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# Ehrlichia chaffeensis str. Arkansas, Arkansas

>ECH_0763 conserved domain protein
MLTSIKNKYNPYNKVNQPNINLSFTILHKNDTKGTIDQEYGNNITHNTFS
NGLGTTSINLLDKPTIKEEILSQDNNNCYDVTTQQYDTNNITLHSEEISY
EMAYSLLLDLVNNDIELLEEVLLIAKILIKEGVLVAPESKIKKDIAQIVL
HNISKQTTQNSGYSR
>ECH_0001 chromosome partitioning protein, ParB family
MTKRLGKGIFELIGNSTLEINNNISTDTHLTMPINLLNPSTSQPRKTFNQ
ECLKELAESISKHGIIQPIIIRKNPHKKGYEIIAGERRWRASILAKLKSV
PVIVKEISDSQCLELSIIENIQRQDLTPIEEAEAYSNLINTFSYTHEDLA
SIIGKSRSHITNMIRILSLPTSIKSMINDKLISFGHARALINIENPEAIA
EKIISLNLNVRQTELLIKNLQKPHKKKSKENLTELEQSLSEILNLQIKIN
GLKNKGSIVIKYNNTQQLNSILEKLKKVTQT
>ECH_1118 putative transcriptional regulator
MSTHAKNKINKMEDTDEIKAHDPLIAGLIDKNMQKNKFTNKGVNDNHTSK
NFTKEGVESTKDLKNSTTKIRPHPVDECVGKEIKRQRIMRGMSQNQLANK
LGITFQQVQKYEKGTNRIVISRLYQLASVLNVEVRDIMLKLQEDLKNISC
DHTVASTSTLKDNEEKFIPEFHDSKIDSKEVLMMVRAYTCIKNEKVRNII
YNLVKALSLDNKQ
>ECH_1013 DNA-binding protein
MIVTRMRYQMDKMGINARELAHKADVGKSFVYDILSGKSTNPTSKKLMAI
AKVLNVSLSYFISDDNYTYGQNNVNIMPVYDLELENGKVASSGDVNLYLS
SNINLTSNMKNLRVYYVKGDSMIPTLMNQDVVLVDIGDKIPHPAGLFVIV
DSVGVSIRRLEYLKDNQKIKLHVVSDNKKYSSYECHLEDMEILGRIIWYA
RSL
>ECH_1012 DNA-binding response regulator
MRILLIEDDIACAKAVEASLSSEGHFCETMTSAQDCYGSIIPKNDDYDVV
ILDIHFPGKIDGYDILVKLRESGIKVPVLILSCISSVSHKVKGLYYGADD
YVTKPFHKSELLARIKAIVRRTRGHPESIVRVGNIAINLDHKCVECNGEI
VHLTKKEYGMIELLSSRLGTVLTKEMFLSHLYRELDEPSDDKIIDVFMCK
LRKKLKVANNGKNYIETVWGRGYVLKECVDEDESDDRGGYRWDHGGANVD
SIYGQEEDKKYVEEA
>ECH_0628 rrf2/aminotransferase, class V family protein
MSHIANSQSLSEGYLEQIIVKLKKQGLINSTKGPGGGYSLNKSPNSITLN
LILESIGENIKITRCKNHLIGCLSNNARCITHNLWDNIGNHIKKYLNSIS
LEDILNNNFKSGTTVNNNANEYIYADYNSTSTILPTVKSQLDNLSSLNIY
NPSSTHKLGQNTKSIIEKTREIAINQLNAKNHDVIFTSSGTEANNLVINS
TADYKYLISSIEHLSIMNCAINAELIPVDSNGTVCLDTLSDILYKCKDEK
VLVSIMTANNETGVIQPIKEIVEISHKFGAIVHTDAIQACGKIHVDIEDL
GVDLLTISSHKLGSIAGTGILFFNSKKIKIKPMILGGHQEKGLRAGTENV
VSIYLLSISLSNLKDSIKKMSSVERLRDKLENQILNLVPEAQIFGKNTRR
LPNTTCISMPNVNSEIQTISFDIDNIAVGSGSACSSGALEHSHVLAAMGI
DDNVAKNSIRISLSPDVTDDQVNKIVNCWYKIYKNNQLLKLN
>ECH_0163 transcriptional regulator, MerR family
MGEKKILHDEYSSKLKTIGEVAKDLDVEQYVLRFWEEKFPQVNPIKRRGR
RLYSQVDVDTLKHIKHLLYDKGYKIKGVQQELGRKPANINKHTNDTEQSV
YRKDLISLLDDMLSLRDSLLKKFNGM
>ECH_0166 conserved hypothetical protein
MQVDVGSEPDHGYHILFKNNGHVISDFRGVQAENFVFDIKNHNLRASFLV
DPMAPFTELDNSQHPHFVVNMHTANECGSDCVHHNEHDHDAHGRGAASSV
AEGVGSAISQILSLSDSIVVPVLEGNASVSEGDAVVNAVSQEAPAASVSE
GDAVVNAVSQETPAASVSEGDAVVNAVSQETPAASVSEGDAVVNAVSQET
PAASVSEGDAVVNAVSQETPAASVSEGDAVVNAVSQETPAASVSEGDAVV
NAVSQETPATQPQSRDSLLNEEDMAAQFGNRYFYF
>ECH_0185 ATP cone domain protein
MKCPFCNSTDTQVKDSRSIENDMLIRRRRVCLVCHSRFTTTEKLLLRSFM
VVKKNGETELFNKQKLLSSILIATKKRPVSHEGINMMVNNIFYELEGKKE
NAIPTNVIGKMVMDNLFKLDKVAYVRFASVYMNFRNINDFSNIIAKIISE
KTP
>ECH_0298 cold shock protein, CSD family
MSQRLVDDSTYTGYVKWFSSEKGYGFICKDQGNNKIRNIGQDIKDIFVHI
TALQRSKIDGLREGQKVKYQLDKNNGKFSAVNLELLEG
>ECH_0784 putative N utilization substance protein B
MKDNICHTHLWHSKKTTTRFLAIQGTYSMIFNNYTINDIDNLIDYLYEMK
EVLDLIQIDNQLLLKIMNTMLLTFNTINSTIATFLNEKWSIDRINLISLS
IIKTAVCELICSDTDAVIIINEYVNIASHILERTDVNFINAILNQVKFTA
RPVLNKGINFHIEQTESSAIFNST
>ECH_0284 hypothetical protein
MLLCLIIICSQNRNASLVDDQQDPVLYDFEEHCSISSSSCHTQSDSTLSE
GESVDEEQEVDDTMQYLSDCDDFETDSLEIHDDSSSMNQGHCSLGAIPKT
YNPTFMQKKTGWIEESSSREFSDECFSCSDVSDDDMSTKSSMLLDYDCQN
RKSNPNHELVVLRTDNSDVSTVNVSRVMPNGRIRLNSLGGEGDHLTSYTF
GFPLRSSSKLVLSSSNLSFSELIISPTIYAEFGKIDPFCFSYFEKDMLGR
MGGVPSSGVYGIESHACANSLISQDAILGLRTCGKLRKDTVFVVNQGDLI
DMKDHISNVLPSDVKPGISSSREIVGLTSGSECTEENSQRIVQGTGVSVV
EDAVPSGSRMVFASQDVDAMFASSVQIIQDSMDLLSDFCLDEMTDDEVEQ
ITRNMEQSSTSCATVSAMAQMVGASNVSDGANTDVNYLCQEGKDSAGLLL
GEGVSKDKKMTSAASRNVVVVQAEVHEPSTSSSVVRKSRIPIKVGESSRV
VTKKRLDVKQSSLSVTSKSQGLGVRKLQAVAADDRPNLVGYKFKSGDYML
CQSPKSNRADVTKRRVSQSGGSVSVKPYEPGHTRVAAHKESQSSDHVSVK
PCEPRRIVPQVTVALRKKRVVFQDTGKGEAVLGRHGSTQECVEPSSVTRS
SLENVPNVVKHKYEDVCHKDSRHDIALRRSVSSVHQQSSKSARSMATLGK
RSAAAKTGVSVRRTKSDAIDTEKGRDKRWLENEIAIPLENTVSQVVICGT
NETLHDTLSKHFRVLHDSLSQYSKNSDAVVRCKEVYYIAHSRIKHADSII
QEAVDKWALTQRATLWDKHGKKVVTACMKDLEKVFKKIYIDQGKTSLDCQ
AKLQDIRSEVENNVKNQIACLVRDTFLKNACDEIFTEVSSTILHKVSVAH
ESIVKGMRKCSREELEGQVVKSCSIFHKSKLQSKILTHINDLGTFFKKQL
QVKSKEIVKEQLKKCKVDIVPGDIRHCCIDTVINAPVPNTAARYAIHVLN
SRPNVSGLDAGQLSFS
>ECH_0941 putative transcriptional activator, Baf family
MLIAIDIGNTNIKLAICANNKIIKRITISSQSRRTADEYFIYLNSTMNQL
NLDYKNINNIIISSVVPSITKPIIELSQNYFNIDPTILSNHHADIFNIKI
SLQNKVLGSDRLADIIAASSLYPHKDLLIIGMGTATVFNLLNKDKCIYGQ
AIAPGAHILAKSMRQYTALLPEVLISKQDKVIHDNIYHAMESGIYWGYIT
MINGMIEKIIKEEEKDLYIIATGGNSNLFFNHKTAIHNIEVDLTIKGLIQ
LHTVLS
>ECH_0133 greA, transcription elongation factor GreA
MNARFPITKNGFAKLELELESLKHERPKIIKSISEARELGDLSENAEYHA
ARERQGLVESKIMELESKKSRAEVIDVSNLSGDTVMFGATVTMSIYDEQT
GNTDEVVYQIVGEYEADISKQMISIKSPLVVSLLGKKEGDVVEVKTPKGD
YRIYKIIKIEFI
>ECH_0250 mfd, transcription-repair coupling factor
MNNINKIFNIPQTLEPLVIIKMYIKKLIHSAIYIVNQETQLHNLASIFKF
YVPNLEIIIFPAWNSIPYKKNSPHNSVMAERIKTLYSLITRHNDNPYIII
STINAITQKVLHQNIILQSVLKITSLQNITKNHIEDYLTNHGYSQYSIVQ
DIGEFATYNNIIDIFPTTYKNPIRIHLNNNLIQSIHYFNRQTQLIDNNSS
LNEVVIYPTSEIIKQKKNIDIFSKTYKTKPNQDQNLLNTIISGKKHIGEE
NFLPLFYKEELQNIFNYISQNTTLIFNDKLINEIKEYNNQIYLNYRSQLS
YQVPPPQLYVDSEEFKIITKQFHKTIFSQSDNTSNNSAYTDRNIHTSSFN
ITEKIQNVPNFKTLVQNKQIDIFEILTQYIKTTCHTKKLIIACYSTGSLE
YIQNRLRTLNIKLCKIENYQEICSSYNIAILPIYHSFISKYTIVIAEHDL
LYKQETTNKSNISNIISNDTNLDIGDIVIHKDYGIGKIVALETTKVFDSY
HDFIKIEYYNNDKLFLPVENINLISKYGQQNVNVTLDKLGSTSWQQRKTK
IKNHIKKIAKELLTIEAARRLSTGKSFFPDENYKHFCNEFSYTETEDQLQ
AIKDMEHDLSSGKIMNRLICGDVGFGKTEIALRAAFLVASQNYQVAIIVP
TTLLCRQHFIVFTERFKKFPNIKIKQLSKIVARSEIKKTKESLSCGQVHI
IIGTHAILAQDVTFANLSLLIIDEEQQFGVKQKELLKKIKTNVHVISLSA
TPIPRTLYMSLCGIKDLSLIKTPPKNRLAVTTYTTYYEETIIKDAIIREH
NRGGRVFYVCPQISNIKSISDKIRKLVPEIKMNTAHGQLSPTQLDTIMND
FFDGKFTILLTTSIIECGLDIPFANTIIIHNADMFGLAQLYQLKGRVGRS
STKGFAYFILSEKATNKSAIKLEIIQSIDSINSGFNLSLHDMDIRGFGNL
VGEEQSGNIKDIGIELYQQMLEEELNIYSEYPKDLDHINININVNIRIPE
HYIQDIGLRMRVYKKIGSLKTKEDIDNYYIELTNKFGKLPNEVENLLNTI
YIKQLCANIGIYEVEQIKNSILLKIDSNTTLKQKILNYFINNPLTFKIQN
NSILMLINNSSNCIISFIIHHISKINLLNKKAIL
>ECH_0562 nusA, N utilization substance protein A
MVNLQNFDNLELIRVAKDIADQKGLNLDVIIRAIEEAIQLTSRSRYGNCK
IKVTVDKKTGVVATYRQVLVINNNGDISVPEGKENEIDFSDVSKYKLITL
AEAKQIDKNVEVGDIMLEPLPVIDLDYSSAKIAKQKIAQVIISEERKKQY
EDFKDRVGDIVYGTAKRIEYNNVIVDLNGNEGYLSASNLIKGEVFRVGDR
VKAHIEDVRKENSGPQIFLSRINKGFMEQLFKQEIPEIYDGIVTIKAIAR
DPGSRSKVAVFSSDKNIDPVGACVGARGVRIQGIISELHGEKIDVILYSP
ELAKFIVNAIAPAEVLKVIIDEDKEKVELIIPENQLSLAIGRYGQNIRLA
SELVGWKINVIGDETESSRKAKELSAGSKIFVEGLDVEEIIGQLLFTEGF
VSIEDIDQASVSDISAIDGFNEEIAEELKSRAADYLVRKDAEMKQILDNL
SVDKDVTMLPFLRPSDIIALSKNGINSLEDIAGLCTDEFFDIIPDIALTK
DQVDSVILESRKKIGWL
>ECH_0957 nusG, transcription antitermination protein NusG
MKYEWYIIQVSSGSEEKVCQTILENSRVLGLEESFREVFIPYEEITRVKH
NKKVLVKRKLSPGYVFLYMSLHENSMNFIRSIPRVLNFLNNDFGVPKVIS
ENEMESMRKKMCQSVVDDTSVVNFEIGDEVVINDGLFQDFNGKVEYINDD
KKIAGVSVMIFGRLTKIEFKLEHIQKVEG
>ECH_0062 recG, ATP-dependent DNA helicase RecG
MHNLSIFSSMYMLPGVNNVVGSLLKKLCGGDKIIDLLFHIPQSYVDRRTA
LSEDSVGKIVTFIGTVKCHGFIGRKRKSQYKIVLDTCIGEVSLIFFNYSL
KYLRSVLKVGSTCVVSGTLIRFLGCLQITHPDYIVTDIKKFQDISIIEPI
YPLIRGLTSKRISKLVKLSVRLLPDFPEWIDEKLLRDNRWNSWKESLIKI
HHPDTLEAVHLHRARLAYDELLSHQISVKMVRKFDYQQGVSIVSKQLYYN
DILNKLPFKLTEGQKEVISQITKSQASENRMVKLLIGDVGSGKTVVALFA
ILNVIENGGQVAFMAPTEILAEQHYRWIRAILSDISVDVELLTSKVRKKQ
NIKKKLQLGECNVVIGTHALFQDGVDFNNLNLIIIDEQQRFGVLQRMRLI
NKSNMADVLFMTATPIPRTLEQVVYGDIDCLRLKDKPHNRLPIQTSIVNI
ERLFEVIAKLQLALQEGNKAYWICPYIEDSELLDIAAAEKRFFTLQEVFG
KDVGLIHSRLPKIEKDEVMMSFYNGNIKLLVATTVIEVGVDIPDATIIII
ENAEQFGLSQLHQLRGRVGRSDKSSFCILLHGNMLSKIAYKKLCILRKFQ
DGFYIAEQDLLLRGSGDVLGIKQSGLSNFKFADIYKDQGLISIAVEQAGA
ILDANKTELGDHFNQLLHMFGYDVSTINY
>ECH_0994 rho-1, transcription termination factor Rho
MLDLSELKKKTIEDLLKIAEDLGVVSNGRMLKQEIIFHLMKKVVSDGGAA
IGGGVVEILSDGFGFLRSPEANYAASGDDVYISAGQIKKFNLRTGDIVSG
EIRAPSEKERYFTLVKAHSINFTDMAKLQRYVHFDDLIPLYPEERILLEC
NDPISVSKKDISMRVIDIVAPLGKGQRALIVAPPRAGKTIILQQIAHSIS
VNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPGYRHVQLAEIV
IEKAKRMVEHKKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQR
PKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNCEIILD
RKISDKRVYPAIDISKSGTRKEDMLIDSVCLKKVWLLRRLLSSMGSVEAM
EFLRDKLLITKDNNEFFDMMNS
>ECH_0200 rho-2, transcription termination factor Rho
MLDLSELKKKTIEDLLKIAEDLGVVSNGRMLKQEIIFHLMKKVVSDGGAA
IGGGVVEILSDGFGFLRSPEANYAASGDDVYISAGQIKKFNLRTGDIVSG
EIRAPSEKERYFTLVKAHSINFTDMAKLQRYVHFDDLIPLYPEERILLEC
NDPISVSKKDISMRVIDIVAPLGKGQRALIVAPPRAGKTIILQQIAHSIS
VNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEPGYRHVQLAEIV
IEKAKRMVEHKKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQR
PKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNCEIILD
RKISDKRVYPAIDISKSGTRKEDMLIDSVCLKKVWLLRRLLSSMGSVEAM
EFLRDKLLITKDNNEFFDMMNS
>ECH_1054 rnc, ribonuclease III
MIESISKIIKYNFKNPQLLNEALTHPSLVSKDTLKFNYERLEFLGDAVLN
IVISEMLFNIFPKDTEGNLAKKKTALVCGNKLVEVAQSINLGQFIMMSDG
ERACGGINNFRNLENALEALIGAIYLDGGFTAAQDFIYLFWEHSATHMNV
PPQDAKTILQELVQGKRLPAPAYHTIDKSGPDHNPTFTVEVRIPSYQAIQ
ATGHNKKLAEQKAASLMLNQIHNKTK
>ECH_0432 rpoA, DNA-directed RNA polymerase, alpha subunit
MSDHWSKLTKPSSIKVVPSGASPNKADLIIEPLESGFALTLGNALRRVMM
SSLRGFAVYGVEIENVLHEFTSISGVREDVTDILLNISMMRVKLSGMNSK
VLSLKVKGPCEVRSGMIPDTDDCIILNKDLLICTLDQGVDFNIKMYVNAG
KGYVPAVKRKSVNKLGDIPINFIATNALYSPIKKASFKVESSRIGQFTDY
DRLIMSVETDGSILPDEAVALAARILQDQFQPFINFDETDEPHKKVDAKD
TLPYDSNLLRKVDELELSVRSYNCLKNDNITYIGDLVQKTESDMLRTPNF
GRKSLNEINELLASMNLHLGMKIANWPPESIESLSKQYSEE
>ECH_0952 rpoB, DNA-directed RNA polymerase, beta subunit
MSSSVTSTKYVLNSFNSVPRLSYAKSIDIKDSLTDLIKIQRDSYNAFIGI
DQNTESGIKNIFQSMFPIQDLLGRAVLEFVSYSIGEPQYDEYECIKRGIT
FSVPIRIVLRFIVWKVQEVSFKEVKYVVDEETSEKSIKYIKEQEVSIGDL
PTMTSHGTFIINGIERVIVSQMHRSPGVFFDSDKGKTYSSGKLIYSARII
PYRGSWLDFEFDIKDILYFRIDRKRKLPVSLLLRALGLSNNDILDTFYDK
IRYVKSEKGWVVPFVADRFRGVRLSHDLMDSDGNVLVKANTRITLRMARK
LANDGLTKYLVPFNEIQGLFIANDLLDSTGNALIISAGENITSEHINKLE
LFNIEEIFVLNIDFLTVGPYILNTLFLDKNVSYEDALFEIYKVLRSGESP
SLDTIKAFFDGLFFEKERYDLSTVGRIKLNDHLGLNVSEDITVLTKDDII
HVIKKLVLLRDGEGSVDDIDHLGNRRVRSVGEFIENQFRIGILRLERMIM
DYMSSVNFDNAMPCDFVNPKVLATVLKDFFSSSQLSQFMDQTNPLSEVTH
KRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGQNIGLISSLA
IYARINKHGFIESPYRKVDKGVVTDKVEYLLAMQESNYYIADASATLDEN
NQFVDDMLYCRHDGNFVMVKREEVDYIDVSPKQIVSVAASLIPFLENNDA
NRALMGSNMQRQAVPLLKADAPLIGTGMESIVAAGSGTVVLAKRGGIVHR
VDGLYIVIRAFDQEKNEYLGVDIYNLRKFQRSNHNTCINQRPLVKPGDYV
KANDVIADGSAIDQGELALGKNVLVAFMSWQGYNFEDSIVISSEVVKKDV
FTSIHIEEFECVVRDTTLGPEKIMRSVPDINEDSLSHLDDVGIVNVGAEV
SAGDILVGKVTPRPPVSLPPETKLLVTIFGEKVFDCVDSSLYLPLDVEGT
VVDVHVFVRRGVEENDRSLLIKQNEINGFIKERDYEIDVVSEYFYDELKR
VLVSSGVQYNNQNIDDYLASIPKKEWWDINLSDEAMLLQVKDLKEKFDSM
IQNAHSKFDQKIDKLNYGYDLPQGVLCIVKVFVAVKHNLQPGDKMAGRHG
NKGVISRIVPVEDMPYLEDGTPVDIILNSLGVPSRMNVGQILETHLGWAS
VNLGKKIGHILDNLDELTVSHLRNFLYQVYDGQDLKDNIQSMSDEDLLVF
AERLRDGVPMAAPVFEGPKDSQISNLLRLADLDVSGQVDLYDGRIGEKFD
RKVTVGYIYMLKLHHLVDDKIHARSVGPYGLVTQQPLGGKSHFGGQRFGE
MECWALQAYGAAYTLQEMLTVKSDDIVGRVKIYESIIKGDSNFECGIPES
FNVMVKELRSLCLDVALKQDKDFLSNEVKD
>ECH_0951 rpoC, DNA-directed RNA polymerase, beta' subunit
MKMLDLYGYTSIAQSFDKICISIASPESIRAMSYGEIKDISTTNYRTFKV
EKGGLFCPKIFGPVNDDECLCGKYRKKRYRGVVCEKCGVEVTSSKVRRER
MGHIELVSPVAHVWFLKSLPSRIGALLDMPLKLIENILYSGDFVVIDPIA
TPLSKGEVISESAYNQAKDNYGEDSFLALTGAEAIRELLVRLDLHAINAN
LRVELESTTSEMKRKKIVKRLRIVENFINSGNKPEWMILTVIPILPPDLR
PLVSLENGRPAVSDLNHHYRTIINRNNRLGKLLKLNPPAIMIRNEKRMLQ
EAVDALFDSTRRSYVSNKAGSVGYKKSLSDMLKGKQGRFRQNLLGKRVDY
SGRSVIVVGPNLKLHQCGLPKKMALELFKPFICSKLKMYGIVPTVKLANK
MIQNEKPEVWDILDEVIHEHPILLNRAPTLHRLGIQAFDPVLIEGKAIQL
HPLVCSAFNADFDGDQMAVHIPLSLEAQLEARILMMSTNNILSPSNGKPI
IVPSKDIVLGIYYLTLQDQVQSEDEILFFGDFSHVEYALHNKDVHLCSQI
KYRMTYCNYDTSDGKPSYYSKIIETTPGRLILWQIFPQHKNLTFDLINQV
LTVKEITSIVDLVYRSCGQSETVEFSDKLMSLGFKYASQSGISFGCKDMI
IPDTKTMHVDNASEKIKEFAVQYQDGLITRSERYNKVIDEWSKCTDLIAK
DMMKAISVYDVESKLNSIYMMAHSGARGSASQMKQLAGMRGLMAKPSGEI
IETPIISNFREGLNVFEYFNSTHGARKGLADTALKTANSGYLTRRLVDVA
QDCIVVEYDCKTHNGFAIRSVVEGGTVVETLDNIILGRVAAVDVYNPITE
ELLVKAGELIDEAKVEKIKIAGLDAVKVRSPLTCEAKKGICALCYGRDLA
IGDVVSIGEAVGVIAAQSVGEPGTQLTMRTFHVGGTAMRGVETSNLIALL
DAKVKLVNSNIVEDKHGNKIVMSRSCEVVLLDSVGNEKMRHNVPYGARLY
VDDGQLVKITEKIAEWDPYTMPIITEKTGIIKYMDLIDGVSINEVLDEST
GISNRVVVDWKLHLQGANLRPRLVLIDDNDNIITLSNGLEANYFIPIGAV
LNVQDGQKVHAGDVITRIPRDSIKTRDITGGLPRVIELFEARRPKEHAIV
SDIDGYVEFGKDYYRSKRRIFIKPVSDTLSPVEYLVPKGKHTIVNEGDFV
HKGDLLMDGDPDPHDILRVLGVEALANYMISEIQQVYRLQGVRIDNKHIE
IILRQMLQKVEIFEPGDTMYLVGENIDMEEVIKTNDNMVKMGKSPAKYAP
ILQGITRASLDTNSFVSAASFQETTKVLTEAAFSGKEDSLYGLKENVIVG
RLIPAGTGFLMNKIKKLSLLNKEDYSMYYNNEYQDSALLQNDNNAFNQEL
HKDTGNIVDY
>ECH_0760 rpoD, RNA polymerase sigma factor RpoD
MKDLQTDKELLRTLVSKGLKQGFVTFNDINDVFSDYVLSSDNIDETISML
QDSGINVLEQSDEDEANSIIEENRIKDEMDEDDVSDTSIKSWDFGQTDDP
IRMYLCEMSSVELLSREGEIEIAKKIKSEKVNMLRSLVESPIVLRTFMSW
RDDLVNEQIMLRDLIDLDANYRYEFPEKFSDTDDASVLGYDKDLMDEPDE
DPDIPEDEDEENISINASILEMENALLPKVVSILDSVIASAEKILELKKQ
YQGKINQDIEKQYNDLHDSIWEMIYQIKLSNSAVLSITQQIYSLSKSIAA
EEAKIISLAESYGIQRKDFLDAYNTNSVLQKKGTSPQWDNMLLNEESNIV
SMYSKIKLLSGENNLTEFKALVTKIQKHERAANQAKQEMIKANLRLVVSI
AKKYSNRGLQFLDLVQEGNIGLMKAVDKFDYKRGYKFSTYATWWVRQAIT
RAIADQARTIRIPVHMIETVNKINRTLRQMLHEMGREPTLEELSARLNIN
VDKIRKVMKIVKDPVSLESPIGDDDSSTFGDCIEDKRAVKPEDAAVLADL
REITTKVLSTLTPKEERILRMRFGIGKGGKDHTLEEVGKLFNVTRERIRQ
IEAKALRKLRHPSRARKLRGFF
>ECH_0655 rpoH, RNA polymerase sigma-32 factor
MLTNSIFSLTQDNLMSYINEVHAFPILSPEEEDRLARNWYENGIVADAHR
LVTSHLRLVVKVALSFKNYELPLIELIMEGNIGLMQAVKKFNPTLGFRLS
TYAIWWIKAFIKDYILKSWSCIKIGTTQAQRKLFFSLRKIKKKLFKYNHN
ITKEDIKLIANKCSTSEQEVEQMNRYFLYRDRSLNELVFSNDNQNGVELQ
EIIKCDTPNQEDTYLLNEELNIKKALISQALSTLNERYRDIFIRRRLIEE
PDTLDKLSQEYNISKERVRQIEMHAFTKVKNFIISEREKLGHCNINS
>ECH_0796 rpoZ, DNA-directed RNA polymerase, omega subunit
MARLTVEECMGRTNNKFKLVILASQRAHDLNSGACPVIKYKNGKNTVIAL
KEIAAKQLDVSSLFNLSVQRCRKYMEKFINSDEPYIAHKPKNNVDIFQAS
AVAGNSDGLENSSNSRDDNPLGRDNFFSTPENRNNTNS