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# Saccharophagus degradans 2-40, 2-40

>Sde_3703 response regulator receiver domain protein (CheY-like)
MQKRILLIEDHQDINALIAMNLEVLDYHVTRCSDGAEGLHLGTTQTFDLI
ILDIMLPSMDGLQVCQHLRAKNIFTPILMLTAKKSESDRVVGLETGADDY
LTKPFSVRELQARVKAHLRRTDMSQKESTPQADDALHFGELCIDKTKRRL
TIGDKEITLTAKEFDLLLYMASHPGQVFSREKLLDAVWGYQHSGYEHTVN
SHINRLRTKLETDTSNPKYVLTVWGVGYKFYD
>Sde_1391 AraC-type DNA-binding domain-containing proteins-like
MGDRIFNVYDVFLIIAVFEALLLAVFRMVLPASNRSGKWGSYFLAAFLIV
VSVDFITGLLMWNDAIPLSQSFYSNGLVLLFTFSHFARGPLFYFYVRALL
FSGLQLRARHCIHALPALLAVVGVCVFGITTEDLQSRSGDVDTTQMASVI
WYASNGLSIFYAAYALVWLQKYLQRLKEQFSSISSIEISWLMVLSGCFLI
SWSWSILINLSADLIGGGFADAMGTSHNLIRFMLMNGLVFYSLVCTSKIV
NVRYSEPKQIAVKDSKDVVEQIERGIHELQLHLYPSINIDQYAEKIGVNA
KAVSNALNRDLKTRFFEFINAHRVEEAKRLLEDSSKKNLSIAQIYTAAGF
NNKSSFHRFFSRLVGMSPSEYRQQAQRGK
>Sde_0686 Ribosomal protein S21
MATIKDVARVAGVSTATVSRVVHNGGQVGDACRARVKKVIAELGYRPNTN
ARALVSKKSDTLGVVTPRLSMTFFGTLAAGVENAARENSYKLLMSNSLYE
TETELEAIESLREHSCNAIILHSEYSDEKTLQELARQVPGLVLINRFLPS
MANRCVWLDNVAGGKKITEYLIERGHKQFAVVTSVYQNNDPQSRLTGVKE
ALKNAGLKMPANNIVESTANMRGGEEAVQELLKRGAKFTAVVAYNDLMAV
GAMNALQDAGIRVPEDVSVVGFDDLYITRACRPKLTTMSYPIEEMANYAA
KLAIDLSTNPSNVQNRTHLFMPELIERNSVADIS
>Sde_1189 L-2,4-diaminobutyric acid acetyltransferase
MDSINAALDTSGSAKKLTIRKPSSLDGMALNQLVSECPPLDPNSAYCNLL
QCHHFNETAAAAFEGEKMVGFISGYILPAAPNTLFVWQIAVHSSARGCGL
AGRMLEAILEREALAGVSFIQTTISPGNEASQAVFRKLANKRDTHIRSEM
LFGKDTHFNGAHDDELLFTVGPF
>Sde_3949 Chitinase II
MTKRNTQQRRRLILDTLAAQGEVSVEELASALATSEVTIRKDLAALEDNG
LLLRRYGGAVSVPQELLQEPVASKISANKLALAHAAAALIRDHNRIIIDS
GRTTAALLPELSNKNGLVVMTNSLSIANALRELENEPTLLMTGGTWDPHS
EAFQGQLAEQVLRAYDFDQLFIGADGIDLDRGTTTFNELYSLSRVMAEVA
REVVVMAESEKFGRKIHNLELPWEMVDVLVTDAALTAEAKATIESHGVRV
VCAGT
>Sde_0179 AraC-type DNA-binding domain-containing proteins-like
MLNFYKSTALSFFALVLLTAAWVWLCNSKMELVHELLPADSSTIPWHFHA
LTDIEKGGSSSIQINDSEQTINYTYVLTDKITYPHATVFIAFDLLNNAAH
YVDLRRYSKAAYKLKCNPENILSLHLHTFDPKVTQVSNLSSFRISESFGH
CGEQWTEIEVDLHHLNVPAWWLNQFALNNSEQSYQLEQVLAFSIGASKQG
PINTPAQVSVHRLTLYGQDTRWFWLALFVTVILWFSAITVMLRAYTKALT
KDVRKRMKQSLPLLAFKDISIEPLKENSQLTILLRFIATAYNIPEISLEY
TSAKTGIDRNTINRLMRAELGLTFNAYVTKLRMVEAARILQCEGDIQVTE
LVYKLGFKSVAHFYKLFKDEYGCSPNKFKTIQTEALTR
>Sde_1412 rrf2 family protein
MRLTTKGRYAVTAMLDLALHAQSGPVSLADISRRQQISLSYLEQLFAKLR
QSTLVTSVRGPGGGYKLNRSAADVHVAQIIDAVNESVDATNCGGQGNCQQ
GEVCLTHYLWSDLSDQIHTFLSGISLADLLARQDVKSVANRQNMREKAGL
DAKPDDVITTANID
>Sde_2407 sigma-24 (FecI-like)
MTISDQTLIARVQANGDQHAFSQLVRKHQSQVRSWARRLCNGDEHLADDL
AQEAFIKAYMALAAFRGDAKFSVWLYRIVFNVAASKWRKKKLDWCNIDEQ
PDIAAEACELHQFAASEDITRAMQVLTEPQRIAVQLCFEEGFSHDEAAQV
MGVPLGTLKTHVNRAKAKLKVSLASWEQG
>Sde_3674 putative transcriptional regulator, TetR family
MNTNNKKPRRQQILEALASMLEASPGARITTAALAKEVGVSEAALYRHFP
SKSKMFEGLIEFIEETIFTRVSIITAEPIDALERCQKILHLLLAFSERNP
GITRILTGDALAGETERLRTRVSQLFDRLETQLKQILRDAEIRDGMHFGL
SVAATVNLMLVSAEGKIAQFVRSDFKKLPTESWQEQWPYLVRGFVVETA
>Sde_2251 sigma-24 (FecI-like)
MTAQTAQDSDHQLVLRVQKGDKRAFDMLVIKYQHKILSIISRYIKDNAEI
HDVAQEAFIKAYRAIGNFRGDSAFYTWIYRIAINTAKNYLVSRGRRPPSS
DVDVEDAEFYSGSDSLKDVDTPENHAMRDQLETVVNNAIKALPEDLRTAV
TLREMEGLSYEEIAEVMSCPVGTVRSRIFRAREAIDKEIAPLL
>Sde_3745 putative transcriptional regulator
MIPKISLEQWAAFKAVVDEGSFAKAAEALNKSQSAVSYAIAKLEEQLPTP
VLTQQGRKAVLTEAGKQLYRHATDLLAQAATIENTAKYLASGWESEVTIA
VDALFSMGAVFCALQHFSVSSPQTRLRILETTLSGTEEALLGRKADLVLT
GTIPPGFSGTRLGEVSMIPVVGQQHPLVQLMQQSGPITEQELGRHRQIVL
RDTGTKREQSSGWLRAEQRWTVTHAATSIEAVKNGLGFAFLPKEKILQEL
EAGSLIEVALAEKMERFISLYLIKTERQNAGPATQAIAQQLVERYGKPQP
KCVT
>Sde_0905 transcriptional regulator; GntR
MTLADVAETAGVSAITVSRVINQPDKVSASMRDKVQKAIDKLGYIPNRSA
SALASARSGVLGVVIPSLSNAVFNDVLRGIYDVAGPAGYQVLLVDTHYSP
MEEERMVRTLLSQAPEAMIITGGDQTQHTRKMLVKSGVPIVQVMETVESP
IDMNVGFSHRQAGYDLVTRLLANGFDRIGFLGARMDPRAQQRMLGYKQAM
DTAGRNYDGLIVTTPKPSSIAMGGELLRSVMSSSNGVCDALFACNDDLAL
GALFECQRMNISVPGDMAICGFNDIETAALVNPSLSSVHVPRYEMGVTAT
EMVLKVLAGNEVENKKIDIGYTIQMRQSTSTDIHW
>Sde_3586 Helix-turn-helix, AraC type
MLEDCKSAQERWGGVSEIIDRWLQERQQMLVLYCNLSEICDLPDHPERAA
QVKTLCEIVVDYVSAGHFEIYNQLLQEGEEFEDQEGLKQAGELFKIIDSS
TEVALDFNDKYLETDDLETINQDLSHLGESLVSRFEAEDKMIEVLHVSHK
DQVA
>Sde_3441 putative acetyltransferase
MKTRVATAQDAQSIAELHIASWQQNYTNALSANYLNNIAPAERKALWTQR
FAQPQANQQVFVAENNGELIGFACVYHNHNPKWGAYLDNLHVASQCQGLG
VGKQLLQTVASWCLTQNNSANAGLCLLVNRNNTNAQAFYLHLGARNAEQS
VWHAPDGSDVPTFWFVWDSMEPLLK
>Sde_2745 putative transcriptional regulator
MSISTLKIIRREAVLNRFGRSKTWLADQVTSGLVPPPISLGGRAVGWLDH
EINAVIAARSVNKPDEEVKDLVLALIEQRSFTANQSLEAFDS
>Sde_2179 Flagellar basal-body rod protein FlgC
MDVEQHALKVLIAEDSAPDRLILATIVSNAGHIAIPVTDGVEAVTAFKAE
RPDIILMDVLMPNMGGVEAAKKIREIARDELVPILFLTSLSDTDSLVECL
EAGGDDFVSKPYNRVVLQSKIKAFGRMREMHTTVAKQRDEIERHHNHLIQ
EQRVAKQVFDKIAHSGCLDLSNIRYSMSPLAVFNGDVLVAEVSPSGNMII
LLGDFTGHGLPAAVGSIPLATTFYGMVRKGFALPDILREINHKLHEILPV
GFFCCATCIELNFAEQTMFTWTGGLPPSYLYRYKTDSYDIINSSNLPLGV
LASSTFKAEPTRIELDIGDRLYMWSDGVFESRNAEGDMFGEDRLHDLMQE
LRGKNTLFDTILGRVHQHIGANDKDDDISLVEIIIQNIEVVPENTDAILS
QSGMQDWSMDLTLSESSLKEFDPLPLLINIVTQVPGLQKNSTFLYTMLAE
LYANALEHGVLALKSADKHDPRGFTQFYQERKERLAALEHGSVKFEFKHE
ASEDGGLLIVVVKDSGEGFDVEAREQRKREEAKTRDSKTVYHGRGLTLLS
SISEKLIIHPPGNHIEVHFRWKATV
>Sde_3941 putative transcriptional regulator, MerR family
MKIGEVTAELGISVDTLRYYEKINLLTNIKRGAAGQREYTAADMARVRFI
KRAQKMGFSLDDIASLLAFRDAPAQSKPMVRNMVAEKVTEINHQLQELSA
LRDELTALTAACEITEDNCPILDNFNKK
>Sde_3805 response regulator receiver domain protein (CheY-like)
MAKQAMAPNDCSSVTLLFVDDELPILKAFKRLVRGKNWTVYCAESAQQGI
QILSQNNVDIVVSDMRMPNMNGAQFLSYVRDNHPQAQRILITGYSDLQSL
QSAINEAKISNYISKPWEDEALLDVLQKTVDIQEGEKERRRLELVKKSQN
KKLGRLALSLNSQVNEKSMEVNQALTLLEMERNHAQMRVHELTHAVLKLL
GLSGKGRSYGAFIAESATAVGRAIGLSALELENLYIAAALHNIGYLVLGE
REMIEDANEQENEHSEQYKAQVAISEEILNGMPALAPVASIIATHKERLN
GTGFPNKLKAEQIPMPARILGVVSDYVQLHRGRMCSGVEGHAMARKYIES
RIAWHYDIAVVKHFFEQVDDAALNYISTILASEVHELQPGMILANDIRTH
NKVLLLPAGVKLNQNQINKIELYERFAKTKLIVNIVNTS
>Sde_0925 DNA-directed RNA polymerase
MKDLLNLLKNQGPSDEFDGIRIGLASPDMIRSWSYGEVKKPETINYRTFK
PEREGLFCAKVFGPVKDYECLCGKYKRMKHRGIICEKCGVEVTLAKVRRD
RMAHIELASPVAHIWFLKSLPSRIGLLLDMTLRSIERVLYFESYVVTDPG
MTTLEKGQLLTDEQYFEAMEEFGDEFEAKMGAEAIQQLMKDIELEREAQE
IREQIPNTNSETKIKKLSKRLKLLEAFIQSGNKPEWMVLEALPVLPPDLR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS
GRSVIVTGPTLRLHQCGLPKKMALELFKPFIFSKLELRGLATTIKAAKKM
VEREEPVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPASGEPII
VPSQDVVLGLYWMTRERVNDKGEGMIFSDIKEVSRAFYSKQVGLQARIKV
RIDETIMEESGESESSYRMVDTTVGRMLLWEIVPKGIPFEMINKPMVKKA
ISAVINFCYRIVGLKATVIFADQLMYMGYDFSTKSGSSIGVNDFEIPEAK
AGMIERADAEVKEIEAQYASGLVAQGEKYNKVIDIWSRANDLVAKSMMEG
ISKETVKNKQGEDEEQASFNSVFMYADSGARGSPAQIRQLAGMRGLMARP
DGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVAQDVVITEQDCGTDEGLSMTPVIEGGDVIESLGDRILGRVVARDVIR
PNSDEILVPAGTMIDEKWVERIESMGIDEVTVRSAISCDAVFGICAQCYG
RDLARGHRANVGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRASAADSV
EVKQEGTVRLHNIKVVARESGELIAVSRSGELALADAAGRERERYKIPYG
AVITVKEGEQVKGGSIIAKWDPHTHPIVTEVAGRVVLAGMEDGLSIRKQT
DELTGLTTIEILDPSERPSAGKDLKPAVTLVDENGNELKLANSEQPAHYM
LPGKSIFSLKNGDTVGVGDIIARIPQEGSKTRDITGGLPRVADLFEARKP
KEPSILAEISGTVSFGKETKGKRRLVITPPNGAVLEDGSTHYEVLIPKHR
HLTVFEGETVAKGEVVSDGPSNPHDILRLKGVEALANYITNEIQDVYRLQ
GVKINDKHVEVIVRQMLRKVEITGMGDSSFVKGEQVEYIAVLQENEKLRA
EGRQPARFERQLLGITKASLATESFISAASFQETTRVLTEASVTGKIDNL
RGLKENVVVGRLIPAGTGLAYHAERRRKREDQAGSKAGSDTVSAAEIEAA
LTEALKSSAS
>Sde_2299 putative transcriptional regulator, AsnC family
MTTELDKYDRMILDILQKDGRLSNQELADRINLSPSPCLRRVRHLEELGL
IAGYRAHLNARKLGLTLIAFIQVGMDKHTPERFENFERKIALHPEVLECH
LIAGQSADYLMKVIVKDMDAYQHFLLHTLTTIEGVSGVHSSFVLKTPVNT
GVLPIG
>Sde_0620 ATP-dependent RNA helicase RhlB
MHKNNLSFEELNLSPLVMRALSDLKFTECSAIQAKSLPFTLRGHDVLGKA
QTGTGKTAAFLIALIEDLLGTPIEEERYAGEARSLVIAPTRELAMQIAKD
AENLVKHTDLKVHILVGGVDYAKQLQKLQAEHIDILVATPGRLLDFCEKR
AVYLDQVEVLVIDEADRMLDMGFIPQVKRIVRMTPPSTHRQTLLFSATFS
EDVLRLSEQWMHEPVTVSIEDENVAADRVKQVVYLVSSEEKFTVLGNLMR
EPDVENIMIFANRRDQCRDLHHKLQRRGFRVGLLSGEIAQNKRIRTLEDF
RTGKLTALVATDVAGRGIHIDGISHVVNYTLPEEPEDYVHRIGRTGRAGK
EGVSVSLACEDDALRLEPIQELLGRKIPCEQPPEELLKPLAR
>Sde_2040 hypothetical protein
MPRDDYLSGISAEALNLHAIFAQNIKEARKARGWSQIEAAERCLLSRGAY
RAVENGELGTAIGVYWLVLDTFGLIDGVAELAAPHKDEIGRRNREVRAKR
>Sde_1550 Integration host factor, alpha subunit
MDEWLKFLFICSLCLGAWTSVNLWVNHAGPKKVRQFTGVFVLVLLVPPLV
GYLQLISAEIPAFFSFVRSTLTWWYGPLMYFIAREMLLLPNTPRGIANHM
CAVCGLFVVTQLLISSAIPYGYFVIVTAVVAAYCTLAGHTLVKNASRLRR
LNSSYRKSTFYWLQYLLAGLLLLCAMDIGVLVALHSNVHLDFLALNSIAC
VFAIYVNGIVLFTLIKPALFELDDAQTIEHVQTNTGEQHKISEVAADESP
AAKNNVRYLELSDQVATTLINTLATIMETDKPHLEPDENLTSMAGRLGIT
THMFSELLNVHLHTNFYDWMNSYRFNAALLLLQDQTVNYSVTDIAFQAGF
NNRNSFYRVFKSNLGITPAQYRKQYKAELQKQA
>Sde_3179 response regulator receiver domain protein (CheY-like)
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLQHEIQEALDSNPMLEAS
EDDFDGGDVEASSDDNAEAKTASTTEEKPAAEKVEDSYETTDNSGELEWN
DDIPKDLAVDTNWDDIYQTSGPATGLARNDEDDPDYESRRGNSESLQDHL
SWQLNLTPMSDRDKEIAEAIIDAVEPSGMLCQTAEEIFSGLAAHDEELEL
DEVLAVLHRVQQFDPPGVASQNVRECLLIQLNQFELDQTSPELKLAKNIV
DQYLDVLAARDFKQLMRKLKVKEQDLQAAIAVIQGLNPRPGESIGSDSTE
YVIPDVFVSKENDRWTVRLNPEIAPKLRINSGYASLVKRADTSADNTFLR
DNLQEARWFLKSLQSRNETLLKVATCIVEKQQGFLDQGPEAMRPMVLHDV
AETVEMHESTISRVTTQKYMHTPQGIFELKYFFSSHVATDSGGECSSTAI
RAIIKKLVAAENARKPLSDSKITDILAEQGIKVARRTIAKYRESLNIPPS
NERKRLV
>Sde_3838 response regulator receiver domain protein (CheY-like)
MIEKTILVVDDEPPIRDMLRVALEMAEYAVLEAGDAQQAHSLIVDKKPDL
ILLDWMLPGTSGIELARRLKRDEVTSEIPIIMLTAKGEEDNKVQGLEVGA
DDYITKPFSPRELVARLKAVLRRTDSMGISEPIQVEGLCLDPISHRVTIS
DMPVQMGPTEYRLLEFFLTHQERVYTRNQLLDHVWGGNVYVEERTVDVHI
RRLRKALSLEGHDRFIQTVRGAGYRFSNKVALKA
>Sde_2709 N utilization substance protein A
MKKEILLVADAVSNEKGVDKGIIFEAIELALASATKKRYDEDADIKVTID
RKDGDYVTVRRWLVVDDDTLAELGTQFTTEEAIEKDPSLKPGDVYEEVIE
NVDFGRIAAQTAKQVIVQKVREAERAQIVDEYRGRVGELIAGTVKKVTRD
NIIVDLGGNAEGLLPREELVGREVFRMNDRVRAVLADVRPEARGPQLFLS
RACPEMLIELFKIEVPEIAEEVISLNAAARDPGSRAKIAVATNDGRIDPV
GACVGMRGSRVQAVSNELGNERIDIILWDDNPAQFVINAMAPAEIESIVV
DEEAGSMDVAVAEDNLAQAIGRGGQNVRLASELTGWEINVMSVDQWNEKQ
AAEAGSARDVFINALDIDEDVADVLVDEGFTTLEEVAYVPLEEFLAIEGF
DEEIAEELRNRAKDALLTQALAGEEKNQPADDLVNMEGMDDALAQTLAAR
GVICMEDLAEQAVDELMEIDGMDEERAAALIMKAREPWFADEA
>Sde_0713 Ribulose-phosphate 3-epimerase
MHTKNDDKRKPSEQILSVLAKNVKTLRVKRKLSQEQLGELCDFHPTFISM
MERKQRNVTISTLEIVARALEVEAFQLLMEQ
>Sde_1685 putative cold-shock DNA-binding domain protein
MPTGTVKWFNNAKGFGFILPDAGGEDLFAHYSSIEMEGYRTLKAGQPVTF
EIEKGDKGLHAKNIQCTDLPETSEQQPTVEQSIAETEPG
>Sde_2409 putative transcriptional regulator
MPNHIHHTINSNINNNMLNNSSVTAPAKGLIQPALSTQHFQLYHHPPSPA
LTQWIAYFWEVRWDLANQPAYTQQNLPHPAQHLIVNPFLNSGIMGVHTRR
FEYKLHGKGQVLGCRFNFGALAHLLSVKPKLLNDVYSPVERILPLTQSAL
DERVREDNLSQAIQDIEQAVLAVAQPLSSDALLAGKLVEAIEANRAIVQV
EQLAEQFSISVRKLQRLFADYIGVSAKWTICRYRLFEVLAELDKQPQEQL
VHLANRMGYYDQAHFNRVFKTMVGVTPSEYASGIT
>Sde_3110 response regulator receiver domain protein (CheY-like)
MSGSKIILFAEHLSTLGEALAQAFDSTPISTANALQLAVSQGDYSLIVVD
MLGGGDVSIQRIRDVLPSPDELSVPAIILANPASMADKLAMYDMGYDDLI
ESDVELDEAVARCRKATFHQIAMRQLSSRLDAATATARTALVDNSDLGAN
VQFLLALHSCDNLDELGQQFFNSLERYGLKCSVQMRSLMGIKNMEPTGMA
KDLESQLLTELKDKGRYIDFGRRTIINFDRVSMLIKNMPVDDAEKYGTIK
DNTFALIQGLNARVIAIEDRYELEKEKETLRKLSSDVQNVMHVIKSSYQN
VMKNIATTVEHTAEKIQYRIPALALTEEDEVFLEEVTNNSVYETNRIFNE
GLKVDEYVNKLELSLGAALAAVETDATSLSSEGDSGAKVDNNLVELF
>Sde_2774 LysR family transcriptional regulator
MATDKFVAMKIFRRVAELKSFTLAADDLDTTPATVSKHIAFLERDLGTRL
IHRTTRRLNLSDAGLTFLKRTQELLDALEEAELEAQGYQTSPKGSIRLNV
PMSFGLTHLTEAVDSFLRRYPDIDIDLQFSDRLVDLVEQGVDLAIRVRHS
LADSSLQARALKQSRNVVCAAPSYLAQNPEIRCPDDLVHHNCLLYTLHDR
PKVWELGNQEVIVGGNFRTDSSLAIRECLIAGAGIGFIPRFLVENDLENQ
KLVPLLTDFPAKPYTVFALFPPGRKQPAKVRLLVAHLEEHLNQKSFWE
>Sde_1884 Rhodanese-like
MSVEANTVPSRYAARLLEQASAAGCDAEALLAEVGLSSSDLQSKDVIPSL
KYGELYQLVMRKTHDEWFGMFSAGKVPLGAFRIMCLTLLQCSTLRQVIIR
AGEFAEICRGMNTRYYLEENALEAAITLRPVNHISEAEFQQKLDEAKPVH
LLTAVLTWHRFAEWLVASDLPIKHVLVTYDNTHTEESLVYTEVKSILFEQ
PYNGIVYDTACLDLPVVQNEENLLNFLRTAPYHLVTEDPAHIRFADKVRN
ILKKDVSASMPSSDEVASQLHMSTTTLRRKLQNDNTSYQRLKDECRMEAA
FHLLNCADLSNNEIAQKLGFDEPSAFFRSFKKWTGQTPGEYRAR
>Sde_0578 acetyltransferase-like
MLHRKTIGVSGLPMELTIEVDDLSRPAIAELLSDHMREMWEVSNPESCHT
LALDKLRAPEVTFWSVWSGDELVGCGAIKRLNDTHLELKSMRTKPQYQGK
GVGAQLLRHIIAYAEDEGYTRISLETGSSSWFDRACNLYEKFGFTYCEPF
GDYTLDPNSLFMTRTLP
>Sde_0249 sigma-24 (FecI-like)
MSKILSFFKRPSRNNSDFEALVAPYMAALHRQAFKYAGNESEAEDLLQEV
LIEAYQRIDALQAAPMPLAWLTRCLYHRFVDAYRKQKARPALEDIDALHL
RDEPQAAGTPEAHYWHSQVLKSLTLLSPEQRMVVSLHDMEGYTLVELANI
VEMPLGTLKSHLHRARKILQQEFKLQPFQPATRYK
>Sde_1680 RNA polymerase associated protein-like
MTDFVQGQRWVVDSEPELGLGMVVGMDERTVTILFPEVDTERRYNAQQAP
LTRIQFEVGDEIQPREGEPQIVATVHEQNGVLVYETQNGQLVVETMLAGS
IRLNQPYMRLITGQLDKPNWFHFRRKFDNAMTKAWCSGLKGYLGVRANLI
PHQLYVATSACNRERVRVLLADEVGLGKTLEAGLILSRLLKLERVSRALI
IVPDTLQVQWLVELVRKFSLYPSLYDGEGYDFGNAGVHIVPHSVLITEQE
NLLSHDFDIAIVDEAHHISMESEGFAVLKMLSTLLNHLILLTATPEQLGA
ESHFARLQLLDAAKFTDFDSFISQENTYAELSKRIQDLPAGKDQLVADLG
LEPGDDEFVIKQLLDQHGVGRVMFRNARKAVAGFPARICLPHQLEEDGWD
SKFEWLAQWLKANPKQKALVICHTADTVKECELYLWEKHGIDVAVFYEEQ
TLIERDKSAAYFADEERGARILLCSEIGSEGRNFQFSSHLICLDLPDHPE
LLEQRIGRLDRIGQKNDVSVHVPCHPESDTAKQLFWYNDILNCVEQQNPA
STAIHDKYWQQDSLSWGSADLAEIREELAQLQLKIVEGRDALLELNSCRQ
PFADQLAQSIADFEQATPEELVSEASELLQFHYEQTFDGIFSLIPSDKML
IPALPGLPAEGVELTYDRDIANSREDLHFLTWDSPFIEGLWELLHHSELG
SASVAMLPSRQLPAGHCLLEVCFDFMIQSPAAKECLPFIQESSVRSLVLD
VGENDLSGILPESALEANLQGVKKHLAREVIKSRKEAIPQWFKKAEDISV
AKKSAVQAAATERAQSFFEGEIKRLKTLKAKNPLIDDAEIALLEVKSQAV
QHAINHAAHLQLSAIRLIVITPAE
>Sde_0804 transcriptional regulator, GntR family
MPVFERNFNLSHRMTHELGKSIVCGEFGPNDSLPTEAELCERFGVSRTAV
REAVKMLSAKGLISSKPRQGIRVMPQEDWNIFDSDLLRWSLEGNPSMRVL
REFLQMRIAIEPEAAALGAQFARPERIKAVGDALERMRNAKADTDEALQA
DIDFHISILYTSENRFYIRMRDFIRTALSVSIRHTNVIKGNPDAVIADHA
KVYNAIESRDPVAAKSAMLALIEEALGFIEQELANSGEEM
>Sde_1188 transcriptional regulator, MarR family
MDNIQAVLVALRRLIRAADIHSKKLVKTSGLTAPQLLLLQALKEGTDMTV
GALATQINLSQATVTTIIDRLERRHLVTRVRSSVDKRKVHVYLTDDASEI
LKTAPTALQEQFVDRFLKLEVWEQNMILASLQRVGVMMDAEDIDAAPVLD
IGELDRKDESKLSSGEL
>Sde_3333 hypothetical protein
MTPIRISNLRDYPEWLTQVSQWLHSEWMARYGEGVSAQAVDIDRRARLES
LRKHLEPNALPVSFVAHQNEQPVGVVSLVRYQSEQVPNPAVWLTNLFVLP
NYRKHGIGQSLLVSAQTYAKNMERGNKVVPFNAKLQLFTHDLAAYYGERG
WKKNRVSILHGLRGDIMEFDLRSRG
>Sde_1667 CBS
MKLQQLRYIWEVAHHELNVSATAQSLYTSQPGISKQIRLLEDELGVEIFS
RSGKHLTRITPAGEAILRTAGEILRKVESIKQVAQEFSNERKGSLSIATT
HTQARYALPPVIGKFIQNYPDVSLHMNQGTPMQISEMAADGTVDFAIATE
AMELFSDLIMLPCYKWNRCILVPKGHPLTQLSMLSLEDVAKHPLVTYVFG
FTGRSRLDEAFLEHGLAPKVVFTAADADVIKTYVRLGLGIGIVAKMAYNE
QEDSDLVALDASHLFRASTTKIGFRRGTFLRGFMYEFIEAFAPHLTKEVV
NEAFNRHSKLELDELFSNIELPEY
>Sde_3429 transcriptional regulator, LysR family
MAYIISRVGTVDKLQTIKVFIEVAKLHSFSSAAEVLGMSAPAATRAVAEL
EGRLRVKLFNRTTRLVRLTESGRRFFNSAVAIIEDLEEAEAAAAGLYATP
AGTLTVTAPVVFGQKHVIPIVNEYLGLYSGVSVNAMFYDRITSLLEEELD
VAIRIGHLKDSNLYATQVGSVRRIVCGSPRYFKKRGVPKCPEDLHEHDLI
FPKTYEGTTTWQFRNGDKTERLKLNPRLTCNQNGAALRAAVEGHGITRLM
SYQVGEELEKGNLESILTGYEEAPLPVNVVHLEGRRANAKVRSFIDLAVE
RLRENPFISGNI
>Sde_1950 putative transcriptional regulator, MerR family
MRRVQKPRPEMSQARQSGYYNISEASELSGVSAKMIRHYEQIGLMPEADR
TDANYRIFSQSDIHTLQFIKRARSLGFSMKKIATLLNLYQDKGRPSSEVK
RLAEEHIQSLNEAIKEMQEMRDTLSNLAKHCRGDERPDCPILEGISCSH
>Sde_1789 putative transcriptional regulator, TetR family
MAQNETVDRILNAATILFAERGFAETSLRTITGMADVNLASVNYHFGSKK
ELIQAVFTRFMTPFCKELDRRLDDYEHAGQQSPNPDVLLRHLFAAFKAVT
EEINEPPQRFMKLLGLAYSQSQEHLRLSIIEQFGGTYTRFTHALKGSLPE
MSNVTFYWRLYFMLGAAVFTLSSYDSIRGILNADYHEDTALDAAIELMIP
SLVGMLNVGD
>Sde_0583 response regulator receiver domain protein (CheY-like)
MNIVLLEDDPQQAELVTQWLSADPLFNVTHYENVKSFLEGCRANVFDVAI
MDWELPDQTGLEALKHLRTRDKHDFPVIFTTQRDSEEDIVEALNSGADDY
LVKPLRKAELLARVNVARRRLGLASASTTLTLGDILVDTQARTITKQGEQ
VKVTQKDFDVTVHLLSNVGKVLSREYLLKAVWGVSADLNTRTVDMHVSRV
RRSLGINPDMGYCITTIYQHGYRLEKISNET
>Sde_0062 response regulator receiver domain protein (CheY-like)
MKDTDVIEQIYATIRQPELWSDTLSNLAKVLNSSHAFIAARHSTQEQPFA
FIEHGFSDGHFQTYQEHFYKVDVWTQALANHTPNRFHASHAVYDDKAFKQ
SEIYNDFARPADIRHSIGCLLLSAQQPVMTELAFMRGEGDQQFSAGQAEL
ASSFLKHIQQSLLIGQQLQVATQADNSLHTFLNTVTDATLICSTKFELHY
NNNAAEQLLRQSRLLHVGLDKKLRFENLSTHSQVQQLVEQLVWSERNSLD
TSLLTQAGDVRYRINIQPWFEEISTPWGKHKIPALIITVKPIATRVEISA
EIIRELFNLTIAEAEVCAALCSGLTTQEIAKQRNASIGTVRQQIKTCLSK
TQTNSQSQLVAKLITTQVI
>Sde_3817 DNA-binding protein
MPKTNIVNTIRTQRFMAGEMTQQQLAELVGVTRQTIIAIEANRYAPSLEL
AFKIAQAFNLPLEEVFLPPERE
>Sde_0554 TonB-dependent receptor
MNKAERLLQTVNLLRNRRTVLTAKQIAERLDVSERTVYRDIQSLMLTGVP
VEGEAGVGYRIQRNFELPPLMFDKSEVEALLLGARMVRSWSDKALAASAH
SALNKILAVLPPDLRELEETSAIRVPQFQGQSGAAKYSERVRLAITAKQK
LLLEYSDVNQTPSQRLIWPLGLFFWGAAWTLVAWCELRDDFRIFRLDRMQ
SCTPQKDFFSPSKTQSLDAYLENVRKQYGDCGLE
>Sde_1584 putative transcriptional regulator, MerR family
MLEPSHNDELPEIPGKRYFTIGEVSELCAVKPHVLRYWEQEFPQLKPVKR
RGNRRYYQRQDVLTIRQIRALLYDQGFTIGGARLQMTDEGGKADEQPTNE
LVQDIIKELEEVLAVLKT
>Sde_3034 ATP-dependent RNA helicase DeaD
MTESSPNFAQLGLNEHILKALTDVGYETPSPIQAKSIPELLAGRDILGQA
QTGTGKTAAFALPILNNLDLSQKAPQVLVLAPTRELAIQVAEAFQSYAHH
LPGFHILPIYGGQGYDQQIRALKRGVHVIVGTPGRVMDHMRKGTLKLDQL
KVLVLDEADEMLRMGFIDDVEWVLTQTPPTRQIALFSATMPKEIAKVANK
YLNDPALIKIEVKTQTADTIRQRYWGVSGHHKLDATTRILEAEEFDAMII
FVRTKTTTIELAEKLAARGYSSAALNGDISQNLRERTVEKLKKGQIDILV
ATDVAARGLDVDRISHVLNYDIPYDSEAYVHRIGRTGRAGRSGEAILFVA
PREMRMLRTIEKATRKPIELMKMPSTDDINQIRVDRFKQKILDAAKSPGL
EFFRKLVTEMQHDNELDTADIAAALALLYQGDQPLLLEDRPQRQQREFKE
RDGDFDKRGRGDRDGRGREGRDRGKGREKDENMETYRIEVGRKDGVKPGD
IVGAIANEANISSKFIGHIKLHDDFSTVDLPSGMPKEVFETLSKTWVCQK
QLRITRAEGNAGGGRGRGGDDFKRKKRPANKDGAPRKPRAKKADS
>Sde_0802 AraC-type DNA-binding domain-containing proteins-like
MFNTHDLVLVITIYQCLLFALFLITFKKGRRVSNNLLALFLLAHAAISLD
ILVWFGAAFHSFIEQHLPNAFFILRIGHWAEAPLLLFYVRSLVYKGPFFK
KTDYLYFIPFAIALLDYIFNWFILSPELKDNFLANYSLSTESIQSRLVYL
FREVFRTALGVMCLIEIRRYQAHIKNEYADVEDIDLKWLKLLVVGFLGLR
ISAVVVSLSLISLYEFHIPLNTELMGLTGNYVFLLLLSLLIYFSLNSTQV
FSGIEAKHEELANAPPPPTTKEIEEITLYMATQKPYLNHRLRLETFAKGT
SLSPRRVSFVINRHFGKNFFEFINSYRIQESKNLLADPSKADLTMLEVMA
KVGFNSKATFNTLFKSLVGQTPSQFRREHSK
>Sde_0101 conserved hypothetical protein
MHITRFTDYSLRVLMYAGLRDGELCTIQEIADSYNISKNHLMKVVQELNI
KGYLKAIRGKNGGLTLGRPANEINLGSLVRDTEQDFNIVECFSEADTCTI
TPNCKLKSILAQALNAFLGVLDDYTLEDLLAPRTKAPLMKLLFTDK
>Sde_0919 TonB-dependent receptor
MAKRWYVVHAYSGYEKKVAAAIKERIELNNMQDSFGDVLVPTEEVIEIRA
GQKRKSERKFFPGYVLVQMELTDDAWHLVKETPRVMGFIGGKADRPAPIT
EKEAQLILQRVDDSADKPKPKTLFEPGEMVRVTDGPFNDFNGVVEEVNYE
KSKLQVAVLIFGRSTPVELEFGQVEKV
>Sde_3500 Band 7 protein
MEQLDYAELCSALCEATDEETLKELCLKFCELVGFEFYIFGIISSASSLS
SPTISTISNYPDEWFKNYFEEGMQRHDPVVRYCMQNTSAIRWRQLMDLEH
YVDAIGEKIMIRASESGLCDGLSIPIKAPSGEIAIFSLASNREEGLNQRI
NACLPFAQSFGTQVFECYSALMLKLAQNKQTHLTAREKESLFWACEGKTT
WEISKILDVSERTVIFHLSSATSKLGAVNRQHAVAKAILSGLIKPTL
>Sde_1934 putative transcriptional regulator, MerR family
MRVKELANHLSVSAETVRFYTRQGFLSPTKNPVNGYKEYGLKDQSRLRFI
LSARALGFTVKDIAEILSVAEQKRTPCPMVRMMIEKRLLETEAQYQETVK
LRQRMREAVKTWSGLPDAEPTGDMICHLIESFSHSQEGVHHE
>Sde_0994 response regulator receiver domain protein (CheY-like)
MLTEANQAALDNNGIALCSPKSSLQTGLLAKLIADELKLDCTVYKALKDI
PSAPRVLLIDCQGQDIAALRDIAHAYHEQHSEGTAALLNAEYASEHESIL
DWPCMSGIFYVDSDQQQLIRGLQCLLDGDYWVPRRLLHHFLDKNRRAPSK
VAHPDVKLTRRERQILKLIKDGATNADISTALKVSEHTVKSHLYNVYKKI
GVRNRLEASNWVRDLSEADLI
>Sde_2642 transcriptional activator MltR
MAGQRRWHIALVYRHWQCFAPFKVADFVCTVPQSFSRFFKGATGRTFVSF
VNELRIEEACKQLASTTNDIIDIAYECGYGNLSNFNRRFSQIQKCTPCEY
RKKHLQRRA
>Sde_2639 Protein of unknown function UPF0031
MKNLFGAIEAGGTKFVCAVGSGPDDLTEVRFPTTTPQETLGKALAFFAPY
KGQLKSIGIGSFGPVDLQRNSPTYGFVTSTPKPGWADTEFAGVFARLFDL
PVGFDTDVNGAALGEQRWGAAQGLDNFIYITMGTGIGGGVVAGGKLIHGL
VHPELGHMFVPKQPDDTFAGQCPYHGDKCFEGVAAGPAIGARWGTPAHEL
PADHPAWDLQARYVATALASLVCSFSPQRIILGGGVMGQAHMLNSVREKT
VQVLNGYIQSPAILENINEYLVLPGLGDKAGILGAMVLAEQAFDNR
>Sde_1796 transcription-repair coupling protein Mfd
MTSNMPLPLPSKLGDKKTWGGVSGLARVFACAEAAAQHNGTTVIIVQSMT
EADRFARDLMLLTKGKKNTPEVLQFADWETLPYDNFSPHQDIISDRMRCL
YQLSNQAQAIVVVAASTLMQRLAPANYIIANSLVVEKNETINRDNLLTSL
INAGYQRVDTVFNHGEFAIRGALLDIFPMGSSAAYRIELFDDEVDSIRTF
DPETQRTVDQVSKIELLPGKECQLDAEGISRFKLNWYENFNVDHRECPVF
QDVSSGISPAGIEYYLPLFFEQTASLFDYLHENTLVMVTKGFETAVEDFW
RDASSRFESHNIDMRRPLLPPAKVFHSVSEIYSQLKRFQRVVLEPTQVEE
RSGSANIKTLSTPNLNIDAKAQNPLYKLEEFIYSYDGRILFCAESNGRRE
TLKEHFKKIDLQPEDVASTDAFLQGKSSIAICVADFQEGLHLKTPNICII
AESQLFGQRVQQYRRRKESNTDFNENIVKNLTELKIGAPVVHIEHGVGRY
LGLQTIEFDGQKDEFLVLEYANEAKLYVPVANLHFISRYSGAEDSSAPLN
RLGSDQWQKAKRKAAEKLRDVAAELLEIYAKRQAREGFQYTYPKDAYEIF
AESFPFEETVDQQQAIDAVRQDMISAQPMDRLVCGDVGFGKTEVAMRAAF
IAVQNSKQVAVLVPTTLLAQQHYENFKDRFADWPVNVEVISRFKSSKDIS
EIQKKLEAGKVDILIGTHKLIQGELIFPNLGLLIIDEEHRFGVRQKEALK
ALRTEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPAKRLSVKTFVRQS
DNAVIKEAILREIMRGGQLYYLHNEVSTIEKTAADLQELVPEARIRVAHG
QMRERELEAAMSDFYHKRHNILVCTTIIETGIDIPSANTIIIDRADKFGL
AQLHQLRGRVGRSHHQAYAYLLTPHKKAMTADAVKRLEAIAEAQDLGAGF
TLASHDLEIRGAGELLGDEQSGQMQAIGFSLYMEMLDKAVEALKSGKELD
FESNFNNNVEFNLRIPALIPDDYLPDVHTRVILYKRMASVKNENELNDLQ
VEMIDRFGLLPDPIKNLVRQTRLRLTAEQLGVCKVEANNTGGRIEFTTKP
NIDPLTIVKMVQTTPQHYRMEGASHLKFFFDMESADERLLTIHNIFETLM
KSS
>Sde_3697 GTP diphosphokinase
MLTIDSLSHRLSSYLEPTQINRVKRAYYYAEQAHTGQYRRSGEPYITHPL
AVANILASVHMDHQSLMAAMLHDVIEDTGIGKQAIADQFGSTVADIVDGV
SKLAKIEYETQAEKQAKNFQKMALAMAQDLRVIVVKLSDRLHNMRTLGAL
PPEKKRRIAKETLEIYAPIAHRLGMNDWRIEFEDRGFAAMHPLRASRLQA
SLSEVRGNRKALVEKIQSGIETRLQRENIDGLVIGREKHLYSIYNKMRSK
HKSFKEIMDVYAFRIIVEDIDTCYRALGAIHNLYKPKPGEFKDYIAIPKE
NGYQSLHTIVIGVRGVPIEVQIRTKEMDELSSRGVAAHWLYKSNDVNSVH
SGSYDRANRWIKRLLEIQEHTNSSVEFVENVKIDLFRDEVYVFTPKGAII
ELPAGATPVDFAFGVHTQVGNTCVACRINDRPAPLSQVLESGQKVKIITS
ENSQPNPNWLNFVVTAKARSAIRHYLKNQRHMESVELGKRMLMRALANLD
INLEELNEQQQGYLCEQTQVASMEELYESIGFGNKAAYSVAKILQPESDT
SSDTLAPITIDSADSLLISFARCCRPIPGDPIIGHMSTGKGIVVHRDSCK
NVTDLVSKKENISTINWSAQVAGEFLTEIRVEVKSERGIIATLATRIAQT
GTSIEGIQVEERDAESSVITLVIAVNNRIHLANVMRSIRTMRSVARVSRG
KN
>Sde_0807 methyltransferase
MNTADTLMTERANPFSAPAQPAEESTQLPQGQSLRDCVEKSVNNYFQHLD
GQDVSDVYEMVLAEVEAPMLEVVMKYTRHNQTKAAQVLGLNRGTLRKKLK
QYGLL
>Sde_2238 GTP diphosphokinase
MVQVRVDKPLTSSGELDVDAWIERLRDLSEIDDDGKKALALACEKVIEVE
GLPGDKLTGWGEGYTTLNAGLDMAEILAELQLDAESLTAALLYRSVRENK
ISTEVVNELFGRGVHRLIDGVRQMAAISGLTNHSGESVFGQESAEQAENV
RKMLVAMVDDVRVALIKLAERTCAIRAVKKAPLEKRQRVAHEVADIYAPL
AHRLGIGHIKWELEDLSFRYLRPYDYKYIAKLLDERRLDRQEYIENVIGI
IKTQLSAEAIEADVFGRAKHIYSIWRKMRKKNIDFSQVYDIRAIRILVNT
ERECYTVLGIVHALWRNIPLEFDDYIANPKENGYRSLHTAVHGPGSRVLE
VQIRTKAMHEEAEFGVCAHWRYKNAEKGGAEASYEGKIAWLRQVLEWHEE
VGGSPWDDHLTASVEQDRIYLFTPEGHVIDLPEGATPVDFAFRIHSDVGL
RCRGAKINGRIVPLNHPLKTADQVEILTGKRESPSRDWLNPALGYITTSR
ARARLHQWFKLQDRDQNIADGRALLDKEFKRLAVEGLDYDKLLKKLGLKH
LDDLYAAVGTADYSVDKVLNAAQRLISGDEPVNPVISLVGKASVEKGGRD
VFIDGVGNLMSQIAHCCHPIPGDRIVGYITLGRGVSIHRQDCGNIMQHQA
NEPSRIIAVDWAEAPKQLYSAVIALEAFDRHGLLRDITTLLDRERVNVSA
MQTISDKDKNTVEMTITIEISDFGALSRVFAKLSQLPNVTEVRRKH
>Sde_1320 putative transcriptional regulator, TetR family
MQSVKDPTATRLRILQVAAGEIINNGYKAASLANILANSGVSKGALYHHF
PSKLALGHAVFEELYVDRFQHFWGFPLENEAPIQALCDFFLALPSQITED
EMTQGCPVCSLAMEMSAEDECFRSQVQELFEWLCKRVQAAFVLAQQNGQL
KDGVNLEASARFIVASIQGVQMQARYMEDKAKVSETLIAVVDYLKLLMR
>Sde_0716 putative transcriptional regulator, Fis family
MSEQAKKQSRIKELINRGREQGYLTYDEVNDHLPDDISDPDQVEDIIQMI
NDMGIRVYEVAPDADELLMTDGDSSADEIAAAEAAAALAAVETEAGRTTD
PVRMYMREMGTVELLTREGEIAIAKRIEEGLRELNHAIALWPEAVQQYVN
EYDLVEKEERRLADVISGWLDPAEDVAPPVVAAETAEDTDSDDDDDDDDD
TDTEDEEESTGIDPEYARERFDELKAALLKVEKAIAKHGFESKAAGKEME
ALGEIFKYFKLPPRQFDPIYQGIRQILTRVRAEEREIMRLCTRLGGMPRK
TFMKEFPGQETDEDWIPATIGKGRDYSDSLKPYAEDIIRAQRKLKQIQEE
SGLSLGHIKEINRRMSIGEARARRAKKEMVEANLRLVISIAKKYTNRGLQ
FLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
RIPVHMIETINKLNRISRQMLQEMGREPTPEELGERMEMPEDKVRKVLKI
AKEPISMETPIGDDEDSHLGDFIEDTTIDSPVDSATIQGLTEATRSVLAG
LTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH
PSRSDHLRGFLDD
>Sde_2054 response regulator receiver domain protein (CheY-like)
MTKILVADDHDLVRMGIVRMLSDVEGIEVVGEACNGEDAVRLARELAPDV
ILMDVKMPGMGGLEATRKIHQACSGCKIIAVTALSDDLFPERLMKAGAAG
YVTKGAGFEEIVNAIRTVLNGDLYMSSSIAQQLALRNFGSSKGSASPFEQ
LSERELQTAIMIANSKKVHEIAEAFCVSPKRSIVTATAYSISSKSTVM
>Sde_3711 putative ATP-dependent RNA helicase
MEFSELGLHQSLQKALDKLTFTKPTDVQVQTIPAVLAGKDIMVSAKTGSG
KTAAFLLPMLHKFLNDPRPNTSTRALILLPTRELALQTVKAFEQFAGYTQ
IKVGLIMGGEAYKHQVATVRKNPEVLVATPGRLVEHIKNGNVDFSDLEFL
VLDESDRMLDMGFQENMLAIAAVCNEERQNLLFSATLKHKGIGGITGLLQ
DPVRIQVDSAKEGHSNITQQRVFADDDSHKEKLVVKLIAEEDAQRVIVFC
NTRLQCQKVSNILRANKLVSEYIHGEVTQSDRKQVMNRFIDGKIRVLVAT
DVAARGLDIKDVDLVINFSAAFTGDEHVHRVGRTGRSDKTGLAITLISPK
EFNPMSSIERYLKIRLIPRKVKGLEGTYNGPKKLKSSGKAAGPKKKKTKT
TAGKPGKKLPSKKDPQKKRSAPKVNLGDGSEPLFKR
>Sde_2999 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
MDTVLFNFHDLVLILTAFECLLFALLLSATNKEKVISTYFFIGFLICHIF
IPVHELTFWGKQFRIWMLDISPNLFFVGSYAYFLDGPLLYFFVRSLLYKD
FKFKQIHLLHALPVILFFIHMVVSFYLQGYDERHRLIETQHIAYSSPYLY
FDAAGRYMRVVYAVLCFVLIFNYGEQLKNVFANLNKRDLAWLKVMLTSFL
VLFSWDALLLTIKLHGLANDDFNMDLLNVFGLSGYYLTFAVLNILIFLKF
TLFTSVASVNESATPERHDEKLEGVDKAVVDHIEKTMAESKIYTMPDITV
DRLAAEMKMPAKRLSQTIKQHFHLNFYEFINSYRIEEAKRLLSDPESANK
TITEIYYEVGFNSKSVFNTFFKRVVELTPSQYREQQAKANNSDKAGFALV
RREK
>Sde_2446 response regulator receiver domain protein (CheY-like)
MRILILEDNRDIAESVGEFFELNGHHIDYAMDGLTAMHLAVTNEYDIYLF
DIGVPGTDGISLTKRLRIDGNDQTPIIFLTARETLEDKIKGFESGCDDYV
VKPFQLKELLVRVNAIYKRSQPQISNVIDIAGLRIDKNKHEVTRDNVNIT
ITPVCYKILLTLAESSPNVVSREKIESIIWKDIAPSSDSLKSHLYSLRQK
VDKPFDFPLIHTVSKQGFRLYKAS
>Sde_3413 conserved hypothetical protein
MKLLVRNLDRSTTEDEIRVLFEAFGPLQSCVIVMDKATGQSKGFGFVEMP
NPGHAKAAIKSLNGAKVGASNIRVKKADEKPAE
>Sde_3230 regulatory protein, LysR
MDKLTCMRAYCQVVKAGSFSAAARELNLSKVLVSRYVSELEADLGVRLLQ
RTTRKMSVTAEGQAYFERSLVVLQDVTELEDAIKNKTGAITGKLRLAAPT
EAFSVEHLMPLIGEFAQAHPSVEFDIEMSDRYTDIVDEGYDLAIRIGKLK
DSSLVARKLADMQVILCASPQYIASNTPISAPEDLNTHTHIVDSNFLNGA
NWPFKQQETVVNIKPQPMFLINNSPAARALLLQGLGVGVCPSFTVREQLQ
TGELVQLLPEWELSKGGIYVVYSHRKHLSAKVSGFVDALVEHFSQRIC
>Sde_2164 Flagellar protein FliS
MAVSVAENLMVYEKPKEGDQEIKVEDYAYLVKRIAHHMMARMPSCVQIED
LIQAGMLGLLEAAQKYDASKGASFETYSGIRIRGAIVDEMRRGDWAPRSV
HRNSRRVAEAIATVEARHGRDARDHEIAEEMGLSLDEYYAMARDSASTRL
FSYEETYENDESRFDEYEPSDGLRGPSEQVHRNALYTDLVAAIGKLPERE
RLVLSLYYEQEMNLKEIGLVLGVSESRVSQIHSQAALRLKSRMQDWQSYE
>Sde_2292 transcriptional regulator, ArsR family
MKQIEQLAEHAANAAKLLKELANENRLMICCCLGDQELSVSELNAQIPLS
QSALSQHLARLRSADIVATRKEGLTVFYKLNGDNALKIILTLKSIYCPE
>Sde_3858 regulatory protein, MarR
MNTLQLSIYAMALGLCAFTGLLAWRASFRNRYFLVFMTLLVLMLGCDWLM
HHPSTPLKNLWLVILMASALLVGPCALLLANSVGNADLHINWRSHAVLVI
AAWLLLTPLATSIHFGTEFVNAAAPVTKAYAFFIHTGMSLTVGLFLLQTL
WVLRTCYALLQRRNVQNKWLFSELADPGLNLLRILVLAIVINAVVSIAKV
LYCALLDGVYMPINIVISGIHLLMAIFLASSYISLVVGAQGKAEAIRQTL
FKPEAHPTTQSDTTASKNFEPSSNSNNKTTAELTGKQQALLKQIKAAMDV
EHLYKKPSLSLRDLCDHLNESPHNISQVINESDLGNFYDMVNSRRVALAS
QLLQQNPQRTVLDIAFDCGFNSKSSFNSVFKRYTGVTPSQYRA
>Sde_3011 hypothetical protein
MKILFLIMFLVFSNVVNADQTSWAKIRQMNYSATADFLFFITTGKWEVKS
GDNITCEPTYIQVTKSVLGRDKMLSIGLAAHMAGKEVMFHGECGSNINYF
EATYIVIR
>Sde_2781 putative transcriptional regulator, TetR family
MTHTESHKRNLRRKEARPDEIVDSAMKLWANQGFTATKIEDIAKGAGVAK
GTVYLYFESKEAIFEAAVKIRLAGTMTQIDETSKDESLSTRDLLKNFYWR
VYQQLFVNGSAVLMKVLIAEGHRFPSLVNAYKSVVLSNGIHSIANILRRG
VARGELNKLANTIDNRLVMAPVVMFTTWSMITGEQSKSAYTKLIDDHIYI
LMKGLG
>Sde_1948 response regulator receiver domain protein (CheY-like)
MRLLVVEDEVKTGDYLQQGLSEAGFMVTLARNGLDGHHLAMTETFDLLIL
DVMLPDVGGWRIVQSIRESGCQAPVLFLTARDSVDDRVKGLELGADDYLV
KPFAFAELLARVRTLLRRSTAPVLADQITVADLILDLPKHRALRGGRKIN
LSHKEFCLLELLARRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRS
KIDEGFEPKLIHTVRGMGYKLDVEDE
>Sde_1604 putative transcriptional regulator, XRE family
MGRKLMRLRQDRGLSQRELARRAEMTNSTLSMIEQGKVSPSVASLERILS
AIPISLEAFFSNSTAQVGVYKEQELARVDLPGSTILMLGLSETTLAGCYL
AKQVIQPGASVTINWLRRSGVIAAMVAKGEVKVTIDADVHLLREGDCLHF
NLRRSHSILNPGTMPAELICSSLPE
>Sde_2769 Phosphoribosylaminoimidazole carboxylase, ATPase subunit
MQSSLYFRTEMSAPWGVAVPAKGKVARFHIAIRGQCWLRVEGENKPLFLA
NGDLVIIPHGAAHVMGDTQETAAKPLGDVLSETQYTGEGPLVYGGGGAGC
TLVCGEFAFDERETHPLLDNLPSVLSITADQGHHAKWLDAVMGFVAHEAA
QMRPGAHAIIHRLSDIIFIQAIRLLLDSSPHNIPFLSAFADNRISMVLSR
IHAEPQHKWSVESLGQIANMSRSAFSNRFSELTQMSPLQYVMFIRLNRAS
RLLIESDYSLGQIAELIGYQSEAAFSLAFSKQFDCRPGEYRKRASTQ
>Sde_1571 transcriptional regulator, XRE family
MKVLLVEDHLLFRDGVSLILERLDPNTEITPCGTGADAFALAQQHADFSL
VLLDYNLPDTTGLNCLAQIQAHLPTTPIVMLSAENKAELIQQVLAAGARG
FITKTSPSDVMISAIKLVLSGGVYIPQEMISALNMPFTAHSSDGITHAAS
PAPQTAPPATGDHQLTERQLHVLHEMLKGLSNKEIARELNMSPSTVKVHV
AAILREFNVKNRTQAVAHARQKNIITQ
>Sde_1768 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit
MIKNTKINYDRPASGQIFEYLRDAIVSMELRPGQMIAETSLAEQFGVSRT
PVREALIKLSNIGFVEVLPQRGTYVTKFSTQKILEARFIREALEVAVAAD
LASNVTEELVEACQAIIEAQSKAADEDDSITFQKLDDEFHQMLAQHTQYA
RVGSLIEAEKAHMDRVRNLSLQEAGQFKRVLAQHKAIVKAIKAGDANKAQ
EAMSTHMREVYKILTVIPAEHPEYFID
>Sde_3353 response regulator receiver domain protein (CheY-like)
MKLLVIEDEQAIRQQLEDFFKSQKFVIESAEDGEEGLYLGSEYDYDLAIV
DIGLPKLDGIEVVKTLRARGRNFPILILTARGHWQDKVDGLEAGADDYLV
KPFHTEELRARANALIRRSAGKAAPEMVFGPININTANKSVSLNGAAVEL
TSFEYNTLEYLALNAGKPISKTVLTEHLYHQDFERDSNVIEVFIGRLRKK
LDPDGDLKPIKTVRGLGYRFAPEAV
>Sde_3031 AraC-type DNA-binding domain-containing proteins-like
MTAAPINTNPSSRALTAPALEALANYAGCRNATIHSKGAKTDTLINGHFT
LKREFDGILVHACNMEEQKDALVASQQHAGLTFGVLIEGKITFGFNGEFG
TIEAANGAQGWATNLTQNAAWQRKLTNKQQVIKLVVSVPPQWIKQHLWQN
PAPAFLNRFISTHLARTHWLASGSLVRHAKAVMSSHSNSPSQALHFHANV
LAFIAQALDDIEASGERIFNLHNPNRTSRSLSSQAIKVQQHLEHCINELQ
PGAHIQLEDISHALGMSVSKLQRLSKAHFGCTIAEYIRIRRLEKARHEIQ
HNNLSIGEAAFLAGYNHRSNFSKAFKQYFNLCPGDIAPQ
>Sde_2487 transcriptional regulator KdgR
MTTAKPRTYTAPALEKGLEILELLADVKEPLTLVQIAAKLNRSKSELYRM
LAVLETKGYLAREEGSDHFYITNRLFDLGMSVPPVGTLVEAAFPIMHRLA
DFTHQPCHLAIGSGHRMVVIARVESPSSLGLSVRVGHSLNLFESSSGFVL
MAWMEQQKREKLFQYFEANSETFNRAELEPRLAAIREHKCLRMQSAVVAG
IEDMSCPIYVGDYDHVVAGLTIPYLCGINTGVTPDETLEALKESASEISA
LAQSYGGF
>Sde_1092 transcriptional regulator, GntR family
MESSPSRNLTQQLVHDLGKAIVHGKYDVAQSLPSEAEICDQFSISRSAVR
EAVKMLTAKGLISSRPRQGIRVLPRDRWNLFDTDVLGWILSGKPTLQMLK
HFLQLRGAIEPAAAELAAVGATVTKLRNLETALARMKAAEKGLDDPLDAD
IEFHISILMATGNPFYVQLRSFIETALRVSIRFSNQIKGVQAADYNIHAA
IFNAITEGNPADARRYCEEIHKEAIALIDSELVRQEAL
>Sde_2495 AraC-type DNA-binding domain-containing proteins-like
MLGRIFNIHDVVLIVTIMECLLLALFQLAIPSGTKKDKALLSAFLASIAI
SSVGVLLLWNDSISLGSYFDNSLLPYFLTVSLLARGPLLFLYVQYLTKEN
AIIARRHIAYFLPIPIFIGYIYWFGVQSDHLTMRAEEEAQKQIANVIWDF
VKYFTVAFAVLSILYIRQYQLRLKQQFSAVSMGAVAWLYLLTAGFLLSWA
WGIVTHLLSGQGLIPLVLANAFGLAANYMTFILVNSLFVYSLIYAHSALR
TNQDATTPIVEAEIEDTAPNRIKFAMEHDKVYLKPNLSIEALAKRIDLPV
KTVSSVINVQFNTNFFEYVNTHRVEAAKALLAQPEHAKTPVAEIMTLAGF
SSKSAFHRFFKRVTNMSPSEYRKQHAESN
>Sde_0439 transketolase
MKVELIEKDSLIYQKALMLRYDLFFKEHNLPFEILKDENEDKSFHLAAFN
EESLVGYSRLTRFSRDSFQISQMVVSSNFQGKGCGSQMLSKLIQLALGQG
AKKISLNARKSAIGLYARQGFNCVGAYFFSKRTGVQHIQMVYHANT
>Sde_1313 putative acetyltransferase
MKTENKKIICVDYHNDTHTEDLLAMLNEYASSLEGGAAPLSPATRNNLIP
ALRERSDAVSLLCYVDNKPVGILNAFEGFSTFNAKPLMNVHDLAVSEAVR
GQGIAGMLLDALAKIAEQKNCCKLTLEVLSNNTPAIKCYQNNGFKQYVLA
GAMGVAQFWQKNI
>Sde_1054 Exoribonuclease II
MSNKAVPTDPHARREAEKYENPIASRELILEYLEQADGPMSHRALCRALK
LTDEDHIEALRRRLIAMERDGQLVSNRKGAYGSVNKMDLIRGKVQGHRDG
FGFVIPTDGSDDIYVSNREMRKVFSGDEVLVRADGYDIKGRREGAIVEVL
VHNTQTVVGKYFNEGGIHFVRPDNPRIGHDIMLPADQTNGAKPGQIVEAE
VVRQPERRRPPSGSIKAVLGDHMAPGMEIDVAIRSYDLPHEWPKALEAEI
AAYGREVEEADKLNRHDLRKLPFVTIDGEDARDFDDAVYCEPLKSGGWRL
FVAIADVSHYVAVGSELDKEATSRGNSVYFPDYVLPMLPEVLSNGLCSLN
PDVDRLCMVCEMTISAKGKVSSYAFFEAVMHSHARLTYTQVGKVLAERGN
KNSGARKQYAKLLPQLDALHDLYTIFREQRDLRGAIDFETKETRILFDEN
RKIKDIVPVERNDAHKLIEECMLAANVSAAKFLSSLEVPALYRVHEGPKA
EKIALLHEYLGELGLSMRGSDEVTPQDYQYVLEQIEGRPDAHIIQMVMLR
SMNQAVYQADNKGHFGLAYSEYAHFTSPIRRYPDLLVHRAIRSVIRSNLD
TNKVKRVEQTPVVAKETFYPYTPGDLASLGEQCSTTERRADEATRDVMSW
LKCEYLQDKVGDEFEGVVSAVTGFGLFVELSDVYVEGLVHITALPQDYYH
FEPARHRLVGERTRTTFKLGDSLTVRVVRVDLDERKIDFELIGAKTGRKA
KPKASSKAKAMAKDYEAAQARKPRKRKPKANSPEPAAPVKKASAASRIIA
GVKNAAANLLGRGKAKKAEEGAPIKKAKPSDTKATQERKSTSVESANTGE
KAKPKSRAGRSRPKARSKAQPKKGAKGEASSAPKTRGASAKKTAKPTSNP
KPGAKAAAKPKAKTKPAAKARTTKKPAAKRAAPRKSE
>Sde_2296 response regulator receiver domain protein (CheY-like)
MMLILLVEDNRDLAATVLDYLELQGFDCDYAHRGDHAFQLLQDNTYDAMV
LDIMMPGLDGITLCEKIRAQGNNAPIIMLTARDTLEDKLSGFEAGADDYL
VKPFDLPELAARLKALSKRKSHSSTTLTVADLEAHLENHQVCRAGQQIDL
SPACWKLLIALMQASPRVMSRQELENVLWKDSPPDSEALKSHMYTLRKLV
DKPFDKALIHTLRGVGVALRDE
>Sde_1794 putative cold-shock DNA-binding domain protein
MSDRTKGTVKWFNNARGYGFITAGATEEKEGDDIFVHYRSIRGEGYKSLN
EGQAVEFSLQQGDKGFHADDVALIG
>Sde_1442 sigma-24 (FecI-like)
MSATDKLISLYEKYRSDLGGLIATKFKKNQHDAEDIVQDAFYNVLRAKNI
DTIDNPKAYLYQAASNLALNRIRKNNYHRDYIASMDDTAVDMLTPERNVL
AQHDLKMLETAMDKLPKKYQTTFLMSRMHSKSYKEIAADLNIAESTVEKH
IIKTLKHLRSHLDEEVGV
>Sde_1396 transcriptional regulator
MATIYDVSELAGVSLATVSRVMNNNARVSDKTKQKVTAAMEALDYRPSAI
AKGLASNKSGSVGVLISELHGPFYGMMMSAIESELRNADVHAIIAAGHSD
AAEEKEAIEFLLSRKCDALVLWVESVSDKYLLELSKRSTPVFILGRKING
LAKNCITLDNHMGGYLAASHLAKMGHKKVAYISGPLWKKEAQDRLGGFEA
ALNEHKIKLNENLIYEGDYQEAGGQAGLQYLFKQRAKFSAVFCANDEMAA
GAMSAARDLGLSLPQDLSIMGFDNVKYAEYVYPKLSTINYPVGQMASMAA
KWVLKTVYNNKNIEVLNHFEPTLVERESVAKV
>Sde_3895 sigma-24 (FecI-like)
MEFQYRTYVNQYQRLVYSKALHMLGNSTEAEDACQEVYERLWKHISKVED
HHAKAWLLHVTRNVCIDLLRKRTDTQALDEELVCERSDGNPSNALANSQL
SHWLTHALSKMKEPYKSLIQMAEIQQQSVKTIAQHLGLSENQVKVYSHRA
RQQLRALLQGVDL
>Sde_0290 response regulator receiver domain protein (CheY-like)
METNHGKTTILLVEDDASLAQWIADYLTNNNYHVTTVMRGDEAVKVILTT
KPDLVLLDIMLPGKDGFEVCKEVRASYPNPILMMTARDDEIDEVLGLEIG
ANDYITKPVRPRALVARIKSLLKNTAAADKSDVASTINIGGLSIDNTARS
VHVNGVPLSLSSSEYNVFWVLANNAGEPISRENLIKAIRKIQYNGYDRSI
DIVVSRLRKKIGDDSSAPTRIVTVWGKGYMLATSVW
>Sde_3059 transcriptional regulator, GntR family/aminotransferase, class I
MSHLYQTLATDIVKQIENGHYRPGDKLPGIRAISRQRNVSIATTQSAFRV
LEDDGWVDVRPRSGFYVRARQTVSPIVAAAQSDPKPSNVTGQDMALSLIK
AANKHHILQLGAAVPDLSFLPVQPISQATSQAQKRFGDRALSYEMPPGAL
ELRRQIARRMGEAGCAVSSEEIVITSGCQEALTIALKAVTKAGDIVAIES
PTFYGLLQVIESLGLEALEIPVDPQTGMSLDALKLALERWPIKACVVVAN
CSNPLGYTMPDESKLALTSLLTEHNVPLIEDDVYGDLSFDKHRPALCRSL
APQADIIYCSSFSKTLSPGLRVGWIAAGKHLARVEYLKYVSNIASATLPQ
LTVAHFLESGRYDRYLRQARGQYARAVSRMTDAVLRYFPEGTRVSQPRGG
FVIWVELPCAINTFELAQLALGQGISIAPGPIFSAKQKFKNAMRLSCACK
WDEKVEKGLAWLGARIEHMQLSK
>Sde_3637 Argininosuccinate lyase
MATLDSNDKHDNHAPEAAGEFVSLRDHFLIAMPGLQDPIFSRSLTYICDH
TAQGAMGIVVNQPMNLTLGDIFEQLELQDKAQQAGRAVLAGGPVNTERGF
VLHRDSGAWESTMHIAPDVNLTASRDIVHAIANNTGPKSSLFALGYAGWS
AGQLEEEISANSWLTIPADSSIIFDIPVEDRWAAAARQLGIDIHLMSATA
GHA
>Sde_3042 transcriptional regulator, LacI family
MKPTIKDVAKLAGVSFKTVSRVVNKESTVGEALQEKVWKAINELGYKPNL
SARGLRGAASSIGFIYDNPNSNYVIDMQRGILNECHKRGYELVIHPCNAS
GEHIIDEVIEMIDRSRVGGLVLTPPISENPEILAAIANKKVEFVRILSGS
AAPDTLSPCVYIDDRTAAYTITQHLIDLNHKDIAFLGGDEEHKSSGERLE
GYRSALADNGITPHENHILPGKYSFESGVERTRALLELDGPRPTAVFACN
DEIAAGTLFAARIAGVDVPNQLSIVGFEDSPFSRQAWPNLTTAQQPTSTI
AQRATALLIDTLKSRAEGSQVVESEGFLPKLIVRDSSQTAPV
>Sde_1229 conserved hypothetical protein
MDIPPLSAKTESFVHHFGEMGSRWGFNRTVGQMLALMVIHPTPLNADQIS
GLLGVSRGNVSMGIKELQSWRLIKTQNQAGDRKDYFVAAGSIWDLARTVF
EERSRREIAPTLSLLRSQLLEPPQDENDKLSYQKMEEIHDILELVTEWSN
SLNSLKLEQIQSLMKLGSGISKALEFKDKIVGKGTSE
>Sde_3454 NusB protein
MKVSAAARGRARHFAMQALYQWEMSGNALHVIEAEFHTDNDMSKVDVEYF
HEILHGVAAIKSTLDETFKPFLTGLRLDEIDPVSLAVLRQACYEFEKRVD
VPYKVVINEAVNLAKKFGAADSHKFINGVLDKVALRVRKDEVEAMRTGRS
>Sde_0591 transcriptional regulator, LacI family
MTTKGRKPTSFDIAYRAGVSQSTVSRALRDSPLVNLETRQKVQAIAKELN
YKVDKNARNLRSQQTNTIALLLCEDHGTGDSLINPFFLSMVASIVRASAN
RGYDVLISFQQYSDDWSAEYEDANRADGIIFLGYGDYTTYVQKLNHLDEE
GAHYITWGPVLPGQPGVSIGCDNYNGAREAVKHLLAIGHKRIAFIGDTSD
RSPEFKRRFEGYVQALNDAGIEFDPELQLDAETSEDSGYKAGLKLLADKT
DFDAIFGASDLIAIGAMKALEEVGLLIPADKAVMGFDDIPVSAYTYPPLS
TVRQNTGKAGELLVENLLALIAGESVESFLMPAELTIRGSCGTK
>Sde_0706 hypothetical protein
MTVIYKQASETDIEDIAPLVKALGYDFNFDVAYKTFKSLQTRGDSPVIVT
SNGQIVGMAQALVDVRIAEGISGEIVSLCVLPGFRSKGIAKSLINTARAI
>Sde_2864 conserved hypothetical protein
MSNLEKAIAVATKAHAGQIDKAGQPYILHPLRLMFKFEAEIEMIVAVMHD
VIEDSAFTQDDLKKLGFSNDVIEAIDCLSKRNGEDYNSFILRVSKNELAK
KVKIEDIKDNLNLTRLKIITDKDLRRAEKYHRALALLTKQ
>Sde_0657 transcriptional regulator, LysR family
MKYTLRQLEVFLAVSHYENVSKAADELAMSQSACSSALKDFESQFDIQLF
DRVGKRLQTNEEGRRLRPKAEALVAQAKDLERDLIQHNQVGKLNIGATLT
IGNYLCVKLIDEFIKTHPGAKVRLEVANTRRIAEEILNFDIDLGMIEGEF
QHDELDVIPWMEDELVCFCSPKHRLASVGHISKDDFLKEKWILREAGSGT
RQTFDRAVSGLLSQLDITLELQHTEAIKRAVEADIGISCLSIISLKDAFA
RGALVPLTCDLDLKRHFYLVIHQQKFRSTGIQRWLELCEKHNHINAH
>Sde_3781 regulatory protein, ArsR
MHPVQLFKCLADETRLHSTLLIYAHKELCVCELVEALDLSQPKISRHLAQ
LRECGVLSDRRQGQWVFYAINPQLPPWALSIIAQAHTAEQATLTTLSQKL
EAMCCRPNRC
>Sde_1509 DNA topoisomerase III
MTFSTLGLCDPILQALNDVGYEAPTAIQEQAIPPILAGRDVLAKAQTGTG
KTASFVLPILQTFKDKANRRAKRIKALILVPTRELAIQVEDNIRLYGAHL
SLTSMAMVGGVDIEPQKAKLVEGVDILVATPGRLIDLMHQRALHFDELEF
LVLDEADRMLDMGFIGDINKIIERLPERRQSLLFSATLSDKVRLLAKTAI
VNAVEISIAADKKSTPPITQWLVTVDKHNKSALLTHLINENGWKQALIFI
RTKHGAAKLVTQLEKRGIKAESIHSGRSQAVRTQLLADFKAGKIGFLVAT
GIAARGIDIDDLDRVVNYDLPDDAHDYVHRIGRTGRAGVSGEAVSLISMD
DFKRLCAIESRLGHIIDRKEVAEFKAVKEVPISILNYVKKSAKKPQRR
>Sde_0823 sigma-24 (FecI-like)
MLCARYNTDYENNNAILSMDVAHQQEMIRQAQAGNAAAFESLLDHHYDLI
YRFAYKWCGNAAAAEDVAQLVCIKLAKRLAQFRFESAFTSWLYRIVINCA
KDWQKAEQRHTHAADEHAHVDAEPSANAPNAEHHIYLSQLLSRIDQMGEG
FRETALLVHSEGFNHREAADILGVKESTISWRIHEIRKRLTSEDGGQSS
>Sde_3960 transcriptional regulator, LacI family
MSKPTKKPTPQMSDIARLAGVSKSTVSRALANSPLVNQETKDLVQKIARE
QNYRLNTVARNFRLKESLTIAVLIPSAGNAGWRLSDPFFLELLGSIAEAV
DRHDHQLLLSRTSAQDSDWIEDFVNKRRADGIILIGQGSQHEAINKLAAT
FKAISVWGAKIDEHQHYPVVGSDNVLGGHRATAHLIERGRKRILFLGYNT
LPEVSQRYRGYCDAHASANLAIDPKLQVATGSDESDGYLAVINAIESNID
FDGVFAVSDVLAMSAIRALQERKISVPKDVSVVGYDDIALASYYNPPITT
IHQNRSAGGKILVDNLLEAIEGHKPEMISLNPELIIRGSS
>Sde_3900 response regulator receiver domain protein (CheY-like)
MPINAIIVDDEAHARQALQHLLGTYKEINIIAQCENGKTAVKAVHELEPQ
VMFLDIHMPKLDGFEVLELLGDAAPITVFITAHDDYAIQAFENNALDYLL
KPVSEERLARTVERICQRIKEANLTAQPNPEGEQSQRTTDVVQNYIQRQA
PIGRVLVRDKGDVHVISTTNIIAIEAADDYVVIHVPGGTHIKQERLSRLE
ELLDPQQFCRIHRSTIINLDYLQGIETEGKDTRFANLKTPEGEQKQFAIS
RGGYGKLIEVL
>Sde_2181 MCP methyltransferase, CheR-type
MTSASQPDNQHIAVFSPYLQGFYLGEIVDQIRQLCSINHYKFTAIRTDSL
ATFDIPLGVSHFTGVIILKNAISPALADRILTMGIPVVSIAYDYYPLEIP
VVGCDNEQAVALAYNYLKELGHNQIAYVGDFSQYDLRKRFEYFGKLCDQD
KDSNSDLDTFYPVDNSLYRGGLNAAKAFLKRGDTSTAVICGAGLTAIGFY
EKINKSNRKIDVVGFDATSITPIYAPNIIAVDQNLHLIAHKALAVIKNIQ
QQEEVQREEQVPARLILPNENKDATLNDYMVTCTEKNIFANPNYAKALIT
NNYEWTKQIIDSNLDELMSIYPVFRDFMQAGLLCRTKLGANNETQLVATR
AYTESETINLGSMDPPLSFSADTYPVEKHNSHIFIEGMINTHFPITVGGK
NWGVLSFSGPANLAETNSSYMGFTSYVDTVTQNLAHVLLAKTVLKTSE
>Sde_2319 conserved hypothetical protein
MSIRIARASDTLAISSMVKSLAHFYLDDPKKELPDWLAETLTEKAFLKRI
SEGGFLNYIYEISGRIVGYISLKEPNHLYHLFVSEQFQGNGIARTLWEHV
QQSVEYDFFTLRSSIYAVPVYKTFGFTESGPLGAKDGVSFQPMELIP
>Sde_0361 putative transcriptional regulator, TetR family
MNSSPAPTKRSTPNRLMDVAQAMFVKNGYHGVAVDKIIAQTGVSKGTFFY
HFKSKEDLAQRLLERYFERIAAAANAIGTAAAQQSDDPRQILDICLTEFE
NLFNGRHVQGGADESLDGCLMAAFSYQLFNHIPSLRAISAQAINRFSTAY
APLFDEVLATANSPTGISGETLSKHYFALMQGTLLVSRIDPAWTDFKQQV
DSFKKMLNALLK
>Sde_4009 ParB-like partition protein
MAKRKGLGRGLDALLSSGAAATPAEAIKAATSAAADVTTNVDGILKNLPI
EFLQRGKYQPRRDMHQEALEELAESIKSQGVMQPIVVRPIGDNKYEIIAG
ERRWRATQLAGLDTIPAVIREVPDETAIAMALIENIQREDLNPMEEAFAL
KRLQDEFELTHQEVADAVGKSRTAVTNLLRLINLTEDVRTLLEHGDLEMG
HARSLLSLNEGQQRTAAREIVAKGLSVRQAEALVRRLQQEAEQEKSETKT
KIDPDIQKLEEKLAEHVGVPVIVQHSAKGKGRLVLKYNNLDELDGILAHL
KYEH
>Sde_1661 Outer membrane lipoprotein carrier protein LolA
MTVLKLVQSSSLPEAEEVYLPSQDSYDMKSPLEAMVYSYRILAHSYKYDS
FNQAITSLLDAGIKKLGMETALLTRPVSAQIFEVVACGGKCEGFYVGQHL
SLQETPCLTVFQKNETCAYTNVERMCGKVPAMAYNQTQVGAYLGTYVQPH
FAEPGVMCFTAPEARLTEFSAEDVVFIELLAEGVAFMTDQLRAQAQRKLT
DQAMFALGSVKTLDEYLEQARLPEVFGVPARVVEVLQRRIGHAPLSIGHV
AEELNLSKRTLQRRLQQQDVNFAELRDQVRFHYSIDYLIKQHQSIDSISA
SLDFSDRTSFTNAFKRWTGLSPSTFRKLFRDYV
>Sde_3962 fructokinases
MSNTLIAAIEAGGTKINISVGYTVDEPLMATRIPTHTPSDTLPACVDFLQ
TAQNKLGAIKALGIASFGPVDIDKQSASYGTILNSPKLAWCDQNILEAFN
VFDCPIALDTDVNAAAYAEHQRLEKSNCNSVYITVGTGVGVGVVINGATL
TGELHPELGHCYSERLAIEPKGVCIRHGDCVEGLISGPALKQRWKILPEE
AESDHIMWESVGFHLARLCYTATLAYSPNNIILGGGVLQNTFIIPMVHKY
FAHLAGGYLPAKAVPQNLDSFIKASSYSTGAGLAGAFLLARENINE
>Sde_2643 Exonuclease
MDSVMFDQNKIVTIKDQIADQMRSDIIAGELAPNTKLNEQSLSKRFGVSR
GPIRDVLLQLTKEGLLVSKNNCGVSVNSVLDPAMQTLMIRIRREIETHAI
SSLKGKLDDADFDALDSILNRLKDAFKQEDFIEVTKADIDFHRYLVYKAG
GQELVNLWHPIVLRMRMNYKRITNPKACVDEHKAIANALKEDNIKAAKEA
LLANIR
>Sde_4002 transcriptional regulator, AraC family
MLNAANTVNSKMAYTQAAYSQALSSSAQTHYLLPSDKTIVAHWQPAILLN
LMCNSLANEEAIALSNKLLKGTRLFYSDFSKTNLFISPEQFQRFIVNCNA
TPNQSDLAFRFGQRLLPGHYGDFSHGLNQVNSVFAAAELIQKCAHVFSPL
LTPKVNVYATELTISFYSSYGCGNSHRFVCEAFIFAIKNWLEQQLGRHLP
WQFEFNYTAPEAIENYEVYLGDNLKFNRPVTAIRLPIEYAHSSWQVSENF
TLPCAATPVSLLNLVRQLLRNNIQANPSLEWLAQQLDISPATLKRRLKAC
NTQFRDLLSEIRLEVAVELYQQQHFSSDAICQYLGFYDESNLRRFFKRTT
GQTHTQYLALT
>Sde_3656 transcription termination factor Rho
MNLTDLKSKPIEELIDLAKEMGMESLARSRKQDVIFNILKRHARSGEDIY
GDGVLEILQDGFGFLRSAGASYLAGPDDIYVSPSQIRRFNLRTGDTIAGK
IRPPKEGERYFALLKVNEINFDKPENSRNKILFENLTPLFPQERLELETG
NGSTEDLTGRIIDLVSPIGKGQRGLIVAPPKAGKTIMMQNIAQAITRNNP
ECHLIVLLIDERPEEVTEMQRSVRGEVVASTFDEPPSRHVQVAEMVIERA
KRLVEHKKDVIILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLSIVATALIDTGSKMDEVIYEEFKGTGNMELHLDRKIA
ERRVYPAINIRRSGTRREDLLMKEEELSRVWILRKLLHDMEDVAATEFLS
DKLKDFKTNNEFFLSMRSK
>Sde_1314 putative transcriptional regulator, TetR family
MAETNDRKADRYHHGNLKTALVDGFLEMLPSTTIESISLRKLATHIGVAA
TAVYNHFSNKDELCAAVKLRCLDHFAQWLESHVEKNAEPEERIYALSKAY
FQYSLQHPQYFQFIFQIDIPQEYVTAELIETSMRAEQELRNSVIALLEKH
QLPTTQYNEGLGAFACWSLAHGVTTLAAKHVNHAACLSGRWPPEFMLDNK
ESINAAFEPLSKVVIAGILAVAKK
>Sde_0297 sigma-24 (FecI-like)
MAEDEVPDDKQLLAAIASGDTEAITVFYQRHEARVYRYALAKVGDSFAAA
DILNDVMMQVWRAAAKFEGRAKVTTWLLGIAHNKVVDHWRKVGAREYTEL
DDSMEDESASGANPAQATEAASDGKLLHACLAKLKPEHREILHLVFFEEL
GYSEIASIIDVPEGTVKSRVFHARNLMKKQLANATRAA
>Sde_0095 sigma-24 (FecI-like)
MKHDSEQILNEWLVAAAQAGDSAALQRLIARWQPRLLSYSVSQLQDREAA
QDVVQEVMLQITKKLMQLQDPAAFPKWAYQILQRRGIDWIRRKQTRRKYE
QPMPDDESHVELGGTTTPDHAQNISLQQALHSLEPEAQQIIRLFYMEGFS
VQEIGSIIDKPEGTVKSRLFAARNKLKQVLEGGHHD
>Sde_3760 putative cold-shock DNA-binding domain protein
MSNTTTGTVKWFNESKGFGFIEQKSGPDVFAHFSAIASSGFKTLAEGQQV
EFTVTQGQKGPQAENIVAI
>Sde_0924 DNA-directed RNA polymerase
MAYSYTEKKRIRKDFGKLPDVMEVPYLLAIQLDSYRKFTQADTPFDQRKD
MGLHAAFKSIFPIVSYSGNAALEYVSYALGKPVFDVKECVLRGATYAVPL
RVKVRLIIYDKDSSSKAIKDIKEQEVYMGEIPLMTDNGTFVVNGTERVIV
SQLHRSPGVFFEHDKGKTHSSGKLLYSARVIPYRGSWLDFEFDPKDLVFV
RIDRRRKLPASILLRALGYTTEQMLDMFYETSKFGLTETGECVLELVPSR
LRGDVTTFEIKDKDGNLIVEDGRRITARHIRQLEKAGVTELSVPHEYMVG
RALAKDIINAESGEVLFECNTEITDEVLAELVKSGVKEFETLYTNELDCG
PFISDTLRSDPARTQLEALVEIYRMMRPGEPPTKESAETLFQNLFFSSER
YDLSAVGRMKFNRRLGRDSEVGSGTLSNEDIVDVLKTLIDIRNGKGVVDD
IDHLGNRRVRSVGEMAENQFRVGLVRVERAVKERLSMAESEGLMPQDLIN
AKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAG
FEVRDVHPTHYGRVCPIETPEGPNIGLINSLATYARTNSYGFLESPHRKV
VDGKVTDEIEYLSAINEAKFVIAQASAAQNENGELTEELVSVRFQNEFTL
KGPSEVQYMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLK
AQKPLVGTGMERNVAADSGVCVVAKRGGVIERVDAARIVVRVADDEVEAG
EAGVDIYNLTKYTRSNQNTCINQRSIVRTGEKVSRGDILADGPSVDLGEL
ALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELTCIARDTK
LGSEEITADIPNVGEGALSKLDESGIVYVGAEVASGDILVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSSVKGTVIDVQVFTRDGLEKDQR
SRDIEKAQLDQIRKDLNEEYRIVQGATFERLRAALVGNTAMTGKGVVKGQ
PVTDEMLDELSHDDWFKIRMNDDVLNEQIDAAEVALAERRKELDDRFEDK
KGKLETGDDLAPGVLKIVKVYLAIKRRIQPGDKMAGRHGNKGVISVIMPV
EDMPYDENGNPIDIVLNPLGVPSRMNVGQVLEMHLGLAAKSLGEKIDEML
KQQKAVAEIRQFLDQIYNQIGESYKAEELDTFSDDEIIELANNLRDGVPM
ATRAFDGAKEKEIKQLLTLGGMPDSGQMTLFDGRTGDPFQRPTTVGYMYM
LKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG
AAYTLQEMLTVKSDDVAGRTKMYKNIVDGDHRMEPGMPESFNVLVKEIRS
LGINIELEQDN
>Sde_0637 metal dependent phosphohydrolase
MIERQHLLVMRALDSEGSLAAAADTLNLTQSALSHSIKKLEDRLGVTLWQ
KQGRKLRLTQAGEYLLRAANNLLPQLEQVDTMLRAFGEGRKGQLRLGMEC
HPCYEWLMTVVAPFLTRWPDVDLDVIQQFRFDGLAALREHKIDILITSDP
MDAPELAHCPVLDYELLLVVAANTPQAKLTSINAGDLQQQTLITFPVERA
RLDVFTHFLIPAAIEPKRQHAVETIEVMLQLVSSNRGVCTLPNWLVEKYQ
HHHPISGVRLGQSGVHKTLYLVYRRDDSKLDYINDFLTTASKR
>Sde_3707 transcriptional regulator, PaiB-like
MYIPKHFKEENDDLLFEFIRKHPFATLITTHTHGAEANHLPLYLTTSNAG
NAILQGHIAAANPIWKTADQQQVLVIFQGSNAYISPNWYPTKAIDGKAVP
TWNYEAVHIRGEITFIHDSDWKIQLLNDLTAEHEQHFKQPWTIADAPEEF
IRKLLPAIVGFEITLDDIQGKFKLSQNQPVENKQGIAANLSNQGDPMADL
IR
>Sde_1787 Repressor lexA
MYKLTTRQQEVLDLIKSHIEDTGYPPTRAEIANQLGFRSANAAEEHLKAL
ARKGAIEMVPGASRGIRLPETIQGIPLIGRVAAGNPILAEQNIEDYCDVP
PDFFYPQANYLLKVQGMSMRDAGILDGDLLAVHSTTQVKNGDIVVARIED
EVTVKRFKRERNNATIQLLPENPDFNIIEVDLRDANFSIEGLSVGIIRRE
L
>Sde_1016 response regulator receiver domain protein (CheY-like)
MPRHIVIVEDEEAIAQNYCDALRRQGYKVTHYRTRPEATEAFAARLPDLA
IIDVGLGEEIEGGFDLCRDLRSRAPELPIIFLTARDSEFDVVSGLRLGAD
DYLTKDISQVHMLARITTLFRRIDALQKPLAKETNIQRGSLTMNMDRMTA
HWNDIAVDLTITELWIVHALALHPGHVKNRQQLMDAANVVLDDNTITSHV
KRVRKKFKAIDDNFDAIQTAYGMGYRWLNQ
>Sde_0954 1,4-alpha-glucan branching enzyme
MNVAIEPKNLSGGRLYQRVAEQLAAVIAEGEYPPGSRLPAERKLAERFDV
SRPTVREAIIALELAGCVEVRGGSGVYVSAESNNNLSSAEFAVGPFDILE
ARILVEGEAAELAAKRITDEELVEVRAALEAMVQENEQEPICEKADQNFH
MLIARATKNEAVASACAHLWALRNSSPVSARILEKVRQSGSRPRIEEHLL
ILDALERRDPEGARDAMREHLSRVIQQLLDATEAEAVEEARRKIAFNRER
FGISK
>Sde_3440 response regulator receiver domain protein (CheY-like)
MSNPLTVLLIEDNLTIASQVCDCLEGVGWQVDHTVKGAQGIELALAQVYD
VVVLDLNLPDIDGLEVCKSIKQQALTFLPILMLTARDAFDDKADGFGMGA
DDYVTKPFELRELVLRCSALARRHNLHNNKILRLGNLEVDTAKRTASRSG
QVLQLTKIGFEILSVLAQAYPQPVTRSVLIHKVWADDPPDSDALRTHIFS
LRSALDKPFNSPMLTTIINVGYKLEIKQELKQELEQECIKESRNEV
>Sde_0180 AraC-type DNA-binding domain-containing proteins-like
MLNFYKQITAYFFVKLLLSFAVIFLAYHFMEVSIPLLPKEKSPYAWSLRA
FSDQLLGGKSTVTFLGDSRSIYYRYQVNTAVKFPFAGARLTFEKLEDLSR
YTAVSFTSQCDKYNVMTFHIHSFDAHITKDDDFYSYRFAEKDFTCEATKN
QHIIDLKYLNVPVWWLKQNNIPVSDTHYRLDKTRALSFDNDHRGPLGIPL
HTHIENLTLHYQDWRYIWLAIGLLTVTWLIFLIYWLKRYSRCLVSTVKMN
IAENKPFIAYQQLSLEPHRDREKTELLRFMGLEFTNPEMSLEYTVKNLGL
NRTKINNLLKEELGLTFTAYLNKLRLAEASKLISNRENRNISEIAFSVGF
NNISYFNRLFKNEFGCTPKKFESISKDR
>Sde_3594 CheW protein
MGTSLQPAYMMAPGQNLNAYIQTVNGVAVLTAEEEKALAEDLYYRDNLDA
ARKMVMAHLRFVVHIAKSYSGYGLSQSDLIQEGNVGLMKAVKRFNPEKGV
RLVSFAVHWIKAEIHEFILRNWRIVKIATTKAQRKLFFNLRGQKKRLAWL
TNSEAEAVAQDLNVDVKHVREMEGRLASFDATFDAGADEDDDTAYQAPAN
YLEDRRYDPSTLLEDEDWTENSVSGLTTALESLDDRSRDILQQRWLSDDK
STLHDLAAQYGVSAERIRQLEKNAMKKVKTYLEA
>Sde_0647 putative ATP-dependent RNA helicase DbpA
MSDSSNTAFSSIGLQPGLMQNLESLGYNTMTPIQAQSLPNIIAGKDVIGQ
GKTGSGKTAAFGLGLLNSLDVKRFYVQSLVLCPTRELADQVAKEIRRLAR
AIHNIKVLTLCGGMPFGPQIGSLEHGAHIVVGTPGRVEEHVRKNNLDLSK
LSVLVLDEADRMLEMGFQAALDAIIETMPKQRQTLLFSATFPEEIQAIAS
RIMTAPVMTQVESTHDTSTIKQRFYKVDNDDQRLLAVRLLLLQHKPESAV
VFCNTKRETQMVADDLAGHGFTALALHGDLEQRDRDLTLVRFANGSATVL
VATDVAARGLDIESLDAVINYHIARDMEVHVHRIGRTGRAGAKGIACSIY
SEKEHFKLARLEETMGQQVVNDKLPPTSVLDYPAPKPKMATLQIDGGKKQ
KVRPGDIVGGLTGENGIAGTEIGKISVFDNSSYVAVALPVMKTALNKIRD
GKLKGRNFRVRAIT
>Sde_1647 sigma-24 (FecI-like)
MSLFKARIRIADTNDAGLVLASLGGDRDAFCEIVTRYQNLLCSLAYSSLG
DLKYSEDVTQETFVEAWKKLDSLRDPEKLKSWLCGILRYKVSHFRRKEAN
QPIKGADELEELDEKNETPASEGKLEDQAISAQQQALLWQALEKMPETYR
EPLILFYREQCSVEYVASQLDLTEDTVKQRLSRGRKQLQKAMITFVEDTL
TKSKQGTAFTVAVMAAIQGISPPVKASILGTGAVKGGLLFKWASLLIFMA
SFAGIISSYFGLRAGLAQSRTQRERKRTILFVSLFFGIVIIYILGMFGLK
HFAVNDHTMAAGYSTAAHLLVLAFITSYVVLVIRMLKGMRKLRAQERLFH
PEAFQAQADQLHSKQREYKSRLRLGGIPLIHFRFGMPEIGDKPIVGWIAG
GDLAYGILFAWGGVAIAPISVGIISIGAISIGAVGFGLFGIGTIAVGAIA
FGASAIGYKAYASFSSLGWESAFSNGFSTAIDAAIGPIAIAQEVNTPLAA
DIANLSLMDQSYLWIMAAIIVLVIVPAVLHSNKVRKIMGKH
>Sde_3953 AraC-family transcriptional regulator
MNKTLTLAIYRDRILAVVDYIWRNIERDVELNTLADVAHFSPYHFHRIYR
EMMHETVSTTVRRLRLHYAACQLLRTNHSVETIATTLGYGSGEAFSRAFS
RAYTVTPSAYRQQRSPLPEAKMALPSRRFYAMKHTVDIEKFNKVELGGLA
HQGDYLDIGAVFEKVFVSAGSKQFLNEHSRSFGIYYDDPTSKDKSALRSH
ACVTLNPQQVKEAGLDYLTLEAGNHAVLTFTGPYSELEQAYEWFYGEWLP
QSGYQLADRPPFEEYLNDPKTVPPSELLTKIYLPLAE
>Sde_3885 putative transcriptional regulator, TetR family
MKISKEQKLETQRKIVSAAADLFVLNGFDNTTMKQIAREAGVGDATIYKY
FANKDKLILGFYDTRGADALAEYRNTDDLESFTFAEKLQLLVDTFLEQLM
ADREFVELSLKQIIKSPITLLKDELEVAKSYKQELTTLLSNLDHDEAYPD
IPMQGMLATLLTDYILGITFYWMKDNSKGFSNTTQLTDLSIGIIDSVLKS
GFINKAIDMAGFIIKTHLLRGLSSGGGLLNMMQEFKETLAKQ
>Sde_3718 PhoU
MTLTELRYIVTLAQEQHFGRAAERCHVSQPTLSIAVKKLEEELSIALFER
SKTRVYPTPLGTQIVEQACRVLEQASAIKDIATAGKNQLTSPLQLGAIFT
IGPYLFPQLIPAIQKLASDMPLYVEESYTATLRRRLRQGDLDAIVVALPF
TEADVVTQKLYEEPFVVLLSKDHPLAEKEAIQPDELSDCNVLLLGEGHCF
RDQVLAACPNLKPGIDDPRGKIRTATEGSSLETLKYMVASRLGITILPLS
AALSGHQSSDMLVTRPFAGDAPTRTIALAWRASFPRLQAIDVVREAIGEC
SIASKPAI
>Sde_1961 putative transcriptional regulator, MerR family
MKIGELAKRSGCSIQTIRYYEREGLLSSSARSDGNFRLYDHQAEERLMFI
KRCRSLDLSLPEVRHLLTLSQAPGSTCGEVNEMVDQHIQQVEERIDELQS
LHRQLHDLRNNCSENRTVEDCGIIRSLVQQKGSK
>Sde_0324 conserved hypothetical protein
MFKFYQKVGVVSIALLLLTLLVGGICVDRTFLTAKFLPADKSTFNWRPET
WADKDIGGGSTVVIHDAKYSLDFEFKMASALEYPYASMAISILDEDGGEL
LIDMSRYTRLSFMVRCEPHNILFFAAHMVDEDVTDPEDPSKYRSPSSHFS
CEKEWAQVHIDLTRLKTPQWWFDKFGLDLSREAYRLTQVSKISIGATHQS
PQDVSSLVKINELTMHGRDWRYMYALAVWVVLVWGGFIFWLFRAHTNALI
AELKRKFEKDRPLIAYQQLSMQPQRAKEQSDILRYMTTEYANPELNLDLA
VTQLGVSRTKINAILKDEIGYTFSAYLNKLRLTEAARLLTESDRANVAEI
AYSVGYNNVSYFNKLFKTEYGCTPKTFKDVYKG
>Sde_1253 sigma factor RpoS
MAVQEIEISRFEEEESIIATGITFDVESAKEPESPTRKRATATRASAESE
DAYQKNLDATQLYLNEIGFSPLLSAEEEVFFARKALKGCEASRKRMIESN
LRLVVKIARRYVNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATW
WIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARELSQKLDHEPSPEEI
ATLLEKPLEDVERMLALNERVTSMDVPIGPSSEKTVVDTVADQDVSDPVE
LLQESDLSQSLDGWLDELSEKQREVVARRFGLRGHETSTLEEVGKEIGLT
RERVRQIQVEALRRLRDILEKQGLDAASLFGAM
>Sde_2724 response regulator receiver domain protein (CheY-like)
MTDSIAPRVLIVEDEPDLAQLLNEYMQAAQYSTTVINNGTDANDWLQANE
VDIVLLDLMLPGMSGLDICRDIRKASDVPVIMITAKVEEIDRLIGLELGA
DDYICKPYSPREVVARTKAVLRRTLSDTSSSEDQNQSVVLCEERSSVIVH
KQEIELTQIEYRMFKLLFEQPGRIFSRQFIMDNIYTDYRVVSDRTVDSHI
KKLRKKLQAAAPEQDIIRSVYGAGYKFENL
>Sde_1120 Exoribonuclease II
MLDKTTLSQLSQLKQAIHESKEYATGTVASTNGRFGFVRLTDGRDAFLDP
EKMQFVLPGDEVKILVTTNDKKQLEATIEQLIDSPLKRFVGTYRVKGNAH
FAVPDDPKVNRWIFIPPKSRKGCKEGEKIAAKIIQHPAQDGKAQAKVIER
IGQPDDHHIEYKYTVAKYDLSPWNKEGEDEQLKKIRASIEAEEFGEREDY
TQLPFVTIDSPTTRDMDDAVHIAEQDGKTVLTVAIADPASFIAPGSPLAK
LAERQAQSTYMLGGIIPMLPESLANDCFSLVEGKKRPALVCTITLANDGA
VEDYKFERAVIQSKYKLNYQQVAEFLEGTNIEGLPADAADNISKLSELAT
LRYQYRTEHNLIGQDQLDYDIRLDDKGKISEIRPRSRTVAHKLVEEAMLL
TNQCAGEFLAQNKLGLHTVHGGFRLDRIGEVNALLKEEQITPEGDITELE
GNLQLIKALSANERQRNLIPALRRMMQSAELSDEAGPHMGMGFKHYATST
SPIRRYADLYNHWAIHSVLTGSKPYTFKPHQLERLKETLQAGRQADREIY
QWLLCQYVEASLIGFEGRGKVRIVTQQGFGVRLIENGVDGFIAFPKSQEK
QFDAKRMTLTVNGVTYRADCEVDVKVVSVDQEKRRIAYALVSPDAE
>Sde_3828 putative cold-shock DNA-binding domain protein
MVIARINFKNSPNKEEMSMSKGTVKWFNADKGFGFITPADGGKDLFVHHS
EIQAGGGYATLNDGQEVEFEVGQGQKGPCANKVQPL
>Sde_3820 response regulator receiver domain protein (CheY-like)
MINVLLAEDQSMVRGALAALLNMEENIRVVAQVEDGKAALEYLNRTHSET
DAIDIVLTDIEMPNITGIELAEVLAEKFPELRTVIVTTFGRAGYIRRALA
AGVYGFILKDAPSEILAEVLYKAMAGKKTIDPELAIAALDDKDPLSDKER
KALRLAGSGKKTAEIANDLCLSEGTVRNYLSEAISKLNATNRIDAARIAR
QKGWL
>Sde_1840 Gentamicin 3'-N-acetyltransferase
MPLEIKQITENELSQMEALSAVFGEVFSDKETYTENKPSADYVRSLLSSD
YFIALAALDESKVIGGLAAYELKKFEQERSEIYIYDLAVIAAHRRKGVAI
ALIERLKIIAAERGAYVIYVQADTGPEDKPAIELYSKLGVQEEVLHFDIE
VKGNHGVT
>Sde_3808 AraC-type DNA-binding domain-containing proteins-like
MKEHLFNFHDVFLLITTAICLLLCLFQWLIFEKRPERGVLAGFLFSLAVT
NITVLFMWSDKIIVPPFAVVWILPYTLMASLLLHGPLLFLYVRMLTRHNA
ELHKFDLWHLAPLVVLFVVMASLGIHSVDLLQRTERPAETDIIGIIWAIA
KIQPVVYCVAAVLLVQRYIKRLQHQYASFSLTEPVWLMMLSGGFLLNWGW
SFLVYLIAKFSSPQLADKLGIADNYVTFVLIIALFVYGVAHAQKLLSTKP
DTPRETHEDNYDKRDIDRIVQAMETDLLYLEHNVNLESVAEKVKLSSRTV
SQIINKHFGTNFYEYINSYRIEAAKRMLADPAYKEMTILDILMKSGFNSK
SAFHRFFNRLVGTSPTAYRKKMLTEKE
>Sde_4004 response regulator receiver domain protein (CheY-like)
MRKIINWYGFEGRLALIFWLGYMAWLVVFCVIHQMVIMDSGVNVVSSILW
TLREWGFWMLITPTLVSLLSKTEHYEKPLKAKLHILGAALIVALLYKVAV
NLYSGRSDVLATLVSYSPKYLQVLLVISLGWYVLLKGEQVYYANKNPTTE
PDSPKNNASRLLVSTGSAEAFIHVQDITAVQAAGNYVDIHTANSSYILRA
TLKHLLEQLPQAQFVRCHRSAVVNINYVKQLHSFATGKGELELECGRLVP
LAKSYRTQFKQSVINTADC
>Sde_3717 ATP-dependent DNA helicase RecG
MSAHPNELAALPVTVVKGVGGKLAQTLAKLGIHTLQDLLFHLPHRYVDRT
RITPIGKLRLNMAAVVQGCVVSANIQFGRRRSLACTIEDDTGSLMMRFYH
FSAAQKDKLEPGTLVRCYGEPRMGTTGLEFYHPEYDIVDDPSAKPVEEAL
TPVYGLTEGITQPRIRKLAEQALLELKHHNPAEYLPPEVGQMFGVDSLAD
ALRYLHAPPPDAPVEQLIAGLHPYQQRLAFEELLAHYLARQEARARAQAE
ASPVLRVAEQQRQAFLAQLPFTPTFAQTRVLGDINRDLQEGKPMLRMVQG
DVGSGKTLVAALAALDVISAGYQVALVAPTEILAEQHFIAFSNWLEPLGF
NVAWLVGKLTASKRRDTVASIAAGEVDVVVGTHALFQDDVLFASLGLAIV
DEQHRFGVNQRLTLRQKSIDGTIPHQLVMTATPIPRTLAMTAYAELDYSV
IDELPPGRTPVNTVLISQKRRPQVIERILAACKENKQVYWVCTLVEDSET
LAAANAEETAELLKNALKDINIGLVHGRLKAAEKEAVMKAFKAGELQLLV
ATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSIASHCVMLY
GDKLSMQAKERLGVMRETNDGFEIAEKDLALRGPGELLGTRQTGEMEYRL
ADLQRDAGMLDDIHEIGDSLCAHHPETVEKILNRWFGARREYMQA
>Sde_3997 Glycyl-tRNA synthetase, alpha subunit
MQTHNAVATPNALLLEEANLHNLKTLWHTYGSKLVHKQNGLTLWRNTGWP
HRAWFDINEPHPSPNTTSDSNGELVAAIQQLPKGTVLPLYPHLLHNSPVA
TALATCTFNGPEFMQQAMVLALENFKPNTKGYPPELNFKTVTTQPSLKAW
CAVASAAFGYNVAIANAQQLLEQPNALLILAYKNAVPVATALVLLTGHTA
GIHQVGVLPTQQGQGWAKAIMQFVLSYAVQQKARHAVLQASAAGEPLYKQ
LGFNAQFLIKNVVLS
>Sde_3459 protein of unknown function DUF193
MHCRVFRGGIGAICGIMRAICPSKSLSAMHCPFCSETDTKVIDSRLVADG
AQVRRRRECLTCHDRFTTFETAELVMPRVIKQDGTREPFDEEKLRAGLQR
ALEKRPVSVEAIESSVQNVKHYLQALGEREVKSLMIGEKVMEELRSLDQV
AYVRFASVYRSFQDLSEFQQEIDRLQKPKPSPIK
>Sde_2471 sigma-24 (FecI-like)
MLASTTSRQKGPERRMDTDYRRDDNWSGLLERVATSQDQTAFAALFEHFA
PLIKGFCQMHASGLSGENAEELVQEVMFKVWQKAPSFDARKSAASTWVFT
IVRNTRIDYLRKNSKHTTNIVDGLEADDIWDESLDHQPFVYLQQARDTES
VRDFLSTLPEDQSHCLKKVYMEGKSHTEISEELNLPLGTVKSRVRLGLKK
LQSCVGGK
>Sde_3118 response regulator receiver domain protein (CheY-like)
MKILVVDDHAYNRDLLQFILEDEGHSCCEADSGEAAVKMFLENEDIDLIL
MDVNMPLMNGIEATEKISEIKGPRAVTIIFVTALDDSDILIQCLNAGGDD
FVPKPVNESILISKINAHARNIENYKQLLDAHNTLDMHNKNIRREHEIVE
NVFRNSLTRSNIECDNVVSYSSPMSMFNGDLTLTAPSPSGGQYFLLGDFT
GHGLSAAIGSLPVMNVFFDNAAKQVSVSALAVEINNQLYRILPMGMFFCA
AIGHLDKTGTQLTVWSGGMNDALLLSSDNKSITAIPGAHMPLGILRPEEF
DDRAQLHELEKNAKIFFYTDGVDEAQNKDGELFGDDRVRETILASNDNYI
TNIISAVKEFTGDEHQDDDISIIKIVCAPCVHRSKNTGNIVDVAADFHSI
DSFPWQLLISLESIDLQRSDIVNQVVSFLGTIQGVELHQDKLFTIVSELF
NNSLEHGVLNLDSSIKNTAEGFEEYYRMREERLREISDKQIHIALRYVLG
TPNRVEFEITDSGEGFDYETVLMRGEDTNALHGRGIGLLQTLCSKLEYSE
GGRKVTAHYDFIE
>Sde_3616 GGDEF
MANCIGDSTVQTGLLALYAHPRLSAAIQAMHDHPAKSWSLEALAQQAAMS
RTAFATAFKELSGWTPMQYLTWWRMQLAWHLLADGEPVAIVADKIGYQSE
AAFSRAFKSEFKQTAGEVRRGARN
>Sde_3558 putative cold-shock DNA-binding domain protein
MSNRVTGTVKWFNESKGFGFIEQKSGPDVFAHFSAIASSGFKTLAEGQQV
EFTVTQGQKGPQAENIVAL
>Sde_0550 two component transcriptional regulator, winged helix family
MSLILLAEDDRRLANLVKDYLGNHGFDVVIEEAGHNVARSVQTLEPALVI
LDINLPGKDGLSVCKDIRPKFNGPILMLTARDTDADQILGLEYGADDYVI
KPAEPPVLLARIRALLRRYNQEISKPQDEYTFGELTIHMAARQVFIGGEE
IKLSSHEFELLCTFAAQPGKVLSREYLFNIIYSRPYDGMDRTIDVRISQL
RKKVGDASDNPTKIKTVWGRGYLFVADAW
>Sde_3025 Phenazine biosynthesis PhzC/PhzF protein
MGFTIFNFHDVILWMTAMQCLFFACLLVATNEAKLKSTYFLAAFLFAHAF
IPVHEMILWGAEFKLIVRDHMPSIYFIGGAAYYLDGPLLYLCIKALVFRD
FELKKRDVWHLIPVLMFIVFMLLTFYRLPFEQRDYLIRSEEFVYGNGYVL
LEFMAKSMRVVYCVLCLVLISKYKKLRESTHSDVQKMDITWVHMLVLGVL
AIVSMEMVLAITKVINLFESFHWAIFEWMGLSGYYMMFILVNLLVFTGIR
YFASFEPVHLAEASKKPLQEHMLNPAVAAKISDAMAKDKPFMEPDITLDN
LAASLGYPPKDLSMVINRHFGVNFYEFINQYRVDEAKRMLVSEEYKNTTI
TDIYLMVGFNSKSVFYTFFKKKMGVTPSQYRRSGGDSPAG
>Sde_3000 response regulator receiver domain protein (CheY-like)
MAREGLARMLSDYPAINVVGKAADAHEAKVLIEATKPDVLFLDIHMPGKT
GLELLEELDELPKIIFTTAYSEYAIKSFEYPTIDYLLKPISQERLAVAVN
KLLSDDTLTQQVQPPARKLELNSKIFIKDGEACHLVALNDIYYIESCKNY
VRAFFANKKAFVRKNMTQIEEVLPSEIFFRASRQGIINLNHIQNIEASVG
DGYEVTLTNGVVAEVSRRNAARLKEMLSF
>Sde_2540 2-oxo-acid dehydrogenase E1 component homodimeric type
MLHFTQQQIRRQTMDIEKLKLFISLAETLSFNRTSELCHVSPSTLSRTIQ
QLEAQLNNRLFERDNRTVTLTHQGNTFLGFARDIVQQWETAQESMQADAN
KLKGSLSIYCSVTASYSFLFDMLKNFRAHQPDIEIKLHTGDPALALERVI
SGNEDMAIAAQTPNMPKDVCFKRFTASELIFIGPSGSEAFFREEKEHEKD
YLQRLPLIVSERGLARQRLDSWYKSNAIKPNIYAQVSGNEAIVSMVSLGL
GVGLLPKIVLDNSPLASKVKPFTGLPNLGAFNVGLCVLEKRLRSPIIDAF
WSQIKSN
>Sde_0379 putative transcriptional regulator, XRE family
MTFDHIGTFIRNYRQTNGESLQALADRSGVSRSMIAQIESNQKSPTVTTL
AKLAGAMSISLGDLVEPSKHTTHYVIVKGSKTNIVSKQNSPFVCHQLLAQ
SNSCNVDFYHFYFSKYGKTGFAANKLGTQKTVWLDTGQITLHLHNETISL
NAGQAIHFAASTPHRFENRSGPLAKGCFTVSYSN
>Sde_2243 Ribonuclease III
MNQNDRLVARLGYTFKDKSLLKLALSHRSYGKQNNERVEFLGDSLLNFII
AEALFAKFPTAKEGQLTQLRANLVKGETLAEIAREFGLGDFLLLGEGELK
SGGFRRASILADAVEALIGAIYLDSNSSMPTCRERVLAWYATRLDKVELK
ATAKDAKTLLQEYLQERKMPLPTYTVLAEGGEAHSRQFTVECTITGKSKP
CSAVGNSKRIAEKLAAEKMLSQLTNA
>Sde_1235 GreA/GreB family elongation factor
MRTPLITPQGLKDLKAELDELWRVERPEVTKKVSWAASLGDRSENADYQY
NKKRLREIDRRVRYLRKCIENLKVVEYHPDQEGKVFFGAWVEVENDEGEV
LTFRIVGYDEIFNRKNYISIDAPMARALLKKEVDDEAVVRTEAGKTTWYI
NAIRYEP
>Sde_0916 transcriptional activator, putative, Baf family
MKLYVDAGNTRTKWRLADGREGVVASDDISGMERSFALLAGVVTGVFVCS
VLGEAFNRRLEALCGQLFGVPPHFARVKQGVLDIVPAYERLDTLGVDRWL
GLVFARSHAKSQCSVVVGAGSALTVDLLDAQACHLGGWIAPGCASVEAAL
GGKVQFARSEAYLKALQSDGALTPPQTSAFGSSTVACVQAGVDAMIRGFL
QQVIACAGTEFGGREAVYFLAGGDSPRVEAMLRELDPNLELVLSPAIVLD
ALVLWSEWCA
>Sde_3322 putative sigma-70 factor, ECF subfamily
MHSQETSSPFEDDLPALIDAIYRAESRRIYATLIRLIGDMQLAEEAMHDA
FHVALSQWQDKGIPDNPRAWLVSTARFKAIDQLRRQTHLAETLEAITPLS
DSEALDWDGDIIEDDQLRLIFTCCHPALDPKLQIPLTLREVCGLTTEEIA
SAYLVTPSTMAQRIVRGKAKIRDSKLPFEIPERSQLAQRLDAVLAVVYLL
FNEGYSATKGDTLLRVELSSEAIRLSRQLLELMQDSEIEGLLALMLLHQS
RSASRTNSAGDIILLEDQDRSLWAKDLIDEGRFRVGRAFVLGSVGFYTLQ
AAISACHAQAPTWLETDWQQIVQLYEALSQVDPSPIVELNKAVAVSMLEG
AEAGLKIITQLIRGQELEQYHLLHAAHGELLSRTGELMGARSAFERALSL
TNQEAERRVLKLKMSRLDAI
>Sde_2928 AraC-type DNA-binding domain-containing proteins-like
MNLVVFNFHDVVLWMTAMQCLLFAGLLLATNTSKNISMYFLAAFLVAHAL
IPLHEMILWGAEFKLRVRNNWPEVYFIGAAAYYVDGALLLMCIKSLVFRD
FKFRKTDLLHLLPLAAFIVFMSIAFYSHSYAERLHLINSETFVYGAGYTF
MEFFSKVVRFGYCFLCLQLVFKYKHLLKSTHSNVEKVDITWISMLVVGFM
IVMGLEAILAFSKVIFLFKPYHMDFFQKMGLTCYYSLFLLVNLLVFTGIR
YFSSFEPVKEEPEKPKDGAKKKISDHLLNPDLAREIDEAMRGTKSYMEPD
ITLEHLADELSITARDLSMIINRHFGVNFYEFVNRYRIEEAKAMLASPKH
SDTTITDIYLAVGFNSKSVFNTFFKKLVGTTPSQYRKELA
>Sde_0068 putative transcriptional regulator, TetR family
MPYTKAHKSKTREIILENSFRLFSVKGFKGVTINDLMNNCGLTRGGFYAH
FSSKAELYREALKFRASRTKLAGLKPEGTSNEEWLALLLNKYLSLEHVKG
ERSLSCPLAFLTTDINMQNKEIKAAYADTYHGMNTAIMEYASSYTDCDEQ
DILSVTAMMIGAVAIARTLQDQDSIERLLSACRREVGLKLGGI
>Sde_0781 putative transcriptional regulator, XRE family
MLIRKLRLDRGISQEQLAEATGLSIRTIQRVEAGHRVSYASLRVLAATFN
INVDALEQALYAMNTSTNEYIEKPLWVRLVLSLPSLRGLDRPSLLKHEVC
LVGYAFFAYVASYLIPSVETFYWNLTTVDLLHFSAFSALFLAYISSIIPR
LRENSKERNPTLPK
>Sde_3619 histidine kinase
MTASAGFIRLLNAKVDIYHNAKICGNWQINAHHVGRTCFHVVTEGMCLLA
LPGQADCVLRTGDLVLFPKEIEHTLMPVDPLAGEQQHLPYVQAQHLEGTG
LLCASVQLNHGAGRYLLDAIPEVLIIRNNSANAWLSPLTELLRIEHYQQG
PLGDVVIQRLCELMFTYAMANCIEDSTVQTGLLALYAHPRLSAAIQAMHD
HPAKSWSLEALAQQAAMSRTAFATAFKELSGWTPMQYLTWWRMQLAWHLL
ADGEPVAIVADKIGYQSEAAFSRAFKSEFKQTAGEVRRGARN
>Sde_0506 transcriptional regulator
MSNIREVARVAGVSVATVSRALSHPEKVSPASMKKVKQAIEEVNYRPNML
ARNFRSAKAYSIVVLVPDIANPFFSLVIRAIEDQAQKRGYAVLLGDTQDS
GAKEKEYIRLVETRLADGIIQLRPHSPDAPTNKALGLPYINLCGTEDTPG
PCIRIDNVLASKNMVDYLISLDHKRIGIITGLRGNPHTMDRMKGYKQSLA
EAGIEFDERLIAEGEYSIWSGVNAANKLCGLDKPPTAIMCMNDEMAIGAV
QSLKSHGYAVPQDISVTGFDDIDYARYCDPPLTTISQPAEDMGKIAVDLL
LRLIEGEELSKEEHVLPYDFIVRKSTDKAKEG
>Sde_3265 regulatory protein, LysR
MEQFNWNHLKYFYHVAREGSITKAAERLYVTPQTISSQLALLEDSLGYSL
FDRHGKRLKLNQEGQLVLRYAEDIFKTGRELLAELKNAELSTRRVVSIGI
LDSIPKILSCQILDRVYSTSENIRIVTHETDFEQLLADLALNKLDMILSD
RPVPPNVAVKAYSKLLTTSNFTFFATPKRARKLRASFPESLNHQHFLMPG
ERSVQYTHVLSWFSRLDLTPIILGEFDDTELMKMLGQQGRGIFCAPTIIA
KYIQLQYGVKSIGTTDKIQESYYSITPERKIKNPVIELIHDMYKDG
>Sde_1673 acyltransferase-like
MLNNHQTLKVQTVNWQEASSILSSIRRTVFIEEQGVAEHEEWDTEDEHAQ
HFIVYLNNKPIGCARLLASGQIGRFAILTEYRNQGFGQQLLRHIAKHAWE
TNRINTLFLHAQLSALGFYQKLGFCEYGDVFLDAGIEHKSMRFSLFTEGA
ATQNNALKLFDNSVLRFEDRENALNALLLCIANARKEVRIYSSKLDHSLY
SDSQFIEKLSQIARHNRNSEIKVLLQNSRPLHSKRHPLIELAQRLPSKIQ
VRITARTVDPTETACITADRKQIIFFNNEDALKGFLNLNDQLEVKNRIEE
FDYIWQKQSETDPNLQRLSL
>Sde_1270 Gamma-glutamyltranspeptidase
MELQAVKTDRLYIKVAEQLSKLVKDGAIKPGERFPAERDLAERLGVSRPT
IREAMIALELSGVIEIRTGSGIYVSKKKAKVETQIDSGDKGVGPFEILEI
RYILEAEACALAAARITDEQIAQLKEALKEMEEEEKQEDASEKADWKFHS
IIAEASQNSAIHSIVNWLWKLRNQSELSTAFLERIRKEGVHPSINDHVRI
IEALEKRNPEKARMAMKMHIENATAAAAAYFGKES
>Sde_0799 sigma-24 (FecI-like)
MSNAQTIASAQAGDRAAFSQLIAESATPLRAVIRRMVGHPDDTEELYQDT
LLKAWQKIASYRADASFSTWLCAIGARTALDFLRAQKPWRERAQIAYGNE
CATDPDLGAEVLATLSEPSFTFDVHEHIAYCFACVGRSLPAEQQAALVLR
EVLELSAKEAAEALALTESVFKHHLSAARKTMTTAFDSLCSLVNKNGVCY
QCKGLRMASSNSAHEKTDTIDNLDERIKLIRTVNLDSGVSKVMHDLFWRR
TAEFEATGRGNCEQQSHCGRKN
>Sde_3891 hypothetical protein
MDDKKIGLLQRAVVNFMICHDLLTPQIDKQLRPLGLNLTQMSLLNHFSHA
PQQRHTISQLVKVMGINQPGITKAVNALEKLACLQKQNDKDDARIKWLQI
TPYGLEKLNEARQTTGPLVFSAFGSVADQDLQSFCDGLEQMKVFLDRNRG
>Sde_0480 response regulator receiver domain protein (CheY-like)
MSEPKLPSLRTVIVEDEPIAMLQMKSMLQGCPTIEIVGEARNGKQALDVI
QDVQPDLVFLDIQMPVLTGFEVLKALQGDTLPLIVFTTAYEEYAVQAFDL
HAVDYLLKPFSEERLNKALARVMERWQLAEEDQKGTLLQAVEFILNKGEG
PSVSAGAEPKLAIKESGEVLLIPQTEIDWVDAAGDYMCIHSKGQTHIQRC
TMKQLLEKLDSRRFCRIHRSTVVNVDRITKVIPHTKGESFLMLDCGEKLK
VSRNCREAIQQFLAS
>Sde_1258 ATPase
MSTTNKYAAPALERGLDILEYLVSQEQPRSQTEIAIGIGRKPNDIYRVLV
GLEARGYLLRDEHSGRYRLSFKLYNLSRSISPIDKMRQCALPYMEDLAVG
IGQSCYLAMLYQSQTMIIVHARGHSPISLNISEGALFPTSASTAGKVLLA
NSKTKVRNMILQRDNTYTALAKPKQTALLAELDNIKDDGCLSAASPFIEG
ATDFAALIGVPEGEVIAALAISSLKSNWGSATPAEELREKVIATAQHITQ
QLGSL
>Sde_2274 AraC-type DNA-binding domain-containing proteins-like
MDVVLFNTHDVVLLFTFLQCIVLAFILYKPQKERAVSNVFLLAFLLSNAV
IPFELLIHFGTAFRPWAIDHLPNWFFVFEFGYWLQGPFLLWYLRSVLYKT
IRVPLSDAFYFVPFVLFLLHQVIGYHILSTDEKISIQQSFKLHTESFSIY
YITLMRELLRVYFGVLCLLELKNYLKVTSQKHIVADTSDVLWLRIVVYGF
LGVWGWSVLVVAMLICNVQFFWHLPVGTMGIMANYVTCGILCGLVVVVGR
KARVVENLEPVSSSPPKQHAGVTINLEYVEQLEKLMHEDKLYLESSLTLE
VLAGKLSISPRTLSTVINRHYGCNFFEFINDFRIEDAKKRMVDPARSGAT
MLDIMYEVGFNSKATFNSFFKKHEGMTPREYRKKNTQAKEPA
>Sde_1838 Cytochrome c-type biogenesis protein CcmF
MNEAAIYKALGDPIRLEIVKRLSTESTCTIGELSTNLDVSRQGARKHLQV
LVSANVLILEQIGRQTDVSLNKHSLKIARDFIAQLERQWDNRLETLKHYV
EGSK
>Sde_1926 hypothetical protein
MKPSSYSPHYDKLRAWMKQKREESGLSLRAVGELVGRHHSVVGKLEQDRR
KIEMLEFIAYCQAVGADPHEGLDLLLQQSHRQ
>Sde_0293 putative transcriptional regulator, TetR family
MAGGRQREFDKQQALSAAMHVFWQKGYVGASLADLTSAMGINKPSMYAAF
GNKEQLFVQATEHYMAVHAEPLFPLLHTPNQSLKQRVGAYMRAVVAAQCA
GETPLGCFVSLCINEAASQSMPQSAVTLIEQAKGYAENYLTQLFKDEITA
GNLSPQTQPATLASLLVTLMHGTAAMARGGKRFEELEPLLEITLQQVISG
SNS
>Sde_3722 putative transcriptional regulator, TetR family
MSKKEEDIIQSATKLFSAFGYHAVGIDTIIAESNVAKMTFYKYFPSKELL
IEGVLKRRDEDLQAGILRTVESCRTPMAKLKAIFNWYENWFCGADFHGCM
FIKASEEFPRGATRVRDIIENFKRWLIELIKEILQQAGAANAAVLAQHVV
VVLDGLTVKFNMDVSVAHTEMANNWKLIKKLVQLHIKDK
>Sde_2875 transcriptional regulator, LysR family
MINVLWLRSFCTLVEVGHFTRTAERLNMTQSGVSQHVRKLEEQLGVPLLV
RHGKQFSLSSAGEKLYAGAQDIMQALVSLERNVGEDPPFEGLVRVISPGS
VGLKLYPHLLALQKTHPKLIIDYRFAPNADVEAAITNATADIGFMTSKSS
AADVRCAPIAEESLLLVTPKTATEPDWHTLMGLGFIDHPDGAHHANLLLG
ANFPEFAHVNQFPKKGFSNQIGLILEPVSMGLGFTVLPAHAVEAFAKPEL
ISVHSLVNTAKETLYLCGLRHRSFRQRMETVIAEAKNWL
>Sde_0541 conserved hypothetical protein
MTKNIDHELRCSVAIATRLIGDTWSMMILRDFMIFGGTRRFEQLREGLNI
SRNVLTERLNTMLEGEIIRKSPVTEGAKRMEYKLSRKGWELMPILTGIHQ
WCETWRQDPTNSMLEFVDSQTKQPIKALSLYSQDGRELGPPDVSVLPKSD
EAIEYLEKFNTPPKK
>Sde_2051 3-isopropylmalate dehydrogenase
MRKDSRLSRVLHILAHLATSDEPVTSTQIAKFQSTNPVVVRRTMGLLREH
GYVESTKGRNGGWAISRPLSDITLLDIHRAFGESSLFTIGLTDEHAHCPI
EKSINESLAAVMNETEALLLKRFGEITLDALYKQFPKH
>Sde_2365 sigma-24 (FecI-like)
MSAIIRLFKSKPSAKDRFQALLRPHIELMYRMAYRLTQSQSEAEDLVQDV
LTRLAKRVDEMEQVESLRPWVLRILQNRFVDLYRREQNSPVDYQSAQEDD
SGEDDRSGANVLTTASDSTNDIKRLELQQVLQVALNKLDDVHRDVVMLHD
MEGYTALEVADILGINVGTVKSRLHRARDKLKKWLEDS
>Sde_3525 Cold shock protein
MAIRWNEEQPIFRQLEQHIKSLILDQAIKEGEALPSVRVLAAEFTLNPLT
VSKALQELVQQQLIEKRRGLGMFVCEGAKNNLLQVEREKFLQEEWPKIKA
RIERLGLNTQEILKQGEAKK
>Sde_0984 glucose/galactose transporter
MQSAVNEFLTPRHIDVTELGPTRAKVVLEPLERGFGHTLGNALRRILLSS
MPGCAVTEVEIDGVQHEYSAIEGVQEDVIEILLNLKNVAVVMHGKDQAVL
SLSKQGPGAVTAGDIQVDHDIEIKNPELVIANITSDTSLSMRLTVSRGRG
YQPVDARATDEDETRAIGRLQLDASFSPVRRLAYSVESARVEQRTDLDKL
VLDLETNGTIDPEEAIRRAATILQQQLAVFVDLEGEKEAEPEQKEDQIDP
VLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDILASRGLSLGMRLENWPPASLKNND
>Sde_1721 putative transcriptional regulator
MSEENIQLQNIIEGAILAAGEALSIDRILSLFDENEQPEKDDIKQALLAI
QEKNAGRGFELVEVASGWRFQVVEDIAMWVNRLWDEKPQKYSRALLETLA
LVAYRQPITRGDIEDVRGVAVSSHIIKTLVEREWVKVVGHRDVPGRPALY
ATTRQFLDYFNLKSLDELPTLGELKDIDGLNEDLAFEEAVEASKTEDLAE
SDAQEQAADEAQQAAAGEAPVAENPETTAEKGAADEAAVESETLSDDSMD
DELAEADTDAGIENENETDGSETSELEQDQEQVASAAAEEHDAAEETEQL
DDADTDSAASDDIDEDETLAEQDLNTSEEADAPASELDESQTLEETSEEK
LD
>Sde_3733 response regulator receiver domain protein (CheY-like)
MKAYVVEDSRLARKELTDLLAEHTELNLVGDSGRADEAIEQINKLRPQLV
FMDINMPGKDGFQVLEALDYSPRIIFVTAYADYAIKSFDYDTVDYLLKPI
SAERLQKALDKLQREPTQQADREAEPNYTDTPVDTTAQLEEKSRIFIKDG
DQCHLVELAKIIRFESCGNYTQVYFDSKKAFVYRALSKIEERLPDLTFFR
ASRQHIVNLEFVTDIQPWVNGGYQLTLKNGEQIAVSRRHATRLKEILSL
>Sde_3422 response regulator receiver domain protein (CheY-like)
MSKQLPNAERLKNNFITYPNRWAIGLLSAWMLLNTLVLATTDLMEAKRVG
RELAVWEPFCWELSSIVLIVLAVWPIARIDEKLKAKLPLLGVCAAHAALV
IPFSVIHVTGMVWLRKLCYWLVGWEYKFGNVVYEFLYELRKDAMTYITIL
IVINCFQFIVRRLQGEASYVQESETSTKPIPDRLLVKKLGKEFLISVADI
DWVEASGNYANLHVKNSVYPMRITMTKLERLLPEGVFSRVHRSAIVNINR
VTHLQPLDSGDYTIYLASGAEVSLSRRYRDNFRATSATAAG
>Sde_2888 AraC-type DNA-binding domain-containing proteins-like
MKKNKPYCEPFCIQQGYNFEVHHVSYSDNDPYSCFMHFHEVHELIVFEKI
EGTFFYNQGESSLQDYDMVFTPALETHDFELSSRQKSWHIIQFLPSFLAD
NGLASAESFFKYGMHLRLNACDSKDIHRVVTWLHESYRRDPYSDKSQSLL
RLLLTWLAESASPLKSPHTEAIQNSSSYAKLEPVVNLFRHQKSVELSLNE
AAAMCCLSPSYFSRLFKSVFRYNYSEYSIRHRLYSAARMLSQSEFSITDI
SYELNFSSPSHFIALFKKQFGVTPKKYKTTIKERLL
>Sde_2727 GreA/GreB family elongation factor
MSLTKYPMTVAGELALREELERLKKVDRPRIVQAIAEAREHGDLKENAEY
HAAREQQGFCEGRIQEIEAKLSNAQVIDVKTIPHSGKVIFGTTVDLINVE
TDEAITYTIVGEDEASIKLNKISVTSPIARALIGKEEGDVAVVRAPGGEI
EYEIDSVKHI
>Sde_1909 putative cold-shock DNA-binding domain protein
MSDKLNGTVKWFNESKGYGFISREGGNDLFVHFSNITGSGFKTLKEGQSV
SFTEGMGQKGPQAENVEPL
>Sde_2600 response regulator receiver domain protein (CheY-like)
MHSKPTVLIAAPNLATCLQLERAFKQSNYHAVTTHHEAELSKQIQHCVQR
ACVFILHYQYYQNLAQPLRHSQPLLLLVDSASAELIDILPNPTSDFVLSQ
AAPIEIITRLEILLRRCSQAAPSNLVQPNSPMTASYQALALTGAEHALLE
LLAQHPNTVLSKEYLCSHGLQRTYTPGERSIDVHISRIRQKLTDALGQTS
PIKSVRNRGYIYSPPHEPINKPTHK
>Sde_2183 Transcriptional regulators-like
MSALHLCVIAPYLQGGYMGEIINHIRRACATREYRFTLIRTNSLGEFSLN
LGASEFDGVITIRNAASPKMVEYLQNRAIPVVAIAHDYFPLDVPIITSNN
AKGMDLAFNYLLERGHKKITFIGDLSQYDLRKRFERFCELLDENKLQLTD
KSLICVDDTLFTGGREAAAQFIKHVDQVDAVICGAGNTGMGFVKQLKAQG
VNLPEKLEAISFDDVAFMELITPGMPRIDQNLDQVAAHALEALEALITQT
PLTTHTLHVDPTLIIGKPATAERNWQMRVHELDGLNNLNYVDSLVNNSFE
LTHKILNSNLDKLMSLAPLFQQHMHLACLAELKKDKFNRTRLNIKKIFES
ASAEVLLLEDEENLVPVESYPGKAFKEKYGNNHPTLVHFPIFVDDVLWGF
ISVFGDPQRASYPTSFTGFTGYMDTIAHSYSLLLSKQQHEVESETTEPLI
SDTPDILTPCLKWDLETGSVVWNEKALEKLGFTTDLEKSIYRNMEVFDRV
HPEDEHNLRKEITLSLSHLDRMNTLVRLKLAQGGYAQFRIEGEVVQKKDD
RAVIYRCVISQIN
>Sde_2087 putative transcriptional regulator
MITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHI
LFDRLGRDVALTEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVA
TSHHIGLHHLPPILREFAANHKQVNLQFDFLDSEQAHEKVLRGDCDLAVV
TLAPTLEENLEASVLWPDPLCFIVGANHPLATSKNISLEELSRTPAILPD
LNTYTGRLVKHFFDTQGLALNLNMATNYLETIKMMVTVGLGWSVLPKTMV
DSSLKILPIKNIQLERQLGVVIHKKRTLGNAARAFFEVLSANSQIKQIN
>Sde_3977 transcriptional regulatory protein
MRKFSTFAKLICKNAQMNNWDDLRYFLELARCGSLSGASRELGVNHSTVA
RRIAALEKKHGVKLFNRQPNGYQLTEAGDVIYQHALEIEQQNQTVERLLY
AGDTRLSGKLVVTMPHELANHCIIPYLQDFTGKYPDVDLELVVSPGLKNL
SAREADIAVRVTPAPPETLVGQKLANLRHAVYFSKQHPQVLAEQKIIIWR
QDTNPPAWAQQHFPNAKVVLKVDDLASMYAAVKVGIGIARMPCYLPDSVL
DADIFKLDLALTPSDWGIWVLHHADLRETARVRAFKQFLIERLQILRPLF
EGEMGKRVNGDYSSS
>Sde_3955 putative transcriptional regulator
MDKLTALKFFIATADCGSFSGAAKQFGSDPSTISKAVRRLETELGVLLFH
RTTRSLALTEAGHQYLGTAKSVTESLNNTEFELADKSNEPRGTLRINAPF
TYGRRYLVPAIQSFREKYPQVKFDLQFNDAYIDIIENRFDIALRSGSLKD
SRLIARQLSPMDFVVCASPDVAASLPADFSPMHFNQVPWVRFRFKQTGKL
MPILFKVDGIIAEMECNADLVVDDGESMTELCVQGAGLAQLPHFALKADL
DAGRLVPLFPSCTYSSFGIHIIYPKREYLPLKTRLFIDHMQRFVEDLGET
PQSTWARELRR
>Sde_3290 transcriptional regulator
MQAPYTNLKTHHKWVEFSAEDTTLNLSNASVEQLQEWKQQLSAEYDNVLA
RKLNLDLTRGKPSAEQLSLSDAMDGILAGDYITASGIDVRNYGGLEGIPE
ARAIGSDILGVPVENVLAGGNSSLTLMYQTMAIAHQFGLAGEGSAWSQEG
TVKFLCPVPGYDRHYSVCEHLGIEMLTVAMTSTGPDMDQVEKMIAADPSI
KGMWCVPKYSNPTGVVYSDETVERIANLGNIAGKNFRVFWDNAYAIHDLS
DNPVALANIFEACKAAGTEDSVIQFASTSKVTHAGSGVAFIAASDTNLKF
FKLALGFMTIGPDKVNQLRHAKFFAADGALSAHMAKHAAIIKPRFASVLK
HLEAAFSDNDLGEWESADGGYFISFDTRPGLAQKVVKLAGDAGVKLTPAG
ATFPYGKDPQDSNIRIAPTVPTVDQVEEAMQVFVLCVKLASVEQALANS
>Sde_3661 putative acetyltransferase
MIHSISSANFERIIPLINAYQQFYNVDHVSAQQNRSFFSQFGMQSDKGCQ
FAYFDGTEPVAFATVYFCYSSTLTAKVGVLNDLYTLPSHRNKGIASKLIK
HCAKFAIERGACRLQWVTARDNTTAQALYKKLGAKQSSWEFFSYTP
>Sde_3601 response regulator receiver domain protein (CheY-like)
MKKWKDVLDIGPQCVERFVDPTRTPELVEADIQLAGVSRLEGAYRVGHVA
ADIHTVLFSVNGQGVLHTDAGSQAITSPSVTVLPAGLPFLFELDSASWST
AWFCFYNTRQWRALASSAASVEYCEQALQVYHLLSVLYYEPEPSLRLSSM
HLLSHYLNETLTQPRVARDDYQRVDTLFRQVENQLHFNWSIEYMCDLVHY
SAPHLHRLCRQRFGRSPVQQVIYLRMERAKYLLQHTDWSIAQIGGQVGYT
DVLNFSKRFKKSLGQSPGHYRTQSRDKL
>Sde_0093 hypothetical protein
MTHKNQAISYALSDSAIAHELGQRLEQLRLEKNIDQQTLADELGITRKTY
RALAHGEGKMVNFIKAMRVLGELEQLDKLLPATTFSPIELLKLQGKQRQR
ARTTTKTSSKHTHSPPEEDLDW
>Sde_3668 response regulator receiver domain protein (CheY-like)
MHILIVDDEPLARLRLQRLIDALPDYTVVGEAANGDEAIEATLRLDPDIV
LTDIRMPGKDGLEAAHVISAMEDPPALIFCTAYDEYALQAFETLAAGYLL
KPVKEEQLRAALEKVTRTTKVQKSALKQVEEGASRQHIAAKTRRGTELIP
IDDIYCFIADQKYVTVYHAEGETLIDDTLKELEEEFAQRFVRIHRNALVA
IKGIVGMEKTAEGQYAVCIKDSEYRPLVSRRHLSGVRDLLNRL
>Sde_1924 putative transcriptional regulator, TetR family
MATKTSSQPPHMKVTDQKRAAILDAAIKVFGAQGFEPSSMDQIAKVADVS
KRTVYNHFENKEALFAEILNQLWERSPFKLDIEYQPSKPLKDQLTDLLWQ
TIEMLSEPMFLKLARVAIAETIHSPERAQCMLDRLAVREESISAWVRAAS
NDKKLNVADVSFAANQLHALIKGFAFWPQITLNSPPLNQEEQKRVVESAV
DIFIDTYAIK
>Sde_3127 transcriptional regulator, GntR family
MNDTAIEQETSLSRVELVYRKLRDNIITNQFPPGYQALEPEIAKQLGVSR
TPVREALIRLEAENLIQLVPRRGMRVLPLVPDDIKEINEILTGLEVMAVE
LLAKQKPGRDLLEPMESALDEMDKSLLTGDMELWAEADEKFHRFLLALAG
NQRLASMAESVRIQSQRSRKITLKLRPSPESTNSAYRKLLNAIAAGNWQE
AKEVHYQHRLEVSQMLVDLLEKYQLPHL
>Sde_3200 Dystroglycan-type cadherin-like
MAAILYPARPLVDADPNMKFAELGLCPAIQKAVLEQGYETPTPIQAQAIP
PVLEGRDVMAAAQTGTGKTAGFTLPILEILAEGIENGRKVKPNQARALVL
TPTRELAAQVGENVALYGKYLPIKSTIVFGGVKINPQMMKLRGGVDILVA
TPGRLMDLYNQRAVKFDQLEMLVLDEADRMLDMGFIHDIRKIMAILPKKR
QNLMFSATFSQDIRELAKSIVNNPVEITVNPPNSTATRVKQWICPVDKKE
KPALLTHLIKTNKWQQVLVFSRTKHGANKLVKQLEGSGLRAAAIHGNKSQ
GARTKALAEFKNGTVKILVATDIAARGLDIDQLPQVVNFDLPQVAEDYVH
RIGRTGRAGAEGNAVSLVSADEFQMLKEIERLTKTLLTREVIQGFEPDHN
LPESRLDTRPIRPNKPKRPKPAGGASNRSGGGNSGGGNNRAKPRGDDSKA
ANADTPWAGKAKPRKPRPAGAKPATQGKPAGARNGNTGPKGKGGPAGGGA
RRPTNKPSGAQGAARS
>Sde_2491 Quinolinate synthetase A
MNQIAHDTLLFNLHDLILLMAVGQYVLLAVLLFCTRKQTEKSSYLLCAFL
LLNAAQSVDTLIIWSDQLRLLTLNWHPNLFFWGHIGVWLQGPLLYLYVAS
VLYKDFRFKPTDALHLLPAITVTGLLVNAYYSLPKAEQIQGMQNLQFMWT
PLMGNLTTLRYLSVVAYGAWCLFALARYRKQLRHQYANLEVSERSWLTWV
VLGVVLIASWALVVHLIGNNIEHTLSNFMGIGGNYFSFIFVNSLVFTSIR
YTHLFDGLSSTQPVSAEEPTAEEKGFKDEHILRIQNYMQQHKPYLDNNIN
LEHLAQKVSLPERTLSRIVNQHFNKNFFEFINTYRIDEAKKLLKQDKTKA
IIDVLAEAGFSSKSTFNSIFKQQVGMTPSQYRKLE
>Sde_3287 transcriptional regulator, GntR family
MKPEIGNAPQRTYRKVVEKMLSSLNAGEYPSGARLPPERELSERFGVSRP
TIREAIIALEVMGRVEVRTGSGVYVLKNFKPATSNEYEYSPFELTETRVL
VEAEVAALAASTITDEQLADLEGALQEMAQENEIGNLTSEVADKKFHAII
ANSTQNRPLINIIERLWDIQANLPDIQYAHNAICKKDGQRRLEEHRAIFD
ALAEHDSQKARIAMRAHFTRSLEALHATTEARAVEEIQKQLTQRRERFSL
ARLDLG
>Sde_3613 AraC-type DNA-binding domain-containing proteins-like
MRSPHTKTIVFVLLISSSIVGAGLSFWLATTQHSLLPAPRSQHQWTARTI
SDSEMGGASHIALKDSDYALDFDYQITPQLAYPYVISVLDFDHKEQASSY
VDLSHYQTVSFDIKCQHTNMLSFNVATFDATVTKPSEFPTFKIVSHLFNC
ENKWQTIEVDLHHIPAPRWWLESFNMPLSDQSYNLKKTRALTFGASRHGP
MNLVTNVKVSQLQLNGFKWPVIYAYIVILVVGWLVYAVWALRGFVRRIRQ
NTLPSHVGLPQAVELLPYRAKEKQQLITFLDAQYRNGELSLAYTASTLGI
NRNKVNDILKQEFGQTFSSYLNWLRLDEAARLLSSNDNVNISEVALYVGY
KNVSYFNRLFKETYQCTPKVYKTKHIKAQSTISQL
>Sde_3957 transcriptional regulator, LysR family
MQKETIDLKLLHYFVTIAESLSFTAASESLNIAKSALSKGISKLEDELGT
KVFERSSRVVRLTEAGQILYHRAEVLLEDADHLVSDIKTLQNSVSGHLKI
AAPPTLGRMLAAEIIPPFLKQWPDVSISLKLSYDYEDLFKEGLDLAFRMG
VNRDQNLIERPLGRANRVVVAAPDYLAQHAPIRTPHDLLPHKSLQFSNHI
PQEWTLQNRAKVEHVTLSVALQCSDLAALRNAARAGLGVAQLPWMLVRDD
INNGHLTHVLPQWLSTGLPIALVYKEGHRKAAKLAEFLKFVEAYKQLFEL
RFGE
>Sde_1602 HI0933-like protein
MKVVFLLCPNMLATSVTLPLELLRAAEALNNSARDLKNKNVKALDIQLAS
VNGQPVKTHTGLTLNADCAVQGCDDADIVYLPALWRNPFPTVSGSPTTTA
WLNNLYENGCTIAGVGTGCCFMAEAGLLDNKPATTHWHFFDAFQHRYPLV
QLKRQYFITQAGNLYCTGSVNALADLTVLFIQRYYSKHVASHVERHFFHE
IRQAYQSGTSLLEQENSHPDEEIIQTQIWLRDNFAKEIKLNDVAQLFSMS
PRTFTRRFKSATGRTPLHYLQNIRIDVAKDLLQTSNLSVSEIMFRVGYHD
PTHFTNLFKKSLGVTPSQYRTTVRAKLFSV
>Sde_1505 Rhs element Vgr protein
MQKLKYAAKLATAENTALPFAVYTSLKEQTILNVPIVKPLLVFVLDGCKK
LGANGDVRCVNGRFVFLSNGTKIDMRNIAESDEYFALLIEFDYTDFNCLH
QKAVNINAAPYFLGEITPLLEGTLQQFIEWAAIAPAELWHIRRQELLQTL
FHLGYTQVCSIAGAPSLSAKVHAIISTDLTYDWTMDVITQKLAMSESTIR
RKLTAEGTSLQAVKDSARLSFGLHQVQSTFQPINHIAEQCGYLSQSRFTN
KFKQLFGVTPTALRKTRLSD
>Sde_3696 DNA-directed RNA polymerase, omega subunit
MARITVEDCLDYVDNRFELVIVGSKRARQIATQGKEPLVAPENDKPTVIA
LREIELGLIDDAFLAATDAEPVEHFAEPSEENADNLYPEA
>Sde_3544 General secretion pathway protein G
MTTQSETLPILLLRAREKAISYVRPVLADLDLTEQQWRVIRALFMHEALN
TQQLAESTCILGPSLSRILAKLDSDGVIVRKADAADQRVVNIRLSAKGKR
THQRIFKSMSKQYQQFSSDMGAAKVEKLNNLLMEFVGQVD
>Sde_2388 sigma-24 (FecI-like)
MTDESNVQSIYLSIQKALSRAVSRIVPPHDVEDIVQETYVRVCQVKQPST
ITHPRSFMLKTARNLALDYIKRADNKLTDSLDEDTQDNLASYKDDPYRRA
AGEQDFALFCEAVRQLPVQCRKVFVLKKVYGYSQQEIAKELGISQSTVEK
HIAQGLKRCANFLDNKQDKSTMQVVRSSHSKGASL
>Sde_0224 urease accessory protein UreG
MTTTKPALRLGIGGPVGSGKTALVKVLCAILKEKYNIAVITNDIYTREDA
EFLLRHEVLEADRILGVETGGCPHTAIREDASMNLSAVAELQDRFANLDV
ILIESGGDNLAATFSPELSDLTLYVIDVSAGDKIPRKGGPGITKSDLLII
NKIDLAELVGADLGVMDRDAKKMRGNKPFVFSNLKNGTGVEDIVSFIEKQ
GMLTPSK
>Sde_2870 putative transcriptional regulator, CadC
MSFHFNDVEIDTKQYRITCAGLTVSVEPKVFDIIVYLIENRNRLVSRDEL
FEKIWDARAVSDTTLSNHIKSARKALGDDGEQQHTIKTVRGRGYQFIAEV
SVSALTDEPIAASSSAPSERSAPVQSTNRFQPKATIAFLIFGCLCVLTLI
GYLYNLSRTIEPQQPNLSPLNPTLSPPLHAQNTTIPYILVVPFSVSSGEQ
SKWEPFADQTTRELIQYLRKISGIRVVPPPSSFTFKTNKVRAHITNQLPE
VNYIIDGVVKEDGNGNFRISVELENITDNTLVWSNNYDIKVNENNQFKVQ
AEIAASVTASLQVEVLEAERRTLAQVPTSSVTAYELYVQGQYQLGAMTHT
SVLQAITLFSDAIEIDPNFEEAYIAKSDAFRTIMTWFAKPKDLLPKVITS
SIDVIDINPNSARAHSSLGLAYVHA
>Sde_3153 AraC-type DNA-binding domain-containing proteins-like
MFAHLSLRFFLLYLLLKALNFGFEWLLVNPDTPYKAAWLALLMASSFLMA
PCVWLLAREIDRNAPPRLWPIAWGQCAVVLAGFILCIPLFLAANQSVLLV
DPSRAKPHWFNLTHTTMVGAVLLYLVQVPWYLSRSVSLFRERLRINKFLF
SNIDEPALNALRALIWVMAASWLFNLLRMLHTMILEPSQVWNLLISACEI
GVTITALYVIFKRCWQYSVDDQTMVESVSPELKEQASLLQGDKCAKYAKS
SLDQTTRTRVAKKILAQFEEEKIYRKNGLKLQDLCVATNESAHYISQVIN
QELGFSFFDLVNKYRIEEAQQKLKQNRDLPILDIALEVGFNSKPTFNKAF
KLRVGQTPSEFRAK
>Sde_2804 regulatory protein, LysR
MINYKQLYYFWAVAKHGGITRASEQLHLTPQTISGQLSELEKGFEATLFD
RVGRRLELTALGKLAYSYADEIFQVGKELENAITKKNNIRERVFRVGISS
SVPKSIAYKLLSPALEKDPGIHLVCKDNNLEHLFADLALHKTDLVIADKP
LSSDVGIKGYNHLLGECPIAFYATPALAERYRPNFPHSLNNAPLLLPGED
SALRIMLQRWLSQQSINPIVKGEFDDTALMKAFAQEGVGIFPGPTVIDKE
SQKEHGVEMLGEITELKIRYYAISAERKLRHPSVVAISEAAQQNLFAPHQ
AARNIDMDGHQDI