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# Nitrosospira multiformis ATCC 25196, ATCC 25196

>Nmul_A1397 putative transcriptional regulator
MNRIGKIKHNVSMTKDQSKRSSCPVSCALDILGDKWTLLVIRDILFKDKQ
HFRDFLASPEKIASNILSDRLKKLEECNIISRQRDPLNARRVIYTLTEKG
KDLSPALHALIHWGAKYDPESNKQPCSMRHTGRMSET
>Nmul_A0165 transcriptional regulator, LuxR family
MDWVGKGKTNAEIGSILSISEFTVRNHLYHIFQKLGVYNRTQAASKVAQT
WGMRSEQHINGAPDTLFPQTNNPPLAGEL
>Nmul_A1739 transcriptional regulator, LysR family
MNFQQLRIIHETVRQNYNLTEAANALFTSQSGVSKHIKDLEDELGVELFV
RKGKRLLGLTNPGKELIEIVERILLDAKNVKRLAEQFSKRDKGRLTIATT
HTQAQYALPTVVTQFKKTFPQVHLVLHQASPGEIVSMLLDGVADIGIATE
ALESVAELASFPYYSWHHAVIVPPGHPLEAIQPLTLEGIAEFPIITYHEG
FTGRAGIDQTFAGAGLVLDIAMSALDADVIKTYVELGLGVGLVASMAFNP
VRDTRLTLLDSSHLFGQNITHISIRRGHYLRGYAYRFIELCLPSLTEAAI
RAGVRPRAGVELGD
>Nmul_A2182 phage transcriptional regulator, AlpA
MVQAILRLPAVKAESGASRSTIYLRIQQGLWPKPVRLGPRSVGWPASEVA
AINAARIAGKTDDEIRELVAKLEAARKTAGKAL
>Nmul_A0840 cold-shock DNA-binding domain protein
MATETGIVKWFSDDKGFGFITSDEGGKDLFAHFSSIVGEGFKTLQEAQRV
TFDVVSGPKGLQASNIRPQ
>Nmul_A0498 sigma 28 (Flagella/Sporulation)
MMNQQEYTDEEELFEKEDSLEQDDEAADTPSSAITDTSNDFLLTDVTQIY
FNEIGHNALLTPKEEAELTRRVRQNDFAARQKMIECNLRLVVNIAKHYTN
HGVALLDLIEEGNMGMMHALDKFDPERGFRFSTYATWWIRQNIERCIMNQ
SRTIRLPVHVIKDLNIILQAARHLEAHTGKDPKAEDVAHLLGRTVKEVQR
MLSLNQSMMSLDAPLDVDPLLSIGDAIADDQSPGPDLMWEQSEIKGRVQD
WLNRLNDKQRYIIEQRYGLNGYETQTLEQLAASLDLTRERVRQIQLEALQ
TLRMILRCEGVSKEGVF
>Nmul_A2741 sigma 32 (RpoH)
MTFALTVPSAGSLENYIQSVNQFRILTQEEELQLARSLRDEGSIDAARQL
VLSHLRLVVAIARGYKGYGLPQADLIQEGNIGLMKAVKRFDPERGVRLVS
FAVHWIKAEIHEFILRNWRLVKIATTKAQRKLFFNLRSLKQALDTMSQKE
VAEVAEQLGVKPEEVVEMETRFSGRDISLEPLSEDDDEETFSPIAYLTDG
SEPSHVLEDEQTMRLRGEGLEQALESLDARSRHIIEARWLREKDTATLHE
LADELGVSAERVRQIEAKAMQKLRAVMAPAA
>Nmul_A1774 transcriptional regulator, BadM/Rrf2 family
MILSRTTQYAIQALIYMATQPPGVAVLNRTIAECLRSPPTYLAKILQELC
KGNLLYSFRGKQGGFCLRESSDKINLMQIVRITEGPGFTEDCVLGLKVCS
DTTACPMHAKWWPIKQEIVKLLQGQTLDTLAAMVVSGKYQLTDFPGAVLG
NIELPA
>Nmul_A2596 putative prophage repressor
MQPLDISSYLGRLQDYYAREKIIPSTTQLSTLWNVKARSWTHQIVQRLKE
ENFLENAPGSRLRPGFRFFERTVGPGVRAGRPQQTADVQPELLRIDDYLI
EKPSQTILFPVKGDSMIDLGILEGDIVIIERSSSASPGEVVLAIVDSEFT
LKVLARDKEGYYLEARNEARGKEYPPIRPQQKLEIYGFYVGLFRKIQVPG
PRLHRSGLDR
>Nmul_A0841 conserved hypothetical protein
MKMVKKYRSNALASIHETMEVLHEIGAVDKQTMREFDESCLAPVLVMSPE
EIRELREREHLSQPVFVT
>Nmul_A0687 transcriptional regulator, LysR family
MLHITLRQLKVFESVARHLSFSRAAEELHLTQPAVSMQIKQLEDTVELPL
FEQMGKKIYLTDAGRELYHYSRAISQQLSDMELALDELKGLERGRLNISV
VSTANYFAPHLLAKFCQRYPDITVSLNVSNRETVLKQLSDNVIDLAIMGQ
PPEDLDIAAESFMENPLVVIAAPDHPLCRMERIPVKRLEQETFLVREPGS
GTRGAMERFFASHHISLSKGMETDTSEAIKQAVQAGMGLGITSLHTVELE
LETKRLKILDVEDFPIMRYWHIVHRKHKRLSSVAQAFKEFLLKEARGLMP
MSHKRAAEAWR
>Nmul_A1336 two component transcriptional regulator, LuxR family
MNVLIVDDHAIVRQGLRQILTESGKIDLIAEAESGGEAMRQLREGEWSVV
VLDISLPDRNGIEVLKQIRKERPKLPVLMLSMHEEGLYAIRALKAGAFGY
ITKQSAPNELMAAINQAARGRKYLTPAVAEAMAESLGTDHDRPLHETLSD
REYQTLRLIASGKSLTDAAEEMHLSVKTVSVYRGRLLQKMKLKNNAEVTH
YAIKNGLA
>Nmul_A0050 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
MQARGLSSSSATLPEASFLFHELSSYLTREDVSELQNAYLFSQSAHSGQF
RQSGEPYISHPLAVASILGKLRLDSQTLAAALLHDVMEDTHVSKAEIGDR
FGKSVAELVDGVSKLDKIEFQSHADAQAENFRKMLLAMARDVRVILIKLA
DRLHNMRTLEAMRPEKKRRIARETMEIYAPIANRLGLNNIYHELQDLSFR
YLYPRRYRVLTNATRAARGNRREMVTKILETMKQRLKTAGLDAEVTGREK
QLYSIYKKMVEKHLSFSEILDIYGFRVIVKDVASCYIALGALHSLYNPIP
GKFKDYIAIPKANGYQSLHSTLWGPYGTPIEIQIRTPEMHRIAEAGVASH
WLYKSSDADLNDLNMKTHQWLQSLLETMSDSTDSLEFLEHIKVDLFPGEV
YVFTPQGEILALPKGSTAVDFAYAVHTDIGDCCVAAKINGENAPLRTVLR
SGDRVEIVTASHAKPNPAWLNYVVTGKARSHIRRFLKTMQYEESAKLGER
LLNQAFATLKVDPQTISEAQWEKLTRESGAKSRTDLLADMGLGKHLPAVI
ARRLAASPGESTLGASGATDVITILGTEGMAVQFARCCRPIPGDPVIAFI
KKDQGLVIHTDDCPAVTKNKGSSDNWLDVAWGKDIDRQFEVGIKLMVANQ
RGVLARVAAAIADADSNIDNVAMEGDGAYTNMNFVLQVRNRHHLAQVIRS
LRRIPEVAKISRVKE
>Nmul_A2351 conserved hypothetical protein
MFRIKQLAWAMGCVSLMSGCTLYPWYQNKAGQAVNVKPVMEVRHAIRSAD
ALYQLGRYYQAKVDYAEAIAAYEKALEADPRHVEAHNGLGVAHCLLDRHE
LALQYFRKAIGMAPLAAHLHNNLGYAHLVHGQEAEAVSAFERALLLEPHN
QRARRHLAAVYKKAGLHDKAAALTVAPSGAPVGATKAPPTAPIPTPAPGT
PAGTPAGIPSAAISAISPPMAAAPGEKQKLSCSAAARLLQVTPGVFEFRM
AETEAMTAMPSGKIIGRTAPPQDSGKFSGQDIRIEVSNGNGLPGMARQVS
DFLQQNGFARARLTDRQPYQQALTEIHYRPGHSGVAEEISRLMPGGSGVP
TVESYNLRRDIHVRVMLGKDAVRQVAHLESPQKVQIAQGTAGAVE
>Nmul_A2319 putative transcriptional regulator
MSDRSASLPPSNFSVSSPAQVKKVLEAALLTSPEPLPLAELKKLFAGELG
SEILRRLLDELNRDWEGRGVELVQVAGGWRFQARAEMQEFLDRLNPQKPP
RYSRAVLETLAIIAYRQPATRGDIEEIRGVAVASSVLKALESRGWISAVG
HREVPGRPILYATTVEFLNDLGLRSLEELPPLEELGSLIEPKESVEQLPD
PENMPQPGNPD
>Nmul_A2674 two component transcriptional regulator, LuxR family
MRTLSPIFCSTNLESLKIELARLKPSVLLLDYDLPQLNGPSGISALIKLH
PEAKVIVLSHPLPDEAEWALFRTGVKGVCRRDIDGEQLHSVVTAVQRGEL
WIRRTLSWHLLNELVTITQEKTKIKQAVGELLANLTQREYEIATLVGNGE
SNKQIVRRLDITERTVKAHLTEVFRKLDIADRLKLALIVKGSIYPGDSSK
MSH
>Nmul_A1967 transcriptional regulator, TetR family
MTRSAKKEASRDNLLNQGVSMLMRQGYHGTGLQEILDAVNIPKGSFYNYF
DSKEDFGAKVIQHYVDPFITQLTTHLQRSEPDALGAIQCYFDELVAELEK
NDFKGGCLLGNLMGEIGDTSPLCQQSLQTAVTRYRDLLQSGLVKAQQQGT
VRTDKSAVEMADLLINAWQGALLRAKIEKSPAPVKQCCQDLLGDFFRPPA
SG
>Nmul_A0012 NusB antitermination factor
MKRVEKRAEKQGRGTARKSRRRLARELALQGLYQWCVAGGSAGTIEAQLR
DTEEFPKTDEEYFSRLLHGVLMQAPELEKEIQPCLDRPFNELSPVEISIL
LLGAYELERHPEIPYRAVINEAVELAKAYGGTHGHKYVNGVLDKLAVKLR
AAEIGAKI
>Nmul_A0062 putative transcriptional regulator
MPQQSKRVKQEDVIPDALKHFDSLPDSANVRQPVLKGLLNCSDATVWRRV
NDGTLPQPTKLGRMTFWNVGKLRKVLASLQGTAQ
>Nmul_A0932 phage transcriptional regulator, AlpA
MKTKNLPDAAPWYEIYRIPRVKGLTGLSRSSIYRLEALGLFPGRVKLSGS
AVGWRSDEIHAWIASRPPANPGKGAK
>Nmul_A0051 DNA-directed RNA polymerase, omega subunit
MARITVDDCLKKIPNRFDMTLVATIRARQLSVGGSPMVEPARDKPTVIAL
REISQGLVGTDILTTGPI
>Nmul_A1135 cold-shock DNA-binding domain protein
MATGTVKWFNGTKGFGFITPDEGNEDLFAHFSAINIFGNTGGFKTLQEGQ
KVTFEITNGPKGKQASNIQSA
>Nmul_A0536 Ribonuclease II
MNVFYEEEGTFKVGAVLADNMTSLQVEAPHGKRAKIKAASVLLRFDAPSL
TEFMDVAQKKAEDLDPNFLWECCESEVEFASDALAADYFGDRVTPEEAAA
VLIRLHSAPMYFYKKGRGRYKAAPPKALEAALASQEKKRRQAEQQARYMQ
SLSEFVLPEEFKPSLFNLLYRPEKNSVEWKALDAVCAAMKLSVSQLLQKC
GAIPSTHDYHLNRFLLEHFPEGTDFDDLGADQLAVLPDLPVADVTAFSID
DVTTTEIDDAFSVTPLTLGSFRIGIHIAVPTLGIAPGSPLDKVAEQRVST
VYIPGNKITMLPEPVIQQYTLSEKQLRPAVSMYLDVADDFTVTATTTRVE
QVKVAANLRHDTLEEQFNESTLAGGNINHPFGRELTALWNFARKMEALRG
KTNDSNNERIDYNFNLHGDHIVITERRRGSPIDKVVSELMIYVNAEWGRL
LADSGVAGIYRSQGNGKVRMSTSPAPHQSLGVSQYAWISSPMRRYVDFIN
QRQLVGLLRGEEPPYTRESESLHMFMRNFESTYEVYGDFQRSMERYWCLR
WLLQENVQVTGAQVLKENLVKLDRLPLVARVASLPELPSETAVEVEISNI
DLLELTFSIKFLRKLQA
>Nmul_A0792 DNA-directed RNA polymerase, alpha subunit
MQSNTFLTPRIIDVQNISPLHARITMEPFERGYGHTLGNALRRILLSSMP
GFAPTEVQISGVVHEYSALDGVQEDVVDILLNLKGIVLKLHNRTEALLTL
SKKGEGTVTAGDIEGGHDVEIINPDHVVAHLTSGGKLDMQIKVEMGRGYV
PGTVRQLAHESRAIGSILLDASFSPVRRVSYAVESARVEQRTDLDKLVMD
IETNGVVDPEEAIRYAAKVLVEQLSVFADLKGTPLPVEQPKLPQIDPVLL
RPVDDLELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIK
EVLASRGLTLGMKLESWPPSNLDKGKKDTSHAAP
>Nmul_A0005 Protein of unknown function DUF193
MKCPFCHTPDTSVIDSRVSEEGDRIRRRRRCPHCDKRFTTYETVELRLPQ
VVKQDGNRAEFDREKLRTGFVRALHKRPVSAEDVEAAMNRVVQKLLSLGE
REIASHKIGEMVMGELYKLDKVAYIRFASVYRSFQGAADFDDAIRELQGS
DSRKEPDKP
>Nmul_A1291 cold-shock DNA-binding domain protein
MATGTVKWFNEAKGFGFITPVDGSEDLFAHFSAINMSGFKTLKEGQKVTF
EITQGPKGKQASNIQAA
>Nmul_A0760 DNA-directed RNA polymerase
MKALLDLFKQVTQKEEFDSIKIGLASPEKIRSWSYGEVKKPETINYRTFK
PERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRE
RMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAYVVTDPG
LTPLQRCQLLTDDDYRAKTEEYGDDFRASMGAEGIRDLLNTLNIRVEIDD
LRREMGTTGSETKMKKISKRLKVLEAFSKSGIKPEWMILAVLPVLPPELR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYS
GRSVIVVGPQLKLHQCGLPKKMALELFKPFIFNKLEIMGIASTIKAAKRE
VENESPIVWDILEDVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLH
PLVCAAFNADFDGDQMAVHVPLSLEAQMECRTLMMSTNNVLSPANGEPII
VPSQDIVLGLYYTTREKVNARGEGMYFANISEVSRAYENRVIELNARIFV
RIREYELADGERREKITRYETTVGRALLSEILPAGLPFPLINKVLKKKEI
SKLINASFRRCGLRETVIFADKLMYAGFSYATRAGISICLDDMLTPAQKD
AIISASEKEVQEIELQYTSGLVTQGERYNKVVDIWGRAGDQVAKAMMDQL
GVEPIIDPETGTAKTGESGKPLIQESFNSIYMMADSGARGSAAQIRQLAG
MRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTAN
SGYLTRRLVDVTQDLVVTQEDCGTSNGVVMKALVEGGEVIEALRERILGR
VVANDIINPEHQAVIYPAGMLLDENAVDTIEMLGIDEVKVRTPLTCETRY
GLCAKCYGRDLGRGTPVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAS
RTAVASQVESKSNGIVRYSPTMRYVTNARNELIAISRSGEVVIQDDNGRE
RERHKAPYGATLLIRDGEVVKAGQVLAAWDPHTRPIITEYSGKVRFENVE
EGVTVAKQIDEVTGLSTLVVIDPKRRGVVQTKGLRPVVKLLDEEGKEVRL
AGSNLPVHITFQVGSIITVRDGQQVSVGEVLARIPQESSKTRDITGGLPR
VAELFEARSPKDAGVLAEVTGIVSFGKDTKGKQRLVITDLDGVSHEYLIP
KDKHVTAHDGQVVNKGESIVDGPADPHDILRLLGVEALARYITDEVQDVY
RLQGVKINDKHIEVIVRQMLRRVQIVDSGDTRFIPGEQVERAEMLAENEQ
VELEGKRPATYEYMLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKK
DDLRGLKENVIVGRLIPAGTGLTFHNTRKRQRLMLDTGEAPPLSEEETGE
IRNSGYAV
>Nmul_A0693 transcriptional regulator, TetR family
MARKTKENAELTRQRIVDAARQVFLERGVARSTMEHIAREAGVTRGAIYW
HFNNKIELIQAMREQVFLPLIDRMDDTLLVEGVDDPLACIENFLCGTIQV
LMDSKETRQTYEIMMIKCEYVDEFAMVLQQILFNCAHISEKLKLVYERAR
MQQLLHSSHDLVQLAIDTHLFFIGLLHMWVKDTEGNQFRHQAIELVEAHM
RLRRISL
>Nmul_A2013 putative transcriptional regulator, CopG family
MTELERLTITLTPELSQTIKTAVLDGDYASASEVIREALRDWKVRRELRQ
EELAALKTDIEQALSEVAAGQLSEFNRERIVERARKLLAARKRAG
>Nmul_A1683 transcriptional regulator, ArsR family
MNKVHDFPDMISMRAAALAACTMLKILANEDRLLILCQLINGPSSVGELE
KDLGIRQPTLSQQLTVLREEGLVATERKGKYIIYSLANPDVVRIMETLYS
IYCGGGGNTPHKS
>Nmul_A1942 putative transcriptional regulator, XRE family
MKLFEEISNPREIRRKLGLNQHDFWSKVGVTQSGGSRYESGRNMPRPVRE
LVRLVHIEHIDLSKIKKDDLAVAALLKSKDPELYKSLKKASKAKQ
>Nmul_A2767 parB-like partition proteins
MKPDERKMKIRGLGRGLDALLAGSGGNAVSEETLQSIKVSLLQPGKYQPR
TRMDKESLGELADSIKAQGVMQPVLVRPVGGGKYEIIAGERRWRAAQLAG
LGEVPALIREVPDEAALAMSLIENIQRENLNPLEEALGIQRLIRDFGMTH
QAASEALGSSRSAVSNLLRLLNLAAPVQELLMQGKIDMGHARALLSLAAA
KQIETANLVVHKGLSVRETEKLVYQIEHPVVKHHPQRDRDLLRLQENFSA
KIGAQVVITPGKKGKGTILIHYETLEQLDGILSRW
>Nmul_A2355 response regulator receiver domain protein (CheY-like)
MKTQQERQPGKIATKFNQEKTREGKKLKIAVVAQDSQYPSTIQRFLAEAD
KSYPLISLIGGVQQVAAVAEQEQPDLLMLEGQYFSSMELETLNRVTSRFP
DVGVVMLCPAQPPELLIEVMRAGVREVLPTPLTRHGVIDAVERFQQRIAL
SRMPMHECKVLAFIPCKGGSGATFLATNIAYALAAQENKRVALFDFNLQF
GDASLFVQDGPPATSIADVARQIQRLDGSFLNSSMIQVLPNFGMLAAPES
PEKAAEIRSEHINPLFQVAMKHYDFVILDVGRELDAISIQALDRADLIFP
VLQQTLPSIRDARRMSAAFAALNYPDEKIRLIVNRYKKNADITLDDIEST
LNLKIFKVVPNDYAVVTGSVNQGIPATKLAPRSPVAKSLQEIAHELCRGA
GQGNLLRKLFAF
>Nmul_A0801 regulatory protein GntR, HTH
MAIPIELDHNSRQSLQGQIFDQLRHLILGGKLKPGTLIPASRVLAEQLGI
SRNTVLLVYDRLIAEGYLQARKAIGTYVNLELPETCLSATRRVTPSSPGD
EEFVKQPVIPFIGHIHANITVQHLDFDFCPDRIGLDLFPHKIWRRFVNKT
FMSANMHFEECCDPGGLSELREVIAAHLGVARGISVSSDQIIITAGSQEG
LNLAARLLVKEGTMVATENPCYQGATSLFESYYAKLIPVPVDEAGLDVEQ
LPKEGVALLFVTPSHQFPLGFTLPIERRLKLLDWARRCGAFIIEDDYDSD
FRYRGSPLTALMGLDDYGCVMYLGTFSKSMGAGLRLGYLVVPKALIPAAR
SAKALLNNGHAWLDQATMAEFIRSGAYGNHLRRMRNMYGKRRDCLVEALR
EHFGAIRLSGLESGLHLAWHLPDHYPPAAQLQTIALRHGVRIYSIGGGTG
YDYGGCRYSARTLVLGFSSLNEYQIRAGVRRIADAFADMSLNPLSMREKV
DNVATPSL
>Nmul_A1531 transcriptional regulator, XRE family
MYYDGMDIARIIREGREKLKLNQSELAELVGVSPQAVQQWESGATQPRGK
RLNKIAEVLKLPPAMMHFGMSLEVPAAPDAAVSRQPENPGRGTRGTSPRV
TEKPVSENDALINQVVEAMRRMSKEDAARLVTISKALVGETVTEVAEAVP
SVDLKPLPVPDLPPHPPPAFPPRRMSESRTKVRGKTAIR
>Nmul_A1244 urease accessory protein UreG
MNKQSNPLRVGIGGPVGSGKTALCEALSKRMRDRYEMAVITNDIYTREDM
EILLRADALPPERLMGVETGGCPHTAIREDASINLEAVARMTADFPELDL
ILIESGGDNLASTFSPELSDLTIYVIDVAGGEKVPRKGGPGITRAALLII
NKIDLAPYVGANLEIMARDARKMRGERPFVFTNLHTGEGVDQVIDFIVKQ
GLLDEVRSQHHHA
>Nmul_A0145 GCN5-related N-acetyltransferase
MQFKIREGRQADAGAAGMICYEAFRTISQQHGFEPDFPSFEVARDLLLGL
LSRPDVYSVVAESEGRIIGSNFLWQDSAIAGIGPLTVIPETQSDRVGRGL
MEDVLEHARNKHFAGVRLVQAAYNNRSLSLYTKLGFEVREPLATLQGAPL
QIDISGYNVRPARAEDANACDALCRKIHGHDRGQELRHAIGQQTAMVVEH
GGHITGYATLIGFTGHAVGESNEDLKALIGAAAAFAGPGFLLPTHNSELF
RWCLQQGLRVVQPMNLMSLGLYNQPAGSFLPSILF
>Nmul_A0674 transcriptional regulator, BadM/Rrf2 family
MRLTTKGRFAVTAMIDLALHSADGPVTLAGISERQKISLSYLEQLFGKLR
RSKLVGSVRGPGGGYRLTKPMSEVSVVDIILAVDEPIDATQCGGKENCHN
DQRCMTHDLWANLNARIRDYLALVTLEQLVSNPKVKDIAVLQDVRTCSSS
QHRTVPA
>Nmul_A1585 RNA binding S1
MLPSIEQRLSLELGAKPAQVNAAIALLDEGATVPFIARYRKEVTGGLDDA
QLRLLEERLRYLRELEDRRAAIIASIEEQGKMTPALLASILQAEDKTRLE
DLYLPFKKKRRTKAQIALEAGLEPLADALLADPTLQPEEEAIKYLKPPFA
TEQGDNPGVPDVKAALEGARQILMERFAEDAELLQWLREYLLDHGVVESK
VASDKNGGKGKEEEGAKYSDYFDYSEPLSAIPSHRALALFRGRREEILRV
ALRLDSEAEKPKWDAPHNPCEARIAVRFGIADKGRPADAWLMDTVRWTWR
VKSFPHLELDLMGSLRTRAETEAIQVFARNLKALLMAAPAGPRVTIGLDP
GLRTGVKVAVVDATGRVMETATIYPHQPRNDWEGSLHVLGTLAEKFRVSL
IAIGNGTASRETDKLAKDLIKRRPDLKLTSIVVSEAGASVYSASDLASRE
FPDMDVSLRGAVSIARRLQDPLAELVKVDPKSIGVGQYQHDVGQTQLARS
LDAVVEDCVNAVGVDVNTASAPLLERVSGLNPAVAQSIVVYREENGMFAS
REALHQVPRLGEKTFEQAAGFLRVMHGENPLDASAVHPESYPVVQRILSD
LKQEIRSIIGNNKLLKSLNPARYADDRFGVPTVTDIVKELEKPGRDPRPE
FITAAFKEGVNEISDLQPGMLLEGVVTNVAAFGAFVDIGVHQDGLVHISA
LADKFVKDPHTVVKVGQVVKVKVLEVDEKRKRIALTMRLADAPAPQTQEA
RGAGKREQPRNRKDRSAKPQQKQDSRADTAMAAAFARLKG
>Nmul_A2635 transcriptional regulator, LysR family
MTSLLELRHLRTLAALDETGSVSRAAKRVHLTQSALSHQIKALQNHYGLP
ILRRQGQSIELTEAGQHLVTLARKVLEEIQATERNLAKMSEHASGSLRIV
LECHTCFDWLMPLMDAFRQNWPEVELDLVSGFHSDPLQLLEEGGADVVIG
SEQTERRSIVHHPLFRFEILAVLAPEHPLRAKKILHARDFAGETLITYPV
PEERIDLIRNVLKPAGVQPERRTAELTVAILQLVASRRGIAALPSWGLKN
YVEHDYVIARRIGPQGLWSDLYVSTLAETATRPYLRDFLVTARNTCFATL
DGIIPLKSAEQ
>Nmul_A2210 transcriptional regulator, XRE family
MRCSLCGKGEVVAGTRDVPFTYKGQKTFIKNIRGEYCNRCGEGYYGPEHD
GDILMAGYREFREKVDTVLAEQATFVEQVRKKLGLDQREAGEIFGGGVNA
FSRYETGKVRTPVSVMQLFTLLDRHPELLEEIRQNRYRTRGTQELREEVS
AQKELTD
>Nmul_A1235 two component transcriptional regulator, LuxR family
MIIKTFLADDHRLFRDGLRRILAETTDIVVVGEATDGLDALKKMRLGGWD
VGLLDVSMPGMNGLEVLQRIMDDDPKHRILMLSTYHEDEYAIRAIRAGTS
AYLTKNSPTDLLISVIRRLAHGGRYIDPKLAEKLLFDLGPSSTMPRHSAL
SNRELDVLKLIAVGISLTEISQKLKLSAKTISTYRARVLEKMGMQNNAQL
IRYVAEHKLLE
>Nmul_A1117 transcriptional regulator, TetR family
MTGRPGERKDQILQVLAEMLEEPRAGKITTAALAAKLDVSEAALYRHFAS
KAQMFDSLIEFIEKTLFTFINKMVAEEKSGIRQIEGILALLLGFAKKNPG
MTRVLIGDALINENERLQNRVTQLHDRLEATLKQALRFAVSQREIVEDLD
VSAHANMLLCYVVGRWHQFAKSGFKRDPMEYWEAQFREIVSSNSFGQVVS
>Nmul_A2211 hypothetical protein
MECVICWKGELVRDTRDVSFTYKCQKTFIKDIDGEYCTHCGMGYYGPEHA
GDELVAGMVEFRKHVDSVLQEQGLFVAKTRQKLGLEQNEADGIFGGINAF
SRYESGKVRTPVAVMQLLTLLDRHPELLEEIRQNRYRIGGAQEFREESFG
SIGADQNQLRLTVNP
>Nmul_A0084 sigma-54 (RpoN)
MKPTLQVKLSQHLALTPQLQQSIRLLQLSTIELNQEIERIVQENPLLELD
DSLGNDSTDYHSLIPEELAAPLPNELEVAEESLPILSVEAETDVKQPLDE
REWPPDDSVFRPYRDDEDERDIPQQAVEPPNLRAHLNSQLSLSQISQRDR
KITGLLIDSLDDDGYLVQDLEELVDLLPAELSIDIDDLHIALEHLQHLDP
PGIGARNLRECLVMQLQALPPDTPYLEQALALVNNHLESLASRDFGAIKR
VLHCNDDCLRSVQQMITRLNPRPATAFSSTVACYIVPDVIVTKVGGSWVA
SLNPEAMPRLRINRLYAEILKGCNDDSTRRLISQLQEAKWLVKNVQQRFN
TILKASAAIVERQQQFFEHGAVAMRPMILREIADVLNLHESTISRVTTQK
FMRTPRGIFELKYFFGSHVSTDSGGACSATAIRALIKQMISEENSRKPLS
DSQISEVLGQQGIMVARRTVAKYRESLQIPSVNLRKSF
>Nmul_A2423 negative regulator of class I heat shock protein
MLNKRAQILLKTLVERYISEGQPVGSRSLSKFSGLDLSAATIRNVMADLE
DMGLVASPHASAGRIPTHQGYRFFVDTLLVVKPLDVIEIHQLQDQLHPDN
PSRLINSASQLLAELTRFAGVVVSPKRNSAIFRYIEFMSLSEKRVLLIIV
TPEGDVQNRVLFTDRNYSQSELTEAANFINHNYAGCAIDEIRTRLQSELK
QLRQDMTSLMTAAIDAGDAAIRENSEAVIVAGERKLLDVQDLSSNMASLK
KLFDLFERKTALLQLLEFSRKAEGVQIFIGEECGVVTMDEFSVVTAPYRV
DGKMVGTVAVIGPTRMAYERVIPVVDMTARLLSSALSLH
>Nmul_A1051 sigma-24 (FecI-like)
MFAIRDEHLALDIVQDSMMKLVEKYSAKPLEELPLLFQRILQNTIRDFYR
RQKTRSLWTTLFSAFIPSDHEKESEDFDLLETLQSDPSSSKVNDPHQQLE
QSQLINLLERAIETLPARQREAFLLRYWEEMDVMETAKIMGCSEGSVKTH
CSRATHTLAAMLKKHGIGL
>Nmul_A0759 DNA-directed RNA polymerase, beta subunit
MSYSFTEKKRIRKSFAKRASVLPIPFLLATQIESYAAFLQANLEPDQRAP
EGLQAAFLSIFPIESHSRNARLDFVNYVLGAPPFDVKECQQRGLTYASPL
RAKVRLTIMDKEASKPTVREVKEQEVYMGEIPLMTNTGSFVINGTERVIV
SQLHRSPGVFFEHDRGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDYLYF
RVDRRRKMPITVLLKAIGYTPEQILENFFSFDSFHISRKSILFELLPERL
RGDTARFDILSKSGKVIVQKDKRITVKHVREMQQAGIDRLEVPEDFLLGR
VLGHNVVDKETGEILALANDEITETLLGKLRDANVEEIRTIYTNDLDQGA
YISQTLKIDETADEMAAQVAIYRMMRPGEPPTEEAVKALFIGLFYAPERY
DLSVVGRMKFNRRVGKTELDGPTTLSNEDIIAVIRILVELRNGRGEIDDI
DHLGNRRVRSVGELAENQFRSGLVRVERAVKERLSQAESENLMPHDLINA
KPVSAAVREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGF
EVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAQTNEYGFMETPYRKVT
DGLVTDEIHFLSAIEEGQYVIAQANAELDGDGRFTNDIVSCRHKNEFTLA
TPDRIEYMDVAPAQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRA
EKPLVGTGIERVVAVDSGTAVKAVRGGVVDYVDASRIVVRVHDIETRAGE
VGVDIYNLTKYTRSNQNTNINQRPLVKVGDVIARGDVVADGASTDKGELA
LGQNMLVAFMPWTGYNFEDSILISERIVANDRFTSIHIEELSVVSRDTKL
GTEEITGDISNLSEAQLGRLDASGIVHIGAEVEAGDVLVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPSGISGTVIDVQVFTREGIERDKRA
QQIIDDELKRYKKDLADQMRIVEADAFVRIERLLIGKIATGGPKKLAKGA
TLTKEYLESIDPHHWFDIRLADEGASVQLEQIEEGLAQKRKAFDAAFEEK
KKKLTQGDELPPGVQKMVKVYVAVKRRLQPGDKMAGRHGNKGVISKIVPV
EDMPYMADGTPVDVVLNPLGVPSRMNVGQILETHLGWAAKGLGQKIGDML
RAGKEIVELRAFLDKIYNTSGKPEDIASLTDGEIADLAQNLQDGVPFATP
VFDGATEQEIKDMLELAGLPRSGQVTLHDGRTGEAFDRPVTVGYMHVLKL
HHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGSAY
TLQEMLTVKSDDVNGRTKVYESIVKGDHKIDAGMPESFNVLVKEIRSLAM
DIDLERH
>Nmul_A0916 transcriptional regulator, AraC family
MHIHILALDQVFDTGLSTLLDTLSIANDLAVSANAVTRFDLTIAGVRRNI
RTSQGFSVPVVPAARCSPPDVVLIPALGAKMPETLRLALERPDVCEAGDL
LRQWSKEDVLIGAACTGTFVLADTLLLNDRSATTSWWLSPLFRERYPRVR
LEESRMVVSSPGLVTAGAALAHIDLALWLIRQSSPTLAEMTARYLLIEPR
ASQAVFAIPDHLAHADPLVQQFERWARHRLGERFSLSEAASATGTSERTL
SRRLKAVLGKSPLSYFQDLRIERAVYLLGTSNDNVDAIAAQVGYADGTTL
RTLLRRRVGRTVSELRARTREISSSFNDSQAQDIE
>Nmul_A0480 GreA/GreB family elongation factor
MSTIPLTVTGAGKLRAELHEMKTVQRPAVIAAIAEARSHGDLSENAEYEA
AKERQGFIEGRIAELESKLSNAQIIDPATLDADGACVFGATIDLEDVESA
TTVTYQIVGDDEADIKEGKISISSPISRALIGKYPGDVAEVMAPGGVREY
EILDVRYI
>Nmul_A2246 cold-shock DNA-binding domain protein
MATGTVKWFNDSKGFGFITPDDGSEDLFAHFSAINMSGFKTLKEGQKVTF
EVTQGPKGKQASNIQSA
>Nmul_A0754 NusG antitermination factor
MEKKWYVVHAYSGFEKSVQRALKERISRAGMLDKFGQILVPVEEVIEMKA
GQKNLSERKFFPGYVLVEMEMTDETWHLVKNTPKVTGFIGGTAMNPTPIS
EKEVQNILHQIQEGVEKPKPKILFETGEAVRVKEGPFTDFHGNVEDVNYD
KSKLRVSVSIFGRPTPVELDFSQVEKA
>Nmul_A0132 transcriptional regulator, Fis family
MSIINENDIARCVRKTVEDYFNDLDGEKPHAIHEMVIRSVEKPLIELVME
RAGGNQTRAAELLGINRNTLRNKMKQYQIK
>Nmul_A0706 two component transcriptional regulator, winged helix family
MFGTLHVRILIIEDDRAIASNLYDFLEARGHSVDAAADGITGLHLAVTQQ
FDGILLDLGLPGADGITLCRKLRQEAHLDTPVLMLTARDTLEDKLKGFDC
GADDYLVKPFALKEVEARLVAMHKRRKGKVTSRTLETEDLSFDPKTLTIR
FAGANVKLPPKCIGLLAVIMSEPGRVFSRRELESEVWGDVQETSDTLRSH
MHELRRALTRAGGYDPIETVHGLGYRLSTRARN
>Nmul_A2465 ParB-like nuclease
MMETIETGLVRIPIKKLVISPLNVRKKQGTGIEELAALIASQGLIHNLVV
TVQQKKGRKSGKYEVIAGGRRLAALNLLVADRRLSKDHEVDCRVVEHKEA
LEISLSENSGREHMHPADLVMAYRSLIDAGFALDEIAPRFGVSPLTVRRY
LKLTKVSPRIFALYAEDRMSFEQITALALTDDHELQERLWDNTPEYQRNG
ATFRRLITETEINIRTSPLARFVGVEEYEAAGGVIRRDLFGEEDDGYMQD
AELLESLALEKLNQAVEPLKEKGYAWVQVRTTFDYSDRAEFSQMRIVRRE
PTSAEQARMDALEAELEAIEAGYDGSDEERGSTGELYKSIEKKKKAERIR
DELTKLAESLEEIYPDDLAIAGAIATVDHEGKLRIERGLIRKEDMRKQPK
ESKESKEPRESREQNEPGESGEREAAAIEGAGGEKPVHSEKLTRMLTVHR
TAAVQAAMTNRPEVALAALVHRMAVQIFSNDSASNPVLQISIEETRVKPD
AEGIEQSKAATALAKKRRQWQKRIDAAGRGGMTLFGWLLEQSQQDLLDLL
AFCTAVSVNTVSERESTPPQDVTALMTALNLDMADWWEATGESYLSHVSK
DRLLAIVAQAVSPEHARSMNGLKKGDLVRQAEQVLSGIKWLPDHFKVTKT
RTGKQSDA
>Nmul_A0440 GCN5-related N-acetyltransferase
MQEQKPPSHGQITRTGRTSMSLYIVRAASWREDAVALRAVREAVFIREQG
VPAELEWDEFDDVCVHLLAMNPSGNPIGTARLLPDASIGRMAVLRNWRCK
GVGSALLDRLLKEAENRQFPSVTLNAQTHATGFYRKFGFQQAGPEFLDAG
IPHVKMMLQFRPLTVDTP
>Nmul_A2478 Protein of unknown function DUF179
MQSVDLTHHFLIAMPAMTDPFFAKTLTYICEHSDQGALGLVVNRPIDLTL
KDLLDQLDISSDDQLTRRFPIMFGGPIQLDRGFVLHQPVGEWQSTMAVND
DVGLTTSLDILRAIANGESPRQLLVALGYSGWAPGQIEHELSRNAWLTVP
ASPAIIFELPAEERLTAAMRLLGVDFSSLSDEVGHA
>Nmul_A1871 GreA/GreB family elongation factor
MSKAFTRESESDDLDEEGNGNGLPSLPSGSKNYITPEGHKRLMDEFLWLM
NRERPQVTATVSWAAANGDRSENADYIYGKKRLREIDRRIRFLTRRLDMA
EIIDPSMPREDESRIFFGATVTYINEKGEEKIVSIVGVNEIDTTRGYISW
VSPLARTLLKAREGDVVTLHAPGGTEELEILEVRYQAIPMEPFRMGSGME
KTMANPGENPNPQ
>Nmul_A1110 transcriptional regulator, LysR family
MLNYKQLNYFWAVAKAGSIVRASERLNLTPQTLSGQIGLLEDALGVPLFL
RVGRRLELTETGRLALSYADEIFQIGNELEEALRARPERHAIPFRVGVDD
AVPKSIAYRLLTPAMGLASPVRIVCREDKLARLLVELAIQRVDLILADRP
MPDEANVKGYSHKLGNCGITFFAAPCLAKTFKKKWPHVLDAAPLLIPGKD
AAIRLPLMRWFDVHQLRPHIVGEFDDSALMQAFGQAGIGIFIAPSVIADE
VQREHGVVVVGCTDEVTEQFYAISLERRLTHPAVVAINDTAHRELFATLA
AS
>Nmul_A2742 BolA-like protein
MVTADSIKTHIETSMSCELVHVEGDDGYHFSALIVSPEFRGKNMVQQHQL
VYRALGDRMKQEIHALSMKTMTPEQWAESNNQN
>Nmul_A0938 GreA/GreB family elongation factor
MNSRPHIILTSQDLDRLETLLESLPANAVPGSAELQAELERAEIVEPEQI
PPTVVTMNSTVRFSIDSSGQDFRLTLVYPKDVDGSGNKISVLAPVGSALL
GLSTGDEIEWPRPGGGTIKVRIEEIIYQPEREGKFYR
>Nmul_A1313 sigma 28 (Flagella/Sporulation)
MYTSVGTIDKQQHIVEFTPLVKRIANHMMARLPVSVEADDLVQVGMIGLM
EALNRYEEMPGAQFETYAQQRIRGAMLDELRQLDWLPRGARRVMRQIESA
INVLQHRLGRSPSERQIAEELGVSIESYQQMLFEAKGTQLIHYEDFSDDE
DDDFLERNCADNTADPLAALLDGDLRRILINAIEILPEREKTLMGLYYEQ
ELNFKEIGAVLGVSESRICQMHSQAIARLRVRLKECAWTSIA
>Nmul_A2265 transcriptional regulator, LuxR family
MILLYGISPHWSKSAIKKNSPHLREEPGLALFSTCPVPWLWNKQLLFKNS
QGLNPIYFINKERGQQGNTGCGKAVLSRIPAPRWVEILLPYIDAAFGRID
PPPRNYRHTPVPLNPEEVGFSPREIAIMEWIRRGKTIPETAAILEVSTFT
VKNCLLDLFQKLHAADSGESTAEQQIRFSH
>Nmul_A1521 hypothetical protein
MSDENEYQKEASSLQPGQTVTIIDEQNALTLTEISHACSVQTGYIIELVD
EGLITPEIATEEHEPHRWRFSGAQMRRARTALRLQSDLGINLAGVALALQ
LLDEIETLQMRLNVLNNW
>Nmul_A1412 Helicase c2
MTPSMLDINSLFSAGGALARSVPGYIVRTQQREMAQAIADTIASSTILIA
EAGTGTGKTFAYLVPALMTGGKVIISTGTKTLQDQLFNRDIPTVQSALKI
PVTVALLKGRANYVCHYHLELTFQESRPALVSREEVKYLNLIERYAKNSK
SGDKSGLSEVPENASVWQYVTSTRDNCLGSNCPHYKDCFVIEARKQALSA
DVVVVNHHLFFADVMLRDEGLSELLPTCNTVIFDEAHQLPETASLFFGES
VSTGQLLELARDSEAEALGNAKDFAPLPPAIAAMEKAARDLRLTVEGENM
RMPVTAIKANAKFAGALSELQERLDSLIDLLESQAERSDGLENCWQRSRE
IAGRIKRWQEQAEAEGFVRWVEVFSQALQLNATPLSIAGIFNKQLGGPPR
AWIFTSATLSVKGDFSHYNDQMGLNTGTIPSHSMCWESPFDFAHQALLYV
PAGIPEPNSSRYTEDVVKAALPVLKASRGRAFFLCTSLRAMQKTYELLLE
AFKRERLDYPLLLQGQGARSHMLERFRKMGNAILIGSQSFWEGVDVRGEA
LSLVVIDKLPFAPPDDPVLAARIDKINKEGRNAFMEYQLPHAVINLKQGA
GRLIRDETDRGVLMICDPRLISRPYGRKIWQSLPPMKRTRNLAEVEAFFS
ANSTLTQA
>Nmul_A2657 DEAD/DEAH box helicase-like
MSFTELNLTPEILRAIADQGYTDPTPIQTQAIPHILEGRDIMGAAQTGTG
KTASFTLPMLNLLQSGANTSASPARHPIRTLILVPTRELAIQVHESVKTY
GKYLPLRYAAVYGGVDMEPQTRELRAGVEILVATPGRLLDHVQQKAINLS
KVEILILDEADRMLDMGFLPDIKRILALLPSQRQSLMFSATFSDEIKKLA
GKLLREPVLVEVARRNTITELITHVVHPVVRERKRELLAHLIKSQDLQQV
LVFARTKHGASRLAHQLERDHISATAIHGDKTQTQRTEALAKFKQGVVRV
LVATDVAARGLDIEELPHVVNFELPTNPEDYVHRIGRTGRAGTKGDAVSL
VCEDEAELLKGIEKLLKFKLESKVVPGFEPETPVAQGEAAISHGRIDQKS
AGSQPRGSQPRKLEQANSVMSLNGTKGKTARSSKEHAGSRRTGKLPEDPL
FTQPYTPGTFSGEPSDRTSAKSETPLPEKRFDYFAHKQQKKPIPALFMPP
RGQSKQGQEG
>Nmul_A0639 transcription-repair coupling factor
MAFKLTIPSSGSTIRYGHFDGSSDSLALAQLALEAKKAKPVTIITASALA
AQRLLEEIPFFAPELRTRLLPDWETLPYDTFSPHQDLVSERLATLYQLMN
GACDILIVPVTTALYRMPPPEYLAAHTFFLARGETLDLNALRSQMTLAGY
SHVTQVLSPGEYSVRGGLIDLFPMGSPLPYRIDLLDNEIETIRTFDVDTQ
RSVYPVTEIRLLPAREFPLDEEGRTRFRGRFREKFEGDPSRSLIYKDISK
GGSPAGIEYYLPLFFEHTATLFDYLPQTALLCLHHELYQTVESFWHDTQA
RYQLLRGDSDRPLLKPADLFLTTEAFFGALKPYPRIEIPPEERATKTGGA
EVQGLSIPLPPLQIDRRAVNPAEKLSAFIAEFESSGGGRTLLLAESLGRR
ELIADHLKQYRLNPDICDNYAQFRASTSPFVLGVGPLHNGFIYPEKGIAF
VTESELYARHLHGRGERDSRKTSAVADAVLRDLSEIKAGDPVVHEQHGIG
RYLGLVSMDLGEGETEFLSLEYASGDKLYVPVSQLHLIGRYSGASPESAP
LHKLGSGQWDKAKRKAMQQVRDTAAELLNIYAQRAARVGHAFRLKEQDYE
AFVEGFGFEETPDQATAIAAVIDDLTSARPMDRLICGDVGFGKTEVALRA
AFVAVADGRQVAVLVPTTLLAEQHFQNFSDRFGLIAEEWPVKIAELSRFR
SGKEQAQALAGLADGQIDIVIGTHKLIQKGVRFKNLGLVIIDEEHRFGVR
HKEQLKSLRSEVDVLTLTATPIPRTLALSLEGLRDFSVIATAPQRRLAIK
TFVNRFSEGIIREACLRELKRGGQIYFLHNEVSTIQTMHDKLARLLPEAR
IGIAHGQMRERELEHVMKDFYQQRFNLLLCTTIIETGIDVPTANTIIIHR
ADKFGLAQLHQLRGRVGRSHHQAYAYLLVPEEEALGTQARKRLEAVQSME
ELGAGFYLAMHDLEIRGAGEVLGESQSGEMQEIGFTLYANMLEAAVRSLK
EGKEPDMQHPLGVATEINLHVPALLPEDYCSDIHERLILYKRMANCTSDE
QLDEMQIELTDRFGLLPDPVKALLDCHRLRIAAAPLGIIRVEASSESIQV
QFTPNPPVDAARIVALLQRSRDYQLSGPDRLKIKTCIPEAGERVRRIMDL
FTELGT
>Nmul_A1317 anti-sigma-28 factor, FlgM
MPSCVQEPVTGPDKSQVSPGFSVKLSTVKLRRQQLKIENSIKTESAKPVH
EGQSSPGKSGQRAVASAVTSGASSTSSANSISTDIQLSAQLKNIEKNLAK
GEVFDTHRVAEIKQAISEGRFTVNADKVADGLLDTVRDLIRRRQG
>Nmul_A2057 sigma 70 (RpoD)
MAIKESEDMKKLLRAQAKEAAAKELTKVDEEMFDNDSETETDSMAKAPEQ
VTEIAKAVMAAKEPTLANGKIARSRAAREGKNSHAKDPEKAAASQELEAR
RMRLKNLIVQGKERGYLTYAEINDHLPDDMLDAEQIENIISMINDVGISV
YDEAPDAETLLMSETAPTVADEDVVEEAEAALSTVDSEFGRTTDPVRMYM
REMGSVELLTRESEIEIAKRIEDGLKHMIQAISACPTTIAGILEFADRVS
KDEMRVDELVDGLLDPSTEEIISEEISDESLEQELNSDAEDEDVTAVANA
NLLKLKNDALERFAVVQKAYDEMQKVLEKKGSGNKAYKDIQEQISSELMA
IRFSAKMVERLCDTQRALVDEMRGYERKIMELCVSKVGMSRNHFIKTFPG
NESNLNWVDEEIALGKPYSAALERYRPEIVEQQQNLLALQKQVGIPLKEL
KEINRRMSTGEAKARRAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEG
NIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIE
TINKMNRISRQILQETGQEPEPAVLAQKMEMPEEKIRKILKISKEPISME
TPIGDDEDSHLGDFIEDSATMAPADAAVYASLRDVTKDILDSLTPREAKV
LRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSERLR
SFLDTEG
>Nmul_A0872 conserved hypothetical protein
MDPNESKKWDMHWYDWLVFAVPTIFIASLGLESAFGTTPGPGTAAYRDFR
AVAHWFDPVFFQYNLVMTLLAVLVVPSLALSYMMKMANRKERRLYRDVPP
ERRGEIRQRMGRRASFGTYRGSVCLTTVVVLLGSSILLLFKPVSSSAELG
VDFSLGANMLMMGPFMELYETGNGSYYSHLVRNLTAFQFGFLGAYVYFIG
SVVRAYFTMDLTSNTFVDGAIRMIVASLLALVLSFAFDLLLPHELDVNVS
STAPSTAAPSDVNATTPALPPPSTPSTGEESGETTSPERSGNSEKLLSKQ
EVPLPARLSLLPLVAFFLGFYPKRTALGIERIVIKLTRGIIPTMSYRALP
LSMLAGMSYSHELRLEREGFDNIENLSNADPVDLAIRTCFSYSQLKQWID
QAWLASHLREDYPGFAQRTGITNSEELRCFFSTCDTSHTDGVEQLLAALS
ADPATVASWRLRLNTLRILLDTNSSRQGSGHDFTERELTPPQVTHPEAAT
SSPKSQTDR
>Nmul_A1145 transcriptional regulator, LysR family
MKLQQLRYLCEVANQGLNLSKAAEILHTSQPGISKQIRLLENELGVDIFV
RNGKRVVETTPPGRAILEIAERMLRDAKNLKQVGQEFANEASGSLTIATT
HTQARYALPSAIQHFTARYPKVRLVLRQGNPTQIAELVTSGVADIAIATE
AIELFSELVMLPCYQWNRCVIVPPRHPLLKLKGLTLEAIAEHPIITYDFA
FTGRSKINQAFDAKGLVPNVVLTAIDADVIKTYVELGLGIGILAQMAFEP
SRDRHLRAIDASHLFEPSTTRIGISRNSYLRKYVYDFIEMFAPHLDRATV
AAAMTERP
>Nmul_A1932 transcriptional regulator, TetR family
MKEARKSIEEKLLLAARRLFCRAGIHATGVTRILEEAGVARASLYTHYGS
KENLLKAVFDTEANMWFHWFDLDLPHLKCSPRERILALFDLLEKWFAKED
FFGCVFINAVAEHEKDSRWVKDIASAYRDQIIDRLRSLVVESGAKDPDML
TQKLGLIIEGAIVTAMVTQNSQPAYIARLAAEDILRCMEYTLSPAENSAS
SAAPASMEPV
>Nmul_A1464 hypothetical protein
MEREALIKPGTCKFVGEVSSEEAEKGAVSVEPASPKKSSRAIKRREALDA
IFAGISLGKSARAMCVEVGISQRVLWNWLASDEELMRQYQRAKELCVDAY
AEEIIEISDEGSRDTYVDEKGREVINREVIARAQLRIDARKWYAARLAPR
KYGDKLPVTNEGADARKAAHNIAIAFVAPEDRGNEPNVSS
>Nmul_A2608 MT-A70
MNQKTPNPAAELLEHLADKRFSTILADPPWQFQNRTGKMAPEHKRLNRYD
TMELDEILSLPVRALAEDTAHLYLWVPNALLPEGLKVMEAWGFKYKSNLV
WHKIRKDGGPDGRGVGFYFRNVTELVLFGVRGKSARTLAPGRRQVNFLAT
QKREHSRKPDEMYEIIESCSPGPYLELFARGTRPNWLAWGNEADNDYYPK
WRTYGNHSQAELIFFEQARQRYLNRK
>Nmul_A2160 hypothetical protein
MISCRLSVILGAKRIKVADVCRGTGIARATLDRYYYDRVNSFDRVVLEKL
CKFLQVKPGDLLVMIDQPDLFEAHAASGFTGALAKGKKA
>Nmul_A1472 transcriptional regulator, LysR family
MQDLNDLYYYVQAVDHGGFAQAGRALGMPKSKLSRRIATLEERLGVRLIQ
RSSRRFTVTEVGQTYYEHCKAMLVEAEAAQEAIEAMQAEPRGVVRLTCPV
ALLHVNVGVMLADFMVRYPHITLHLEATNRRVDVLSEAVDVAIRVRPPPL
QDSDLVMRVLADRGQCLVGSQALVWHFGFPRTPGELSNWPSLGLGTPQQI
HKWVLHGPNGAQATLHHMPRLITTDMITLRNAALAGVGMVQLPVLMVRDH
LAAGSLVRLVPDWTPHREIVHAVFPSRRGLLPSVRTLIDFLAERFRLLHE
E
>Nmul_A2505 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
MSAPSLISGKGDGPFRLHSPGSIFSPTEIDLLREAQVFCEPLYMDKSLPN
GELLSSHVDGLAAILAGLRVDSDTLAAGVLHAVPEYLEGYEEELATAFGP
IVAHLVEGVRRVGRIQVLRSANSTDNIGNGSAQIEALRKMLLAMAEDIRV
VIIALADRLQTMRYVAARNVAGRWEAAEVTLNIFAPLANRLGLWQVKWEL
EDLSFRITEPERYKKIATLLEETRRSREQYIALVVDRLQNELGHAGIKAQ
ITGRPKHIYSIYRKMKRKGVDFKEIQDTRAVRILVDEVKDCYAALGLVHN
LWMPIPKEFDDYIAKPKGNDYRSLHTAVIGPEDKVVEVQIRTHEMHRHSE
MGVAAHWRYKEGAKRDARYEEKIAWLRQILEWKNDVEDAGELAEHFKVAL
FEDSVYVLTPQGKVIALPKGATPVDFAYHVHSDLGHRCRGAKVDGVMVPL
DYPLQNAQRVEIISTKQGGPSRDWLNPALGYIRSQRARAKVRQWFSSEMR
TVSLTQARALVEKELQRHGMTAMSLDKLAVEFKFARLDSFLAAVARGDIN
ARQLSAFLSGETESGLPGPETPVIKKQTLTSKPQGDILVVGVDKLLTVLA
KCCKPVPPDPIIGFVTRGRGITIHRANCANVARLSGEGRARLVSTQWDLS
KNASYAVEVEIRAQDRQGLLSDISGVLSREKIDVVATRAHSGDLNATMQF
VIKIGNVDQLQRVLGLIAGVPGVISATRR
>Nmul_A0947 putative transcriptional regulator
MTGGAEAGDGIIFKRSSCPITNGLNIFGDKWTLLVIRDLVLGKRRYADFI
SSPENIASNILADRLKRLETAGLVCRRVYQQKPVRYEYVLTEKGNDLKPV
LEAISRWGKKHCPGTDVFRPVDPPALPVSKTGSTNSDFND
>Nmul_A2411 response regulator receiver domain protein (CheY-like)
MHASIQQQDAEKLPGQMPGSANQESTVAQRIAHIDDDPDIRDTVRRILEA
SGYAVESYQTMNDFMVSLWNSPNPPALAILDVMVETMDIGLEAYVEIRKR
FPGLHLIFMTSLGEEIRPYFTGLSDEWILIMEKPVEPVSFLSIIHNRLEN
KEP
>Nmul_A2231 two component transcriptional regulator, winged helix family
MAATILVVEDEPAIQELISYSLRQAKHTVSSTKNAEEAMKIINHTLPDLV
LLDWMLPGMSGADFARMLRRAARTKDIPIIMLTARADESDKVTGLESGAD
DYITKPFSPRELLARIKAVLRRRAPEAADDVVEIGGLRLDSATHRVTANE
IEVVLGPTEFRLLHYLMTHSERVHSRSQLLDQVWGDHVFVEDRTVDVHIR
RLRKALENVDKDGLVQTVRGSGYRLSAGQAVNAG
>Nmul_A1437 GCN5-related N-acetyltransferase
MMNIELISLLKGNMGLTLTSELAADICVAAYRMETLAQSRDIAQIKPRYN
GRIVFAVERIEDITEEIKHLHRTHWNETEGHRHRLPFQPDYETFIRYEQA
GRYLLFTVRSEGKLLGNCAMYLDKSAHTQTLIATEDTLYLLPEARRGTTA
KRFVRYVENAMKLLGVREINITVKTVNKAARFFRLLGYRHVENGLTKILE
IENV
>Nmul_A0494 transcriptional regulator, MerR family
MAKITPDTPLTPIPAKRYFTIGEVSELCGVKPHVLRYWEQEFTQLKPVKR
RGNRRYYQHHEVLLIRRIRELLYEQGFTIHGARARLGQGFVNPLPVVTLS
SSIDLASLRSEIQDVLALLRS
>Nmul_A1865 NusA antitermination factor
MSREVLLLVDALAREKNVEKNIVFAALELALASATKKRFNEDADVRVSID
HQTGDYQSLRRWQVVADDAVEDPARQISLSEAFRQNPEIQLDEYIEEILE
PVEFGRIGAQAAKQVIFQKIRDAEREQILNDFLERKEYMVTGTIKRMERG
NAIIESGRVEAVLPRDQMIPKENLRVGDRVRAYLHRIDRTTRGPQLILSR
IVPEFLIKLFELEVPEIEEGLLEIKVAARDPGSRAKIAVKSNDQRVDPIG
TCVGMRGSRVQAVTGELAGERVDIILWSDDPATFVINALAPAEISSILVD
EEKHSMDIVVDEGNLAQAIGRGGQNVRLASELTGWELNIMTMEESQAKNE
EEFSVLRHLFMEKLDVDEEVADILAQEGFTTLEEVAYVPLSEMMEIEAFD
EQTVNELRNRARNALLTEAIVSEEKVEHIAEDLLALEGMDSQTARELAAK
GVSTQEDLADLAVDDLVEMVEMDTERARQLIMAARAPWFAPADRA
>Nmul_A1246 transcriptional regulator, putative ATPase, winged helix family
MQTTYLEFHPFRLDKINAILWRNDQVVPLRPKNFAMLCYLAERAGTLVTK
DELLDAVWQRRFVGEAVLKVCINEVRRALGDSVSAPTYLLTVPKRGYRFI
AQVTEVKSSEEVEEVICPVFPKNQRSDKVAYWIDRPSPQARLLTIWQKSL
VGSRQIVFVTGESGIGKSTLIEMFLSTISSQSPGVLRMRCIERFGQGEAL
LPMIEAIEKRCNAPGGGKLVELLYRHAPVWLAQLPSVLRPEERVALQQEI
FGASRERMVREGCELLETLSKVPLILVLEDLHWSDHATLDFLSLLAQRHV
PAYLMVLATYRPIDASQRVHPVTEVHRDLQLRGICSEVALEPFSCNEVKH
YLTRRCPGINIPDSISQALFIRTGGHPLFISNLIEYLMEQHQWSPLSQQI
GIDTALPETIRRVIEREIERLSHDEQRVLTVASVAGMRFSGNLLCSVLGM
EIAEADRCCNALVRRGQILVSDGMEQSTKGVVAGYYAFRHALYLEVFYQR
LSPSETIRMHLRIGEYLEKAYGEQNVEHAGELALHFENGWDWLRAIRYLV
QAADNSTRRFANRQAHDYLARAVRMIERLPDEQQAKTRISLLKQSAAVRR
SMGDMAGAKTDLEKMLAAAKALGDSREQAVGLLELSRVLVLLNRLECLEF
AEQAVSASTALEDKVFHSIVKGMWGGLNLLLRPWREDYSAACHESMDAVR
ATGNPLALHSRLTQHIYVELLASNYQAAATTAVEALALSRVMGDGYMFIA
GHYYYGLTLLHKGEWGRLRETAEQSRRAFEGHDAGLLLRLHRHILLGWLH
VVSGDFSGAKAYCEEALSEGVGAWADFVSVHCSAILGKALHGLKDYAGAI
RCFDAFFQAEKNNALPIFSNYFFPACLGMGETWLALGKLDKARRYAQRLY
DLSSGPSERTYLALSHRLFAEIAIVEESWDEVHSHITKALEIVENAEIPL
AAWRVYATGEKLHYRQDDGKRMGYYRSKKQDEIDQLLNSLQPSDPLRKHL
LNLAGTHECDSLSPVRYSPL
>Nmul_A0041 transcriptional regulator, TetR family
MTNANQRNQRKKQPALVRRRLLDNGARLCVEQGVAGLTLQAVADAADVTK
GGLLHHFSTKQALIEEIFSERLQAFDTSIKQAMKLDPEPSGCFTRAYITA
TLELIEKDDFIQWAALMMAMLTEPGLKKRWTQWLEQSLEQHRDTDSAPEM
RLARYAVDGLWLAGLLDEEERVATKREALHLHSQLIEMTRKP
>Nmul_A2675 response regulator receiver domain protein (CheY-like)
MQTVTVAIADTDAGRRAKLEQSLQEGSGIEVLTDVMSDLDGIPAAHELEP
HKNLVSTEDVIARITQLKPRILFVNLDLSIERECALLEALQRTCPETLVL
LLTDKSVQEEQIIQALANGARGCLSHETDPLYFLKAVRVVDRGEIWVTRQ
MLGKIMDRVLH
>Nmul_A1279 response regulator receiver domain protein (CheY-like)
MDEQHSAPIRVLLIGAYPIVLLGLKNLIESQGERMKMAGQFTRYSLPIPE
LEELTPDVIVIDPDQEPREGMEAMRMLVKACGARIMVFSTFCDPLTCNEA
ILKGAMGLVGKQEPLEIIPKAIEKIHEGQFWLNRTNTYRKAHTPAQGCSI
ARSSWLGGAENKGPYDEGENRRRDRCLEH
>Nmul_A1839 sigma-24 (FecI-like)
MIVEEQVELSEVFMAHRSQLRWAALKILGNPERAEDVVQDAYLKVSEAAA
VFHVKQPVAYLFQMVRNLAIDHHRRISFELNLFEGEDNGLHVPSHIGMPE
ATVISREHLKLVAKAISELPERTRRAFELHRLEGQTHRAIAAELAISTSL
VNILIHEALDHCRAALQST
>Nmul_A2417 transcriptional regulator, LuxR family
MDNLTLFESLLNCDSVEELHSATTTIARAMGFEHFLYGVQVNTSLTRPYR
FILSCYPEEWRKHYDKEGYANFDPTVSHCARTSIPIIWKKEIFKGRRETR
VRNEAKDCGLVSGASFSVHGGRGEAAMLSLATSRESREAQNDILATMAKA
QLLTCYLHEAVQRIVLSKGPLPVKKANLTEREQECLLWAAEGKTGWEIAN
IVKISERTVTFHLQNAIQKLGVVNRQQAISRALSMGLIEPRTIR
>Nmul_A1458 hypothetical protein
MTQLFNFPLDVDFAGTYLQANGVEGPGNKMLSGISDRLEIINGAARTTLY
GTDRQTNYGYRTEIQLGTFPNSGECWSSVDFMIDPSWTTNNFSGLGSWYP
TPDPGEELTVKHVNIGLRLVNRDTLFVNVPAAVLPAVSSTGKTVAIAKIQ
QGRWHNVTIRVNLQTTAVGWREVYLDRVKIFGEYNVPTAYEDATGPSFKM
GPRTLVQDYDKVRMWVRNARQWTGNESFSTVMREAPVSPSRMLRQ
>Nmul_A0542 response regulator receiver domain protein (CheY-like)
MKILIVDDEYRKVEEIFNVLADAGISCAGVKHETTAQAARILLRRQDYDL
LIIDLHLPAAIGGKPDNEGGITFLDMIRLDEKVKLPASVLFITGREELIE
SAYTKVIERGAILCQYHSDSDEWKKILIGRAKYDSQRLARDEQVDVVIVT
ALRNPELDAVLNLPYQWIQKRIKDDPLTYHYGKIPRIDSNISVVAVSPNR
KGMPSSAAVASKLALMFKPKILLMVGICAGIRDKCSLGDIIVADPTWDWG
SGKHGLDSNGSPVFHAAPRQVPLNSALSQVASDLANDESVMNGIRKGWSE
EVPGGKLKVHIGPMASGASVIADDRSARLIAIQQHRELIAIEMEAYAVMA
AAEYTSIPNLTAMIIKSVCDFADAEKNDTWQKYASYTSAAFADQLFRNSN
ISV
>Nmul_A0694 transcriptional regulator, BadM/Rrf2 family
MRLTTKGRFAVTALLDLALQRQTRPVTLAEISQRQQISLSYLEQLFAKLR
SRGLVDSVRGPGGGYCLAKDMGQVSVAEIILAVDEPIDSTQCNGKENCHN
DRKCMTHDLWTKLNELIFDHLGAVTLKQLVDEQREREERRKAREAGVVQM
LDMRKAGSEKVIPDRSRTAVSA
>Nmul_A2579 transcriptional regulator, LuxR family
MMGGEFTLTEREAEYLFRIIDSSINIFRRHQFFLWAQGELQGLLPHGMLI
CLFDEGNGQAVNIERFSRTDMDEIRFSELCRPDGGIVFRAMSAWSAGKNQ
PLLVCPNNSHTPTYKRFSNDLKRENLQRIAAHGMFDTNGRTTCFFTFTQI
SAALSERHAYFLELLMPHMHMALVRMLFHERHHKQGAVGERSRKLITDRE
TEILRHVQAGKSNHEIAQLLYISPLTVKNHIQKILKKLDVNNRAHAVAKA
MALKITL
>Nmul_A2085 transcription termination factor Rho
MHLSDLKNFHVTELVEMAIANEIDGANRLRKQDLIFALLKNQARKGESIF
GEGTLEVLQDGFGFLRSPDTSYLAGPDDIYVSPSQIRRFNLHTGDSIEGE
IRTPKDGERYFALVKVDKVNGEPPENSKHKILFENLTPLFPTERLQLERE
IKAEENVTSRIIDLIAPIGKGQRGLLVASPKSGKTVMLQHIAHAIAANYP
DVMLMVLLIDERPEEVTEMIRSVRGEVISSTFDEPAVRHVQVADMVIEKA
KRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNMEIHLDRRMA
EKRIYPAINVNRSGTRREELLIKPDVLQKIWVLRKLLYPMDDMEAMEFLL
DKIKATKNNADFFDSMRRV
>Nmul_A1799 DEAD/DEAH box helicase-like
MSFESLNLHPLILKAINDAGYTSPTPIQEQAIPELLTGHDVLASAQTGTG
KTAAFMLPALHRLASPSQVRSRGPRVLVLTPTRELALQVSEATAKYGKYL
PRAKVVSILGGMPYPLQNKLLSQVVDILVATPGRLIDHIQRGRIDFSRLE
MLVLDEADRMLDMGFIEDVERIASATPATRQTLLFSATLDSAMDNVAARL
LNSPKRIQVATSKARLNNIEQRLHYVDDISHKNQLLDHLLRDIELKQAIV
FTATKRDADMLADGLSAQGHAAAALHGDMSQRDRNRTLIKLRQGGIRVLV
ATDVAARGIDVAGITHVINFDLPKFAEDYVHRIGRTGRAGASGIAVSFAS
SKDGIHLKKIERFTGQRIASHVVPGLEPRAKPRPGASAQPRSTPSVAHKR
SRTWSSDVPHRSSAYRSDGDWKAGQSRSPAGNRDTWGNTAGSTRAARAGS
GGNGRRDSFGSTTGSSAYFRGK
>Nmul_A0884 ATP-dependent DNA helicase RecG
MQSLATSPISGTIRDKLLKLGITDASSLILHLPFRYEDETHLYPISDVPA
DRTVQVEGTIIRSEVMYRPRRQLVCQVEDGTGVLFMRFLNFYGSQIKAYS
VGTRVRLLGEARPGFFGVEMVHPKCRILRGNEPLPDALTPIYPSTAGLPS
EALRKLISRVLQTGEGGNQEGTLCETLPESIRKRCQLQGFKDSVLFLHQP
PPNASPALLRERTHPAWQRIKFDELLAQQLSMRVHYQQRRNGSAPVLIAK
NDLTRALLKLLPFDLTQAQKKAFAEISRDLTEPHPMQRLLQGDVGSGKTI
VATLAVLQSIENNFQAALMAPTEILAEQHYRKLSTWLAPLLEPRGLRIAW
LGGNQKKKERETTLADIAAGNALLAIGTHALFQNQVEFDRLGLVVIDEQH
RFGVHQRLALREKGAGAYAMPHQLMMSATPIPRTLSMSYYADLDVSVIDE
MPPGRAPVVTKLVADARRDEVTARVREACREGKQAYWVCPLIQESEALQL
KTALETHQGLTGTFPELRIGLVHGRLSFQEKSDVMEAFARGEIHLLVATT
VIEVGVDVPNASLMVIEHAERMGLAQLHQLRGRIGRGAAGSVCILMYQPP
LSPNARERLKIIFENTDGFEIARQDLQLRGPGEFLGARQSGLPMLRFADL
ERDKDLLDTARTIAVELLRDYPEAAKRHLHRWLGRKSEYLRA
>Nmul_A0238 transcriptional regulator, LuxR family
MGFFPPFTDDHLQRYFRILQEGTAVRRHFDLLKWLQGEVQHYLPHEILLA
AWGDFGSNNVQYDIISPLPGLRTAQLQLARLSPLLRVSYNRWIEVGRIPC
VSRVCEAQLDVSGILQGDGAAHCPFGRALRNMRSSLFHGISDERGHHDCL
YVVFSSKDKLDDSTLIAMEILLPYLDTALRRVTPLPQHSCRPSLLADAPE
YDLHGLSEREVEIMTWVRKGKTNAEIGSILRISSYTVKNHLHQIFRKLDV
YNRVQAISKIEQRVGHG
>Nmul_A1779 putative transcriptional regulator, TetR family
MVTADQIVNTAVELGEQKSWEAVRLHDVAAALGITLNDVHAHFREKEDIV
EAWFERADSAMLRIARAPDFSFLTPRQRLHRLIMAWLASLYPYRKATRQM
IYGKLEPGHLHVQIPGLMRVRRTVQWMREAAGRDATYLRRALEESALTSI
YLATFAHWMNDSSSGSSRTSRFLDGCLSVGENLDRMLFFHRRGGERTDSG
EAPQGT
>Nmul_A0524 conserved hypothetical protein
MRKILPSLLLFVVSVGHATDASVRPGLWEITTTSMLLALVPRIPPEQMQQ
LTKLAKQYGLDLPRIENGAATSRICITRKMADQEIPSYLHVHEAGCSIQN
AIRTGNDYKMDLVCTNPQLQGKGRAEGSFTTPESFSGWTVFTGTMQNTPV
NEHADTTGRWISANCGKIKSPR
>Nmul_A1629 putative transcriptional regulator
MLNTIGERQKQLLKLLRGSRPGLSVDELSKGLEITRNAVRQHLSSLEGAG
LVTAGNTRPSGGGRPQQLYVLTELGKESFPRQYSWLAQLVLASVRREEGV
ENMGKRLSEIGAGIAEQIRGQYPDLNTKEEKIDKLTEVMDQLGYNAKSAT
LPNGEKVIEADNCVFHQMAAKDMEICHLDRGLMETFTDSKVEQHECMARG
GELCRFRFVSKKE
>Nmul_A1746 sigma-24 (FecI-like)
MGDREIDQQLVERAQHGDKQAFDLLVIKYQRKLARLLSQFIRDPSEVEDV
TQEAFIKAYRALPSFRGDSAFYTWLYRIGINTAKNFLVAQGRRAPTTTTG
FDSEEAEGFEEASQLREMNTPESELTSKQIAQTVNQTLEELPEELRTAIT
LREIEGLSYEEIAAIMNCPIGTVRSRIFRAREAIAEKLRPLLGTGKDKRW
>Nmul_A0728 two component transcriptional regulator, LuxR family
MAASKAQVMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAG
HHADIVLMDVSLKTLSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALR
AGARGYVMKQEPGEVLVTAIHEVLKGNIYLSKPMHAKLLNRVAGGNSEPE
PLINSLTPSEFEVLHLIGSGHSSQEIAKLLSRSIKTIETHRFNIRTKLNL
KDGADLIRYATHWSEAQ
>Nmul_A1753 Ribonuclease III
MGTAYRNTESAALCRKLGYTFRRPELLRQALTHRSHSIPHNERLEFLGDA
VLNCAVAGLIFHHFPDLSEGSLSRIRANLVNQKMLAELAQTLELGKLIRF
GEGELKSGGDKRPSILADALEAVIGAIYLDAGFEQAEKTVENLFIPSLGE
LNTHALGKDPKTLLQEYLQSRKLALPRYAVVATRGEAHQQQFQVECVISR
PQIRTLGEGTSRRSAEQHAARQAYEQLQSH
>Nmul_A1234 putative transcriptional regulator, CopG family
MERLTISLNDQLAKQFESAMHKLGYFNRSEAVRDLIRNMIETARQEEQVD
GYCIATLSYIYNHHERELARCVTSTQHNHHNLTLSTMHVHMDHDNCLEVT
ILRGTIKSVKNFANLVTATPGVRHGKLHLLPIEIVQEHDFHESEPHVHSS
PLT
>Nmul_A2081 putative transcriptional acitvator, Baf
MNPLLLAVDSGNTRVKWGLHDGRNWLMQGVAAQGDRVQLEREWRDLREPS
RVVISNVANAGVKGSLSELLAQWKAEPQWITAVPYQCGVRNYYSNPAQLG
SDRWAALVAAWVLERQGCLVVDAGTAMTVDALSDTGEFLGGLITPGLDLM
QKILVEDLGSLESEGGKFCDYPDSTADALYSGAVHAMAGAIERMAALLAG
TLGHMPECILSGGAAQQLQPQLNVNVKVMDNLVLQGLLAIARETSETASG
GVVASPEDSIEN
>Nmul_A1666 hydrogenase accessory protein HypB
MCNTCGCNITPGNREFAYKPVNGMTPVSVLKNLLAKNNDQAEHNRRHFDR
HRLLTVNLMSSPGAGKTALLEASIDALRDKYRIGVIEGDLETENDAVRIR
ARGAPAYQITTGSACHLDAHMVHDALHEFPLEELDILFIENVGNLVCPAS
FDLGQHRNVTLLSVTEGDDKPAKYPVMFRAADAVILTKSDLLPVLDDFDP
ARAELSLRNLGSRAPVIRLSARKNLNLGDWLDWLIGELVQKRGKLAADVL
AQPVADPQSILSNTGMGG
>Nmul_A1953 VacB and RNase II family 3'-5' exoribonucleases
MTIKKKQKLRKLDPYLEREKEHYGHALPSREFILQILEEQGVPVPEEALQ
NLLGITEEEGEIFSRRLSAMLREGQIMRNRKGDICMVEKLALIKGKVQGH
PDEFGFLIPDDGSPDLFLSAKEMRKALHGDRVMVREIGVDRRGRREGAIV
EVLERAVTQLVGRLHADHGILYVEAENRRISQDILIPREESMNARAGQVV
IVEILQQPSKHAQPIGRIIEILGDYTAPGMEIEIALRKHDLPYQFPQEVE
KLSARLPSKVLKKDLIKREDLRHLPLVTIDGETARDFDDAVYCERDGKDY
KLYVAIADVSHYVKPGDALDQEAYNRGNSVYFPRRVIPMLPEALSNGLCS
LNPEVDRLSMVCEISLDFAGDFKGYRFYPAVMFSHARLTYTKVAAMLENS
KGEEAKQYKDLLPHIQLLYKLFKVLLKARNLRGAIDFETIETRMIFNDEG
KIERILPIQRNDAHRIIEECMLAANVCASDFLQKHKQATLYRVHEGPTPE
KLAALRDFLKEFGVQLGGGDNPRAKDYARTLSTIKDRPDAQLLQTVMLRS
LRQAVYSPDNVGHFGLAYESYTHFTSPIRRYPDLLVHRAIKAVLNKAAYS
PGNWHELGEHCSQTERRADEATRDVEAWLKCYYMQDRIGECFEGVVSGVA
GFGLFVALDGIYVEGLVHVSELPSDYFHFDAVRHMLLGERTGKRYRLGDR
LRVRLVRVDLESSKIDFVLAENAQDAGKIKTEAVS
>Nmul_A0007 two component transcriptional regulator, Fis family
MTTTLPMTEVDDRPALLIVDDDQTFCTVLANAMTKRGFTVTCAHNVDQAL
ELAEACAPEYAVVDLRLPGPSGLSLVEKLKALDPGTRIVMLTGYASIATA
VEAIKLGATHYLAKPVDVHEIMAAFERTTGDADVQISAHPLSVGRLEWEY
IQRVLNENKGNVSVTARVLNMHRRTLQRKLTKYPAKT