulator
MKPDDTVFLIQCETLPFVEIRKASKSAACYQAHSHDEFSLGVIDRGSANY
KNLNKRNRIEATNTVTINPGDIHCCNPDADDWSYRMLFIDTHWIGTLQSE
MFNNYNIDYLPFSNRYEIDPNLYREFNVLFDTLMNEPNPLLSESIFIQYL
ARYFGQNKIAFPKTEKQASPDIKRVHEKLLDQLESNHTLSDLAKEAGLSR
YHLIRQFNTIYGMPPHALQLDERIKQAKVLLKAGNTLTDASGQLGFADQA
HFQRHFKKRTAITPKQYQSFFV
>PBPRB0173 R01158, hypothetical acetyltransferase
MRLNMADNNGINSRFVKNPFNNKTFIIRTMAADEVALAVNWAGQEGWNPG
LNDASTFYHADPSGFFVGELDDQIIAVGSAVIYDDQFAFCGLYIVAPEYR
GKGYGLALTKHRLAHCGDRNIGIDGVLENVKIYQRIGYVPFYENRRYQFT
ASAKLFNPIYIKPITNDDLQQIFVYDRQCFPAPRDNFLTHWITQPQAKSL
FYTADGKIKGYVVRRRCLEGYKIGPLFADNAEIAQQLLNAVQVDIEGQTV
LLDVPEINAEAVKIAEQEKMSVVFATARMYQKGLPNIDNNKIFGITTFEL
G
>PBPRB0256 RB5308, putative melibiose operon regulatory protein
MLKRVCLDGWSQMLTSRTDKTIQNGLSKHSQFYVSQMLEYIATHHDTPLT
VKQIADHVGLHANYAMGIFQRMMQLTIKQYITAMRMNHARALLSDTERTI
LDISLTVGFNSSSRFYQTFQSYLGITPTQYRKLSRDDHRWALQGSSPIHQ
LEKGACDGKRPVAITKAK
>PBPRB0222 RS01682, hypothetical transcription regulator protein
MTKDMATFNKLHYFNCVVETGSISKASKVFDVQPSSISRQLASLESELGI
RLLERTTRNVGLTEAGKTYYDYSKRIISELEEAKRAVGDLQLSPIGNLKI
STTVGFGESRILPLLPKFRQAYPDIRIEVELTERIVDLIEENVDIAIRSG
RLPDSSLIARKLVDNHFLLCSSPEYMDENGLPDSPEQLINHDCVVYGYHG
WKDWYLVKNNFQKLAIKHYMTVDSVNGQKQLILHGGGIALIPYWAVKDEL
DSGRLIQVLSEHQFSPCLHLSSTYAIYQNRNLVSSKMRVFLDFLRENMK
>PBPRB0080 RSC0132, hypothetical bacterial regulatory helix-turn-helix protein
MQIDESYQRRINKVCDYIYAHLDDELTVEDLSKVAHFSKYHFHRQFTHYM
GIGVFKFIQQLRLKRASYQLFFHRDTRIIDIALDANFEYPESFSRAFKKV
FAQSPSEFRHQSNWLQWHQKYHYREIKLEKNMNVEIKHFQQVDVLLFGIM
ALIMA
>PBPRB0089 RTH1, putative prophage MuSo1, transcriptional regulator, Cro/CI family
MKKHVEVEKSTPGAFNKDGIAHFSVRLKELIGNGPKLTESTSHTIEHLQP
INHINKNLKWDNLISVCAYSNDDAQQEDGANDAINEEFVLVPGYHIQVSA
GHGTSAIYAPVKRYLAFRRKYIQYRKLDPNKLAVIFAKGDPMIKDNDSLL
IDLNANKPLDGKIFVVRLGDELYAKRVQKSFDGSLRLISDNKEYSPIEVS
TDQLDQLCIIGRVVQRSTDL
>PBPRB0025 S1065, hypothetical DNA-binding response regulatorTorR
MTYKILIVEDDPIIRMKIKGHFAQAGHTVFEADNGVGMKEILNREKIDLI
LLDINLPGEDGIQLTRDVRNTSDIAIIMVTGRTDPIDRILGLEMGADDYV
TKPVEPRELLVRAKNLLWRIQLTRDALEQAEAAWSQLEKDDSTFRFLDFE
FDVAQRQLSKCQDMVKLTKAEYELLVAFITHPNRVLGRDRLLNLISHRVD
TPSDRTVDVLIRRLRNKMEESIKNPKIFITIHG
>PBPRB0216 S1288, hypothetical Glycerol metabolism operon regulatory protein
MQPNQALTKEIWNAFVSQSSAEAELPNIEPHLQQVWARCRRQQRHDHWSM
PHRAKGVTYASIQKSKASFLNIAIPAIEDIYEYLESESCAFVISDEAGCT
LYLCADSAMKVKLDALGIQEGVYWREGIMGNNAISSAMHLAKATQTAGFE
HFKEALHGFAVYAAPVFGDTGTALGCVALVLPVEKASVSALGLIHSASRD
IASQMQAESMLTESNQHLSEVHVLLEGVEEGVLAWYPNGKIHYLNQKGCD
LLGLTVSELGREISSILTMPQRVHQAIKQGVGLDMVDTTIESKGRLISLV
MSLKIVKNAQNTTHCYIALLYPIKHIRDLVHQHVGNRARLTFDDIVGGSD
AMLRVVRQARHAAKGRGPVLLHGEDGIGKSHLAQAIHNGSDRHGQPFIAI
NCQAIPKELMASEFLGSALESDHTSVSKFELANGGTLFLDQVECLSSEVQ
AALLHLLKTGLINRMNGNIVSVDVRIVATSNVDLDQYVVEKHFRRQLLLE
LQTFDIHVSPLRDRIEDVPILVERKLTHLEAEKKTSLTLSQEALSFLMRY
RWPGNHRELRNVIERSANFSDGSVIRVKDLPDIILTATEHGQVGDKALHS
NSLIDSEKMTIIRSALDCRGKVGNMCEDLKVSRTTLWRKLKNHDIDVNDY
K
>PBPRB0257 S3625, hypothetical melibiose operon regulatory protein
MKQHDKDALLVTPQENYSQESVSVSPLSLYSSHEKIDVELRPPHDMPGYH
WHGQVEVNIPFGGDVEYIINGSPVVLKDGHIGLFWASVPHRLTHPGDSQN
MGIINIPIHHFLSWPLNRELVNQITHGGSITIDSAIFGV
>PBPRB0199 SF0747, putative ATP-dependent RNA helicase
MIDITNLTGHKYAKIARYYLSSEPFILMTTATTPANFTELGLISPLLARL
TELEYQQPTPIQAQVIPSVLAGRDLIAGANTGSGKTAAFALPMLQHLFLQ
QHLSSKSSKGNYVTRLILVPTRELAKQVADSIKSYAVHFNGAIKTVAVFG
GVSANTQMLALRGGTDILVATPGRLLDLISSNAIKLDRVKTLVLDEADRM
LSLGFTDELSALLGLLPKNKQTLLFSATFPEQVQTLTQELLNDPVEIQLQ
SADASTLVQRVFTVNKGEKTALLAHLIKQNEWRQALIFVNAKNSCEHLAD
KLSKRGITAEVFHGDKGQGARTRVLDAFKAGEIEVLIATDIAARGLDIEK
LPVVINFDLPRSPSDYMHRIGRSGRAGEVGLALSLIDHDDYHHFKVIEKK
NKIRLEREQVEGFEADEVNEAFLIANKPMAKPEGSGKKKRKNKASLNEDI
WLDNF
>PBPRB0140 SF2730, putative DeoR-family regulatory protein
MKSAVERRMEIVSLVNRDGKARVEDLAAQFNVSSVTIRSDLSFLEKNGYV
VRSHGAAIPNSGVIAELTVHEKRRQNAGIKSLIGQAAAKLIESGDTVILD
SGTTTREIASSLKALDDVVVMTNGLDVAMELASAPGIEVLMSGGVLRKGA
LSFSGSQAESSLKNYRFDKVFLGVDGFDLRAGITTHSEQEASLNRLMCEI
SEQVIAVVDSTKFGKRSCHMIREFGNIDILVTDSDIPEDYLQGLREMKVD
VIIVEKGN
>PBPRB0268 SF4346, hypothetical transcriptional regulator
MTEAQRHSAILELLQQKRYITVNSLIEAYNISPATARRDINKLNDSRKLR
KVRNGAEAITQEKTAWSPFNIHHVSNHDEKVRIAQAAASLIAPGESVVIN
CGSTAFLLGQELCGQDVQVITNYFPLANYLIEEEHDGVVIIGGQYNKTQS
ITLAPQDEVSSLYAGHWMFTSGKGLTADGLYKMDMLTAMAEQKMLDHVGK
LVVLTDSSKVGQRAGMLFCHATKIHTLITGNDANPDVIAQLRDMGINVIL
V
>PBPRB0262 SMC02366, hypothetical DNA-binding response regulator
MKILVIEDDLTTREFIAKGLREHGFVVDEAGDGHQGLMMATSCEYQLIIL
DRMLPILDGIKVLAAIRATENQTPILILSAMDSVEDRVTGLTAGSDDYLT
KPFALAELIARAQILVKRHHSSTKVVTEYIYDDLRLDMKSHRVWRGERLL
NLQQKEFLLLQYLMEHAENVVSRMSLFESVWSYHFDPKTNVIDVHIANLR
KKLEENGELGLIHTIRGAGYVLRRS
>PBPRB0272 STY4737, putative DEOR-type transcriptional regulator
MTESQRHNALLNILNHRRAITVEKVINTFGVSPATARRDINKLEEQGKLT
KVRNGAEAKPQARMFWSPMNIHQTSNHDEKTRIAHYAAQLCHSGDSVLIN
CGSTAFLLGQEICGSDVLVITNYFPLIRYLITKEHDDVVIIGGEYHRTRG
LMLAPHQKVGHGYAAHYMFTSGKGLTADGLYKMDMLAAMSEQKMMKQATK
LVVLVDSSKVGQRVGMLFASTAQIDIVITGRDAPHAVVGALEAQGIEVVL
V
>PBPRB0197 VV2121, hypothetical protein
MSGIIGVSLCTLRNALKMLETEGWIKIEHGKGSLVLPFMSYATLITATSR
IAHMKSDELSKKIYQDASDIKQRLEQKIDHCNLVHQLFLNDLKKITSANN
MGT
>PBPRB0036 VVA1052, putative Cold shock-like protein
MNLNIKGHYMSNTTTGLVKWFNEDKGFGFITQDNGGADVFVHFRAIASEG
FKTLAEGQKVSFEVEQGQKGPQAANVVAL
>PBPRB0292 Y2012, hypothetical protein
MSLSALKKNALQNPEVKKAYDDLGAEFELISSLITMREESGLTQDEVAER
MGTKAPNISRLESGRSNPSLKTLVSYAQACGFKLDLGFKHA
>PBPRB0055 YJFJ, conserved hypothetical protein
MSVWKKLFTAIKGGANDAAESVADGQALRILDQEIREAKQELRRSDEALV
SIVAKRKMSQQKVEAFNNGITEYEGHARGAMEKGQQELALECAHKVAALR
NEQQAEQTYLDQFIKSEQSMRTNITQAKDKLRQLEQQVDIVKANEAVQKA
QSAVSATNVGANAKMHTAVESLERIKQRQTEKSAQLEAAAEMAEEQSGSS
LDKKLAEAGITAGGKSSAEDELARILGK