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# Rhodobacter sphaeroides 2.4.1, 2.4.1; ATCC BAA-808

>RSP_0418 conserved hypothetical protein
MRDGTVDFETEEEERPLGPALWRGWNRVCPRCGSGPMLRGYLTVRDNCPV
CGESLHHQRADDGPAYLTILIVGHLMAPVILWAFVEFRPDPAILATIFGI
GTVALSLFLLPRLKGAMVALQWAKRMHGFGSGSGRG
>RSP_1405 ROK family protein
MLIAFDIGGSRIRAARAFAPDDLEPLGERPMPLSFPGFVAALRDLMPEEA
TSLAIAIAGVVDPDTGRITAANLPAVNRRALAADLGAALGRPVWIGNDAD
CFVLTEALLGVGRGHRSVFGIILGSGVGGGIVLDGRLLTGAGGIAGEWGH
APVLDQRPLGRDLPHLPCGCGQSGCVDTYGSARGIERLHLALCGQRLDSR
EILAAWRAGEMAAAETVEVWLELVAGPLAMLVNVIGPSVVPVGGGLSNDG
DLVAALDRAVRHRLLRPASETLLRPAFHPEPGLVGAALAGLQALG
>RSP_0402 transcriptional regulator, TetR family
MARTAGSHAETTGPRVRAAAQRLIARHGYAAVSMRQIAAEVGVQAGALYL
YTPDKQTLLFDLMRLHMEELLAACEALPEPCDPRAALAQFARFHIGYHID
RPEAVFIAYMELRNLSPENFAVIEGLRRRYEERLEAILRAGTAVGVFALP
DLRLATRAIIAMLTGVTHWFRDMGPMGRDEVADQYAEMVLKTASAR
>RSP_2011 putative transcription elongation factor
MSRAFVKEDGPDNTPLPDLPISPHPNLVTPRGLADLQARLLATQARLRAL
RAREDRLDRLPEAAAERDIRYLEARIASAILVDPAAQPLDEVAFGLAVTV
EDEAGRRTVWEITGEDEAQATARRIAPQAPLARALMGARLGEKVVWTRPA
GEVTLTVTGIARPE
>RSP_6209 hypothetical protein
MSIRAGCRHSGRAFGVWAFYTKPMALRIKQLREARGWTQEVLAARSGMSR
SQLAMIERETRPANTIRLNAIAGALGVSTEDLFESNPRERALLELIRLLP
SEDVEALIRVAEGLAAKSQA
>RSP_1378 hypothetical protein
MTCMIMALRPVDRVRQDAEPIAAMYREMGTKAAEQIVNRAFAELAMTIAA
LSHQVRMRDRAEIPRRLRRLQRMCENLGMVSLGLVAADARGAVELGDMTA
FAAIWARLLRVAERSLASDKELLDLSL
>RSP_2533 Putative transcriptional regulator
MLLAIDCGNTNTVFSIWDGTQFLATWRIATDHKRTADEYHVWLSTLLSLT
KIEARISEAVISSTVPRVVFNLRVLCNRYYDCRPLVVGKPECRLPVAPRV
DQGTTVGPDRLVNTVAGFHLHGGNLIVVDFGTATTFDVVDADGAYIGGVI
APGVNLSLEALHMAAAALPHVDVTKPQQAIGTNTVACIQSGVYWGYIGLV
EGIVRQIRLERDSPMKVIATGGLAPLFDQGFNLFDRVEDDLTMQGLVLIH
QYNKDLE
>RSP_0607 sigma 24
MSPDVYLQIFETRRPQLLRLAYRMLGSHAEAEDVVQEAWIRWQAADQAQI
AIPAAWLNRVVSRLCLDLMRSARHRRESYIGPWLPEPLIEEEDADHRPDN
LTLSLMMALERLSPLERAAFLLHDVFGQSFDEVALALDRSPSAARQLAVR
ARAHVHIDRPRYKVEREAAEGLTRAFFEACKTGDAAVLSGLLAEDAVLHS
DGGGKVYNLLNVIVGAQKLLRMFTSLSRKRGDEMEFVQFTLIDALPGYVW
RMGDQIQTTALEVEDGRITRVYTTRNPDKLTRIRLN
>RSP_0014 transcriptional regulator, TetR family
MSKRGYHHGNLRQALVEAALTLITEKGPQGFTLSEAAKAADVTPAAVYRH
FAGRDDLIAEAARQGYEIFGALMAYAYDEGRPSALAAFEATGRAYLAFAR
KYPGHYMAMFESGLSLQSRPDLAAAAGQAHDVLERAAVRLSEHIPPAKRP
PPAMFSAHIWALSHGVVELFTRGAPGARSPFPAEELLEAGIGIYLRGLGL
LPPDA
>RSP_1704 Probable transcription antitermination protein NusG
MAKRWYSVSVLSNFEKKVAEQIRTAVADAGLEEEIDEVLVPTEEVIEVRR
GKKVTSERRFMPGYVLVHMEMSNRGYHLISSINRVTGFLGPQGKPMPMRD
SEVNTILNRVEEGEAQPRSLIRYDIGETVKVTDGPFEGFSGMVEDVDEEH
SRLKVTVSIFGRATPVELEFTQVAKGA
>RSP_0415 sigma-24
MDMPFDALSDVSDEALLVLYANGDSAAARALTLRMAPRALAVATRVLSDR
AEAEDVTQEAMLRLWRIAPDWRQGEARVSTWLYRVVCNLCTDRLRGRQRR
ASSALDDAPEVADAAPGVEEALIEGDRMRALDAALAALPERQRQAVVLRH
IEGLSNPEIAEVMQIGVEAVESLTARGKRALAALLSGQRAELGYGEG
>RSP_1272 sigma24
MTQTPKAPAKHRDPRDELPEHLPALRAFAISLTRNVAVADDLVQDTIVKA
WTNFDKFTEGTNLRAWLFTILRNTFYSDKRKHRREVPDPEGVHAASLFVK
PAHDGHLAFSDFSAAFDQLSPEHREVLILVGASGFAYEDAAQMMGVAVGT
VKSRANRARARLAELLGLEKGEEIFSGVDGQTLAVMSRSGMTAA
>RSP_1785 Putative transcriptional regulatory protein
MTVSIKDVARAAGVAPSTVSRALGKGPVSAEVRAQVEAAVRATGYQPNLS
ARRLRSQVPATVGLVLADIRNPFFTRLSFGVEDAAYRAGLRVFLCNTDED
PAREAMHLEMMAGERVSGLILAPTRELRPEALRRLQMPVVLVDRDPEGAG
CDAVTLDNEGAMRTLVDHVVASGRQRIAGLFGANSFTGEARARGFVAALA
RHGLAALVHRAPPNAVAGYAALADWLEAERPEALIVSNGLFLEAAVRFCH
DRGLVIPRDLAVAGVDDDPWTGIVNPGLTVLRQPAETMGREALTLLLARL
EMPDRPRRKLVLESELVPRDSTAPRLLSRDEPAA
>RSP_1441 regulatory protein, GntR family
MTRKPLTLTGSALAVLRALVERGPSTRPQLGQDLGLSRPTMSAAMAELME
AGLVEPIGSVQGGMGRRAVEYRVATHAGHVIAVDAGSTHIRLRLSTLDRR
LLHASLHPLPNSQYSLTPQISSVVADAVAEALEKTEVDWGPLLAMVIAIP
TRVVGPEGDTAATDQEVIFTNFTPPPQVDCTLVNNVNCAAVAEYHYGAAR
GHQTFAFLQVGVKIGLGLMLNGQILPGVNGAAGEIGHITFPFAPGLTPVP
GEAERYIGTEAFMARVRADWPKGSGRPPADTYELLARAGEGDAAALRHVE
GHAAEIGAVIAICVSVIDPGLVVLGGGYGASPLLRPKVEEVVRHLAFPAE
ITTSTLAAEATVLGAERLAVDRAVSVLLGLPA
>RSP_1663 putative transcriptional regulator, LacI family
MAKEPSSALQRRPLTLRDVSDASGVSEMTVSRVLRNRGDVSGATRERVLA
AARELGYVPNRIAGALASQRVNLVAVIIPSLSNMVFPEVLTGVSEVLEDT
GLQPVVGVTNYSPEREEKVLYEMLSWRPSGIIIAGLERSHAARAMLENAG
IPIVEIMDVDGTPVDNAVGISHRRAGRHMAEAIVAAGYRRIGFLGTMMPY
DHRARKRLEGFESALIAAGLTVEDREFYSGGSALLKGREMTETILSRSPD
LDFLYYSNDLIGAGGLLWCLNHAIEVPEKVGLAGFNGVELVQGLPCHLAT
MDACRLEIGRKAAEIVAGKRADGAMSGLVIELEPKLEPGDTIRRR
>RSP_6026 putative acetyltransferase
MVSVPTIRALSAADAPRLADLATAYRRAMSGPAEATTPGQAAALIERALR
APDLLLLGADCGGALAGFALAFELPEIISGGRAGQLDDLFVMPEARGSGL
ARALIRQLTEIGTARGWTHLRWLVPQDNATAIHLYRSIADPAPWDSFRID
LSRCADEGPSARNRRPAASVEKR
>RSP_1890 Transcriptional regulator, LysR family
MLLTSIIRSRDMPRNLDLTALRSFVAVADAGGVTRAAGFLNLTQSAVSMQ
IKRLEETLDLALLDRSARRVALTAAGEQLLGYARWMLALNDEVFGRLTHD
DFEGEVVLGVPHDIVYPAIPQVLQRFSAEFPRMRVTLLSSYTRKLKSQFA
RGECDVIMTTEDTVEPGGETLVELPLVWVGAPGGQAWKQRPLRLAFEPNC
IFRMGVQSALDAAGIPWTMAVESDSSRTIEASVSADLAVHVSLAGAEPRY
MERIPHGGTLPDLETSKVNLYVADPVHSPAVEGMAELIRRAYAAQAAGAA
APRPLAPVEGAAGEGPRFALRA
>RSP_2888 Transcriptional regulator
MRLTTRTNLAMRTLMFCAINEGRVVRKAEVAAACNASENHLAQVIHGLAQ
KGFLRTVRGRCGGLALGRPAEKIVVGDVFRTFESNLPFTECFSKKENKCP
LTPSCRLKCALNDALAAFYGTLDKLSLRDMVQENTELEDLLKVA
>RSP_1139 transcriptional regulator, MarR family
MSQGAPGPGGGESLLFLTDEQLRKGIEAMFFAYRGFTADPDRILEDLDYG
RAHHRAMHFIHRSPGTTVNNLLSILGATKQSLNRVLRTLIEDGLVESRIG
RVDKRERHLYLTPKGTELERTLSDAQRARMRAAYRSAGPAVVQGFRQVLE
AMMDPELRRQYQTLKEGGA
>RSP_1660 putative ParB-like nuclease
MAKDFISRGDLRLIPLAELRLSPLNSRQEIAAEEVEAMAESLAVAGLLQN
LIGHLTPQGIEIVGGGTRLRALQRLAAEGWSRHADLIPIDPVPVKVTADL
QEAVAWAGTENSARSALHPADEVRAYAAMRERGASLSRIARSFARSEAHV
ERRLKLADLPAEALAALRANEISLEMAKALTFAPSGERCLEVLASVRGRD
VRPEQVRRELTPGTVPSTDRRAVFVGLEAYLAAGGTSQRDLFADRTLLED
EALLDRLFAEKGAAEAERIRAEEGWEWATWVPEEYVSWTVTQKLVRLYAR
PGKLSEGEEAELAALEEREADDTLDEPGRARLAELEARREGGFTDAQRAS
AGIFVYCSSRDGLSVERAYQQPRRFRAARPSWHPTCRSR
>RSP_2362 transcriptional regulator, GntR family
MEDGDSAEAFRAFAAGVALQREDPSPLWVQLKNRIEHAILDGTLPENARL
PSEQAMCSMFDLSRPVIRNALQALAGEGRVIKQPRKGMFVAPRAPELAFM
TSALGVFDDLSAKGYKVTVKTYEFGLHPANEDERRVFKLPEGFQVIRALR
VYHANETPLTHTLISLPAHRLPGFEKLDMEGRSIFGTIRELYGLTVARAD
RWLKGAIVPPEVAARMGVPPGGAMIAIESVAYDHDGNALEYYRAYYNSEV
APIHVATDAH
>RSP_0172 Predicted transcriptional regulators
MPMTALTGSRVRERRLQLGLRQADLARAAGISASYLNLIEHNRRRIGDEV
LARLARALKVEAQTLLAGAEGVLVEDLRAAAASAGDDQPELDRVEDFVGR
FPGWARMLAAQHRRMGLLERTVNALNDRLTHDTHLSQALHEVLSAVSAVR
STAAILAETEDIEPDWRARFHANIHADSERLAVGAEALVAYLDAASEDEE
QGVVAPQEEVEGWLAARDWHLAELEEPGGRARLEAEIEGLASAAGRAMAR
DWVLRAEADARAMPLDPFRAALRAEGDPVLVARRFGVGVLAAFRRIATLP
GAIAGLVICDGSGTLVFRKPPEGFLLPRFGAACPLWPLFEALAHPMRPVE
AVVEPAARTRRRFRARAFCEPHHPQGFAGPELREAGMLIEPAVPDPALVP
RAVGTSCRICPRAGCPARREPSILLEGS
>RSP_2079 conserved hypothetical protein
MAKDFIFRGDLRLIPLAELRLSPLNSRQEIAAEEVEAMAESLAVAGLLQN
LIGHLTPQGVEIVGGGTRLRALQRLAAEGWSRHPDLIPIDPVPVKVTADL
QEAVAWAGTENSARSALHPADEVRAYAAMRDRGASLSRIARSFARSEAHV
ERRLKLADLPAEALAALRANEISLEMAKALTLAPSGERCLEVLGSVRGRD
MRPEQVRRELTPGTVPSTDRRVLFVGLEAYLAAGGTSQRDLFADRTLLED
EALLDRLFAEKGAAEAERIRAEEGWEWATWVPEEYVSWTVTQKLVRLYAR
PGKLSDGEEAELAAFEEREADDTLDEAGRARLAELEARREGGFTDAQRAS
AGIFVYCSSRDGLSVERAYQQPRAVPRGAAEAAPDLPQSLIEDLHRIRLG
ALQARLMDQSELMLDLLAWSLGGGLRPWARPLAISPTDQPIVPEKGEGTS
YPPRLAARMEPNTSLGPDGTPAEFEAFRAQGKKHRNQILTEALARTFCTG
SSGLSATLARQLGVEVRRIWTPTAQGFLGRCSASYLDRLWGELVPAAEAD
QSFQKLKKGEKAKRLEALFADPATREALGLSREDCAKIDAWVPAELGWPE
GDK
>RSP_0616 transcriptional regulator, AraC family
MTRPFTLTRLRKPRGESLPDHSHGAAQLTFAASGMVQVRTEDGVWLVPPQ
LAAWIPPGAPHRLDILTDADLWMIFWEPSAMACWMPGTFPARAFVSRVSP
LLRSLLDAATAADPASERVELMVRLILHELTATEEAPTFLPRPTSAEARR
VADLALADRRNELDLDTLARRAATSVRTASRRFPEETGMTLKAWRQRARI
LWAMTQLGQGQPIARVARDAGFASTAAFSHAFRQVTTVTPSAFLSPP
>RSP_6137 transcriptional regulator, TetR family
MPAETPPARKGRKMPQVLEGARTIFLRDGFEGASVDDIARAAGVSKATLY
SYFPDKRLLFLEVAKAECLRQSEEAVALITADLAPRAVLTLAATRIVAFV
LSDFGIRTYRICVAEADRFPELGHEFYESGPALVRQRIVDYLAQAVGRGE
LAIDDLELAADQFAELCKADLFNRIVFGVGNSVSEAERQKVAQGAVEMFL
ARYAPRP
>RSP_0394 conserved hypothetical protein
MRCPFCGNIDTQVKDSRPAEDHVSIRRRRFCPACGGRFTTYERVQLRDLV
VIKSSGKREDFDRTKLERSIRIAMQKRPIEPERIDQMISGIVRRLESLGD
TDIPSKVIGEIVMESLARIDTVAYVRFASVYKNFQAADDFDKFVSELRPS
APAEE
>RSP_2939 Predicted transcriptional regulator containing the HTH domain
MNERPEKSLFEAPVMAEQERMVEAILFASADPVTVAELQARLPHGCDPAE
ALTHLRRRYEGRGVQLARVGDAWAFRTAADLGFLMRKETVEQKKLSRAAI
ETLAIVAYHQPVTRAEIEEIRGVAVSRGTIDQLLELEWIRFGRRRMTPGR
PVTFVVTESFLDHFGLESARDLPGIKELRAAGLLDNRPLPGSTKTPDEDE
PVTGQSELFED
>RSP_0999 conserved hypothetical protein
MDLSGSLLIAMPSMADPRFERSLVLICAHSPDGAMGLVVNKPVEDLSFAG
MLEQLNIPRAPNGRDIRVHLGGPMERGRGFVLHSPDYMSVGATMLVSGKF
GMTATVDILEALARGQGPSSALMALGYSGWGPGQLEAEVQRNDWLTAEAP
SELVFSDDDPGKWTGMLRHMGIDPLTLSSTAGHA
>RSP_0171 Response regulator receiver protein
MTAHVLLIEDEPNIAEAIRFILMRDGLKVSTHAGGADAIEVVRTAQPDLL
ILDVMLPGMSGFDILSALRADPQTEDLPVLMLSAKGQVRDRAAAKKAGVD
AFMSKPFSNAEMLASVRALVPR
>RSP_1871 Transcriptional regulator, GntR family
MQKDAYTLILEAIEGGTYKPGDRLVESELAERLGVSRTPVREALQRLETQ
SMLTRDGRSLIVASLDHNQLAELYAVRTELEGLAARLAARHATEEEIRVL
RGMVEDDRALLGGDPRALSRANKRFHKQIHLASHNRFLVQQLDLVHRSMA
LMATTSFAAEGRDEVAMAEHEQIVQAIEARDGEAAYAALRNHISKAFETR
LRVDAGELRMR
>RSP_0958 RAM domain protein
MRCVFVQFRCMPGKTYEVADAIYDREVVSELYSTSGDYDLIAKVYVPADQ
DVGRFLSENLFDIPGIQRTLTTMTFKAF
>RSP_2236 transcriptional regulator, MarR family
MEKDTDRLGLLLHDATRAVRKRFEQRTSHLGLSTAQWRLLAQLSREPRAT
QARLADLLDIEPISVSRLIDRMEQGGWVRREADPCDRRARLVAPTDKTKA
AYATIKTIADEVYDEALEGIPADRRRELVAMLRTIVTNLNDAEAEPRVPC
IKANG
>RSP_1485 ATP-dependent RNA helicase
MTQTDIAAPLAAALAAKGYESLTPVQEAVLAEGVAGRDALVSAQTGSGKT
VAFGIAIADQILQGADRLLFADTPIALAIAPTRELALQVARELGWLYGEA
GAHIATCVGGMDYRTERRALDRGAHIVVGTPGRLRDHIERGSLDLSGLRA
VVLDEADEMLDLGFREDLEFILGSAPEERRTLMFSATVPKEIEALAKEFQ
QDAVRIQTAGERKQHADIEYRALTVSARDKEHAIFNVLRFYEAPSAIVFC
KTRLAVNHLLARMGNRGFQVVALSGELSQQERTHALQALRDGRARVCIAT
DVAARGIDLPGLELVIHADLPTNSETLLHRSGRTGRAGSKGVSVLIAAPS
EVRKAQRLLTGAKLVADWGKPPSADEVQERDDARLLEHPVLGQDLSDEMP
LAEKLLERFGPAQMSAAFVRLWREGRSAPEVLQDLAPPEPSQRAPRERGE
FGEAVWYAVAVGHTGRAEARWLLPQDLRGGRRDQERDRRHPRPAGADLRP
DREGGRWEVRRRARDRGGRGHGAPRRRAHAGAPRTRAAQAVRRARPPRPG
RGAPAREGALPAQALALRRGRSGRGPWRLDPGRPPRAGAPAAPRGRRAVR
EA
>RSP_0613 conserved hypothetical protein
MNFRTGQPSDAAALAAISIEVWLGTYMRKGVSAFFAEYALNEFTSTKMAS
LLKDPNEHVIVSENEGGIDAFIRLGQGRAAPVSGCSTLEIATLYVQPRHH
RRGLGRALLEQGLAYARQASAPSVWLTTNSENAPAIAFYLEQGFEKVGTT
HFNIGDQAYLNDVFRRIVSM
>RSP_0641 transcriptional regulator, XRE family
MNSNHLIGQRLRQIRKNLALSLSGLSERSGVSVGTLSQLERGLGRPSLRT
IERISQALGVPPFWLLEMPDQHNPEHDQMIVRSGQGVQLTVTEPGMTKTL
VTPRSFDAMQLMTVVMEPGSKSGAGFYRHEGIDVGYILSGSLNLEVDGRT
HVLSAGDCFAFDSQLPHRFENRGGSRAEVLWINTKSRLNGLPPLEPATAE
PRPDPAASGEI
>RSP_0087 two component transcriptional regulator, LuxR
MTQTPQKLSVLIADDHEMVVEMFSLFLTASSEMTVKTAKSLDEALERIKE
HGPFDVTLLDLNMPGMNGVAGLVRAIKLSAGKPVAILTSNPTPRMVDEIL
ATGASGIVLKTTPVRSLGNAIRFMHAGEHYLPLELARDRRQAPDSSGGRL
TEKEMLVMSYLAEGRQNKEIAHGLNLAEPTIKMHVKSICKKLGATNRTQA
VVTARNLGII
>RSP_1867 transcriptional regulator, AsnC family
MIDLDDIDRALLRALAEDATQGAGALGRRFGLSQPAAWRRIRRLEEAGVI
AGRRVVVDREALGFGVTVFLGVKLATKGRVSLEDFERAVTAIPEVQVVQH
VLGLFDYRLRVVARDIADFERVLRRRIMTLPGVGQVEANVLLTEEKRPGP
LG
>RSP_2186 Transcriptional Regulator, MerR family
MAQKLYAGAKLRELRVKLGLTQKVFAERLGASLPYLNQMENNHRPVSATV
VLALAQEFGVDVTKLTTSEAERIVTDMREALADPVFTDSPPLADLRLVAS
NAPAFARAFLDLHRAYRQTHERLASLDEALGRDEADLRPSPWEEVRDFFH
YCDNYLDAVDRAAEHYAAPGGVRRDVFSAAMETLTRAGLDLQISDMPAIR
SREGNALRLSARAAAPTQRFQLLHQVALLTQNDLLEATLDLARFQTAEAR
EIAKIGLANYFAGAALLPYRPFLQAAAETRHDLERLADLFGASIEQVAHR
LSTLQRPGAKGVPFFFVRVDQAGTITKRHSATRFQFARFGGACPLWNVHR
AFETPGRFLRQLAQTPDGVRYLLLARDVSKPGGSFTAPVRRYAIGLGCEV
QHADALVYADGLDLKGSFEPIGISCRICDRQECHQRSVPPLEKRLRVDPD
RRGLLPYEIVD
>RSP_0762 transcriptional regulator, XRE family
MAMDNQGWFSNETATFGDRLAGAREAAGLTQEEMARRLGVRLKTLQSWED
DLAEPRANRLQMMAGMLNVSLRWLLTGEGEGAEGPSEPAILTSEGREALA
ELARMRTQMLALAQEMGQLEKRMRALLRKEAE
>RSP_1945 Transcriptional Regulator, AsnC family
MAVRLDEMDRKILAELQADASQSLDEIARKVGSSKTPVWNRIRRMREAGV
ILRQTALLDAEALGLEACFFVLIRTSEHEAEWQRKFLKALRERPEVLEAH
RLAGDIDYILKVRVANARAYDTFYQALISEVRIYNVTALLSMEEIKATTV
LPV
>RSP_2889 Transcriptional regulator
MNIKEAGERSGLPAKTIRYYEEIGLVRPMRDANGYRRFREDDLHKLAFLG
RARSLGFSIEECRTLLALWEDRSRASADVKRLAERHLDQIEGKIAELQAM
QTTLSHLVSACSGDDRPDCPILEGLSAGPVCCAADQG
>RSP_0991 Putative transcriptional regulator, ROK family
MRQGQETAERSGGAEPGLRGSNQSGMRAHNERLVLSLVRREGALAKSDIA
RMTGLSAQTVSVIMRELERDGLLRRGEPIRGRIGQPSVPMSLAPEGAYFL
GLKIGRRSAELVLIDFLGRPVASRRRLYPYPTPDAVVAFTAETLPRLMES
LSPESRTRVGGLGIAMPFQLWNWVSYVGAPQAEMDAWRTRDIQSELAALT
GLPVHVRNDATAACGAELVFGSGARPKDFLYFYFAYFIGGGLVLNGHLFA
GRTGNAAGVGPMPVPGRDGQMRRLLNVASMSVLAEALEQAGEPSAALWED
PGRWEVSGPILEEWLEGAAAGLASAILSAAALVEMETVVIDGWMPPAIRA
DIVRRTHAALHRLDLSGIEPPLIREGTVGAQARALGAAAIPLSQRYLVEA
MGAGQES
>RSP_0511 two component transcriptional regulator, LuxR family
MDQDLSRPPLSVLVADDQPLVRELILGLLAREPDLAPEGVEDLPEALARI
AAHGPFDVVLLDLVMPGMNGLEGLARAMAANGGRPVLLMSGNLPEEMLAE
AQRLGVAGVLPKTRFAAIAATVREAGRRNRPALPEAERQLLQMLVAGEAT
EELAARFGREAFETALAALFARLEVSTRTQAVLAARRRGLV
>RSP_1741 Possible LuxR family protein
MTINSKIDLEISQLRRMATAGYFLGLHVRFTSPLITMQSYREDWIEYYTE
KGYVIYDPTIRWALSETGHRRWSDLAEQDSRGVFAAAAQFDLRFGVTCSW
GTRESRSLGSFARSDREFTDREVELIFSLFQRLHELTQPPQELTQPQIEA
LRCIAGGDRHAAAAMKLGISESALKARIASARQRLGARTTAEAIQRAKEY
RLI
>RSP_1040 transcriptional regulator, ArsR family
MKVMACTLDIIFSALADPTRRAILTMLLEDDMAVTDVAEPFDMSLAAISK
HLQVLAEAGLITQEKRGRVKWCKLEPDALKAASVWMQGFGQFEPVNLDAF
ERFLARELEEPPELPDAAAS
>RSP_6095 possible transcriptional activator
MVNVPSVRDLLSAVAAHSDWHFAIGVRIRFANPTLLYQTYPQEWVNLYAE
KAMIFVDPTVRWGLEHPGICRWSELRDMDEQGVMEKAAEYGLRYGLVVSV
GEASARTLGFFCRNDRELDDAEAQFALEHVQRLHDLTDGIAKSSEAQLAE
LRNLGATLRH
>RSP_0768 transcriptional regulator, LuxR family
MEGAWRPCHERRRDRRRRGMTRLWESGSGEAEAALVHLAYELALDPQRLP
DFARLWQQRLQREPDPVPELERHFARAARILGRLPCGETGSAEAVLAGIL
RVPAFLSDGVVRIAACNRAAESAFRIAGGAPLAALPFEPADVVALSSTIR
RVARRAEPARNLRLRSTATGATAVLRVCPVEGTEGRARALVLATEPVWPD
GFGGFLQGTFALTPAETDIVHGLTLGLPLREIATLRGRSVETVRTQLRSI
QQKTDTHSQPELLRLVLGLMDLALAPPEGALPAPGGRLLEPLVPQALLLP
EGRRLEWLEFGDP
>RSP_1922 Transcriptional regulator, GntR family, with aminotransferase domain
MREPLALEIDPGHGGPLFLTIAEAITLDITRGRLRPGARLPGTRALARAL
GVHRNTVDAAYQELLTQGWLQAEPARGTFVAQDLPQGMLVRRPAPAPVEP
VAMRAGLAFSDGAPDPELVPDKALARAFRRALLSPAFRAGADYGDARGTS
SLREALAAYLASDRGVVADPARLLIARGSQMALFLAARAALAPGEAIAVE
EPGYPLAWEAFRAAGAEVRGVPVDGGGLRIDALEAALSRDPCLRAVYVTP
HHQYPTTVTMGAARRLQLLELAERHGLALIEDDYDHEYRFEGRPVLPLAA
RAPEGLPLIYVGSLSKLLSPGIRLGYALAPERLLTRMAAARAAIDRQGDA
PLEAALAELIRDGDLGRHARKARRVYRARRDLLAERLTAQLAGRAAFDLP
AGGLALWLRCTGVSAETWAEAAGQAGLALLPGTRFALESPAPQAFRLGYA
ALDEGQIARAVEILARSFPG
>RSP_1606 Putative regulatory protein, GntR family
MAGQSAVEDIRETLRREIVERMEVGDLLPNERELAERFGVARNTVRETMI
HLEAFGLIEKTRRGARVRQPDFDPIFSVFAQHFDHSGKTLGDVLNFRRIV
ETGAAPLAVQGATPETLTRMAEANERMVRSLTVSASAASDYDFHMAMIEA
TGNTVLIRMYRVLSVPLKFYLEVGKSRSLETEESNAQHMRIIEALKVRDA
AELTAALNAHFDHSGAVLASASARLAAQAAPAS
>RSP_2950 Transcriptional regulator, LysR family
MDWDKLRIFHAVADAGSLTHAGDTLHLSQSAVSRQIRALEESLNVTLFHR
HARGLILTEQGELLFEATNQMVKRLEAAAARIRDSEDEVFGELRVTTTTG
FGTLWLAPRLVGLYKKYPALKIDLMLEERVLDLPMREADVAIRMKEPSQA
DLIRKRLMSIRMRLYASPTYAAEHGMPEKMEDFAQHRLICQLPGAPQVAA
GAALVQELMSNDIPSMLTVNNYFGVLQAVLNNLGIGVMPDYLAVAFPQLI
RVLPDVESNDVPVFLAYPEELRHSKRVAAFREFVMEEISLYRKQQQT
>RSP_1083 two component transcriptional regulator, winged helix family
MVPCILALDDEAAILTIVRSTLEQRGFRVVTAKSLAQFRKVDAQEQVDLY
LIDTSLPDGNGLSLLRELRKVSDRGIILLAPQRDEAEGVLGLELGADDTL
LKPFRERELAARVGAVFRRTGRPVASLPAGRPGIDHEFDGYGLSLQARKL
WAPDGREVELTTSEFELLAALLGRRGQVLSRDQIMNAIKGRQWESYDRVV
DGIVSRLRRKLPASRSGSPFIRTVHGVGYTFAG
>RSP_2652 putative Acetyltransferase
MSEDLVLRPITPEDEAAWRPVWQAYLRFYETELPEEVLASTFARLTSGAP
SEPRGLLAWRGGAAVGLVHYLFHRHCWRIENICYLQDLFTLPEARGRGVA
TALISAVYRAADAEGAPAVYWHTAENNARARAVYDRIARKSPFIRYNRVL
>RSP_2324 transcriptional regulator, RpiR family
MGLSSIEELMRSALPDMTRAERQLATHILRQYPVAALGSITALAKAADVS
TPTVVRLVQKLGFKGYPDFQSGLRGEVEAMLLSPLAKHDRWAGGVPDTHI
LNRFADAVVANLQATLSQIDHAEFDAAARLLADPERRIFVLGGRITHALA
DYFATLMKVTRPEVTLMSDMSSTWPPALLDMGRGDILLLFDIRRYENMVL
QVAEMAVEQGVEVVLMTDRWISPAAVHARHTFSCQIEVPSAWDSTVAMLV
LVESLISAVQSLTWEQTEERMKRLEDLYARNRVFRRHR
>RSP_2606 ArsR family Arsenical Resistance Operon Repressor
MLHVLPMRSSMPMSFDLHDPQLDADEAAPVPPEQMVMQAQAAAGFLKALS
HEGRLMILCHLSNGERSVTELESLLASRQAAVSQQLARLRQEGLVSARRE
GKTIWYSIADPKVSRAMVLLYDMFCRP
>RSP_2610 trancriptional regulator, MerR family
MRMEKSAEAFRTISEVADILQTPAHVLRFWESRFPQIRPVKRAGGRRYYR
PSDVALLAGIRRLLHDEGMTIRGVQKILREQGVRHVAGLGGQDPGADDPA
LDEAPFAAVEEEPRGEVVPFAREPQRAETLRRAAAAHAASALSDPEPVPT
KGADEPPEEAPADPPQTPVTEIEPAAPFAWSPPEPLVARRDPGEVPARLR
RSTAPLPPKPEAKRPSPEATLPCEPEAESDGASVDSDGDAAVTWRPARLR
ALPAGCLHAQRAEVLALRERLLALRDRLRQA
>RSP_1297 transcriptional regulator, LysR family
MQGVHQVAFARRYLPPVGQLAAFEAVTRTGSTAAAARELDLTQGTVSRLV
QGLEEQLGVVLFQRQRKRLRPTQAALAYAAEVRRALDILGRASLRLASDP
EGGVLSLAILPTFGTHWLAPRLPGFLKAHPGVTINLATRLKPFEFEGEEF
DAAIHFGSPSWPRAGHLRLFGEGVVAVASPEFLAAHPVAGAADLLALPLL
TLETRPRGWAGWFAHHGVAAAVPRGMVFDQFATMMQAAIHGIGVALLPEF
LAGPALAEGTLVPAHGGPVEGRHAYWLVWPEDRGDHPPLAAFRDWLRAET
EGLA
>RSP_2751 hypothetical protein
MSVDRKPERSPFDKERDAFLLEVSANRKLSAAAKSIAIQIAVKHANRMQF
NNGAWDLAWPSFETLAEATGYQRNAVIVGVNQLATEGHLDVRRQKGGSGR
SNRYRWIIKGTVTIDAQDAVDDGENSIVDDTVSDENSIVEDTRTVSSTIP
EPLEEPLGGAGAHAPAPEPPKTAPSPDTVESLNNVQDASAGARDRARSDD
VQGRDHPASDPDMDGRVFDLVPEYAPADGIAQLPVLRRGQHISLAERDAL
SAGWHGLGPSVSPPDAVEEDGPLPTAVAAAAFARLHRDLGDAEAFAADVL
DGFAGGDGDAAARAARIAAKVLRQAVSQGTGPEVLEAHLEIAQALLRDGS
GSDRLARSAVRAFDRAARAASAAIRAAHKLRPQPDEEEVTC
>RSP_2719 transcriptional regulator, AsnC/Lrp family
MTVLDDLDGKIIGLLAEDARKPLTEVAGQVGLSTSAVNERVRRLVAQGVI
RRFTLDASPEALGLPVLALVWAAVPHAREAAFRSFAASHPGIVECHHVTG
VWSYLLHLRVADLAGVETFLTELKSEDLLERSETMLALSTVRSAPWVPR
>RSP_1191 transcriptional regulator, MarR family
MAERTEELAVALFGELFMADQLARNRLSKVLPKGMELSHFGVLNHLARAA
EERTPAQLARAFHVTRGAMTNTLAKLEWAGHVHIRPDWDDARRKFVSISP
SGRSARDAAVAAIAPLIAEVVHSLGAERVRAVLPVLREMRTRFEEED
>RSP_1243 transcriptional regulator, LacI family
MRQKVATIQDVARLSGVSTATVSRALSHPDRVAEPTREAVLRAVRETGYV
ANPMARNLRRRRTGSILALVPNLANPFFSEILSGLASVLTPAGYGLLIAD
THTDPAGRLTYYLESGLADGVVVFDGTLPEEALATRRRPPVILACEWMGE
TLPSVRVDNAAGAEIAIRHLYEMGHRRIGHAMGPVGNVLTESRLAGARRE
LEALGLPLREDWIFRGDFGLASGSAAAMTWLGLKERPTAVFCASDEAACG
FMGALQHAGISVPSAVSVVGFDDIEVAAHLVPPLTTIRQPRRQIGRRAGE
LLSAMIEARALGGPSELLPVELIRRQSVAPPPPGQGDLP
>RSP_1962 hypothetical protein
MDIVRQHCRLSISDIAAEAAARSSSIEEKIAASGLEPSGPWIFVSHNLPQ
DAETLFDWEIWRPVAGLPNEATAMEVEHIPSARVASRLFRGILAEIFTCG
YLPLLTEIAEEGLALSGESREIYHQWSGPEEKAEVEIQFVLA
>RSP_2346 Cold-shock DNA-binding domain protein
MVEDEKALQLVHGRVKWFDPAKGFGFIVTEENGADILLHANVLRNYGQSS
VADGAGITVKVQSTQRGVQAVEVIEIEPPEGTTFHLSEDSEATTPEEIAA
RPLEPGRVKWFDKGKGFGFANVFGRPEDVFIHVEVLRMSGFADLAAGEAV
ALRIIEGRRGRMAVQVVSWEVAARQHQQPA
>RSP_6096 transcriptional regulator, LuxR family
MPRDCYFMVCRITMEQHKLMHLSDMKEAFLQIAQAGFYVALRLGFYSPED
ELNTFPEQFVELYTARGLALQDPLMRWTFTNHGALRWSAVDQPDPLGVIA
RYRQYGMRYGATICLAGRGPVPKKSFGIFARADREFSDAEIVDLRELLTT
LHVNEPQSLTESQVEVLRMLSTGMRYKQMAYALGISESAVKARLKGAAQR
MNAKTAAQAASVAASRGIL
>RSP_0774 RNA binding protein
MSTDAIRRIPSLIAAEIAARPDQVAAAIELLDGGATVPFVARYRKEATGG
LDDTQLRTLSERLAYLRELEARRETILGSIRDQGKLTPELEAQVVKAATK
SELEDIYLPYKPKRRTKAMIARENGLGPLAEAILADRAAVPAELAQAYVS
EAVPDVKAALEGARDIVAEGLAENADLLGRLRAHMKQVGRISAKVVEGKE
AEGAKFSDYFAHSEAWATAAGHRVLAMLRGRNEGVLTLDLEVDADAARGE
SPAERMAGMALQAAGKGPGDQWLREAASWAWRVKLRTSLTLDLMAELRER
AEAEAIGVFARNLKDLLLAAPAGGKVTMGIDPGIRTGCKVAVVDATGKVL
ATSTVYPFQPKNDLRGAQIELMKLIRAHGVTLIAIGNGTASRESEKMVAD
LLAALPGDAPKPVKVIVSEAGASVYSASALAAAEFPDLDVSLRGAVSIAR
RLQDPLAELVKIEPKSIGVGQYQHDVDQHRLGRSLEAVVEDAVNAVGVDL
NTASAPLLARVSGVGPGLAEAIVQHRNANGPFAKRRDLLKVARLGPRAFE
QAAGFLRIPDGTEPLDASSVHPEAYDVARRIVAACGRDLRSLMAEPQRLR
ALDPQDFTDERFGLPTVRDILAELEKPGRDPRPTFKTATFTDGVEEISDL
KPGMLLEGTVTNVAAFGAFVDVGVHQDGLVHVSQLADRFVKDPHEVVKAG
DVVKVRVVEVDVARKRIGLTMRKDSADARAQASERRSAEPPRKGGKPLPR
QAAPRETSAGNPFADALKGLRRE
>RSP_1952 Cold-shock DNA-binding domain protein
MANETGDITMANGTVKWFNATKGFGFIAPAGGSKDVFVHVTALERAGIRQ
LDDGQAVSFDLERDRNGRESATNLVLA
>RSP_2200 transcriptional regulator, MerR family
MMTSDVMTIREMCDAYDVTPRTLRFYESKELLFPIRDGTRRLFTRRDRAR
LKLILRGKRFGFSLEEIRQLLDLYDRDGSQELQLARTYQVAQQRLEQMER
QRAELDEAIAELKDQLAWGEEALAAFRRAAAE
>RSP_1435 regulatory protein TetR family
MPLTDTPPSVPQKPRRGRPRGAPDASLAHQSLIRAGLEHLTEKGYSSVGV
DEILKAARVPKGSFYHYFRNKADFGLALIEAYDTYFARLLDQAFLDGSLA
PLARLRLFTRMAEEGMARHGFRRGCLVGNLGQEMGALPDDFRAALIGVLE
TWQRRTAQLFREAQACGELSADHDPDALAEAFWIGWEGAILRAKLELRPD
PLHSFTRTFGRHFVTRTQE
>RSP_0981 Transcriptional regulator, GntR family
MTGAAGRCLLAPMQNPSRPSDLTASAHERLYRSLRAQVMHGELAPGQALT
LRGLARSFEVSMTPAREAVRRLVAEGALSLSSSGRVATPELSPERIEELA
AIRALLEPELAARALPRAHFALIDRLAAINAANAEAVAKADAVAYIRTNL
EFHRTLYLRAQAPAMLAMAETVWLQLGPTMRALYGRLRRNEPPQHHRNIL
AALRAGDEPGLRLAVRTDVTQGLRHLIG
>RSP_1915 Transcriptional regulator, LysR family
MDRQVPHRLTVPLNALRAFEAVARHLSIKEAALELGVTPSAVSHQLRGLE
EALGLTLLRRVGPALELTEAGARLAPDLSEGFSRISAAVGGLRQDRSAGP
LRLSMLPTFAAHWFSPRLTRYPFERNGFDLLISTTQEAVDLSAGVADAAV
RHGQGRWEGLQADLLFDETVSLFGAPPLGRHDPDDMRAQIARRTLFLSQH
RKENYARWNATLPGGPIRPAAVMMVDSAGLALRAAMDGAGVALAGVEIAA
FDVRAGRLAQLFAHRAPTGGGYFLVYPDALARDRRVRNLSRWMVEASAGE
RALAQSG
>RSP_0847 two component transcriptional regulator, winged helix family
MASLKKILLVDDDDDLREALSEQLVMTEDFDVFEAASGAEGMEKAKAGLY
DLVILDVGLPDTDGRELCRRMRKAGVKCPVLMLTGHDSDSDTILGLDAGA
NDYVTKPFKFPVLLARIRAQLRAHEQSEDAVFQLGPYSFRPAQKMLVDEK
ERKIRLTEKETNILKFLYRASQGVVAREVLLHEVWGYNAGVTTHTLETHI
YRLRQKIEPDPSNARLLVTESGGYRLVA
>RSP_1138 two component transcriptional regulator, winged helix family
MSEPQAHLLVVDDDERIRSLLQKFLIRNGFLISTARDAAQARRLLDGLEF
DMIVLDVMMPGEDGVSLTRSLREDLATPILLLTARGETSHRIEGLEAGAD
DYLAKPFEPKELLLRINAILRRVPSARPELGPKVLHLGDVRYDLERGELW
RGTEPVRLTATEAALMRIFAAQPGEAVSREKLVGDLGRDDSQSQERAVDV
QITRLRRKIEVDPRQPRYLQTVRGSGYMLAPD
>RSP_2425 putative CarD-like transcriptional regulator
MTKTKKPEFRPNEFVVYPAHGVGRIISIEEQEIAGIRLELFVISFEKDKM
TLRVPTHKATEVGMRSLSTPDVVTKALDTLKGKARVKRAMWSRRAQEYEQ
KINSGDLMSIAEVVRDLHRTDDQREQSYSERQLYEAALERLTREVAAVSG
VDEAGAQKAVDAVLVSRAA
>RSP_1164 predicted nucleic-acid-binding protein
MTRGGRDDMRDEPERRCLATGESGPKAGLVRFGLGPESQVVPDILGRLPG
RGMYVSADRKAIEKAAAKGLFARAARQPVKVPEGLADLVEAQLARRVIDL
ISLARKAGEAVAGYEKVKDWLSKDEAKVLIQASDGSERGKSKLHPPEGKR
SFIGCLTARELGLAFGREHAIHGALAAGGLTTRVQDEAARLAGLRGQIGG
RAAGRDTKDA
>RSP_2081 putative acetyltransferase, GNAT family
MPPADIDIRRADPTDPTFQPIFMRHLTLMRETSPPESVHALDPADLAAPG
VFFYGMRVGGALVGMGAFKAIDATHCEIKSMHVLSEARGQGLARRLLEHL
LAEARAAGFRRMSLETGVEPPFAPARLLYERAGFETCGPFEGYWDDPNSV
FMTRSL
>RSP_1892 putative Cro/CI transcriptional regulator
MKHPVDAHVGKRIRHRRWMVGMTQQQLADCVGIKFQQIQKYETGMNRVSA
SRLWDIAEALGVSISFFFEGLEGAGDQARQAEGDRITDKEALELVRSYYA
IPEAQRRRLFDLARVLSEAA
>RSP_1681 two-component transcriptional regulator, winged helix family
MSRIALVDDDRNILTSVAMTLEAEGFEVETYNDGQSALEAFNKRMPDMAV
LDIKMPRMDGMDLLQRLRQKSAMPVIFLTSKDDEIDEVLGLRMGADDYVK
KPFSQRLLVERIRALLRRQEAIAGGEADAQEESRILERGNLRMDPLRHAV
SWKGRDVSLTVTEFLLLQALAQRPGFVKSRDQLMDVAYDDQVYVDDRTID
SHIKRLRKKMRAADSDFAAIETLYGIGYRYNEE
>RSP_1990 Transcriptional regulator, AsnC family
MDELDRNILGILGADARTSVATLSRRLKVARSTIQARLERLETSGVIAGY
TLKLGEQARQGRLRASVLLTIEPRTQAAILTRLKAISEVERVFTTSGRFD
LLLQIAAPSTQVLDQVLDEVGAMTGVRSSESLIHLSTRIDRAV
>RSP_1888 possible acetyltransferase (GNAT) family
MTVAGLHLRLARPGDLSAVDALFAHSYARLIRADYPPSVLVTAVPRLARA
QPALLASGRYWLAETEGGILAAGGWSPRGAAEGEIRHLVTRASHVRQGIA
SALLSRSIAQAAAEGILRLHCLATRTAVPFYERMGFRRLGEVSVPLGPGV
AFPSERMLRAP
>RSP_1616 conserved hypothetical protein
MVMLEGNPWFILRDVLIALGYNLGPRTQTPNVSVAARKLASDEAQLYRIQ
VKVVSRSGAREVMLISESGLNKLVMRPDKPEAKKFQDWVTREVLPSIRKT
GTYTMPGGVGPIEGDTSVLTRLNEDPPPDDLQLNRKQLKVTPRWAPSGAP
C
>RSP_1486 regulatory protein, TetR family
MTTGDGRSRLLAAATRLIRTQGFAATSVEAICREAGVTKGAFFHHFPSKE
ALGVAAAEAWSDVTGRLFAEAPYHRPADPLDRVLAYIDFRRALVAGEIAD
YTCLVGTLVQEAYGSDPIRAACGASILGHAGTLEADMAAAAEARGVADVD
PASLARHTQAVLQGAFILAKAGGGAAAVEEALDHLKRYLRLLFANPGASG
A
>RSP_0027 hypothetical protein
MSRAAPFLIDDLLPEGVRLHAVRSVECRRIPAARSVVALTLAAGQEARLR
SRLAGLGSSVVVLVAAEGTRAGEEAARALADRRLPGLVLVLEAQAGVDWV
GRLRTLARRLVPQAALPQEAEPLPGAAASRYLAKMRELEVLIDPEAAEAP
AGERPLDGARNWRSRLHARAVTRFLHRQGRASLHAARLLDRTATAREMTG
GFGTLWAALDSERPPRALGSEDMAREEALLDGFIAQEKARQAALVRPAPW
RGHGRLPGVGLRA
>RSP_1449 Putative transcriptional regulator of sugar metabolism
MQSYERHAKVLELLAVERRVFTNQLARMFDVSRETVRRDLLDMEQEGVLV
RVHGGATAVERDIAPEPAFSERLVAHAGKKAAIGALAATLIPRGSTVFID
AGTTTCAFARALARVGDFRIITNSIEIARLTGPAQTCDTLLLGGRPHADV
PATYGEMTLSEIDRFLADYAVISPVGLHADRGATDYALHEAEVARAMMRR
SRDCIMLCHSEKIGTESRVSICRLDEIGHLVTDETAERSLRLPRGEIHYA
PIRPGA
>RSP_1550 regulatory proteins, IclR family
MVQSSPATTRRARGRPKAAEDKTEQNTVQSLDRALAMLRLLSQSEGMTLS
ELAAESGEAAATVYRALVTLQAHQMIEMEEQGQVWHIGGGAFRVGSAFLR
RAKFVERARLPMDRLMRAAGETAALGVEADGRVMHLAQVETRQAIRAYFP
EGSSAPLHATAVGKALLAWYPAERIETILDREGLAKFTSLTITSASTLMR
DLARTRDRGYALEDQEGAEGMRAVAAPVFNSFGEPVAAITLAGPAFRVSL
SDSTRFGTLVREAADEVTEATGGVRG
>RSP_2965 Transcriptional regulator, LysR family
MDWDDLRIFLGVARAESLSGAGRGLRLDPATVGRRIARLEEALGVPLFAK
SPQGYALTEAGQRLLAHAERAEQAVGEAAEDLQGAAGLSGQIRIGAPDGC
ANYLLPQVLAQICTDNPGLEVQIVALPRVFNLSKREADLAIGVSRPEAGR
LRVQKLADYRLHLAASAEYLSRHPPIRALEDLKAHQLVGYIPDMIFDKEL
DYLTGLGSGSVPFASNSVSVQLNWLRAGAGVGIVHDFAMPSAPELVKILP
EALSLSRSFWLIRHQDDVRLERLNRFTDALVQGVRREVHRLEGMTRL
>RSP_6228 hypothetical protein
MPQSHHRETARLVRHRRWVLGLSQEDFAARLGLDVTDVRALEAGRPNAKM
FSSTSLETLLSAGSAGGSPIGRG
>RSP_2075 Putative Transcriptional regulator
MEETSMGKLSICRQNVPMKSMPSRLPKIDQAGVARRLEALRDALGLDKGE
FAQSFGLDPSSYSKVLQGKKPLKSEYGHAIAEGWGVSMDFIYRGDMSRID
ETLRTKVMQNLTAPMR
>RSP_0611 transcriptional regulator, ArsR family
MMDPSRTHKKVPVAELDRSACLGPDGAVAQVARCLKMISGRWKLPILFRL
YADGMQRSSLLLRDIPDVSQKMLTQHLRELEDDGLVRRTDFGEKPPRVEY
RLTDRGEALMPVLLAARQFSEEHDRAV
>RSP_0489 GntR family transcriptional regulator
MTDAITLPALEAPLRPSVTDQVFDQLHDRIIELDLPPGTKLSEIEVARQF
GVSRQPVRDAFYRLSKLGFLSIRPQRATTVSQISTRSVMQARFIRAAIEA
ETVRVACERLTEADHAALWRLLDLQREASEARDRLRFHALDDQFHRELCD
RSGCGFAWEIVRENKSHMDRVRYLSLAFASQDAYGDHLEVMQAIEARDAP
EAMRRMHSHLSRIKIQIERIRLDHQAYFAQEDACLPDL
>RSP_0186 Transcriptional regulator, TetR family
MSPPRRTRIQRRNSETILDAALEVFSAQGFRGATLDQIAEVAGLSKPNLL
YYFPSKEAIHLALLSRLLETWLDPLKAMNPDGDPVTEILLYVRRKLELSR
DFPRESRLFANEILQGAPRMRRVIETELKDLVAEKARILTRWMEEGRIAR
LHPVHLIFSIWAMTQHYADFEMQVGTVLGPDEPDPYPEAGLYLDTLFRRL
LAV
>RSP_2882 two component transcriptional regulator, LuxR family
MIEPSRPLQSALIVDDHPLFCDALSMTLKAVAGLTHIESADRLETALARL
DLQPAFDVVVLDLNLPDVNGLDGLIRLKASLGAVPVVVVSSLADNRVIGA
ALKAGAAGFVPKHSRREVFRAAFDAIREGRSYLPEGFTPHSPGAPASQRE
EAIARLALLTRQQAKILQLICEGRLNKQIAYDLTIAETTVKAHVTAIMRK
LGVQSRTQAVLMVQEASFASLMPENS
>RSP_1077 transcriptional regulator, LysR family
MIDKLEMFIALARERHFGRAAEACGVAQPTLSSAIRQLEDQLGVQLVFRG
SRFQGLTPEGARVLDWARRIVGDARALRDEMRSARSGLSGNLTLGVIPTA
VPMVADLTAPFLERHPAVHVRILSRTSTEILSGIESLEFDAGITYLDNEP
LGRVTQVPLYAESYRLVCGPAFPLPETGSLGWDEVARLPLCLLTADMQNR
RIVNQHLAGTGAPASPSVESNSTLTLFAHVMTGRWASVLPKKLADLFAGT
GRLRAIPIVGPEVSHQVGLIAAYREPHTPILTALIEAARRLEEPAG
>RSP_2651 conserved hypothetical protein
MMRHWLFAAGLFLSACGGMPEAEVAMERPHWLVIDPLPQMKVFSDSAATR
PQRPNAEIARDFLELTFQMESGRRLERFSRFEGPITVSMTGPVPATAEAD
LARLLTRLRHEARIDIHETEGPAAVSIEFVERRRMQALVPTAACFVVPRV
TSFETYRRVRREAQVDWATLQEREQVAIFIPADTSPQEVRDCLHEELAQA
IGPLNDLYRLSDSVFNDDNFHTVLTGFDMLILRATYAPELRSGMTRAEVA
AVLPKLLARINPKGGRATAPAPEDPTPRPWIEAIEEALGPTGSDRRRHAA
AVRALGIARAEGWQDARMGFSLFGFGRLGVADEMDLSVAAFIEAVRIYLT
LPGGEIHTAHIDMQMAALALSSGQAPEAILLCNRAIPVASRAENAALLAT
LLMIRSEALRLSGHAAEARASRLDSLAWARYGFGDEAEVRSRMSEIAALT
PSRPSLALAVTDNGDSG
>RSP_0591 Cold-shock protein
MAKGTVKWFNATKGYGFIAPEGGKKDVFVHITALERAGIRALNDGQAVTF
DIESGRDGRESATNISIA
>RSP_2730 Transcriptional regulator, ArsR family
MDDRTALTAFAGLAQETRLQILRLLVRAGPEGLPAGEIGAAIGASSSRLS
FHLTQLEQARLVTSRREGRFVIYAAAYPVLSDLVTFLMRDCCADRPEICA
PLSEARHD
>RSP_2853 Transcriptional regulator, TetR family
MPDSSAPVPRGDEILDQIRGTFAEKGFDGASMQDLARAAGMSVGNFYRYF
PSKAAIVEAIVRRDLEGVERDFAAVVSSDDPMARLREILRYRIEVELCEE
DAPLWAEITAMAHRNPEIAGICERMETEIRRAFLGIFARVTGQPPAEAEA
RFAAHAAFLVMLVRAWALDWPQKRAGAVELKSLLLRSIDATLDEVARCEA
QGASKARGLPCGA
>RSP_0443 Rrf2 family transcriptional regulator
MKLSTKGRYAMVALVDLALAQKSGNELVSLAEVSKRQDISLPYLEQLFVK
LRRAGLVEAVRGPGGGYKLARPAESIRVSEIMEAVEETVNAMHTGAGASG
GVSGSRAQSLTNRLWEGLSAHVYVFLHQTRLSDIIKNEMRPCPAVPALFR
VVDED
>RSP_2038 possible acetyltransferase
MGTLNILIRPYDAATDLKRLSDIWFDASMAAHPFIGEARLVEQRQLIEED
YLPTAETWVACHEREAVGFISLLGSFIGGLFVAPDRQGMGVGRKLVSHAL
ARHGELSLEVYTANEQAVRFYSSLGFRELSRRDVDDFGFPFPNASLHLKV
>RSP_0316 Transcriptional regulator, LuxR family
MIDPRTLERECLVRCVELAHPSIQIVGFGSFEEWRSRRDHHAHQVILYST
GNRSVSEVSREVAALVTEAGSSPVVVIGAANDLREMIAAFDCGARSYLPS
SVGIDDIVEASRLATFDGIFLPTASLTALRGALPDRAEPQIAVDEHLTER
QRAVCDALRRGKSNKIIAGELNLCESTVKVHIRNIMKKLGAKNRTEAAFK
LNSSMFAGEGRLS
>RSP_1055 transcriptional regulator, LysR family
MLCTGAHHFHAIRTGADMGFENWDEVRTAFQVARLGTVSGAAEVLGVHHA
TVIRHIDALERRLGARLFQRHARGYTPTEAGRDLLLVAQTTEEQFSQLSS
RIKGNGETVAGELVVTSVPGFSSLITPVLTSFQERHPAVVVRYLTDLRLF
RLEYGEAHVAIRAGSTPEEPDNVVQPLARLRTALYAAPAYAAAHGLPAGP
EEFERHRFVGADIPRAPYHRWLRDQVSPDRITFRGTESAALADAVRQGAG
LGFLPVREATGTDLIEILPPRPEWESPIWIVTHVDLHRTLKVQNFLSHLK
EAAKDWVDV
>RSP_0185 Transcriptional regulator, TetR family
MPDAVRPSKREETRRETERTILAAAEKVFAEAGFGGATMQLIADMAGLPK
ANLHYYFPTKEALYRRVVGEIFEIWLQAAEALDQAQCPVEGIGAYIDAKM
EISRRHPFGSKVWASEVMHGAPVIQDYLESTLRDWTEGRAAAIRRWISNG
QMQPVDPHHLLYMLWATTQHYADFGHQIETLNGGRPLSDEDWAAATRSVK
EIILRGVGAL
>RSP_2201 transcriptional regulator, MerR family
MSDTRLTFKEMCARFDVTPRTLRYYEYIELLQPEKEGRARFYGPREIARM
TLILRGRRFGFGLEEIRQWLLIYQQKGTRPQLEAWIEMADRQLKELARQR
AELEVAIADLQALRDSTAAELAAPGS
>RSP_2027 transcriptional regulator, LysR family
MDSGLKALEAVLAIARKGSFRAAALDLGVSTTALSHTVARLEAGLGVRLF
HRTTRSVALTEAGREFVARIAPALTEIRAALETVRSQRATPSGMLRINAS
VQAGRAVAPLVLAFLRRYPEMRVDLVTEGRLLDIVAEGFDMGIRPADLVP
RDMIALPLGLPVRHAVVASPDWLVRHPEPRSPADLDPDACLRVRLPNGAL
LRWPFQKDGVPLPFEASGRLTVDEAAIARAAVLDGAGIGYFIEADVAEDI
AAGRMIRLLEDWTPNRPGFSLYYSGRRNPSAGFTAFLAMAREREAA
>RSP_1790 probable transcriptional regulator
MLTIGKLAEAAGVKVPTIRYYEQIGLLPPPERSAGNQRLYGHRAEERLAF
IRHARDLGFPLEAIRDLLSLSDRPDQSCEAADAIARAQLSAVRARIGRLR
ALEAELERMIGQCAHGTIADCRVIEVLGDHAHCAHEHRKEP
>RSP_0722 transcriptional regulator, AsnC family
MELDATDRRILTVLQKQGRITNAELSERVNLSPSACHRRVQRLEEEGYIA
GYVALLDARKLARPTTVFVEITLQGQADDLLDRFEREVARVPDILECHLM
AGTADYLLKIVAQDTEDFARIHRQYLSRLPGVAQMHSSFALRTVFKTTAI
PV
>RSP_2922 Transcriptional regulator, AraC family
MTISPAKAAAPDKARRPRRFVFLLLDRFTMISFAGAIEPLRIANRVAGRP
LYAWALAGENGTEAVCSNGAAFRLDMGLEEIDREDVLLVCGGIDVQKATT
RPVVNWLRREARRGVTIGGLCTGAYALAKAGLLDGKKATIHWENQDGFTE
EFEEVRLTKSVFVMDGNRLTTAGGTASIDMMLKIIARDQGDDIANTVADQ
LIYSSIRTDQDTQRLSIPTRIGVRHPKLSEVIRKMEANIEDPISPADLAE
EVGMSTRQLERLFRRYLNRSPKRYYMELRLQKARNLLMQTDMSVINVALA
CGFASPSHFSKCYRAHYATTPYRERGTQSAPGAVEEE
>RSP_2281 two-component trancriptional regulator, winged helix family
MSRAPLVAILDDEPEIRRMLALALEEAGFQTTAFGRATEFEAALKRRAPD
VCLVDLGLPDRDGLAVVHRLALESGAAIIIVSGRAQVQDRVTGLELGADD
YIIKPFDPAEVVARVRARLRKGRAESVPATQTAHFSGWTAHFDRYLLVAG
DGAEVAFSHAEGEVLRLFLESPRRLISRAQMQESLGGAAGESFDRAMDVR
ISRLRTKLGEDPRNPTLIKTIYGAGYIFLGEVEWR
>RSP_2987 probable acetyltransferase
MTRLIRSVEAADEAAFRALWADYLSFYRVDLAPEVTDATWARLLEPASPL
TGRLVLTEGRVRGFALHHTHLSTWNLRPDVYLEDLYLEPSARGLGLGRAL
IEDLIALGRAAGWGRLYWHTDEGNRTARALYDRFTRADGHVRYRLTL
>RSP_1925 Transcriptional regulator, GntR family
MQHSPEETQSARIARILADRIISGEIPPGARLRQDHVAIEFGASHVPVRE
AFRELQTRGLAESEPRRGFRVTEFDVAELREVAEMRSSLESLALRHAAPN
LTRAILLQAEEITRRGDSASTVREWEEANRHFHRLILSPCRMPRLLRTID
DLQAASARFLFAAWRRDWEARTDHDHRAILDALRKGQTDLACSTLARHVG
WVGRRRPSANNGDRPGTYDIHD
>RSP_0386 Cold-shock DNA-binding domain protein
MPTGTVKWFNSTKGFGFIAPDDGGKDVFVHISAVERAGLKGLSDNQKIGY
ELQSGRDGRSSAGDLRLL
>RSP_0752 Acetyltransferase (GNAT) family
MQDALELRDLEIGDAGWIVARHAEIYAAEAGFDLSFEAQVAEHMSRFIRT
RDPARERAFIACLGGRRVGCLLCTRMGDESARISLFLVEPEMRCRGIGRH
LLQQAMNFARAHGYASLCFWTFNGHHTSESLYVSSGFRRVTSHPAHSFGR
DVIEQEWEIVL
>RSP_1014 sigma24
METSDERLAGAAAEGDRGAFALLVERHYDRIFGLSWRLTGSRTEAEDLAQ
DICAALPMKLRGWRGEARFTTWLYRVVVNASHDLRRRQSAHSRAAAGWGD
WELARQDEIGEARAAEEWLAAAMTALPVELRDTVALVLGEEMTQAEAGAV
LGLAEGTVAWRMSEVKKRLRAMALREARA
>RSP_0628 conserved hypothetical protein
MSLEARVLTGAALEARLDEVARLRIAVFRDWPYLYEGSMDYERSYLSTYR
TSPGAILVGAFDGDRLVGASTGTPMEDHAEDFAAAFARTGLPLDEIFYCA
ESVLLPDYRGHGMGHRFFDLREAHARALGRRHSAFCSVIRPEDHPLRPAA
ARSNEPFWRKRGYAPLPGVVAHYGWTDVGEERETQKPLQFWIRDL
>RSP_1607 Putative regulatory protein, GntR family
MARDRNLFKMLVNRLLDRLARLPVGAELGSEGELAAELQASRTTVRAVLT
HLAEAGLLSWEGRRKVVLRAPSPSDRFDEGETRPRQELVEEPFLAWVLQG
DLPPGTLLHESDLARRLGVPVATVREFLIRFEPFGLIEKQPNRHWVLKGF
TRAFAEEMFAVREMFERHALRGLLAATAPGGPLRADLESLRAEHEALSAG
PEEELTAFPALDARFHRLLCRAAHNRFILDFSRTISIIVHFHYRWNKRDE
LRRNRAALNEHLAIVEAVLAGDAPRAAAALDAHLATAYRTLMTSVTWADA
>RSP_1866 Transcriptional regulator, AsnC family
MLDDTDRRLLRHLLAEPALGTAELAARAGLTTATCWRRLERLTERGVIGA
RQAVIDWRRLGYEVEVSLRFTLDKTDPRAFDEFLAAARTVPEVIGIETFL
GRVDVRLNVIARDMKHYQELYRSRILSLPHITDIEALMLVATIREAEALP
L
>RSP_0878 putative acetyltransferase protein
MIPRKAREAEDWEAIRGLILRAFAFMEGRIDPPSSAHRLTPEAIARQARE
AEVWLMGDPAVACLFLTPLPQALYLGKMAVEPALQGQGLGRVLMALAEDR
ARALGLPALELETRIELVENQAAFRAMGFTQVAAKAHPGFDRPTSLTFRR
ALGPAPARARG
>RSP_1472 hypothetical protein
MREATSSATDALRAGNRVVAGGISAIVLILAAAAVFLFLNLPDADAFNAR
VERLFVEVDALRSGPEIRLLEILAQSGTTFSEVLASYRTVIFVLLVFSTS
LLVAALVLLVTIVALNRRMSAIQRSGIQVASLMISRESRSVFINDMEFSL
TEAAIETLSVLAEARMDDDMLSGAQIEAVISGKNVTDCDEAAGATRVKRL
RDALGNQLVSELLVKTVARRGYMLAVEKDVIRMV
>RSP_2026 transcriptional regulator, AraC family
MPDGNASFRTQRFTGGDAAQPLPSIMFAERRRLAILGENGFVETCVRTIE
GSDIVFGSVRSSGHVIELREPDRLTLLLPRAGRLRVRIGSAEHGVTPGCP
MAFRPGERVTDATAGRDGLFAAITLQVPAARVRALAEAAELPLRGLLGPD
AVALRARLEASALEGMARLACDLFLRPKTALPPGVALAITDFVDAQLLAL
MDGRPAPARCRVLSAFHRVRAAEEIMHAHSEEPLAMLDLARRLDIGLRSL
QLAFREVHDGLSPREVYSRIRLDRARQRLLAASGADRVTTIALDSGFGHL
GRFAMAYARTFGELPSETLARRRRI
>RSP_0018 Putative transcriptional regulator, gntR family
MTDTIWHPDLAQFPGPKYLALTRALREAIREGVLLPGVQLPTVRDLAWRL
SVTPGTVSRAYQMATQEGLLAATVGRGTFVAAAEPRLGPTQALFVDREPQ
AAPGLLDLRSPQLPDVGQMPLFAEALRRVAGQVGADWRDYPTQREETALR
EAVRDWLGDRVLGPVTPDDIALTHGGQSGIGLVMFCCLRGDRPVVLTEEL
AYPGFRHAARLARAEVVGVELDQHGIRPDALEACCRKHLPQVLCVTTEAQ
NPTAVRMPEERRAEIVAIARRHELQIIEDDCYTVAESTLPSMRALAPERT
WYVGSLSKTVSAALRFGYILCPTGRGEAGRLTAQHAFFALGRPVSDLCLD
LFRSGQAVEIRSRVQSAFADRLKAIVNGLGAHDLVWQPGLPFVWLRLPVG
WRTSSFTRTAEAEGVLLRSADEYALVHGRSPNAVRLAIAGQVPRARLEAA
VDRLSRLLVSPPSELPV
>RSP_1127 ElaA, acetyltransferase, GNAT family
MKIERTDDIEACRALRRTVFIEEQGVSEAEEIDDLDGEAIHLLATDAGRP
VGTARLLVRGETGKIGRVCVLAHCRGTGVGAALIRAAVAELRGEPGLRQL
KLGSQSHATGFYEKLGFRQVGEEYLDAGIPHRDMVLDL
>RSP_2800 acoR, Putative AcoR, Transcriptional activator of acetoin/glycerol metabolism
MLNSRPAEPFDQRATMRAWERLLSGETTDLPAGVRPEILRSWQRCQTGGT
DALAAGAPSVPRPDTPTRSCELLEAASDTLDQLGRLLDGTGAMLLLCDGE
GVVIRAMGDPSTREKGREINLEVGGRWDEEAIGTNGIGTAIREGRPVFVH
ACEHFCAGIKGWSCAAAPIRDPFGFGTIGAIDLSGGPGIFRPHNLALVAA
AAREIEALLGERHRQERERLLAAFIDAGASRGPDDAVVILDRVGRVVYSR
NPPQGGGLRDGLLKVGQPLLDLGPHPSDTQIVAALPPALQPSGISPLILD
GERRGTVLHLPARTKPRPVSAEIRPRAGTAEPPLPIVGASDIFLEAVDLA
RRAAEAGSSILVQGETGTGKELFARLVHASERHKADAPFITMNCGAIAVE
LVASELFGHVAGAFTGAMRDGRPGKFELAHGGVLCLDEIGEMPLDIQPYL
LRVLESRAIYRVGDSRRRPVEVQVVAMTNRDLMQDVSSGAFRADLYYRIS
TLTIEVPPLRARQGDVPLLVDHFNRAAARRLNRAPLRFSDAAMALLDGWS
WPGNVRELRNVCDRLHVLVRGDRVEVSDLPEPMRRAPTLPSRPGEQSLDE
VEETAIRQAFAAARGNVTRVAAILGVSRPTLYRKMRQYGIRRLTD
>RSP_2182 betI, transcriptional regulator, BetI
MPKLGMEPIRKAALVKATIVEIGRAGSLDVTVSQIAKRAGMSSALAHHYF
GGKEALFIAAMRHVLSLYGAEVRGALLGAETPAARITAILQASFSATNFR
REVVGAWLNFYVLAQTAPQARRLLAIYQRRLRSNLLVGLRPLAGERAADL
ADGLGALIDGLYLREVLKEGPPDSAAAVACARAYLNAHLKECPL
>RSP_0794 catR, transcriptional regulator, LysR family
MSACRAARTRQAQFGGPAVRSLCPAGRRRVPGSGLHPSSGQTPGPAAATL
ARREGGPDMQKAVREEPAPSDLRVGVQAGPELTFRKLKAFWAVAQSQSLT
GAAKLLGITQPSLSQQIIGLEQSLGYPLFVRRSNRMILTEAGVLMLRKAE
PVLRGMQDLEDTLAAYGSGQRHPLRLAGVESLLRTILPEALRHMDLDGTA
ECDLLEGAPADVLEMLYSRQADIGLLAANSISEASTGFLQIPIMADPTVL
AVPESLDLGCVARIEDLAPEAQAILGASIQIAFGTQHSRRIESWFSDMLP
QNRMTARVRSFETALSMVRAGLGICIVPALSVGPSPGVRLYHAGLEPRRI
VALIQPAQHRTGRHAAVVAALQAAGSAMRLPPIEPLPALLSRP
>RSP_1286 cbbR, RuBisCO operon transcriptional regulator, CbbR
MVRLDAITLKQLRALVAVAGSASLTGGATRLGLTPPAIHSQIRNLEEAFG
VPLLHRPPETGSFTPTLAGIAVLEAAQRIEVILSQCSYQVMAVSEGRAGQ
VTLGVVSTGRYFAPRLVKMLSLACPEIRIALRVGNREQLIDDLARHMVDL
AVMGRPPRQPEVASVALGPHPHGIVAPPDHPLAGLAEVPVPDLLSQTFLA
REEGSGTRVLMSRYLDRLGEGQVVDLIEMDSNETIKQSVIAGLGLAFLSL
HVVMDELRFGQLVQLAAPGLPIERHWFLVHPVDRPLNPAALRVQGEIVKL
KGAYLPGAPA
>RSP_0122 cerR, transcriptional regulator, LuxR family
MDIIDLSTVATDDASFLDYIDQLCQKLGFDYASYATTSPMTGAVQGYANY
PDSWKMHYMRRNLHRVDPTIHKSALSIAPVDWSRFERDERFRAVFFAAED
FGITPQGLTVPVRGPYGDRGLLSVTRNCARPEWEKHKRAVIGELQVAAVH
LHDAVMRSDVISRALRQPRLSTREIEVLQWAAAGKSQTDIGDILGISHRT
VEVHLRSAREKLGTLSTVQAVGRAIGLGLVYPR
>RSP_2024 cspA, Cold shock protein cspA
MANGTVKWFNATKGFGFIAPAGGSKDVFVHISALERAGIRQLNDGQAVTF
DLETDRNGRESATNLALA
>RSP_2621 ctrA, two component transcriptional regulator, winged helix family
MRILLVEDDPTTSRSIELMLTHANLNVYCTDLGEDGIDLAKLYDYDLILL
DLNLPDMSGHEVLRQLRLARVDTPILILSGADDTENKIKGFGFGADDYMT
KPFHREELVARIHAIIRRSKGHAQSVIRTGKILVNLDAKTVEVEGKPVHL
TGKEYQMLELLSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKK
LAEATGGESYIETVWGRGYVLRDPVTTETDRRFAIGA
>RSP_0037 flgM, Putative FlgM, negative regulator of flagellin synthesis
MKEGHMVESVVPTPGPSRLERLKDTQTRVDRSLAGAATGSARASGETVEL
SAAALATPEELRSGPPVDLELVQKIKDAIAEGKYPVDLERITDALFADYL
DLKL
>RSP_2591 flhR, two component transcriptional regulator, LuxR family family
MGHVSGGIACAGAQRVPTRMIGDILIVDDHPLMCDALAMTLTHAFGLKRV
RSAASLAAAEKILREGPLPDAIVLDLNLPDVRGIEGVMSLQKLARSVPLT
VISAEVDAEMVTAAMAAGAQGYVSKSLPRPQMVEAFARMWTGEFVTPEEY
DADGAGEDGGEQMRELARSFATLTPQQMNILRLICQGRPNKLISYELSIA
EATVKTHIAAIMTKINVRNRTQAALLASKARIFAR
>RSP_0032 fliA, sigma factor FliA (Sigma-28 group, flagellar)
MIHARGYAEQTQTPERLVRAHMDLVRRIAWNLHARIGRKVEIDDLIQVGY
MGLVDASRRYEPREGVSFAAYAAIRIRGSIMDFLRSNSALCRTTILMQQK
VKAAVQRLEGRLMRAPETPEVAAELSMPVGEYQDWLAQFAGSQTASLDEV
YDDQSALFEGHDPSAEDRLQASQMRGLLRQALGRMPEREALLLQLIFVEE
LNVYEVGEILGVTTGRVSQIKKAAIERLRGLIDALQGEV
>RSP_0457 glpR, probable glycerol-3-phosphate regulon repressor
MALNFRQTEILEIARSEGRVVVEQLAEHFAVTLQTIRRDLTELSDAGLLD
RVHGGAVLRTGVSNIGYEERRRMNEAAKASIGRACARAIPDNSSMIINIG
TTTEAVARELLNHRNITVVTNNMNVANILATNPSCEVMVAGGQLRRSDGG
LVGDLTIQFIEQFKVDFAIIGASALDREGDMLDFDLAEVRVSKAILRQSR
QRFLVTDSSKLDRKAPVRLGSLEELDAVFTDSPLPEELARRCESWETAVT
VADQAIPSA
>RSP_1776 greA, Transcription elongation factor greA
MDKIPMTRAGFTALDDELKTLKTVERPAVIRSIAEAREHGDLSENAEYHA
AREKQSFIEGRIKELEAILSLAEVIDPAKLSGSIKFGATVTILDEETEEE
RTYQIVGEAEADIEAGLLNIKSPLARALIGKDEGDSIEVKTPGGERGYEV
VSVRFV
>RSP_1220 hrcA, heat-inducible transcription repressor HrcA
MNEGRRMLSEMNDRSREVFRRVVEGYLASGDPVGSRTLTRHMSEKVSAAT
IRNVMQDLEYLGLLDSPHVSAGRIPTQLGLRMFVDGLLEVGQVSEKDRER
IDSTFGGNEHDVVSLLDRVGATLSAVTQGASLVLAPKHEAAIRHIEFVSL
GADRALVVLVFADGHVENRVFRPPSGQTASSMREAANFLNALVEGRTLGD
LRQTIGQEITRRRQEIDALAHDLVQSGLAVWENPGEQSERLIVRGQSHLL
EGGAEAADFERIRTLFDDLERKRDIAEYLELTEAGEGVRIFIGSENKLFS
LSGSSLVVSPYMNADRKIIGAIGVIGPTRLNYGRIVPIVDYTAQLVGRLV
SDRGKG
>RSP_2932 hutC, Histidine utilization repressor, gntR family
MALGWEDIRAEVLRRIEARHWAPGTLIPTEEALAEELGCARTTVNRALRD
LAAAGLLERRRKAGTRVALHPVRRARFDIPVTRLEIEGRGQSYAFHLIEE
RRAEPPPAVASLFRSLPGVPLLRLRGLHLADNRPAIYEERWLDPAVLPEP
APDFRRISPNEWLVSHVPWTGGDIVFSAANASPEEADILGCAPGAALFLC
ERVTEAEGRPITSVRLLHAPGYRLRADL
>RSP_0506 hypB, NI2+-binding GTPase protein HypB
MCTVCGCGGNVTFEAGHRHAHGADGHSHHASFPHGHAGHHSHGTPGTGHA
HHHGLGPAGVSVPGMSQERLIEVETDILAKNNIYAMANRHRLRELGVHAV
NLVSSPGSGKTTLLCKTISLLAGAPLAVIEGDQQTSNDADRIRATGAPAV
QINTGKGCHLDAHMVGHAMEDLPLGAGAHLFIENVGNLVCPAAFDLGEDA
KVAILSVTEGEDKPLKYPDMFTAARLAILNKVDLAPHCDVDLDLYEANLR
RVNPLIEVLRVSARTGEGMEGWVKWLSARRTAKMLGARG
>RSP_1269 kdpE, two component transcriptional regulator, winged helix family
MTGPARILIVDDEPPIRRFLRVALEAEGHRVTEAASVREGIDRAALDAPT
LVILDLGLPDGDGIEVLRTVRGWSQVPVIVLSVRSDEAGKVAALDAGAQD
YVTKPFATSEFLARIRALLRDRSGPAAPSVISVAELEIDLAARRVSVSGT
EVKLTRREFDLLRLLASQAGRLVTQAMILRTIWGPAHEEDSQYLRVYIRQ
LRAKLGDDAADPRWIFTEPGIGYRFRGR
>RSP_1997 lexA, LexA repressor
MLTRKQMELLDFIKTRMDRDGVPPSFDEMKDALDLRSKSGIHRLITALEE
RGFIRRLAHRARAIEIVKLPEAMERAGFSARAAKAAAAPLPKGAVTVETA
GALDLPLMGRIAAGLPIEAINGGPQSVTVPGMMLSGRGQHYALEVKGDSM
IAAGINDGDIVVIREQQTADNGDIVVALVADHEATLKRYRRRGGMIALEP
ANDSYETQVYPEQMVKVQGRLVGLIRSY
>RSP_0927 lyrS, transcriptional regulator, LyrR family
MRAGSGQCTGAAMDRLTEMEAFAMVVDQGGFTDAARKMGISKSAVSKHVS
ALEARLGARLLNRTTRRVSPTEIGLAYYDRARRVLTDAGEADALVTSMQT
APSGHLRLSVATDFGVALLAPILAEFLLDYPDITVTMVLNNRSVELISEG
FDMAIRVGDLEDSSLRARKLTETTRRMIASPGYLQRHGRPMKIDDLTDHR
LLYHSTQAHGNVWRLLSPSGEPRQVRAPGFLTVNDGHSLLKAAVSGLGIA
HLPEFLFAEAMRAGLVEEVLPDLPVETLGIHAIYPAGRFTQPKVRAFIDF
LVRRFLEKGPIGN
>RSP_2171 metR, transcriptional regulator, LysR family
MHLELRHLRTIRAIHQAGGLARAADVLHMTQSALSHQVKGLEDQAGIELF
VRRSKPLKLSAAGIRLLRLAERILPEIDALEDEFRALRSGRTGRLHIAIE
CHACFEWLFPVLELFRHAWPEIDVDIRAGLAFEALPALMREEVDLVISSD
PVTVEGMVFNPLFDYHPTFVAAASNPLAAREFISAEDFRDQMLITYPVSR
DRLDVFTEVLTPAKVEPRGTRQVELTAVILMLVASNRGVSVLPDWVLRDV
RSHADYVTRPLGPKTVTKRLYAATRTEDATKPFMAHFLRLGRSEPVKLQR
A
>RSP_2850 mfd, transcription-repair coupling factor (helicase)
MQNGTRIFLGGAPEGYDARLVAKELDRGAPVIHVARDDKRLEAMRTALAV
MAPRAVVLELPAWDCLPYDRVSPNPEISARRMATLAALAHGMPGAFVLLT
TLNAATQRIPAREVLRAASFSARVGDRVDEGRLRSYLARMGFSLTDTVTE
PGDYAIRGGIVDIYPPGVAGPVRLDFFGDVLDGARRFDPETQRTVEKLDL
VELAPVSEVMLDEGAFTRFRQNYRIEFGAAGTDDPLYEAVSAGRKHQGME
HWLPFFHARLETLFDYLPEASVMLDDQVTPARISRWEGIADQYDARREAM
TAKGRLDTVYKPAAPDLLYLDEAAWEAAVAGHRVIQLSPLAQSPGPGVLD
AGGRMGRSFAPERQAENISLFGALVDHVRSLREDRQVVIASWSEGARERL
KGLLEEAGLQGTKLAQDIRDVPEARGGTHLMVWALEQGFTAPGLAVISEQ
DVLGDRLISKPKKRRKAENFLREHDTLTPGDLVVHVEHGVGRYMGLETLR
VPQPPSNKPGPPHDYLHLVYAEDAKLYLPVENIELLSRYGHEEGLLDKLG
GGAWQAKKARLKERIREIAERLMRIAAERHLRHAPILEAPHSLWEAFSAR
FPYQETDDQLSAIADVVKDLESGSPMDRLVVGDVGFGKTEVAMRAAFVAA
LAGMQVAVICPTTLLARQHFRSFAERFRGFPMKVHQLSRFVSAREAAETR
SGLADGTVDICIGTHALLAKGVKLKNLGLLIIDEEQHFGVSHKERLKEMR
SEVHVLTLTATPIPRTLQLSLTGVRDLSIIATPPVDRLAIRTYVSEFDTV
TIREALLRERYRGGQSFFVVPRLSDLPDMEAFLRDHVPEVSYVVAHGQLA
AGELDERMNAFYDGKFDVLLATTIVESGLDIPTANTMIVHRADMFGLSQL
YQIRGRVGRAKTRAYCYLTTKPRAPLTPQAIKRLRLLASLDSLGAGFNLA
SHDLDLRGAGNLLGEEQSGHIKEVGYELYQQMLEETIQKIRSGELQGLSE
PDEQWAPQINLGVPVLIPEEFVPDLDVRLGLYRRLSGLTTKVELEGFAAE
LIDRFGPLPREVNTLLLVVRIKAMCKRAGISRLETGPRGATVQFHNDKFA
NPAGLVDFIKAQGETARVKDNKIVLARDWKTEGERIKGAFAIARDLAEKV
VKPEKTPAKVARPAG
>RSP_2422 mgpS, putative ATP-dependent helicase, MgpS
MLGHRTGVIGLPLRLLAREVYDRIVAQRGPSVVALVTGEERIVPERTQYW
VCTVEAMPMEIGADFVAVDEIQLCGDPERGHVFTDRLLRARGLVETMFLG
SDVMRGAIAALVPHVTFLRRERFSTLSYAGSKKISRMPPRSAIVGFSVDN
VYAIAELIRRQKGGCAVVMGALSPRTRNAQVALYQNGDVDYLVATDAIGM
GLNLDIRHVAFSSTVKFDGRRMRPLFPHELGQIAGRAGRHTEAGTFGVTG
EASPLDEGVVDAIENHRFAPIQRLHWRNDRLEFGTVERLIASLEEPTSNE
WLSRARESDDLHALKALSEEPEVRARLHSPHEVRLLWDVCRIPDFRSIST
TEHVTLLARIFGFLCEGKVPNDWLAGAIARIDRPSGDIDTLSKRLAYIRT
WTYVAQRRGWVQDESHWREETRAVEDRLSDALHGALTQRFVDRRTSVLMR
RLKQKESLVAEVNDKGEVTVEGEFVGRLEGFRFRQDASNSPDEARTLRQA
AVQALRPEFHLRADRFYNSPDTEMDFTEQGGLMWGEQAVGKLIAGPEPMR
PQVEAFVDEDAGPEVAEKVRRRLQHFIDRKVAAQFEPLLAMSRDETLTGL
ARGFAFRLVESLGLIPREQVAEEVKSLDQEARSALRKHGVRFGQFTIFLP
LLLKPAPTRLRLVLWSLANGLQEFPESPPPGLVTIPHIADVPKMHYTLAG
YHPAGQRAIRIDMLERLADLLRAKDSRAGFEATPDMLSITGMTLEQFAGL
MQGLGYRAEPGERPKVKAAPAAAEAAPAEGEAPAEVPAEEAPAAEAPSAD
AEAAPDAPAEEPAAVEVESFYTFTWAPRRPDRGPRRHDRGQGEGRNRGPR
ATPGDAPAEGAAAEARPPRGDRPERQGHGHGGKPKGKGGKPDRKGADRNQ
PKSFESRPARSDRIDPDNPFAVLAALRDRS
>RSP_0736 mobC, MobC protein
MRIEVRQGLPPGQRRLAAELYWQAFGGKLDRVMGPEPRALAFLERVMRAD
HVLAAVDAEGRLLGLAGFKTPAGGFAGGTCADMRAVYGVWGGTWRVLMLR
ALQGDVDNERFLLDGICVARDLRSRGIGSALLEGICAEAVRRGYPAVRLD
VIDTNWRARALYERQGFIAIRSHRIGLLRYVFGFNAAITMVRPVAG
>RSP_0760 mucS, transcriptional regulator, MarR family
METGMTVHAGILDGTQKAFLLGYLESLSLVERLHRLLLDVVKDEFERIGL
LEINPVQALLLFNVGDNEVTAGELKTRGYYQGSNVSYNLKKLVELGYMHH
QRSEIDRRSVRVRLTDKGRHVRQVLSDLFARHAEGLERRNVVGVSGMEDL
NQALRRMERYWTEQIRYIY
>RSP_0547 nifA, NifA transcriptional activator
MDTSAARSGAVAERGEEYLTLDALCEIAKLLTGASDPIACMPAVFGVLGA
FMGLRHGALALLQEGAQAETQRNARHVNPYVIAATASGVPPAGAEARAIP
AQVARHVFRNGVSLVSCDILEEFGAEALPPGLGDSRQALVAVPIRDQANS
PFVLGVLCAYRSLKDNGARYLDTDLRVLNMVAAVLEQSIRFRRLVARDRD
RIVQEAREAIRVAAEATAGPPVEAPAEALEGVIGSSPAIQRVIGQIRKVA
GTHTPVLLRGESGTGKEVFARALHALSERRDKAFIKVNCAALSQSLLESE
LFGHEKGSFTGAVQQKKGRFEMAEGGTLFLDEIGEISLEFQAKLLRILQE
GEFERVGGTRTLRVDVRLVTATNKDLERAVANGTFRADLYFRICVVPIVL
PPLRDRKEDIGLLAQGLLERFNKRNGMKKKLHPSAVAALAQCNFPGNVRE
LENCIARVAALSPETVIHADDLACHHDHCLSADLWRLQTGSASPVGGLAQ
GPLELPVLGSRPPAAAPSAPPPPPPTVPSAPLDGEAAEREALIEAMERAG
WVQAKAARLRGMTPRQIGYALKKYNIRVEKF
>RSP_1163 nusA, N-utilization substance protein A
MAITSANQLELLQTAEAVAREKMIDPDLVIQAMEESLARAAKSRYGSDLD
IRVKIDRKTGRATFARIRTVVEDELIENHHAQVTVKQARSYLADPKIGDE
IIDEVPPVDLGRIAAQSAKQVILQKVREAERDRQYDEFKDRKGTIINGVV
KREEYGNIIVDIGRGEGILRRNEKIGRESYRPNDRIRAYIKDVRREARGP
QVFLSRTDPQFMAELFKMEVPEIYDGIIEIKAVARDPGSRAKIAVISYDN
SIDPVGACVGMRGSRVQAVVNELQGEKIDIIPWNQDQATFLVNALQPAEV
SKVVIDEEAGKIEVVVPDEQLSLAIGRRGQNVRLASQLTALDIDIMTEAD
ESARRQAEFAERTNLFMETLDIDEMMAQLLVSEGFTNLEEVAYVDPEELL
SIDGFDEDTAAELQARARDHLEEANRKALESARALGLEDSLAGFEGLTPQ
MLEALAKDGIKTLEDFATCADWELAGGWTTVNGQRVKDEGVLEKFDVSLE
EAQHLVMTARVMLGWVDPTELAPEAEEEEETEGEA
>RSP_0755 nusB, putative N utilization substance protein B
MKPDRRQMKSASRLYAVQALFQMETTGQTVEQVAREFETHRFGAVYEGDE
MAEGDAKSFRAIVSGAVNRQAGIDQMTDRALVAKWPIDRIDPVIRALFRA
AGSELLESETPPKVVINEFVDIAKAFFPEGREPKFVNAVLDHMAREARPE
AFPQG
>RSP_0869 osp, response regulator receive protein
MHVLIVETRAELASQWAERLRRDGITVHITHSQECAVRVLCAHRIQVVML
DLMLDEGSALAVADFAAFRQPWAKVMFLTDSAVFSDGSIFTHCQNACGYF
AISTPVSDLATIVEHYVHAA
>RSP_2780 oxyR, Transcriptional regulator, OxyR, LysR family
MRLTLRQLSYFLALAEERHFGRAAERVHVSQPALSMQIREMEETLDAVLF
ERHPREVRLTAEGREVELRARRILAEVTELEAAARQRGLAQRVNLGVIPT
VAPYLLPEVLPLLRARDISRDLRVREATTDILLSALDRGQIDAAVIAAPQ
AVAGLKLVPLFSDRFLLAGRESMLSAAGTEALRPVALDPDRLLLLDEGHC
LADQALEVCGMDRRQARLDLGASSLTTLCGLAGQGLGMTFLPEIAWRQER
AAAPGLAVRRFSTPEPARQIMLARRAASSASDWFEDLARMLAQAGETLTG
LARAAVPA
>RSP_1034 pdhR, Pyruvate dehydrogenase complex repressor
MPFQKIQSEKLSQSVMRQIELLILRGILRPGERLPSERDLSERLGVSRPS
LRDAIAELQERGLLVSRPGSGIFVAEVLGSAFAPALVELFASHEEAVFDY
IDFRRDLESLSAERAAVRASDTDLKVIDTIFRKMEAAHLKRDPSDEAALD
AQFHMAIIEASHNVVMLHMMRSMFDLLRNGVFYNRQMMFRQRTTRESLLD
QHRRINAALQARDPQEARAAVETHLSYVEKAVTEGLRSERHEAIARQRLE
HERNR
>RSP_2599 phoB, Phosphate regulon transcriptional regulator, PhoR
MSPADQPVVLLVEDEPAQREVLSYNLESEGFRVVQAGNGDEALMLVEEAG
PDVIVLDWMLPSVSGIEVCRQLKSRPSTRSVPIIMLSARSEEVDRVRGLE
TGADDYVVKPYSVVELMARVRSQLRRARPSSVGLTLEFEDIRLDPETHKV
HRGAQLLKLGPTEFRLLSTFMEKPGRVWSREQLLDRVWGRDIYVDSRTVD
VHVGRLRKALCLHGGEDPVRTVRGAGYALG
>RSP_0573 phoB, Response regulator receiver protein
MADGARKRRILVVEDEDNIAIALDYLITREGYEHDRVASGAEALGRIRST
HPDLVLLDVMLPEVSGYEICQGVRLDPTLAHVKILMMTARGSAIERKKGL
ALGADGFISKPFELKALREEVRRLLGEGG
>RSP_1518 prrA, PrrA (RegA), Response regulator involved in oxygen regulation of photosynthesis genes
MAEDLVFELGADRSLLLVDDDEPFLKRLAKAMEKRGFVLETAQSVAEGKA
IAQARPPAYAVVDLRLEDGNGLDVVEVLRERRPDCRIVVLTGYGAIATAV
AAVKIGATDYLSKPADANEVTHALLAKGESLPPPPENPMSADRVRWEHIQ
RIYEMCDRNVSETARRLNMHRRTLQRILAKRSPR
>RSP_1577 putR, Proline dehydrogenase transcriptional activator
MAGSKLDPIDRHILAELQSDGRMTNVELAKRVGISAPPCLRRVRTLEEAG
YIRGYHADIDPRELGFEVQVFAMVRLHSQAEADLSAFESRCRAWPLVREC
HMLNGEIDFILKCVAPDLPSFQSFLTQELTAAENVASVKTSLVIRCAKDE
PGVPFEVLEARLQRSA
>RSP_2165 putR, transcriptional regulator, AsnC family
MQLELDRFDHAILRVLAADGRVSATELARRIGLTKSPTQARMKRLEAAGV
ITGYGARLDPIRMGLAHVAFVEVKLSDTRESALQAFNRAVLAVPEVEECH
MIASRFDYLLKVRTADIQDYRRVLGEKLSTLPFVASTSTHVAMESVKEAR
G
>RSP_2623N recG, Haem peroxidase
MSRPEILFPLFADLETLEGVGPKSAKAFAGLGVTRPKDLLFLLPHSAVDR
SRRSSIRDVLPPVTATVEVTVGAHYPSRRKGGPYRIAVRDAEAEFTLVFF
HARGDYLMKLLPPGEQRIVSGRIEVFDGMAQMVHPDHVLPPEEAAALPAC
EPVYPLTAGLTQKLVAKAASAALLRLPELAEWIDPGLKAREGWPDWAAAV
RAAHAPEAPAEVTPTAAARRRLAYDELFAHQLTLTLARASRRRGRGVASV
GTGALQRRVLESLPFAPTAAQTRAVAEIAADMAAPQRMNRLLQGDVGAGK
TLVAFLALAIAVEAGGQGVMMAPTEILARQHLASLAPMAEAAGIRLALLT
GRDKGAERAAKLAALAAGEIGVLVGTHAVFQKDVIFHDLRLAIVDEQHRF
GVAQRMELGAKGAAADVLVMTATPIPRSLALASYGDMDVSVLDEKPPGRT
PVKTALVSCERIDEVVASLAHAVAEGRQAYWVCPLVEDSEAVDYASAEAR
FQHLRAALGEGTVGLVHGQMPPAEKDAAMARFVAGETRVLVATTVIEVGV
NVPNASIMVIERAEIFGLAQLHQLRGRVGRGAAQSTCLLLYQAPLAESGQ
RRLTILRETEDGFRIAEEDLAIRGAGDLIGTAQSGLPRFRIADLERQSAL
MEVAQSDARKLLHDDPTLASPRGEAARLLLWLLDQDRAIRLLSVG
>RSP_2536 rhlE, ATP-dependent helicase, DEAD-box
MLMTKFSDLALDPRVLKAVQEAGYETPTPIQAQAIPHALEGKDVLGIAQT
GTGKTASFTLPMITILGKGRARARMPRSLVLCPTRELAAQVAENFDIYAK
HSKLSKALLIGGVSFTEQDKLIDRGVDVLIATPGRLLDHFERGKLLLTGV
QIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLFYSATMAPEIERITNT
FLTGAVKIEVARQATTSETIEQKLIQVTPTRKERSFADKRAVLRALIRAE
GEACTNAIIFCNRKMDVDVVAKSLKQHGFNASPIHGDLEQSQRMKTLDGF
RDGSLHLLVASDVAARGLDIPAVSHVFNFDVPTHPEDYVHRIGRTGRAGR
KGKAYTIAVPSDEKHVTAIESLVKQAIPRGELPEGFSLEDRPDRPERDNA
RGERSERPARGRRGRDRDRREEPRVEAVEAPAAAVPEVREVREERPPRRE
ERRDERREGGNNRRERDRDRREERVVGMGDHVPDFLLRSFRIPSLTASDE
EEPVPEAAEEMLAGDGEA
>RSP_0819 rhlE2, DEAD/DEAH box helicase
MPAHRKRPMADFSTLGLSERLMQGLAKAQFTQPTPIQVEAIPYVMQGRDL
MGLAQTGTGKTLAFGLPLLHRLLGVGHPPPPRTIRALILAPTRELVTQIA
TNLELFTKGTPVKVVTITGGASINRQTERLARGADIMVATPGRLIDLLDR
NAVVLDHTGYLVLDEADQMLDMGFIHSLRKIARFLPLKRQTLLFSATMPK
LIEELAHTYLREPVKVQVAPPGKPVEKIAQGVHFTPQGDKAKLLESYLQK
HPGEQALVFGRTKHGSEKLMKLLVSWGFKAGSIHGNKSQNQRDRTLTEFR
DGSLDVLVATDVAARGIDIPGVRHVYNYDMPNVPENYVHRIGRTARAGAE
GSAVAFVAPAEMEEFRAVEKLLKQPIPVIGGAPWAADIVAAAPRPGQKPR
QGGRPKTGAKPQGKPQAKAQPKPQGAAKAHPRAGRPAGAPGGHAAPKRAA
RGPRRGDAARG
>RSP_1231 rho, Transcription termination factor rho
MNERLNLADLKAKTPADLLAMAEEWEIENAPSMRKGEMMFSILKEHAEEG
YEVGGDGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPEILRQFSLRTGDT
IEGVIVAPRENERYFSLTRVTKINFDDPERARHKVHFDNLTPLYPDERLK
MEVDDPTMKDRSARIIDLVAPIGKGQRGLIVAPPRTGKTVLLQNIAHSIA
TNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHVAVAEMV
IEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQR
PKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLD
RKVADKRVFPAMDILKSGTRKEDLLVDKSDLQKTYVLRRILNPMGTTDAI
EFLISKLRQTKSNAEFFDSMNT
>RSP_1675 rnc, Ribonuclease III
MKLSADLKAFEGRIGHQFREPERLLRAVTHSSLSSVTRSDNQRLEFLGDR
VLGLVMAEALLAADRAASEGQLAPRFNALVRKETCAAVAREVALGDVLKL
GRSEMMSGGRRKEALLGDALEAVIAAVYLDAGFEAARQLVLRLWGARIAQ
VERDARDAKTALQEWAQARGLPPPTYEAVDRSGPDHAPIFTVEVRLGNGE
TDRAAAGTKRVAEQAAARALLARMEARHD
>RSP_1126 rnr, Exoribonuclease R
MDQLPSKAQILDWIAQNPSLSAKRDIVRAFGIKGSAARIELKRLLREMEA
EGALEKRKRTFTPQGALPPVSVLEIVGSDAQGDLFARPLEWAGEGEPPRI
LFVAKKGDPALAQGERILARLTEVEGEDEGHTHEARLIRRLGGSKPKILG
IFRASDDGGRILPIDKGEDKEWRVARDGAAGARDGELVEAEQAGPRRLGL
PLARITARLGDPAGPRAVSLIAIHQHGIPDSFPDAVLAEAEAAGPAPMAE
REDLRHLPFVTIDPVDARDRDDAVLAEPDPDPQNPGGHILWVAIADVAHY
VRPGSALDREARRRGNSTYFPDRVVPMLPDALSGDLCSLHQEVDRPCMAV
RMRLSAQGEKLSHRFTRGMMRSRASLNYAQVQKAQDGEPDETTAPLLETI
IRPLYEAYAALKQARALRQPLELDLPERRIELSDEGRVLSVAFRDRFDAH
RLIEEFMVLANVAAAEELVRLRRPLLFRVHEEPSADKLEALREVAEASGF
TLAKGQVLKTAHLNRLLAQAQGTEFDELMNITTLRSMTQAYYHPENFGHF
GLALRSYAHFTSPIRRYSDLIVHRALILGHGWGDDGLSAQDIEMLEETAK
QISDTERRSMAAERDTTDRYLASWLSDRVGAEFTGRISGVQRFGLFVKLD
ESGADGLIPIRSVGREFFHFDPESQTLMGSDTGLVLGIGQRVTVRLAEAV
PLTGGLMLELLTVEDRGLPAPKRRRGRSAPRKPGREAAKAGKVKRRVLRT
RR
>RSP_1739 rpoA, RNA polymerase, alpha chain
MIHKNWAELIKPTQLVVKPGADPARVATVIAEPLERGFGLTLGNALRRVL
LSSLQGAAITSVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSIKMEVEGP
KRLSISAKGPGVVTAGDISESNGIEILNKDHVICHLDEGADVFMELTVNT
GKGYVAADKNRPEDAPIGLIPIDAIYSPVKKVSYEVTPTREGQVLDYDKL
TMRIETDGGLTPDDAVAYAARILQDQLSIFVNFEEPESATRHDVEDGLEF
NPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPENIEDLAKRFEDQF
>RSP_1699 rpoB, DNA-directed RNA polymerase, beta subunit
MAQSYVGQKRIRRYYGKIREVLEMPNLIEVQKSSYDLFLKSGDGPKAADG
EGIQGVFQSVFPIKDFNETAVLEFVKYELEKPKYDVDECQQRDMTYAAPL
KVTLRLIVFDVDETTGARSVKDIKEQDVYMGDMPLMTANGTFIVNGTERV
IVSQMHRSPGVFFDHDKGKTHSSGKLLFACRIIPYRGSWLDFEFDAKDIV
FARIDRRRKLPVTTLLYALGMDQEGIMDAYYETVNFKHQKNRGWVTRFFP
ERVRGTRPTYDLVDAATGEVILKAGEKATPRMVKKWIDEAQITELLVPFD
HIVGRYVAQDIINEETGEIWVEAGDELTMEYDRDGEVKGGTLKLLLDQGI
TDIPVLDIDNVNVGPYIRNTMAADKNMGRDTALMDIYRVMRPGEPPTVEA
ASNLFDTLFFDSERYDLSAVGRVKMNMRLDLGKPDTQRTLDRDDIIACIK
ALTELRDGKGEIDDIDHLGNRRVRSVGELMENQYRVGLLRMERAIKERMS
SVEIDTIMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEVTHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLATFAR
VNKYGFIETPYRKVVEGAVTDDVVYMSATEEMRHTVAQANAQLDEEGRFV
SDLISSRKAGEFMLNPPDAIDLIDVSPKQLVSVAASLIPFLENDDANRAL
MGSNMQRQAVPLLQSDAPFVGTGIEAVVARDSGAAIMARRAGVIDQVDAT
RIVVRATEMLEPGEPGVDIYRLRKFKRSNQSSCINQRPLVKVGDVVHRGE
VVADGPCTDMGELALGRNVIVAFMPWNGYNYEDSILISERILRDDVYTSI
HIEEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVQPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEV
RVFNRHGVDKDERALQIEREEVERLARDRDDELAILERNIYSRLRTLIMG
KTAVKGPKGIRAGSEINEDLLSTLSRGQWWQLALGEEADAKEVEALHEQF
EAQKRALDHRFEDKVEKVRRGDDLPPGVMKMVKVFVAVKRKLQPGDKMAG
RHGNKGVISKVVPIEDMPFLADGTHVDLVLNPLGVPSRMNVGQILETHMG
WAARGLGIKIDEALQDYRRSGDLTPVKEAMRLAYGDETYEGAFGDREDED
LVEMAGRVTKGVPIATPVFDGAKEPDVNDALRRAGFDQSGQSIVFDGRTG
EQFARPVTVGVKYMLKLHHLVDDKLHARSTGPYSLVTQQPLGGKAQFGGQ
RLGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKMYESIVKGEDNFEAG
VPESFNVLVKEVRGLGLNMELLDADEE
>RSP_1712 rpoC, RNA polymerase I subunit A,
MNQELSTNPFNPVAPVKTFDEIKISLASPERILSWSYGEIKKPETINYRT
FKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVR
RERMGHIELAAPVAHIWFLKSLPSRIGLMLDMTLRDLERILYFENYVVIE
PGLTDLTYGQLMTEEEFLDAQDQYGADAFTANIGAEAIREMLSAIDLEQT
AETLREELKEATGELKPKKIIKRLKIVESFLESGNRPEWMILTVLPVIPP
ELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKR
MLQEAVDALFDNGRRGRVITGTNKRPLKSLSDMLKGKQGRFRQNLLGKRV
DFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQA
KKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAI
QLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNVLSPANGA
PIIVPSQDMVLGLYYTTMERRGMKGEGMAFSSVEEVEHALAAGEVHLHAT
ITARIKQIDEEGNEVVKRYQTTPGRLRLGNLLPLNAKAPFELVNRLLRKK
DVQNVIDTVYRYCGQKESVIFCDQIMGMGFREAFKAGISFGKDDMLIPDT
KWPIVNEVRDQVKEFEQQYMDGLITQGEKYNKVVDAWSKCSDKVAGEMMA
EISAVRYDDAGAEKEPNSVYMMSHSGARGSPAQMKQLGGMRGLMAKPNGE
IIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDV
AQDCIVRTHDCGTENAITASAAVNEGEVVSPLAERVLGRVAAEDILVPGS
DEVIVARGELIDERRADLVDQANVASVRIRSPLTCEAEEGVCAMCYGRDL
ARGTLVNIGEAVGIIAAQSIGEPGTQLTMRTFHIGGIAQGGQQSFLEASQ
EGRIEFRNPNLLENANGEQIVMGRNMQLAIIDEAGQERATHKLTYGAKVH
VKDGQTVKRATRLFEWDPYTLPIIAEKAGVARFVDLVSGISVREDTDEAT
GMTQKIVSDWRSTPKGGDLKPEIIIMNPETGDPMRNEAGNPISYPMSVEA
ILSVEDGQTVRAGDVVARIPREGARTKDITGGLPRVAELFEARRPKDHAI
IAENDGYVRFGKDYKNKRRITIEPVDDTLNSVEYMVPKGKHIPVQEGDFV
QKGDYIMDGNPAPHDILRILGVEALANYMIDEVQEVYRLQGVKINDKHIE
VIVRQMLQKYEILDSGETTLLKGEHVDKAELDEVNQKAMDHGMRPAHAEP
ILLGITKASLQTRSFISAASFQETTRVLTEASVQGKRDKLVGLKENVIVG
RLIPAGTGGATSRVKKIAHDRDQKVIDTRRAEAESAAALAAPTDGVIDLG
SEDSGLVETVENREE
>RSP_0395 rpoD, RNA polymerase sigma factor RpoD
MAVKDTDDGKPEDQDAETSLDMSQAAVKRMIAEARERGYITYDQLNTVLP
QDQVSSEQIEDVMAMLSEMGINVIENEEAEEGEPAGELVEQGSGSREIAV
AGTQGETLDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRNTMIAG
LCESPLTFQAITIWRDELLSEDILLRDVIDLEATFGRSLDGDGDDEIDGP
EIDEVEVAAAPAPAPRRSTSSEPELDADGNPISRAEEEDEDDEASAMSLA
AMEAALKPRVLETLELIARDYGKLAEMQNRRMSATLNDHIRFTTEDEAAY
QKLRSEIVLLVNELHLHNNRIEALIDQLYGINRKIMSINSAMVKLADAAR
INRREFIDEYQGYELDPMWAERMAAKSGRGWQTLMEKSRDRVEDLRGEMA
QVGQYVGVDISEFRRIVNQVQKGEKEARQAKKEMVEANLRLVISIAKKYT
NRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIAD
QARTIRIPVHMIETINKLVRTGRQMLHEIGREPTPEELAEKLQMPLEKVR
KVMKIAKEPISLETPIGDEEDSQLGDFIEDKNAILPLDSAIQENLKETTT
RVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKAL
RKLKHPSRSRKLRSFLDQ
>RSP_1092 rpoE, sigma24, RpoE
MTDKSDRTDWVALMRAIRDHRDEAAFAELFQHFAPKVKGFLMKSGSVASQ
AEECAQDVMATVWQKAHLFDPSRASVATWIFTIARNRRIDGLRKDRQPEP
EDLFWGPDSEPDQADVYEMQQENARLGRAIARLPEAQRALIERAFFGDLT
HRELAAETGLPLGTIKSRIRLALDRLRQHMS
>RSP_2681 rpoE, sigma factor, RpoE
MTDQTPPRSIIPDVVDLIPALRAYARSLSRNQSDADDLVQETLLKAIANV
DKFQPGTRLRAWLFTILRNTFYTRIRVSARERTGAADCVSGEMSVQPSQE
WTVRGRELMAAIDRLPPHYREILILVVMLGESYEEAARICDCAIGTVKSR
VSRARQLVMNDLEGTGEA
>RSP_2410 rpoH1, sigma factor RpoH1 (Sigma-32 group, heat shock)
MSTYTSLPAPSPEQGLNRYMQEIRKFPLLEPEEEYMLAKRWVDHQDNRAA
HKLVTSHLRLAAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFR
LATYAMWWIRASIQEYILRSWSLVKLGTTSAQKKLFFNLRKAKAKLGALE
EGDLRPENVAQIAKDLGVSETEVIDMNRRLSGSDASLNATIGSDGEGSTQ
WQDWLEDEDSDQAADYAERDELEIRRELLAQSMSVLNDREKDILVQRRLT
DDPVTLEELSEGYGVSRERIRQIEVRAFEKLQAKMRELARSKGMTIPA
>RSP_0601 rpoH2, sigma factor RpoH2 (Sigma-32 group
MALDGYTDQTMSRQAMRAELLDAETELRLAYAWRDQRDERALHRLITAYM
RLAISMASKYRRYGAPMNDLIQEASLGLMKAADKFDPDRGVRFSTYAVWW
IKASIQDYVMRNWSLVRTGSTSSQKALFFNMRRVQARLEREASQRGEALD
AHQLREMVAHDVGVPLSDVEMMEGRLSGSDFSLNATQSADDEGREWIDAL
EDDSAQAAEVVEGSLDAARLRGWLVSAMQQLNARERFIVTERKLRDVPRT
LESLGEELKLSKERVRQLEAAAFAKMRRSLEAQSREVHHFLL
>RSP_0527 rpoN, sigma-54, RpoN
MDMMQFQRQTTQLAMTQRMQESLRILQMSNADLADYLTAQALENPCLEVR
VPEGASVAPALPSRGIQAGLDRDAFATVEGQPPSLLAHVEAQIDLAFFDP
GDRRTALAFAEALEPSGWLGQPVSEVAAAAEVEEEEALVILERLQALEPA
GLFARSLAECLALQLEDLGLLTWELRTMLDHLPLLAEGRIADLARRCDCE
PEHIRENLALIRSLSPKPGEAFAADRTPIQPPDVRVLRGPEGWEVELTRA
QLPRIRVSEAGDTGDRQADAWLARARSQARWLERAVERRQATLLRTAVCL
VRHQADFLDQGPRALRPLSMEEVALELDLHPSTISRATATRLIETPRGLI
PLRAFFSRSVSSDGPEAPQSQDALMALVREIIAREDRTKPFSDDAIVKQA
KLAGAVLARRTVTKYRETLGIPSSYDRKRAAAAA
>RSP_0068 rpoN2, Sigma-54 factor (RpoN2)
MGMTPGMQLYTAQSFAQRQSLVVTAQLQQAICLLQMPNAELSSFIESQSE
ENPFIELRLPPAPVPSAPLGKTAPEDWDRVAGLAADPGPSLYVHVAAEIA
RLGFDAPQAAAAQVFLDALEPWGWLGRPMEELAFRAGLSLEAAEALLARL
QKIEPAGLFARTLAECLQLQAEEQGLLTPLFAAVLAHLPLLAAADLKGLC
RACGCGMEDLKAVLRSLRGLNPKPGALFDAAPPPQRPPDLVVSRGAEGWR
VDLNRSTLPSVVVRSDAAEGFARTAAPYVGERLSVAKWLARAVEHRNQTT
LKIGAEVVRRQRGFLEEGLARMAPMTLREVADAVGVHESTVSRVSSGLMI
ATPQGTFPLKSFFTAALAAREGDTAGSAAAVRHRVRQLVQAESPDDPLSD
DAIAKIISDEGVTLARRTVAKYREQLNIPSSVQRRRQAIVTGAL
>RSP_2867 rpoN4, Sigma-54 factor family protein
MVSMQLRLGQRLAQRAVLVQRAEILEATGTDWAERIAAEAQRNPFLRVRQ
PATAAPIPESAALPPDLHAWLGSQIRMAMADPEDRALAFRLLEALEPSGW
LGQPLSRLAPGAEEQAARVLHRLQQMEPAGIFARDLRECLMLQARDRGQL
DPAMAAVLDRLDCLASDGPAAVARAAGLEEQTVLRCLELIRRMDPKPGAA
FAAEDAPLREPDLIARRTASGWSVELNRSLLPEVRVAPLPDGSPADVRQM
HQEALSLAKATGLRGRTLLAVGALVVERQRAFLDEGPAALVALGIGEAAD
ALALHPSTISRTVTGLLMATPRGLVAVRDLFCARLAEGTGALSAPALQAL
IRETIAAESAHAPLEDGEIVEALARRGIHVARRTVAKHRTLAGLPPAAVR
RRAAPSGSEAVAFGRQPVPLGGRN
>RSP_1669 rpoZ, RNA polymerase omega subunit
MARVTVEDCVDKVPNRFELVMLAAHRAREIASGSSLTIDRDNDKNPVVAL
REIAEETQSAESLRERMIESHQTQIEVDEPEEDQMALLMGSEVDRPVQDD
MSEEKLLRALMEAQGQN
>RSP_0090 smoC, Operon regulator SmoC
MIDRPESEPTPLDDAARAGWLYYVAGLTQDQIARELGTSRQRAQRLVSRA
ISERLIHVRLEHRVSGCLHLEAALIRRFGLKLARVAPSLGSEVDPLPSIA
PTAAAEVERVLRSERPMVVAFGTGRSLRATVEEMTSMVCEQHKIVSLNGN
ISADGSASYYDVIFRIADRVRAPHYPMPMPVIAQDAAERELFHALKPVQS
VLRLARNADVTFVGLGQMGEDAPLLKDGFITPDELAEMQELGAVGEVAGW
VFDSEGRYLETSINQRVAGVRVELSEDRTVVAIAGGRRKLAALHAGLRGR
LFNGLITDELTAQALLS
>RSP_1225 spo0J, ParB-like partition protein
MMEKKMERRGLGRGLSALMADIQVEVDAGQGAARRPDLLVPVEKLMPNPN
QPRRDFGPEALEDLAASIRQKGVIQPLIVRPMPDGDRYEIVAGERRWRAS
QLAQLHEVPVIVREFDDTEVLEVAIIENIQRADLNAIEEAMGYRQLMDRF
GHTQEKLAEALSRSRSHIANLLRLLQLPDDVQAWLREGKLTAGHARALIT
TPNASDLARQVISRNLSVRDTERLARGAGEKRKPSAPRGGREKDADTRAL
EADLSANLKMAVTIDHEPGGENGRLTIRYNTLDDLDTLCRTLSVMPRDGS
I
>RSP_1670 spoT/relA, RelA/SpoT family protein
MIDVEDLIALVRNYNPRTNADLIRRAYAYGRQMHEGQFRHSGEPYFTHPV
AVAAILTEQRLDDATIVTALLHDTIEDTKSTYTEVARLFGEDIAELVNGV
TKLTNLELSSAQSKQAENFRKLFMAMSKDLRVILVKLADRLHNMRTIKSM
RPEKQAQKARETMEIFAPLAGRMGMQWMREELEDLAFRVLNPEARNSIIR
RFITLQRETGDVVHKITADIRLELEKAQIEADVYGRAKKPYSIWRKMQEK
DLAFSRLSDIYGFRVICKDVADCYRILGVIHQRWRAVPGRFKDYISQPKS
NGYRSIHTTVSGRDGKRVEVQIRTRQMHEVAEAGVAAHWSYREGVRVHNP
FAVDPARWIASLTERLDEDDHDEFMENVKLEMYTDQVFCFTPKGDVIQLP
RGATPLDFAYAIHTRIGHSTVSAKVDGIRVPLWTRLKNGQSVEIITAEGQ
RPQASWIDIVTTGRAKAAIRRSLREEDRGRFVKLGQELVRAAFDHVGRKA
TDKALRTAAKMLGLSDETELLAQLGSAELTARKVVETLYPELVRSSGPEV
DMQRPVVGLSDDQQFRRAKCCQPVPGERIVGITYRGQGVVIHAIDCPALE
EFEEQPSRWIDLHWHAGRHAPVHTVTLDLTISNDAGVLGRICTLIGEQKA
NISDLRFTDRKPDFYRLLVDVDLCDVEHLHTLMTALEAETDVAQISRHRD
LSRKP
>RSP_2801 tetR, transcriptional regulator, TetR family,
MPAETRKRLLDAAELLSRTVGPAGMSLDAVAATAGVSKGGLLYHFPSKHA
LLRALVQNHVTAFRDDMDGRCPGWTEPSDEAAALAGARTYVDVARETMRQ
TDAPSSGIFAALTEDPHFMTPLLDLRDVVRRLFERCPPEAMLVFHGCEGL
FHERMIDPTRWDGERAEAQFLRMARLLEELAEGRARFLS
>RSP_0302 ureG, Urease accessory protein G
MSHGPLRVGIGGPVGAGKTTLTEKLCAALAHRCSMAVITNDIYTREDAEA
LMRAQVLPAERIRGVETGGCPHTAIREDASINLAAVADLRRTFPDLDLIL
IESGGDNLAATFSPELADLTIYVIDTAAGQDIPRKRGPGLARSDLLVVNK
IDLAPHVGVDLARLEADTQAARGQRPYVMARMRAGVGVEAIVAFLEREGG
LQLLPQD
>RSP_1181 xylR, xylose operon repressor
MRRQVRKRSAPDPTVGCGPLIPPLVESARPLRQQVFERVRAAGLTARVQV
ARDLSVSPASVTTIVSELIEAGLIEEVATRREGESGRGRPVVALGVRAAA
HRVVGLKISDRDLSAVVMDFAGHLLAEHHEERSPAALPPDRILSLIETLL
DRVTTKAGLTRQELSAVGIGLPGYVDSAGGRVLWSSILSERNVPLGRLVT
ERLGLPAQIDNDANLCAMAELWFGAGRRLSDFVVVTIEHGLGMGMVTNHR
IFRGARGIGMELGHTKVQLDGALCRCGQRGCLEAYVADYALAREATTALN
WTHRQTQSTAVLLESLHDHAKAGNQAARSIFRRAGRYLAVGLANVVNLVD
PPLLILAGARLRFDYLYAEETLAEMNALVLETGRPLPEIEIHAWGEMLWA
HGAAALALSALGERLLALPREGVAQ
>RSP_0925 yobR, Putative acetyl transferase
MTPEDIYATVEATWPAARLERSGPWTIREGRGGGKRVSAATAAEGWTEAD
LPAAEAAMEALGQEPLFMIRAGDEPLDAALAARGYRIVDPVTAYACPVGR
LSAEPPAQMAAFPHWPPLGIVRDLWTESGIGPERVAVMERVAGPKCCLLG
RQNDRPSGAAFVGLAGPFAMLHALEVTPALRRLGSAQAMIRRGACWAEAA
GAHWFSLVVTTANAPARALYEALGMEEVGHYHYRLK