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# Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808

>RSP_3316 Hypothetical protein
MNDAARELIEMRPAGGFDVILADPPWRFASNSEAKPGRNAIRHYRCMKVG
EIEALPVKAIAAPDALCLMWVTVPFAERAFRVLRAWGFAYGSQLVWRAMP
SCSTSPGLAARIAAAVRGRLKFESRFSAILSTPQLNPHSCGTVWDGMGLL
VKENACEIRRCGVPCRPM
>RSP_3514 transcriptional regulator, AraC family
MKPAAARRHELSIALILQDKFTIAAFSGFIDALRLAADDAAKSRQIRVAW
KVFAQHRSPVMASCGLRVATEDGLPVPEDYDYIAICGGNSFADAAPAPQL
AQLIQRAHRARVGLLGICTGSFAIARAGLIGDRRFCIHWNVAEPFKALFP
RAQISVDRIFIDEGDVITCAGSTAAIDLALYLVMRHCGQDRAQQVMRHMM
LSQMRPATMPQAHFYQLPPGDSHPRLRRALHFMEQQLDHPPSVGAIARYC
GVSVRQLERIFLQALGQTPNAAFRQMRLNYGRYLLSAGTLPVTEIAHIAG
FSDAAHFSREFRRAFHETPSAHRRARSHGPDAGS
>RSP_3339 transcriptional regulator, GntR family
MEMRGSMTEDAAALAGGGNDTVAGRLALAIHEHRIQPGTKLAEDELGEIF
GVSRTLVRAALQQLAHERLVTLRRNRGAFVAQPSVREAREVFEARALLEP
RTARSAAERATAADIARLQRHIDEEHAALDAGDPGRALRLSGQFHIEVAV
IADQDTIRDFVAQLVARSSLIIALYWQRRTALCESHAHHALLRALADGDG
ARAEEMMKGHLLDLVSSLDLRNPAPPARSLREALDRI
>RSP_3088 two component transcriptional regulator, winged helix family
MRILLVEDDPGLGGAIRDQISAEGHAADWMTGVEDALASVATTAYDLVLL
DLNLPDGSGLDFLRGLRARKETMPVIILTARDRVTERIAGLNAGADDYMV
KPFDLSELSARIGAVSRRYAGNPSPRLALGPLEVDIADRRIDGPEGEVTL
SQREWAIFEALVKRPGSVVSKTQLEETLYAFDAEVESNTIEVYVSRLRKK
LGRDRIETRRGMGYRLVRE
>RSP_3731 transcriptional regulator, DeoR family
MSSLMCHGGGLPEVRVARPSGRAERIAALGELCRAGSIVHIGEAARQIGA
SEITIRRDLSVGAGGLVCLGGYVMRASEGAEGYSLTAAEASEAGAKEALA
VRAAALIEPGDTVFLDCGTTTPYLAARVPQNARVTVVTQALNIAETVARL
TGVNLILLAGIYHPETASFSSEEAVAMLGRINITKGFFSAAGVHETEGVT
CFHFHEVPVKRAALARSRQPYLVCDGSKWGRLRPATYARLEEFEGWIGAP
DRAA
>RSP_3241 Two-component transcriptional regulator, winged helix family
MKILLAEDDRQTADYLRQGLLAEGYSVDHVPDGRDALVQATLQPYDLLVV
DRMMPGLDGLSLVKALRSAQIKAPILILTAMGGVTDRVEGLQAGADDYLV
KPFAFSELSARLAALARRPALAEGARDLLRVGDLTLDTVRRTVSRGGTEI
DLQPREFRLLEHLMRAAGRVQTRTMLLEAVWDFHFDPGTSVVETHMSRLR
AKIDRPFDKPLLHTVRGAGYMLKA
>RSP_3464 transcriptional regulator, LysR-family
MIGGRTAPEISLRLLEIFAAMMRAGTTVEAAEMLGVSQPAVSAGLKQLET
QLGIVLFERASRRMMPTAEARELFAEIRPMFSMLRSFTQTARDIREGLSG
RLRIISTPPIGHTLAPRALVEFLRERPGVSVAFDVRRLEHVIDAVQSGSA
DLGLALSMDRYTALNSEVLHETHMVALVDAAGPLAAQTQVTAEDLAAHPF
VGIEGDSKLGGLVRSAFLQSGLGYLPQIEVRYVSTAAELVNHGLGNAVVD
PFTAHYHARPGIAIRPFVPACMTRVVLLTRRGVPRSQLAHAFAATLKPIF
AEPLRRIHA
>RSP_3475 Serine/Threonine protein kinase
MIGEQPGDIFRRGEILNHTYEIEGVLGRGGTGEIYRARNLISGRIVAVKA
LNRRFSGNDDYIGLMRREEQLRDVIDDAVVRYTECSRSDGGHVFLVMDHI
EGPSLAQAMEAGRIEARDLLIVAHRVAEGLRAAHRHGIVHRDLSPDNIIL
RGGAPERATIIDFGIAKDLSAGAQTIVGNDFAGKYEYAAPEQIDGRAEPR
SDLYALGATLLAAFRGEAPFAGATPGEIVRRKGRPLDTEGVPEPLRGLID
RLAAPEAERRPASAAAVVEELDRLLRPQAEPDRRRRVWPALAALLLLAVL
AVGGWIALRPPLAEPYRLTASAADLAGEAPDRAAAARIAAAYARAAGHES
HGLRIARGAPEGWADAAAEVLALAATLDDWRLALNGAEAALSGRAPDARS
AAMVETRFRDWASRRGFEPRLQIEVVPPPLDPQAVSALLQRHADCGPLSE
GGTEGVITGAVATAETAAALERALADLRGDRPLHLAITVLNPAICAVRQA
LPDRPAQGLSIWLGEAATGAPNLAGIYGPGDYPLVEIRLPAGMSGLALWV
GLVDVTGSVLNLLPNVYSDESRIDRLGTVANGVRTIRVMPLEFQVAGGTQ
LFALQVEARDFGRSELVAVVSRGDLFALRRPKDESVASFTEALSALRRDD
PDRLVAVTRRLLESRPSR
>RSP_6195 Hypothetical protein
MAKAKPYIGDDDEVRELDDPFFANARRGRPPKPSEQKKVRMNLMIDPELA
SRLDGMPNKSAFVNEALRKALAS
>RSP_3029 transcriptional regulator, GntR family
MFQTESAGAERARAPSLTARAYEAIRHRILTCQMPPGLTFTEADLLAEME
MSKTPIREALLRLQVEGLVETIPRRGYVVSVLHVADIGEIFDVRAMVEGT
CAEVAAQRATPEDLERIVSLAQRSSAAYDRVVDPDLRLLREQAVLNNAFH
EAIAIATGNARLHRIAVQIIREYERFFFLEWRSELRYPPDHKDHAEIGRL
IAAGDAAGARGAMVAHVEGARATLLAAVAGSAR
>RSP_3680 transcriptional regulator, TetR family
MEERDSETGWRGSREGWLQAAYEALIEGGVESVKIMTLAARLKLSRTSFY
WFFKDRADVLDALRSQWAGTTTAPLVAASAEYAESRAEAMLNVLACFLSG
RFDARFEFAARSWGLQDPAMAAAVEAADAERLAALTDMLARWGHDPQEAD
VRARTVYLVQIGYISMRAEETLETRLARIPNYVEIYTGVRPEPREMARFR
ARLGLAV
>RSP_3694 Putative transcription activator
MAERLTDRILAENADPFAAMVNHRFVRDIEADRLPAAVFDRYLLIEGAFV
ETAIAIFGYAVAKATDMGDRRKLIGSLDALANEQMPYFEAAFARRGIAPD
PALQADPKVAAFREGMLAIARDGDFGGIVTSMFAAEWMYWTWCSAVASAP
MSDPMVRDWIEMHAAPGFAAQAHWLRDRLDALGETMTPAERDAAVRTFGH
VQRLEIDFHEAAYPPAAISAA
>RSP_3418 transcriptional regulator, AraC family
MAEMAQVVGLSESWFTRLFRDTTGVTPLQWQLRQRVELAQTLLEENLSVA
EIADRLGFSDQAHLTRVFRQVTGQPPGAWRRARLCAAPPESGAARRA
>RSP_3700 transcriptional regulator, LacI family
MVEKGKPEPGSRNAARRTTIYDLAALAETSASAVSAVLNGTWKKRRISER
LAERILRVAEEQGYSVNLQASVLRREKSNIVGMIMPKYDNRYFGAIAERF
EARARAQGLFPVITCTQRDPELEFEAAREMISYQVECLIATGATDPDRIS
DFCAAAGVQAINLDLPGGRAPSVVSDNFGGARDLAHLLLERAPHEALLFI
GGRPSDHNTAERIRGFRAAHADRGIPLPESAILACGYAAEKAEAALEARA
GDLPRGLFVNSTITLEGVVRWLRRQSPPAPVEIGTFDWDPFAALLPDCVG
MVEQDVAGMLEEVFRLIGHAPDAGLRIEVPTILRRHL
>RSP_3226 Silent information regulator protein, Sir2
MDSIFILTGAGISAESGLGTFRDKDGLWTRYDLSRVATPEGFRADPALVH
DFYNMRRKNCLDAAPNAAHAALARLGRDHPGEVTLVTQNVDDLHERAGST
GVIHMHGELRRALCAACGHRWPAPERMRSEDACPSCGRPATRPDIVWFGE
MPYRMDEILERLARATLFVVIGSSGEVYPAAGFVDEAAAQGIPTLEINLE
PSGRRGLFDRGLYGPATEVVPRWVAGLLRD
>RSP_3317 transcriptional regulator, TetR family
MTEEKPKIGRPPVLSCAERTCQILRAAEQVFVCHGYSGTTMDRIACAAGM
SKRTLYQHFPDKLAVLQGILRAYDAGPLMESLTDPDPPGSAREILHRSLV
EILRFLLCPAQVALTRLAVSEATAAPEVARLFYDNAMGGLSAAFTRRIAG
LAAQGRIRCSDADWLGSSLVGCALNRQLLRRLTHPEAGPPDVAELERRVS
ALLDLVGPSLGFAD
>RSP_3324 transcriptional regulator, LuxR family
MKSHYQVGQEAIRINRTAFGMGLPVGGHFYADMVQKGYFMTKHWELSTPS
DRRPAMVHLAAADAIAEVGEALQGRQTLAEALASLVRSVGAECGMIVRSR
PDGTQQRVAVHDERRGEPVRPLVSAYAAGQFGAALDRARPGSLWLGSSAA
GDGALADWQGARRMREFAVLMLAASSSGRDHVELHFRRALSAELLAAVEA
VLPALAQAWARRQAGIVSRAISTHRTRANLTAGRPILSEANPAQLSRAEF
RVCLLLSRGLSVEGVAAELRLARSTVRSHLRSIYSKTGTSALAELVFRLH
EAGDPEPKAGTRQL
>RSP_3511 two component transcriptional regulator, winged helix family family
MRALVVEDDARIAQDLSVALGSAGFRVETAADGETAWFLGGTEGYDLIVL
DLGLPKLDGLAVLKRWRAEGVEIPVLVLTARGTWTERVEGIDAGADDYLP
KPFRIEELVARARALVRRSTGRAAPLQSVGRLALDMNRMTATLDGLPLGL
APLEFRLLAYLMLHRDRVVPPTELLEHLYGDNDAREANALEAVVARLRRK
VGRGVIGTRRGFGYQLEAGP
>RSP_3546 conserved hypothetical protein
MFLCHAWDDRQGSAKELHDLLEARGVRVWFSEKDLGLGVPMMRAIDKGLV
NSRVGIVLVTPAMLRRLPAEGIADKELSALLRRERLVPVVHGTTYEELEK
VSLLLASRAGLSTAEESMAEVAAKIAELVAI
>RSP_3024 transcriptional regulator, IclR family/MhpR
MSPEPNGDAVSIILETEGPMTAAPKTVRSVERTLQILELMNRAAVVRVQY
LAEQIGLPAPTVVRLLETLVAAGYVRKIGRQAGYCVTEKVAALGAGHHGL
PQVFDVAREAAEDLTRRTLWPTALATLDVDALVIRFSTIPMSPLSHYQST
INRRMTLLDYAHGRAYLGFCPTEERQHLVALLQQTAGSVEEARAIGERAQ
SVVALTRASGFGERTGNIQPETHSLALPLRMGAKLVGTLGITYFAKAKVD
VSALKSDLRAAAEACTSGTAYRAPASSG
>RSP_3606 Sigma54-2 (RNA polymerase sigma-54 factor)
MKSRQRISIAQTQRLQLNLGLTASIRVLNSDAEGLTRYLQEQAAENPHIQ
LEPATSTDWLPRWTSVLSRLAQGEGSAGGETVAAAGPSLMAHVMARIDTL
YPRGPERRIAILLAEALEPTGWLGTGPDEIARQARVPSAEVEAVLAGLQK
IEPAGLFARTLAECLRLQAIEAERLDSTLSCLLDHLDLVAEGALGRLARL
CNTDEAGVTARLRLLRTFDPKPGAQFDPGAAPVREPDLIATKGEAGWEVS
LNRSAMPTVQIRKPDKRPTTPAARAAWTQAQAVGRMIENRNATLLRVARE
ILARQEAALDEGPSALVALTMTEVAEALGIHESTVSRVVAGTCVDTPRGT
WWLRRMFSGRLAEGGPSAAAIRAAIARLVAQEDPAAPLSDGALVEALAAE
DMQLARRTVAKYREMLNIPPGHRRRRRPSRSA
>RSP_3586 Putative aromatic pathway regulator
MIRFRDARREDVAAILALLADDALGAQRETAPLETYLAAFDRMAAAPGML
LIVGEQEGRVVATYQLAILPGLSLRAATRALVEAVRVASDLRSQGIGADL
MADAEARARAAGATLIQLTTHRSRKRAHRFYERLGFTASHIGYKRALD
>RSP_3298 transcriptional regulator, LysR family
MGNFTWDDLQFFLAVARSGQLSRAARQLRTSHVTVSRRIDRLEAALRMRL
FERNPRGYELTPVGRRLIETAERMEAETERMQVELLGDGPGQRGVLRMAV
PEGFGSWFSRVLLGPFTERFPNIALELITLPQIMSLSRREADLTVTLDPP
KASTYHSERIMDYTLHIYAAKSYLAQRPEIQTRDDLLKHPFIGYIEEMIF
APGLDYLGEVHPGIRANFKSSSIFNQLAATQNGLGLCVLPFYIGRRVPDL
EMILPQEVVLRRTYWLTCHRDVRPLPRERSVMAFLLEAGRTHGRSILNSG
ATRKGDGSTTFVQ
>RSP_3055 transcriptional regulator, MarR family
MSLTSRPIPFQNDPDPSMGLNRAWFNLLRVQRSLMPKVARRLKAEGVEDV
VWYEILLELERAEPSGLAMAEIERRLLVAQYALSRHVARIEARGWIARRR
APGQGRGQILSLTPAGRGLHDRIWQIYREAIHEELGARLSHEEGYALAAL
LIRLYP
>RSP_3436 transcriptional regulator, LysR-family
MDIRFLESFVAVADCGSIAEAARRLNLTPAALSQRLRTLEQDLGHSLVMR
AGRRVRPTASGLAVLDHARALIEGARDLRAIAAQDEPAGQLRLGAIATSL
TGLLPGIVARLRARHPRIEYHIRPDSSVNLYHGVIAGDLDAAVIVRPQFP
VPKSTGWLTLREEPLVLLVPEEAPGTDPLAILQSHPFIRYDRNQWGGQIV
DRYLRQNTLKVREWLELDALDAIAGLVSRGLGVAIVPDWAPPWPEGLRLR
KIALPDAGGRQTGVLWNLSGARIAAMQAFVEACRARGAPAPGP
>RSP_3124 transcriptional regulator, LysR family
MDLTDELRAFVATAKTGSFTAAADQLGVSNRLTSKYVAELEKRLGVRLLQ
RTTRKVGLTPSGETLLARAPALLDELDDLLVEVSHGSRGFTGTIRVSAPV
TFGEDYVGGMLGRFAALHPGLVVDLRLNDSFADLASEGIDVAFRVGRSET
LSLKTRKLGEVRTVPAASPGYIATRGAPDRPEDLVRHDCILDTNRRVPRR
WTFLEDGTERSVEIRGRFQVNSARAAADLAMAGLGICYAPRFALAEALRS
GRLVPVLEAFGGAVVPVSAVYLEGRSLPQKVRALIDFALEDIRQSGVL
>RSP_3165 transcriptional regulator, GntR family
MTSAAEKAPPEARNLSEQAHDRIRRDILRGELFPGVKLHIEGISERYGIG
IAPVREALNRLSSEGLVERKSQRGFFVAGISMAGLEELVKTRIWLETLAL
RESIAQGDVAWEENLVLAYHRLARTNRRVPDASGRDLAEEWEHLHKAFHM
LLLERCGSSWLLGFCSTMMDQAVRYRSLSMKVHPNVQRREGAAAEHAAIL
AAAIDRKTDLACELLTEHYRATLEALRGVVGGDETAPAAGTGREAG
>RSP_3094 Putative transmembrane anti-sigma factor
MHEPVTELDLVAYVDDQLDPWRRVAVERHLATDPEAAARVMADLQARDEL
RLAFAEPLPHEAPETRAAARRLARGLGLDRMLVRLAPMAAVLVLGGMIGA
GVAGLGPLRVPQVVASEPPPEFIQAALEAHEAGRLRLSMQSQPAMPRLDA
AEIRAKTGILLPGLPGDWQVQDVQIFPSPQGPSVEMALETPELGRLSLFA
VRPGSFRVALPDEMQASGLEVAWFQIGEVAHVLVAEAAPPDALREAAEGL
SRTLY
>RSP_3203 transcriptional regulator, AraC family
MPTHAPLVPPGAAYYPVQSAGDTRSYAFLLVPGFTLLAFSSAVEPLRIAN
QLSQKPLYRWRVLSEGGRPVASSSGITVAADEALGPLDRETDLMVCAGNI
PSAAAGSAVVATVQRHHRFGGTVGGICTGAFALAHAGVLEDRRFTLHWEN
QPGFLEDFPRLVPTSNRFESAGRTLTCGGGAASTDMMLSLIARDHGADFA
AMVSDMCLRTVLAGAAPEQRSSLAALMRSRSPALIAVVKLMNEHLEDTLS
LEELSDAAGCSRRHVERLFKATVGETPNGFYRGLRLDRGRNLLSTTDMTL
LEVATACGFNSVSHFSKCFKARFGTVPTRFSHRSRSPSRMARA
>RSP_3022 transcriptional regulator, TetR family
MGYRTAGNGRRAEIGAARRAKSRNTIMAAAFDCYGRENGRFVRIEDICKS
AGVARGTFYNHFGDLEALRYQLLEELTGEFDRAVHHMFGALENAAEQSAV
AIRYYLHAAEKNRAWGWAMIHSSAPGHTFGEMVWHNSLVTIRRGVDEGLF
HIPTAEIGRDILMGAVASAMVSVTSGTTSSDYPEQISEHVLMAFGMSRSA
ARDVSRRPLPALPAIAHDTIVIASMPALGDISD
>RSP_3309 transcriptional regulator, AraC family
MTQALHIRSYSGAGTLHDHDHAQLVLQMAGTLEIEVGGHGARLSQAVSAV
IAPGEPHAQQGCGLNRSLVLDLPAAALPEGALDRRFLPVPEAARRLVEFA
DLSAATGTLPERVGGPLLRLLLDSLWQNARPCPFAPLEAAIRAEPALDWT
VDRMARIAGMSRSALYRALAEARGTTPARLVTATRIALAQGALRQPGRSL
AELAAELGFSDQAALTRAMRRETGRTPGAWRALWGTPGP
>RSP_1414 conserved hypothetical protein
MQQETEIREALARVAAGDAPILRGFAVWLLDNLSAVAFNSTRSLAALAGT
NPNTVTRLAREIGFDGYDSFRSAVQEVVQRRNIRYGERAEALRHRSEADI
WGEALTANLGNIETLFSAEGMDLLESCVEPLLAARRVHTIGVRSCFGLAH
YFSYVGGRAFANFIEVPVTPGAILDQVASATPEDIVVAITYEHYSAEVVR
ACHVARSCGARILALTDSHSAPVAEGAWKVVRLPMAGPQILPSLTAAYIA
LELLLSAMAARSPDAAARLLGFEARMERFGGYVRHR
>RSP_3676 transcriptional regulator, GntR family
MGVGEAFGAGPQRSRSAQVEHALRREIVLGTLPPGGVLRELDLAQRFAVA
QGTIREALMRLSEEGLVQRRARRDTHVTEAHSDDVVELLRIRHDIECRAA
IRVIEANDPRLRRDLDMLLQAMRLAALQEDEYALLEQDCRFHLRLFEAAA
MPVVEPVLMRCLLHTQRFKILNSAANSRELLATADRHVSILEALETRSAE
ALMRALSHHIATIVDFGPEVMPTLAPEAGQGMATPALKVHP
>RSP_3026 Transcriptional regulator, MocR family
MWRPHLVDTARLKYLGIVDALEADIRAGRVTPGERLPPQRAIAEALGVDL
TTVTRALNEAQRRGLVSAQVGRGTFVRDEPAGDEGGGTPLDLSMNIPPQP
AEPDLRRILPQGIASILTSPRGTLAMHYQESTGAPADRTAAASWLAGRVA
GASADRIVVTSGAQAALFALCALLLGRGDVVAAGAVTYPGLKAVAAQQHL
ELAPVAMDEQGILPEAFEAVCRERAPKLLYLIPSIDNPTTATLPADRRRE
VAAVARRHGVLLIEDDPYAPLRSERLPALAELAPELTWHIATLSKCSTPA
LRIAYVLAPNAAAAVRLATVLRSSVLMAPPIFAALATRWITDGTLTALAS
AIRAENRQRQSSAASIFSGLDFAADPDGHHLWLHLPQRWRAAEFADHAER
AGLAIVPASAFAVSPHPAEAVRISLGIAPDRGMLEEGLTQLSGLLTQPAV
GSRAVV
>RSP_3609 ParB-like nuclease
MAKDFISRGDLRLIPLAELRLSPLNSRQEIAAEEVEAMAESLAVAGLLQN
LIGHLTPTGVEIVGGGTRLRALQRLAAEGWSRHEDLIPIDPVPVKVTADL
QEAVAWAGTENSARSALHPADEVRAYAAMRERGASLSRIARSFARSEAHV
ERRLKLADLPAEALAALRANEISLEMAKALTLAPSGERCLEVLGSVRGRD
VRPEQVRRELTPGTVPSTDRRAVFVGLEAYLAAGGTSQRDLFADRTLLED
EALLDRLFAEKGAAEAERIRAEEGWEWATWVPEEYVSWTVTQKLVRLYAR
PGKLSDGEEAELAALEEREADDTLDEPGRARLAELEARREGGFTDAQRAS
AGIFVYCSSRDGLSVERAYQQPRAVPRGAAELAPDLPQSLIEDLHRIRLG
ALQARLMDQSELMLDLLAWSLGGGLRPWARPLAISPTDQPIVPEKGEGTS
YPPRLAARLEPNASLGPDGTPAEFEAFRAQGKKHRNQILTEALARTFCTG
SSGLSAALARQLGVEVRRIWTPTAQGFLGRCSAGYLDRLWNELVPAAEAE
PAHQSFNKLKKGEKAKRLEALFADPDTREALGLSREDCAKIDAWVPAELG
WPEGEE
>RSP_3385 transcriptional regulator, LysR family
MAEGDLSFFVMLARRESFSATAQDLGLSASAVSRRLARLEDRLGVRLLNR
TTRKVSLTSEGEAYYGAALRLLDEIADLEHNLSQGRDRPAGLLRINATLG
FGRTHLAPAIARFRRIHPAVEVQLLLTDAPLNLVEEGIDLGIRFGAPPFG
RMVMRLLQRNRRFLCAAPSYLEARGVPQSLTDLQQHSCIVLRQDHDAYDV
WRFDDIGEASPSAKVSGELSTNDGEIALAWVLDGQGIMLRSEWDIAQHVR
EGRLRLLLPHYRQTANIHAIYPERHNLSAKVRVFADHLAAHVRDADARMP
LQLAAAELRAATARA
>RSP_3768 hypothetical protein
MMKSKYVAAVSLMILLAACAKQPDRIAAVEVGGDNYSRHNCRQLASERMA
ISQDLANLSAKQKSAANGDAWGVFLLGLPLSSMSGGDQEAMIAIAKGKIQ
AIDRQVVAKGCPVSRPLTQD
>RSP_3052 transcriptional regulator, LysR family
MADPFRTLAWDDFRLVKAVAAAGGLTGAAAALGIAHSTAFRRLGQIEERL
GTLLFERHRTGYAATPAGEEMVALAERVDGDIAAFTRRLAGQEIQPAGEL
RVTTSEALLVHLLTPIFAAFQRKCPEVRLDVVIADAALNLSKRDADVAIR
ATDTPPEALVGRRAARIGWALYGPRGAEAPVPWVSLNESFAALPVVKAER
ARVPAERVVYRLNSLSGLAEAIAAGIGQGHLPCFIGDKREDLVRLSAPLP
ELAADLWLLTHRELRHSARVRVFLDFVAADLRTRKPFIEGEA
>RSP_1422 ParB-like nuclease
MAKRRRLEAPSAEELEELETGFARETSTSTRPPIAQVAADAASLAMPMPT
AERAAAAKDSADATRLRQAEAEGLLLLEIPLAEIRADDLTRDRLKIDGEE
MDELRASIRAHGLRLPVEVFERPEGQGERYGLISGWRRLWALRSLHAETG
DGRFARVRALVRRPTDVSAAYVAMVEENEIRSDLSPYERGRIAALAAGQG
AFGSVEEAVDVLFGAASKAKRSKIRSFALIHEELGDLLGFATTLGERPGL
RLAHALRLGYAGALREALAAGQGGDAEAEWLLMEPLVKAAEGTVADPSRG
GRPPRKQVPVAATVQIERSGDGPGYLLRLEGDDVDEALAQRVAQELRKLL
ASGRVSPAKPG
>RSP_3528 transcriptional regulator, TetR family
MTEPKPRARRSGAAPARTRDDQVVDRRRSLLKAAVKVISKRGLTGVTINS
IAAEAKCSYGVVAFHFQSKEGIIFAALDHTAAEYEAYLAQLNASQRGPAE
RIRHMIDTDFSRKAAGHESIALWLAFWAEAARVPSFRQRCAALRVQYNEA
VAADVAELAALRGRTVEAEQVALTLNAMISGLWVENLLLPITIAEGQKRG
HDASLAYLRLIFPDDF
>RSP_3814 hypothetical protein
MKRDARDAPKSITLGFEADCVTLPIDAILPLRALGKSAKSSRKYRQIAAS
IAQIGIVEPPVVVRNPDRSATWLLLDGHMRIEALKDAGGSEVECLVSTDD
EAFTYNRQISRLAPIQEHKMIRKAIERGVPEEKIALALDLNMSSIRRKAR
LLDGICEEAVAILKDKPCTNAVFDALRKMRTMRQIEAAELLVNANNYSVA
YVNAILAGTPQAQLVESSKPKKVKGITPDAMARMEQELARLQEGIASIQD
TYGEDHLHLTVIKGYVGKLLGNARVVRYLAQNHPEFLGEFQTITEITPAE
ADAAE
>RSP_3620 Cold-shock DNA-binding protein
MANGTVKWFNATKGFGFIAPAHGSKDVFVHVTALERAGIRQLNDGQALTY
DMETDRNGRESATNLVLA
>RSP_3095 sigma24
MRETDEILAELTPLRRYARSLTRDEAEAEDLVQEALLRAHERRASFRRGK
GLRVWLMSILHNLFIDALRSRRARERREAAAMEAAPLSHPASQESAVRLA
QIREAFARLPEEQRSALHLVAIEGLSYAEAAEVLGVPQGTLMSRIGRARA
ALRAFENGEAARQPLRVVGGRDADDA
>RSP_3771 conserved hypothetical protein
MERSWGMGHFPHMQKKTLDAFVRGLQIVMEAEGIKMKPLSVAAGMGESGV
RDLIRNESSPKVANAYALARELGRTVDEIIQIGMTGDLNARPAHAPIAVA
GCVGAGARVDLLDAYEKGDGMYHVARPPQLKPHGIVAVEVKGESMMPLYR
PGSVLFYTRAAAEGVPVEALNTPCVCEDADGRAWLKVVKVGSQEGTFSLL
SLNPDADNMHGVRLKWAAPVLLTLSPDYVERVYV
>RSP_3064 transcriptional regulator, DeoR family
MHVSPDLPRARRTLIAERLRAGQPVVAAALAEEFGVSEDSIRRDLRSLAQ
EGLCQRVYGGALPLSPASTPIGARLGEEAARKHALARCAVDLIRPDQTLF
LDAGSTLVPLAGLLPEGQGLRVVTNSIPAAAALIGRSGIALVLIGGGVTM
SVGGAVDAQALSELARLRIDLCFLGACALSPEEGLAGFEMDDVAFKRQLL
RQSRTSVLMMTNGKLGTQAPFAIARADEIGHYILEADAPAEMELRLRRTG
ATVLRAAPPA
>RSP_3109 transcriptional regulator, MarR family
MHLMSKEPAAPFSMTPLIRDRCLCLGAQRAARTLARHFDEAFRPFGLRSG
QFSLLVALNRPEPPAMAEVAEVLAVDRTTLTAALKPLERRGLLQVRPDAG
DRRLRRLALTEAGRGLLGRAIPVWEETMAALERGIGRDPSDLAAGLEALR
RAAV
>RSP_3433 transcriptionalregulator, CopG family
MIRTTITLDEELAAEIDAHVARSAVPNRSEAIRDLVRRGLAAGPAKPADT
LCIGVISCAMEQTLPELSRRVREARLARHDEIRFVTSVPLNHRETIDLIV
LQASVSRIEDLAARLSLERGVRHATVGLIPIEEEVQIHAHDDEEPHSHSH
LRVQQNF
>RSP_3445 transcriptional regulator, GntR family
MSSETLSHSAYRRLREDILEGRIAPNTILTERELAERLGISRTPLRSALS
VLEREQVIERMVNGTLLVRLVSVEQLLDIIQLRLILERAAARRAAGFGLT
PELEAAREAQLRYLGAGAMDFESFWQDDGIFHRAVALAAGLTLLPGLLAE
QRAIVRRSTIIRTHTNFADQAREHIAVIDAIAGRDAEAAAAAMALHFDRM
RARTLGWLNKD
>RSP_3505 transcriptional regulator, DeoR family
MAEQTRSDFDEALMARVAWLYYNDGLTQNEVGEILNISRIKVSRLLDQGR
SSGLIQVRINSRQQGCLELETRMKREFGLTDCRVIPESPVEDVNLRVGQA
AAQYLMQKLAFGETISVGWGETVTHSIRMLGHTAQERSIGLYSLTGGVQT
YVEGMREANWHRNVNIIPAPLVVSTPELARALMQEPAIAALMARALEADY
KLVGIGGLGESATVVTQGYISAGEIDPLRRGGARGDILCRFYDRRGQDIG
VPLHERVVGVDLDQLRRSERVIGAAGGPAKTGPILSALRGEILDILITDE
PTALALLDAAEA
>RSP_3134 Serine/threonine protein kinase
MTAMASELQPGDVIQDTYRVEARLGQGGMGTTWRGVNLTTQDVVAIKVMT
PEIALVPKAVELFRREAQLLRKVQSDAVIRYETTLQDREGRLYLIMEFVD
GQPLSHYLERGARLAPGDVLRLGRRMAGALAAIHALGIVHRDVAPDNIML
PDGDIGHCKLIDFGLASNTSGTEASIIGASYAGKYSYSSPEQFGLHGARV
GPASDIYSLGLVLMKVCGLKVPGEGMGMAAVEVRRENVTIPRDAGLPPAL
ARLLEAMLRTRPDERPADLQKLFAEAAPGLERAAPARTPRRSGLALAAGA
GVLAAAGAGLWFALPYLDTPPGSRVVTDARAVVAAHDPLAEIESRFAAGD
VETAFASLMALANDQAGPPETRRQAYFALGRMYDPASFNASRSPFKAPNA
SAARRNYQAAADLGSAEARQALVLLRE
>RSP_3665 transcriptional regulator, LuxR family
MSLLAVTANAVGSISRAESRNELSQALKDAVVGLGFQTYSLAYQRPHALE
AVTAPHLTTWPCEQDGASDPASARIRDPLLDYAVTGIKPLIWRSGSWKSL
RKDRYFPCPHSFEARAGLIVPLPDRRGRIGAITMLSAQREDYPEEIAEAG
RIVALAVLVRAGSLLPAAAAVSPALAGLAKLSPRQIEILDWIAHGKSNSE
IALILGLSRRNVTYHVSEILKKLDVTSRTQAVGIYTGR
>RSP_3621 Cold-shock DNA-binding protein
MANKTGEITMANGTVKWFNATKGFGFIAPTGGSKDVFVHVTALERAGIRQ
LDDGQAVSFDLERDRNGRESATNLVLA
>RSP_6165 transcriptional regulator, LysR family
MSIRMLRTLIAVSEHGTFSAAAESVFLTHAAVSQQMQKLEEDFGIRLFDR
SRRSPELTPLGQAFVSRARDVVAAYDGLALAVTGEGSVEGTIRLGAVPTT
LIGLIPVAVTLLKRDFPALSVTIVPGLTTNLLQQVERGSLDAAVLTRPHV
VPRRMVWNHVADEPLELLASHDTASDDPLELLATQPFIRFSRQAVVGGLI
EAWLQQRRIEVRESMELESLETISSMVLANLGVSIAPRPCVDHINPLPLK
HIPLDAGGLRRQLGLSSRADNARPRVLRILHEKLVQAVGIGVLDPSSL
>RSP_3686 transcriptional regulator, LacI family
MANLQDVARAANVSKTTVSRYLNGSLELPARTAEAIDTAIRTLNYSPNPH
ARRLSLGRSDTIALVVPDIATPFFATFVAAVEAEADARGLSLALHATLNR
PDRELKYLDHIRQGHADGLIFITNHAGSRALAEKVNSGGPCVVVDEDIAE
ARVPKLFCDNAEGGRLAGRRLARAGHRHVLFIGGVDQMISGARRYAGFLE
GMREIAGPDVRIERSCGPYTFEAGRAAAQAFVARGPDRPTAIFATSDELT
IGLYEVLREAGLSIPRDVSVVGFDDVGPLHLFAPAVTAVRQPVRDLGRRA
LELLLAPPPVDPERLPPEELLPVTLIERESVAPPVGQTRRNTNSED
>RSP_3129 serine/threonine protein kinase
MTEPRLPNGTRIAGHVITDQIGRGGFGITYRANVLETGATVALKEYFPCD
MAHRDAQGFVRPLPRAERMYEEGLRAFITEANILKALPQQAGLVRVRGAF
EKFGTAYCAMDFIEGEPLSRLAQATLQRTGFIAEDLLRSFLAPICLALET
VHSTNLVHRDVKPANIMISRRDQQPILIDFGAARPSGQRGSLAMFTRSYA
PVELFPRAQVRSAQPLEEGPWSDIYSLSVMLYEMATRQLPPSAPDRAAAV
AAGAPDPYVPLTALLAQRRLRGSYSPAFASAVDAGCALWPEARPRTVRQF
AYMAGVEMGSAPPPTPRRTVTGAAPSPSSSVPRSQRRPVNRQSIAMVLLM
LLIAGAAVSYGVVSRQPDWVAYR
>RSP_3448 transcriptional regulator, GntR-family
MFMSAPRPLAHEAYQRIISMIFEGALKSGDLLQEAALGEVFGMSRTPVRE
AIKRLESEGLAVVEGRFTCVRSVTAADVEEVFFLRLELEPLAARSAVRLP
PAQVDAMEERVRLLMASDPAVNDLQRQTDYEFHHLLGREFGNQAVAQTVA
TLHRRTCIFDHTQVPERFLRGCEEHLEILEAVRSGNADAVEAGLRAHLEH
ARDAVLLRLRRAAAATASASAS
>RSP_3400 transcriptional regulator, LysR family
MNLRFIETFLWVARLGSFRAAAERLNTTQAAVSNRIATLEAALGQDLFER
MPGGVRLSPIGQRAIAPAEDLMRSAMEFRISVGRPEQLRSTVRIGTIDSI
VQAWLPRFIERVRELYPGLTLDLNVDTSRGIAREIVERKIDLALLMGPVL
EAGLRNVDLGSMDCAWVAAPGFGLGGRRIGLADLVDLPILTFSRNSDPHV
WLMRQFEELRLPQPAISNSNSLSAMLRLALEGVGVALMTRPVVEAALASG
ALDLLDVDPPFPPLALHAVFADHGDNLLPVALSEVAAQVALEERGR
>RSP_3202 transcriptional regulator, AraC family
MDGSRLDRLKRLTREQWDRHGRQGPLEGLRISCETAPTGPIHTVYDPSFC
VVLQGAKTSRLGDRAFRYDAGKCLIASLEVPIRAEITEAAPGAPYLAFAL
TLDPATVADLILGQGSLPMEPGMPSPALAVHPLTEELIGPLERLLALPAR
PQDIPVLAPMIRREIVWRLLTGPQGAALRQIGLADSRMSRIGRAIAWIRD
HFAEPLSIERLSGLAGMSPATFHRHFKAATAMTPVQFQKSLRLQEARRLL
LSDGADVARVGFAIGYESPSQFSREYRRLFGAPPGRDGAQIRREIRAPAS
LRL
>RSP_3664 transcriptional regulator, GntR family
MPAHQLSDDRAIQGTFMRKRRDSLASVVARDLAGRIERGDYAVGDKIPIE
AQLCEMYNVSRTVVREAIATLRSEGLVTSRHGVGVFVEERGNPALSITRE
AAGELSEVLELLELRLGVEVEAAGLAARRATAEDLRQIREVLEKTDDLEA
FAEHRRELDYAFHLAIARASGNSWMPKFMDFIGPVIIPRSQLLHDPQSGI
TGDYLRQMVEEHRQIVEAIAAGEAAAAQEAMRMHLSTSLERYRRRLTDA
>RSP_3430 transcriptional regulator, winged helix family
MMRILIVEDDPVLADGLQVGLRLAGFVPEAVGTLEDARAALDAGRFEAMV
LDLMLPDGSGLELLAELRAAREAVPVLVLTARDRLDDRVRGLDLGADDYL
GKPFELEELAARLRALGRRPAALATTRPEWNGVALDLAAMEASRDGRPVA
LSPREFAVLRALMAHPRAILSKAQIEEQLYGWQEEIESNAIEVHVHKLRA
KLGHGFIETVRGVGYRLAEAS
>RSP_3125 transcriptional regulator, ArsR familyy
MEKTHALGVLSALAHDIRLDVFRLLVRAGPAGMAAGEIAAGLDIRANTLS
NNLTILTGAGLVRSEREGRSIRYFARMETMRGLLAFLMEDCCGGRPELCQ
PVLDRIACDC
>RSP_3341 Protein of unknown function UPF0074
MRLTKFSDYALRVLLYAASIEDGRLVTIGETASIYGISQGHLKKVVMNLI
HAGFLQGTRGRTGGFRLARPASEIRLGEVLRATETDFALVECFQQGNACC
ISRPCRLPPILAKAVSSFMDTLDEFTIADVMMAPTQFGLEDPLEA
>RSP_3322 acoR, acetoin transcriptional regulator, sigma54 specific, AcoR
MEHELSHVREIEAAAEGRPPGRDRVVVESWLRCLNQHRLDPTARSEAFIL
PETALREHRQRSEALIAIARSGIESLYGLVAGQNYVLLLADRAGVTVEYL
GDEAQKQELRRSGLYMGAEWSEARAGTCALGACIETGEPLVIHQSDHFDA
THTGLSCTAAPIYDTLGRLSAVLDISLLSSPRAKASQSLALKLVTAAARR
IEMANLMAENRREWVLRLSASPDFLDVDPEAALSLDGTGRVLGLTHGAAR
ILAQAAGQDWRAAGGLIGRPVSDFLNVRVDRLDDLMRQRPAAERFIETRD
GHRLFAHAIEPRRAPARTVPAPVSLPPPLRGLAGDDPTMAALLRAAAALA
PQRLPILIEGETGTGKLTLARAIHAAGRGGPFTVVRCAEIGEEEALLFGR
QTGRRQEEGLIAAAHRGTLVLDKIEDLPPRTQARLLRLVAEGSYLPVGGL
RPVPVDVRILSTALPGGAEGLRPDLLHRLGGAWLRLPPLRARQDRLWLAE
RLLGSGDRPLSLAPEALAVLASHLWPGNLRELEHMAQTLRALVPGAEVGL
ADLPETIRAGTASGPGVPQAAGAVLAQVLRQTGGNVSEAARRLGVNRSTI
HRQIRRMGVTR
>RSP_3748 ampR, transcriptional regulator, LysR family
MPDRPDIPLNALRTFEVAARQGSFTRAAVELRVTQAAVSHQIARLEDMLG
VILFQRTPGGLMLTDAGQALFPVMERGLDDIARMLDRVAAGQAGEVLNIG
VVTTFAAGWLIPRQQAFGRAHPGITLRLSTHNNRVEIAREGLDAAIRFGD
GQWPGLEAHHIMDAPMTPFCAPDLGLRVPSDLHRHTLLRSYRADEWPAWF
AQTGESCPSLTGPILDSSIGLADLASERFGIALLPAPMFERHVRAGRLTR
PFATTVTLGSYWLTVPKERRMTSASRALLDWMRDVLRQPRAPE
>RSP_3045 dorR, DMSO/TMAO-two component transcriptional regulator, winged helix family
MKKNYHMLVVEDDPVSRQTLAMYLRKENHEVSEARDGEQMRRVFAKGDVD
VVMLDINMPGEDGLSILRELRRQSEVGIIMVTSRKEDVDRIVALELGADD
YVTKPYNMREILPRAKNLARRVAALRLVRPDQPATTFDGWTLDAAHWALT
DPAGNHVKLTRAEFELLATFVAHPGQVLTRDQLMNHVGRRGHETFDRTID
VLVRRIRRKIEADPSDPRLIVTVHGIGYVFQA
>RSP_3042 dorX, DMSO reductase regulatory protein DorX
MSSPAMPEVSAAALVGAVIDAIGTEGFCPALTAWLQTVAPYSFTVVFGYR
GEAKPIDLYDDFPSHRRKVFVTDYLEGPYLLDPFCQGAIRPVEPGFHRLR
SLAPDRFYQGEYFRSYYMRTEIAEEIGCFAEMPGDCHVVFSLMREEKPFS
APEFRKLTGVAPIVTALMRRHWADLSREFATRSTPRPALTGDGLDRLTPR
EREITGWILKGYSAEATGQELGIASGTVRIHRRNIYAKLGISSQRELFAR
FLAGISP
>RSP_3405 gntR, transcriptional regulator, GntR family
MAHLKQSTRMPLADKVYHTLYTRISNGDYPPNQKLPPEMQLAEELGVSRP
VLRAALERLRDEGIVHSRQGAGNYVRPIQIAPLGFARVETLADIQRCYEF
RITIETDATWLAAQRRNPAILAEIEAALEQLRAATGSMQHREDADFAFHV
GIARGANNQYYEATLRALRNHINVGMKLHGDALMTDGQKGLEGVLREHAG
IFEAVRDGRADEARDQMRAHLEHSRDRLFGGSLLDLRMR
>RSP_3580 gvpJ, Gas vesicle protein GVPa
MSFQMQSPLQQDSLADVLERILDKGIVIAGDISISLVGIELLTIRLRLLV
ATVDKAREMGINWWESDPRLCITQAPASDGSAALLDRLERIETQIGQLAA
AREG
>RSP_3813 parB, ParB-like nuclease
MPDDMGPTGQKQVTLIPTERIRVLNPRVRNRRTFEAMVENIARIGLKRPI
TVAPRAGTDPQEYDLVCGQGRLEAFIELKQDHIPAIVIEADESDCLVMSL
VENCARRQHNPIDLMREIGALRQRGYNDRQIGEKIGVSTEYVNMIAGLLE
KGEERLVSAVETGVLPLNLAIEISKTDAKGAQKALMDAYTQNKLRGRKLA
LVRRLIQQRELRGPQLHSNPLGRKPPKRALTSEGLVRAYQQEATRQKLLI
KKAELTQSRLMFVREAFRKLRADGHFMTLLRAEGLETMPADLARSRTEGA
PT
>RSP_3684 solR, transcriptional regulator, LuxR family
MGRQHGLLAPQSAAQRNEKMKRGTLSALTDQEPLFRDLAPAGCYVALRVG
FLAPEDECNFFPSSWIRHYTVQAFGLRDPLIRWAASANGAARWSAVHLPD
EAGVLAAYRRHGLRFGCVIGLPARTARSRKRSFGLFARNDREMTNHEIAT
LRATLAELHAPNRDALTPSQAEVLRMLSEGVRYKEIAHRLGITEGAVKAR
FKAACDRLGARTAVQAANIAQRRGLL