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# Clostridium tetani E88, Massachusetts

>CTC00684 transcriptional regulatory protein
MFPIFNIKDGQIAYEEIYKYLKEIIKNGMMPSGSKLPSSREMATMTTLSR
NTIIRAYELLEEENLVYTKRGKGTFVSDIKISENNDWKIDWYSKINEYGK
MSEDLDIMKTEALYKKGMISFKSIAPDEKLFDVEELKRAFLNRVSLEGEK
ILNYGYAKGYKPLIDYLLEYMKEKGVNIKNKDILITNGFTEGFDIVLSSL
LNEGDKIICENPTHNTAIKLMRLHKLDIVGVTIDDKGVDLNQLENKLKNN
QVKLSYVIPSYHNPTGRVMSFKRRKKFYEILKKYNVPIVEDGFNEELQHS
GTHIAPIAAIAGEENSIIYIGSLSKILFPGMRIGWILADKRLIDILESVK
RSRNIHTSFLDQGILYEYMNSGAFEKYVKKVKTIYKEKYEYIMKLCKEEI
PNKYILGDGGLYIFIKLKNIKSRELLKACLKRKVIFTPGDMFFIDNEGED
TLRLGFSRNSLEEIEKGIKIIGEEARSILNK
>CTC00608 RNA polymerase sigma factor
MVLSLGGDIMEFIEDVKSAQAGNKASFVKLIRHYEKYFYVVSKSILDKDE
DCADAIQETILNCYKNIKSLNNPKCFKAWFTKCLINNCYKILKNNKKIIL
LDEIEDKKYSKDEFYLVELNHLLSTLDEDLKTVIFLYYFEDLSVKDISNA
INVKEGTVKSRLHRARTKLYDILRKDGEAVSYERQVNR
>CTC00639 transcriptional regulatory protein
MSNSNLMYRLLIIFQTRQNITQKVGNNRLKKDKIYVQTGVMIMEWIEGID
EVINYIEENITEEITIKNIAKKTFMSPFYFQKGFAMLCGFTVGEYIRQRR
LTLAGSELVSTDEKIIDIALKYGYASPDSFTKAFTRFHGVTPTAVRKDGA
MIKSFAPLKIKFLLEGGYIMDYKIVKKDSFTIIGVSKVFKYDSAATEIPQ
FWTEHYQTGKEKFVCGMYGVCIDESMGSDEFEYLIADNYNPSIEIPNGFV
TKIIPKHTWAVFACKGAMPKSLQDGNRKIFSEWLPNCKDYEIAAGYYIEM
YTNVADYPQGIQDENYYSEIWIPVKKK
>CTC00704 conserved protein
MVICMKYIKTKCSKSLRVLTIYERLSTGGIINKKELAYEFGVDEKSIQRD
INDLRAYFQECYKEDVRIKYCRSRKGYILEKDKFSYLNYKEITAITKILL
DSRAFNKKEMSLLLNKVILQCIPGERENIKNILNKEVYNYVELQHGKKLI
DILLDIEECIRKRKYINIKYKRVDKSLINRKLKPIGLIFNKFYFYLIAYI
ESKEEDFIATYRVDRIEEYKIFEEYFYISQKNRFEEGEFRKKMQFMSSGG
LINIKFYYWGPSLELVLDRLPTAEVIGEENNKYLIKANVLGKGIITWLLS
QKNFLEVLEPFEIRNEIKNIIKDMLNIYI
>CTC00643 putative acetyltransferase
MPARQMDLLANTSENKFIKNYLKGGTNMEHTIKDFNKIKDIDLIMKIWLN
SNLQAHDFISDRYWIENYDEVKKLLPQSHLRVYWKDEQPIGFIGIVDGYI
AGIFVDSNYRCQGIGLALLEDAKKQYNKLSLDVYEKNQGAFRFYKRNGFQ
KVSSKVDDINKEIEYHMIWKKK
>CTC00707 transcriptional regulatory protein
MFRRRAFMFSKVNKYCDYSIRVGAIIINNLGEIQFMSDECRKILCAREYS
YNHIQQLIPCFNMKDLINSSTKRKIKLNNKKLNMEVISLKEECMKEFLIT
LIDANVIDVMYEELKAKEKNLKILSFILELAYDGLVVIDKYGYITMINKT
YADFLGVDQERSIGKHVTEVIESTRMHIVAKTGIAETAQLQKVKGKYMIA
NRIPVIENGELVAVAGKVLFKNIKELDLLYKKIRNIENEYKKYKGQFDES
NSASYSFDNIIGKSDKINKTKDLAKKAAKTNSNVLIRGESGTGKELFAHA
IHMESERVYGNFIKLNCAAIPRDLLESELFGYEGGAFTGAKKEGKIGKFE
LADGGTIFLDEIGDMPLHMQAKLLRVLQEREVERIGATRSKKIDVRVISA
TNRDLEKMIKEGEFREDLYYRLNVVTVNIPPLRERREDIKILSEYLLEKI
SKKLGKKTKSFSKEAMSCLMNYKWEGGVRQLENIIERAVNLVEHNEMIEP
KHFPGNIVSNKYIVEDSDLNKLINQVEKDIILETLIYCNWNKTLAAKKLN
ISRTSLYEKIAKHNIAI
>CTC00848 transcriptional regulatory protein
MNILIAEDEQDIRELLGLHLIKEDYNVYEACNGIEALDVFNKNDIDLAIL
DIMMPGLDGFKVLKKIREKSNIPVIFITARGEDENKILGLGLGADDYIVK
PFSPMEVVARVKALFRRVGTYSQNSSKDINKIENGELSLNKDSCTFYKNG
NPIELNAKEYKIMEFLMENKGRVHTKKQIYEKVWGYEYYGDANTIMVHIS
HIRDKIEDNPKEPIYLKTIRGIGYKLEKVE
>CTC00630 transcriptional regulator
MNRQMYEWQKQIQIIVDEIDKCIKNYNDEALTLRFLSHRLGYSKFYTTRK
FKEISGMQFRDYLRHRKLAFALKEVRDSEKSILDIAVDYGFSSHEAFTRA
FKGTYGVAPSEYRKKPNPVVLRTKINPFDRYFLGLGEIGMMKSTDDIKIY
FVTIPAHKFLHIKNYESNGYWDFWQKQSLIPGQDCETICGLLDSIKGKLD
DDGGSESNSGSGQIMAYINDPDGRLCDWGIPRTECYGVRLPFDYKGEVPP
QMLMIDVPEAEYIVFEHGPFDYEQENRSVEEKIEKAMATFDFAGTGYCFD
TSPGRIIYFYFNPERFFKYIRPVRR
>CTC00610 accessory gene regulator protein A
MNKKKRSYKLKYNHRYIIVLFKDINYIETIKNNRKVVLCTSNSRLEFYDI
LKNLSSLLDDNFIQIHRTTIINKNYIKNVCKNYNNPYVILKDDVKCILSR
SGLKNVMKYWI
>CTC00618 RNA polymerase sigma factor
MRRKVGIQLNKDAFVEKVLEAESTLYHVSKSILIHDEDCEDAVQNAILKA
YNKLDTLKKEEYFKTWLIRILINECYSLKRRKHPMVSYEEYFEYAKAKDK
EDYSELYFAIRQLPNRIRITIVLYYVEGYSVEEIKQILKIPSGTVKSRLA
RGRKLLKIELEHMEVTYE
>CTC00597 two-component response regulator
MKERILIVEDDEEIALCIKEYVEKTGYEVLWASTGKEGYEEFKRENFSLL
MIDIMMPEMDGLTLCKNIRLTSDVPILIISAKNEDGYKVKGLNIGADDYI
TKPFSLVELQARLESHLRRYRRYNGIENNEHILKFKRGLIIYQEGKYVEV
DGRNIHLTSKEFELLMLMAENPKKTFTKSELYEILWGEKDVHGNNTVTVH
IKELREKLKENIKNPNFIETVWGVGYKFIGEVLP
>CTC00805 two-component response regulator
MNKNTIIVVDDEKEIRDLICIYLENEGYRVIKAENGIKALELLEKEKVDL
IILDIMMPNMDGIEACTKIREEKNMPIIMLSAKTEDMDKIWGLTAGADDY
MTKPFNPLELIARVKSQLRRYKKFNVQNGYINDDIIEIDELTINTATHEV
QVGEKKVRLTPREFDILELLARNKGIVFSIEKIYERVWKEEFFKSDNTVM
VHIRKLREKIEENPRKPKYVKTVWGVGYKVEKL
>CTC00665 RNA polymerase sigma factor
MGEERQSGYLDEKYIYEIYLKDKSLALKMIIDEYKDFLYRFSFYLCKNSM
ESDDLFQDTWVKVIKNIHKYTWNETFQPWIRTICLNTYKDKYRKSKRWLN
IIKDYFDEEKKEREIINFPSKNNLPEKETIKNEEKKILKKAVDNLKDEYR
IPIILYYFERLSYKEISEIISIPEGTIKSRLNKARKLLKEYVEVELNG
>CTC00657 DNA/RNA helicase
MTIKNKSTKEEFIKGNLVNKEIQLSTNCITGDRDHLLDKLRQAFKKAKKI
DIIVAFLMESGVRLLEKDLKDVLNRNVPIRILTGNYLNITQPQALYLLKD
ILKDRVDLRFYNISGKSFHPKAYIFEYDNKDGDIFIGSSNISKSALTSGI
EWNYRIRKEDNELDFQCYKDIFEDLFNNKSIIVDDNELDKYSKSWRKPKL
FFDMENKEKTEEKIISYPKPKDAQIEALYKLKKFREEGFDRGIVVAATGI
GKTYLAAFDSSKYNKVLFVAHRQEILNQAETSFRIVRKTNNTGFFSGNRK
DRNKDVLFATVQTLGQKQYLCDDYFKEDEFDYIIIDEFHHAVADNYQNIL
DYFKPKFLLGLTATPERMDNRDVFEICNHNVVYEVRLKEAINKGWLTPFR
YYGIYDDVDYNNISFKNGKYDDKELEEALMINKRGDLILKHYNKYHSKRA
LGFCSSRNHANYMAKYFSEKGIPACAVLSGEKLEYCIGRKEALKKFNSGE
IKVIFSVDMFNEGLDVPSVDMVMFLRPTQSSTIFLQQLGRGLRKHKNKKY
VNVLDFIGNYKKANLIPFLLTGVIKNIDEKSKKTIIPTEEDFPEDCHIDF
DFRLVDIFKKMREEQKKIIDLVIEEYYRIKHELKRRPTRLDMYKYIDDNI
YNNIRTKSKINIFNDYLGFLNKLEELDEEENRFIGTKAHDFIVKIETTAM
TKTYKMPLLLAFYNNGDFKLKVSEEEIYLSFKEFYKKPSNAVDLIRDKNG
KNYKEWGREEYLKVAKNPRNAFINTAKEFFIDKGETYEITDELEDYVKNK
YFISHFKDVIDYKTSEFYKKRLEKREELNK
>gid:173200  CTC00072  signal-transduction and transcriptional-control protein
MGSYLKGIQAPVIKYANIISQILQVEVEIVDENLIRIAGTGIFKNKINED
MSKEGYVYKKVLKHGKDQIIYNPGKDELCIPCPSRDSCGEKFEMSSPIKL
NNKIIGVIGLICFEEKQKEHLLNKFDIHMAFLRQISEFISIAAHEKKEEE
KKENLIQLLNTIVDKVEEGVLILDKEDNITHINQNALKYLNISSKGKGYK
VSIEDIGDSILEFKEYIVTIENEQFNLLGSIYPVNLNETRYDRMFFFHDL
KEFKEKINKLSGAEKHINCNDIIGNSKKVLKLKETIKKVASSISTILITG
ESGTGKEMIARAIHNESNRIKNPFVAINCAAIPESLLESELFGYVRGAFT
GADSMGRIGKFELANRGTIFLDEVGDMPLFLQAKLLRVLQERKVIRIGSN
TAVNIDVRVIAATNKDLISMIKENKFREDLYFRLNVIPIESPPLRDRLQD
IKMLTEYFLDKYLNLFNKRFRKIKIDEDLMQIFYSYNWPGNIRELENTIE
FMVNMMRPDGILTKDILPQNILYERLKKEKISTEIHTLKELEKRAIYEAL
NICGWSTEGKKIAALKLGIGIATLYRKIEEYNLSK
>gid:173237  CTC00101  stage 0 sporulation protein J
MLIKGKLRGMVVMKDNINYVSTELICPNLYQPRKVFDEESIDELAKSINS
YGIIQPLSVRKLSDDNYELIAGERRLRAAKKIGLEKVPVIVIDVTDRESA
AIALLENIQREDLNFLEEAEAYQNLITEHNYTQEQLASVIGKKQSTIANK
IRLLKLPQNIRLKLIENNLTERHARAMLRLPSEELQNSIIDLIIKKGLNV
KNTEEAIDKELLKLDNKDIGKDGKKRIKGIFGSKIYINTVKQVFDKYGVS
AKYKSKDYDDKIEITITIPKK
>gid:173245  CTC00109  conserved protein
MKKNGLNIMRNIQIVESLKAELICIIGDFYKLLTKGSNVAQGALLDCISG
AITILYILADRLGYSHTAVDENIKKKLKMGIIENDEVEVEGKDLSRLYTH
LKERQ
>gid:173284  CTC00144  acetyltransferase
MYQVYISEDFIVTTDPKKIDVNAVCELLSRSYWSEKRNREIVEKFIENSL
CFSLYHKDRQIGFARVVTDYITFGYVRDVFIHEDYRGKGLGKWLINCVIT
HPDMINIERLMLATKDAQTFYQYHGFGQLQKPEAFMERLGTINKATIGEL
NIATS
>gid:173293  CTC00153  transcriptional regulatory protein
MSIKLDLYKIFSEVAKHKSFSKAAKSLYMTQPAVSQAIMQLENELEIRLF
TRTSRGVILTNEGELLFEYTNSAINLINVAEKKLIESKNLLMGDLKLGVG
DTISRYFLLPYLEKFHSSYPNIKLKIINRTTLELCVMLKSGEIDIAICNL
PINDPSLEVTELTDIHDIFVCGKKYKNKISKSISLKELSKFPLILLESKS
NSRQYVEKYMLSKGIPFTPEIELGSHDLLLEFAKINLGISCVIKEFSQDY
LKSKELYEIQTNEVIPKRNIGVCFLKSVSLSPSSTKFVDILKK
>gid:173302  CTC00163  transcriptional regulatory protein
MVIFIMNSNINILVVEDDTDINNLLCTMLNKQGYKVTSAYSGSEAKMCLE
KQDFQLILLDLMIPAISGENLISEIRKFKTMPIIVISAKPGQDIKIKVLK
LGADDFICKPFDTNEVLARVESQLRRYTVFSSKNKEKNILTYKDLSLNKE
TLEVAVKGEYISLTAREFTILELLMSNQKKVFTKANLFEHAWNEDFFCDH
NTVNVHISNIRSKLAKINPDIEYIHTVWGIGYKINDKT
>gid:173312  CTC00173  predicted transcriptional regulator
MSRVGRNIKTYRLEANMSQKQLGKKIGVSENFINEIETGKRIINENLIDR
IGKILNKDLNDITMFYEDMKDEKENKVYDIKENKVQEVWKEAFGSVLRDV
NIFDYSLNKTLGSRRLPVIDNKVNGYPQDKVFYLKVEDNDMNGFRVFKED
LVLCHITGEIQNNSIYLIEHNDKRQIRQIKNLDNSKFLLISNSTMVNTEA
VEKKQVKIIARLDKVEINL
>gid:173327  CTC00189  transcriptional regulatory protein
MFIYDKLNIYVIVGGIKMINGKIAKILIVDDDQNICEVIKMYLESAGFDT
RVCHDGKESQSIFIEYNPDLVLLDIMLPSMDGIDVLKWIRKEHETPVIML
TAKGETFDKVLGLELGADDYMVKPFEPKELLARVKAVLRRFNSDNVSKEA
LQFNGLTIDIDSYTVIYNGKEIKMPPKEFELLYYLASNKNRVFTREQLLC
EVWGYDYPGDSRTVDVHIKRLREKLEEGSNWQIETVWGVGYKFEVK
>gid:173331  CTC00194  transcription-repair coupling factor
MNFIMRLNGILKPLKDSKEFKDIKDNIKSEEYPINIIGLEDSSKSYLIKG
VYDEIDKPLLILTHSDIEAKNIYEDLFFYEANVHYFPSKEVVFYNVDAIS
GDLRWERLKIIKHILEPGKKIIVTSIESIAPICIPLNLYKEYFFKFSIGD
VVDYKDLSEKLLKSGYDRVDLVYNKAQFSIRGGILDIFPPTSSEPYRIEF
FDNEIDSIRNFNTESQRSIEKVDCIEVFPAKEIILNKENIDSACEKIMMD
LKKVRNNLDSLNNKESFDKLKNTIDKNIESLKETWGFETIDSYLPYLYDT
TTSFLNYFKDCFVVVDDIQRCQGKLDSVYYEYYDSYDSFLKRGDILPRQG
ELLIPKEDIWEALEESKVMTLSVLPKKTDVLKERQTVNFKEITSQNYQGQ
IDLLIEDIEKRKEEKYKIVILAGTRARGERLVDTLRDRGIDSVYRDVIDK
ILPGEVVITFGSQIKGYEYPDFKLCIISDKEVFGEAKRRKNKKLTNKKGF
SRIKSFTDLKPGDYIVHVNHGIGVYKGIKQLEVGGHRKDYLELTYYGDDK
LYVPVEQLDIVQKYIGGEGKTPKINKLGNAEWTKTKNKAKKSIEEIAEDL
VNLYAVRSTLKGYKFSKDTVWQRQFEEEFPHEETPDQITAIEEIKNDMQS
NRTMDRLLCGDVGYGKTEVALRAAFKSVMDGKQVAFLVPTTILAQQHYNN
LLKRFSDFPINIEMVSRFRTSAQQNATMKALKEGNIDILIGTHRILQKDV
QFKDLGLLVIDEEQRFGVKHKEKIKEFKKNVDVLTLTATPIPRTLHMSLV
GVRDISIIETPPEDRYPIQTYVVEYNDQLIRDAILRELNRGGQIYFVYNR
VENIKEIATHVSKLVPEAKVGIAHGQMKERELEKVVMDFMNKEHDILVAT
TIIETGMDIQNVNTMIIYDSDKMGLSQLYQLRGRVGRSSRMAYCYLTYKK
DKILTEVAEKRLKAIKEFTELGSGFKIALKDLEIRGAGNMMGSSQHGHMA
SIGYDLYCKMLEDTIKEKKGERKREPINIV
>gid:173333  CTC00196  stage V sporulation protein T
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFTDREGGVILKKYS
PIGELSEFSKGYAESLQQTIGNIVIICDRDMLISVSGVQKKEYMDKKISF
ELEKIIEERKTILISKEREIIPLYDDEEFEEKYATQVISPIIAEGDAIGA
VIIVSKDKDEEFGEVEMKLAETASSFLGKQMEQ
>gid:173343  CTC00201  stage II sporulation protein E
MIKMQYGIDILPYERIKRRDEEGKSSKNILIKELIKLIVYFLASFLISRV
VMVNLMAPFGIAFLISNMLEEENSIKLTSALGTIVGYISIHSSVKDIWMY
LILVPLIILNSYILRNKKEKSIIKSVFILVFLEVTIYNRFKLHISPLMSI
TNSIFQTSCVFSLYYIINYSKICAKGFKTKHLFNSEEIISMCITLSLIIS
GVRGLNIFGLSIRNIIALSIIVMIGYIKGSSVGGACGVAMGVIIGISTND
MTTFVGVFGICGLISGIFKESGKVISGLSYVVAFAILKLYSDIGIQFEFR
EVLLGGSIFLLIPNKIYKKIETDLDWEMKSENIKDDYISKVKDIVQEKLT
EFSQLLLYMGDTLENLAENHNLQMKKKSSSIVEKLADRVCSGCNMKHMCW
KREGFYTYSAFSELINNFENKKKVIPNEIERKCIKRSVLVKNAEEIIKNY
IIDEMWKKRINEYRNFLAEQITNISYSVEELTENINSQVHFNKYLENDIR
RILNKNKIKYQDIFAYNDKLGKIIVKIHLSPCGGKQKCIKEILPFINKVT
GKIMCISDDCCNIDSNNERCEITLEESPKYHVATHAGAVCKDGETYSGDS
YTYGKLKDGKYITVISDGMGSGPEAGQESNAAVNLIEKFAKIGFDRINAI
NMVNSLMTINFSENEKFSTVDLSDINLYTGEVDFMKVGAVPSFIKSNGKV
EVISSKTLPIGVLDKVDVDLVKKDIDNGDIIVMLSDGVLDYDDTEIGKVD
WIVKYLEETNMNKPEDICKDIMEKAKLLRKGKVKDDMTVVVSKVYSLY
>gid:173348  CTC00207  putative transcriptional regulator
MILVLDAGNTNMVLGLYEDKNLIADWRLSTDPLRTADEYSIQVIQLFLQS
NLRLEDVEGVIVSSVVPNIMYSVEHMVAKYFKKKPIIVGPGTKTGINIKY
DNPKEVGADRIVNAVAAHEIYKKPLVIIDFGTATTFCAVTQSGDYLGGAI
APGVKISSEALFEKAAKLPRVELMKPSSVICKNTVSSMQAGMTYGYGGLV
DHIVSKIKQELMDSGEKEPLVVATGGLAKLISEESETIDIIHPFLTLEGL
RIIYEKNKDLDA
>gid:173362  CTC00216  regulatory protein, sir2 family
MDTRKNLKELIKSSSNIVFFGGAGVSTESNIPDFRSEEGLYKTKSNFSYS
PEVMLSHSFFKEHTEDFFDFYKEKMIYKYAKPNLAHHALAKLEKVGKLKA
IITQNIDGLHQLAGSKNVIELHGGVGRNYCMDCNKFFDLNYILNNKEVVP
KCDVCGGIVKPDVVLYEEPLNMDNINNAVRYVENSDVLIVGGTSLVVYPA
ANLIHYYKGNKLVLINKSSTPYDRKAQIVINDSIGSILGGIVEELGY
>gid:173377  CTC00230  transcriptional repressor
MNKKYVVGIDLGGTTISGGVLDYEGNIVFRHTIDTKSELGEKIVLERIIK
VIDYVIKKSKIPKNNIKAIGIGSPGPLDIEKGIIITSPNLPFKNFNIVNP
IKNHFKISVYLDNDANAAAVGEYKFGSGKGSRNMIFITVSTGIGGGAILN
GNIYRGSSSNALEIGHMTLKEDGAICNCGNFGCAEALASGTAIAKKARME
LNRGKESSLKKLKKISAYNVFQEAKNGDKLAQEIVDEALEYLGICVSNII
ITFDPDTIVIGGGVSKAGDIIFNKINQVVKERCFEAMWKNTKIIKALLLE
DAGIIGAASLAIFEESK
>gid:173406  CTC00263  predicted catabolite control protein A
MPASIKDVAKEAGVSIATVSRVLNDIDVVNEDTKKKVLDAIKKLGYRPNI
VARSLKTQRTSTIGIIVPDISNQFYPEIVRGAEDVANIYEYNIMLCNTDL
DTEKEKEYLRVLKEKMTDGVLYMSNSLENETVELIKELRIPTVLVETTDE
NKEFPSVSIDNKKAAYEAVKYLINKGNKKIAYIGPKDEKNNAVALRYKGY
KKCLEENNIEIKECLIYRSGLKAGDGYEAMEKILKEESIDSVFCANDEIA
MGAINALRDKGINVPEDVDVIGFNNIYSASIFYPKLTTISQPMYDMGSVG
MRMLIKTINKEPLEKEHYVLNYNLIERDSCKK
>gid:173416  CTC00273  spore coat protein
MITMMREFEIERQFDIKIEKLKPNKGVYFLRTNEGTRCLKKINYGIQKLL
FVYGAKEHLVKNGFPKVDRYYMNTYGEPFAIVNEDIYTLSEWIDGREADF
KNKEDVANAAKSLAHMHIASKGYEPPENSKLKTDLWRWPSLMNKRVRALE
KMRHMTRKRNNKNEFEMNYIKNVQFYKDLGIRAINVLESSAYEDLCKISE
EDKNFCHHDYTYHNIIIDEDDSINVIDFDYCKREIRAYDISSFMIKVLKR
VDWDIEYAKLILESYNKEYPLREEEYRVLFAFLLFPQRFWRLSNRYFYNE
TNWATKSFDRKMSRLIDEQDAYMKFIENFKTDYDQKE
>gid:173420  CTC00277  transcriptional regulatory protein
MPIIKKKYGEGIKIDLTKNQIDLLATKESIYRNYLGFENKYRLILYLLKS
HYSRTLQEISNFLGVSRSTTSKYLDEIEGYLREKGVQLVRRRNKGIYIVG
RELQKRRIIYDIILHSYDYSRIHGLLQPETIYDLMIWNYFYGIDIKHIWE
LLIDTLKAINISVSDMAFYNIIINTCIMIKRIQQDFIADIEYEKMDYISE
TFEYDEAKNYCNELSKRYNIIIPKTEIIWISMHFLGANPIKFLEDDIFSN
IKERHKLVNSIEKMVSQFEKEVDIALENKDEIINGLFVHLMPAINRAKYS
IKIKNSYKEDIKNSYNEFYTITANLVRIINNEFNVELGSDEISYVCLHFV
AAIEKMNKSYATKKRIIVVCSTGVGTSKLLANKLRNSYDDIEIIDILSYN
QFISRNTFDIDYVISTVALKEANVPVIVVNPLINDEDKKQLSKIFSPKVK
EKIINVESIINVVQKHCVIKDLTALKKDLKKNIIGEIQDEMLHIRDLLVC
EAIITNVEVTDAKEAIKISGNALKQLGYVNDNYVKSLVNCLNKRGKNGPY
IVISHGIALPHAKPEDGVYKTGFSMVILKEPVKFNHKKHDPVQVIISFAT
KNNQEHVKALEEITSFIMLRKNFKNLIQCKDSKEVILLLENFKEEGECSI
>gid:173438  CTC00296  transcription termination factor Rho
MFKFFWRCYFLSSNDLDKLTVNELKEIAKDLEIKGVYKYKKNELIEEIKK
VSPMHIEKNGVVLREKIVPKSGKSKPEGINIEENSNRVESFQGDKIEDRR
KEQDNNKQEENKREKLREMINESDTAKGVLEIIENNNYGFLRGKNYLTGP
DDIYVSPSQIRRFNLQTGDEVEGKVRTPKEGEKFKALLYVQKVNGENPEK
AVRRRPFENLTPIYPQERIKLENSSSDLSSRLMDIISPIGKGQRGIVVAP
PKAGKTTLLKKIAQSISINHPDMKLIVLLIDERPEEVTDMQRSINGEVIY
STFDEEPEHHTKVAYMVLERAKRMVEQGQNVVILLDSLTRLARAYNLTIN
PTGRTLSGGLDPGALIMPKKFFGAARNIEEGGSLTILATALVETGSRMDD
MIFEEFKGTGNMEVHLNRKLQERRIFPAIDIYRSGTRKENLLLSEKEYEA
SFNIRRLLYDENNTQNVTEQLINMLCKTKNNDEFVEVISKIDLSKEKNR
>gid:173474  CTC00330  transcription accessory protein
MIDIKERLAKELNISIKQVESTVNLLDEGNTIPFIARYRKEVTGGLTDLT
LRELFQRLTYLRNLNGKKEDVMRIIDEQGKLTEDLKSSILKCETLTEVED
IYRPFRPKRRTRATIAEEKGLKPLAELILLGEFKEDLKEEAGKYINNEKE
VNSSEEALAGAVDIISEIISDKAEYRKWIRSFVNKEGLIETSGESKEPTP
YEMYYSYREEVKKIPSHRILAINRGEKEKILSVKITCDMGKIEIYLKSNL
LKDNNITDKYIEESVSDSLKRLIYPSIEREIRGDLTDRAEKGAIDIFKSN
LKALLMQPPIKGKTVLGYDPGFRTGCKIAVLDDTGKFLDKSTVYATAPQN
DVEGSIKALKELIYKYDVDVISLGNGTASRESEEVIGRLIKEIKEEKGKE
VYYVIVSEAGASVYSASELATEEYPDIDVSIRGAISIGRRLQDPLAELVK
IDPKSIGVGQYQHDITPKKLDESLRGVVEDCVNNVGVDLNTATPSLLAYV
SGINSGIAKNIVAYREEKGKFTSRKELLKVKRLGAKAFEQCAGFLRVSES
KELLDNTGVHPESYKVTKELIKTLNYSANDLKCNKLEDIDGRIKNSDIDE
LAKNLDIGKPTLLDIIKELKKPGRDPREDLPKPIFKTGVIDINQLKPGMA
LTGTVRNVADFGAFVDIGVHQDGLVHISELSDKFVKHPLDVVKVGDIVDV
RVLEVDEKRGRISLSMKQ
>gid:173518  CTC00377  putative central glycolytic genes regulator
MNLEDLLKLQQKIIPEGIELLERRYIILRNIYYSQPVGRRLLSRNLNLSE
RIIRTEVNFLKEQGFIEINTPGMVITKLGEELISKLKEFVYMIKGLSTLE
FRIKERLGLKKVIIVPGNIEEDSSVLKELGKAASNCFKDLLKNGDVVALT
GGSTIKSFVDNIARCNNYEDITIVPARGGMGKKLETQSNTLVSNLAIKCN
WNYRLLHVPDNLGIEAAKIIMKEKDVIEVMNIIEDADILIYGVGRADEMA
KRRGMSEQNIAKLLEKGALGEAFGHYFNKNGEIVYSTSTMGIKNEKVENI
KNIIAIGGGASKAEAIIATQLNKPNGILITDEGASKSILNIL
>gid:173525  CTC00384  exoribonuclease II
MKIQETLIEFMKEQAYKPMNLKELAKVFNIKGDEIEDFKKVLDYMEKDGL
VVKTRTEYYGVPERMGLIVGKIQGHQRGYAFLIPEDDIQDVFIPASGLNG
AMNGDKVVVKTFKEVREGKKSEGEVIRILNRANKTIIGTFEDSKNFGFVV
PDEKRIYQDIYIPKGNVAGAHSGDIVIAEITKWPEKRRSPEGKIVEILGK
KGEKGIDILTIIKKYNLPEEFPQKVQSYLDGVPNEINEEEYKNRLDLRDI
KIITIDGEDAKDLDDAISIEKLPNGNFYLGVHIADVSHYVKEKNPLDKEA
LKRGTSVYLVDRVIPMLPKELSNGICSLNPKVDRLTLSCFMEIDKTGKVI
AHKVAESVINSSERMTYTDVNKILKDNDQELIKKYDYLMENFKSMEELCK
VLYKKRINRGAIDFDFEECKIILDEDGKPVDIKPYEREIANRMIEEFMLV
CNETIAEYMFWSNIPFVYRIHEEPDLEKLQHFNEFVYNLGYTIKYSKEVH
PKSLQQVVEKVRGKKEEVVINTLLLRSLKQAKYSPECIGHFGLAARYYCH
FTSPIRRYPDLIIHRIIKEYIKNGISEKRVKKLEGEVSSASIQSSEMERL
AEEAEREVDDLKKAEYMSERIGEVYNGIISSVTAFGLFVELPNTVEGLIH
ISTLLDDYYVYDERGLRLVGEKTKKMYRLGDEVKIKVEKVDLDSYEIYFE
LLESEDKK
>gid:173532  CTC00392  two-component response regulator
MINLYSIMIIEDDKKMAKLIKNHLERYGYKTFLIKDFSNIKDEFLEHKPD
LVLMDINLPFFDGFYWCSHIRSHSKVPIIFISSRDSDMDQVMAIDNGGDD
FITKPFSYDVLLAKIKGVLRRVYGSYAKGDTDFLKIDDLILYTNKNVLEY
KGKKTELSKNEFSLLLHLLKNINKIVSRDTLLGILWSDIDFIDDNTLSVN
VTRLRKRLEEIGITNAIETKRGQGYILINNW
>gid:173538  CTC00399  transcriptional regulatory protein
MNLEYLQSFYIAVKYNSISKAAQFLHLTQPGLSGQLKSLENELGVSLLTR
SNKGVELTEEGKVVFNYADTLLSIQGNIKRDLVNLHKDKPKLLIGSCKSV
GEYALPCSIFTFKDHHDEIDIHMEVANSTEVIEKLQDHTINIGIIQYDPK
VDDIITEFIVSDELFLVGNIENSPKKISLEELKDIPLILRENSSGTRHIV
KDALKEKGISVEDLNVIYDLNSPESIKSSILAGKGFSFLPKLAIEQEIKN
QRIKAVSIDNLNISFDYYVAYRKNYDFTEYEQMFVDFILSNKRGFC
>gid:173562  CTC00424  transcriptional regulator
MEVYMDIENSLITNHLRVCGRTFKGLEEELNKIGLYRGQPALLFILSKSD
GLTQKELCSRLHIAPATITKMVKRLESSDFVERKSDEKDLRVNRIYLTSK
AYEVMDTIKIVYKDFEESCFEGLSKEEREIFDNILAKINNNLKRKEMR
>gid:173590  CTC00452  iron-dependent transcriptional repressor
MKGDFMNKNKNFYTVRGYEILKKDKNLLTNSMEDYLEMIYRNSLISGYTR
IKELSESLNIRPSSATKMVQKLSELGFVNYEKYGIVELTKKGEDIGGFLL
KRHSIIESFLKNIGVEKDILVNIELIEHSVTEEALEKIDLFNKFLEENRN
VKERFENFIK
>gid:173613  CTC00480  conserved protein
MIVFILTSTYFFVSWLLQCNHFKLYHNLWRGLLVKKVTKDVYVCGVELTT
DILGGKWRIMILWYLRKKSLRFGQLKRSLKGISEKVLSQELKQLTELGLI
DKKVYYQKPLKVEYSLTNYGRTFLPTLYSIFEWGAHYAEIFNIPLIIDEA
TIDEVLNEKERFLLKYKNNKLESVN
>gid:173616  CTC00483  transcriptional regulator
MEDKKIFELLKDITNLSKLMNRKLNAKMDGKKISPYPMIILNQLDSKKPT
TLTDIREKLGIPNSTISTVLDKLLEKGLIRKEKDETDKRRTFLYLTEKAY
EEERKIIKQHVEVFKEVLSKATDEDLNTLINSTKLFIKLIEKDNKEDEYK
L
>gid:173657  CTC00532  conserved protein
MNISSVVVALTSEDILNMIKENLNIEYLSIDKIEINNFIKIEGTYKKILK
IPFYAKIGFGNIQENKLSVKIFSIKVLKLGIIKPIKSIALDKALKKFKDY
GVNTDKDNIFINLNEVTKLIPNFYLNLKNINLEENIVKVEIEDIKYDKRK
PKVDLNKEKEEVIPLEDSYTEVREGIINNTPDKYRKIIEYSMVVPDIVSL
LWRIFKDKRVSITTKGKAAAVLAYLAMPFDILPDFIPFIGKIDDVVIAFY
GLNSLINEVPEEIIKENWQGDKDIIVLVKEVVKYISQTVGIQNVKLIVDS
VSGIINNSLKRENKSNNRKYVKRSKNNKKV
>gid:173683  CTC00553  RNA polymerase sigma factor
MKRNCNVFRFIYRGGGKYPFGYLCNMHDKVEQLIDDYGNDVLRVAYMYLK
DKSMAEDAFQEVFIKVYKNIDKLEYIEKEKSWLMTITVNTCKDILKSAWM
RKMSFIGEREEEISATEENMEMKIINKIEGENILEKVMSLPEQYKDVILL
YYYEEFSTVEIGDILKIAEGTVRSRLYRGRQILKNILEDGKSGYGG
>gid:173685  CTC00556  signal-transduction and transcriptional-control protein
MLNDIKTELQNIADTIKAITNVDVTIMDRNLKRIAATGILRNNIGKFVPQ
NSAFHKSLTTGEQYFITNPPNHHLCLDCYNKESCEEKAELCIPIKDENNI
IGVLGMCIFDEETKNNFINKHEGYKNFESRLSSLISTRINEKKLGILVEY
RSSELMTLINSLNEGIIILNNNKQILSMNNYIKEKANLYGIKEHTNIKEI
LPNKILDRLLSKNFHGEIGIFEINQFKFILNSSPIIVKGRKKGVVLVFSD
FHKMQESILKANKSSNIITFDDIIGESETLLNAKRQAIQIAEEDISVLIL
GESGTGKEVFARAIHFASNRKNEAFMPINSGAIPENLIESELFGYEKGAF
TGANTSGKMGKFELAKDGTVFLDEIGDLPIHMQVKLLRVLEEREIIRVGG
NETIKVNPRIISATHKNLYKMVTEDKFREDLFYRLNVVPITIPPLRERNY
DIIILARYFLKKYNKVYGKNLLGFTKECEKSLLNYSFPGNIRELRNLIEY
SINFEKGDYITTDTLNQKLNPSNDTGKDLTLAEMTRIYEKKVLENYIKKY
GDNVDAKKSIAKKLGISIATFYRKLE
>gid:173702  CTC00575  conserved protein (RRF2 family protein)
MMRMNITQEADYGIRAVLILAKEGEGEKLDAKTIAERGNIPLRFLLKLLR
KLIQAGIVRSYRGVNGGYALNKHSEDINLKEVIESIDGPIAVNRCITDKD
FCNAKKTEICVVHKELRKVQNIFVKELEKITFSKLKNS
>gid:173979  CTC00872  two-component response regulator
MKESILIIEDEEKVSSVLKAYLGKEGYKVISTTSGIEGIEIFKKGNFKLI
ILDLMLPDIEGEEVCKIIRGISDVYIFMLTAKGDLSNRIEGLNIGGDEYL
VKPFSPRELTARVNALFRRIGGEDEEILSFNNGELKINKIKRIVEIEKRD
VKLTPNEFQILYALASNKGKVFTREMLINSALGLDFQGFDRTVDVHVKNI
RKKIEKDSRNPKYVLTVTRVGYKFGGES
>gid:174007  CTC00904  ribose operon repressor
MGYMEGIMSKITIKEVAKRANVSTATVSRVLNNNYPVSDEARKEVLKAAS
ELNYKPNGVARSLKKNKTNLIGIIVADISNPFFMSVARGVESVVSEEYNL
ILSSTDESPDKEVKLLNMMLEKKVDGIVIASSNIDSSAIKSIIASGIKLV
LIDRKVDDVTLDYIANDNFNGSFLLTESLIKKGHKDIAIVNGCLNVTTAI
ERFNGYRAAMNKYGLKIDKDFILQGNYSASIAFVETRNLIRKGKLPTALL
SANNSMTEGIMKALKSEKVRIPEDISLVSFGEITNQEFIEPKITCIKQNP
FLMGQKAGEVILDKLNGKSKEDNFKEVVLINEFCEGNSIKSLI
>gid:174016  CTC00913  transcriptional regulatory protein
MVSGGRFLDIKKDTVNSYCKYIEKEFDCKTSEEILGKKYIIAKQFGIGNL
SRMKIEDGIEISIFHMYKADTHFDNRMYKDDILEISYCYSGIGEIRTLPQ
NKKYIFKKGQICIYKSLNDVDYFKFKYDNCKTMSIHMDFSIIKNVINPIW
EDKMITDWENHINEIFKDDTLIIERATDKIRKIAEQIENIPIKNMLDYIN
LKLKTIELLSTFFKDKFNKKNLNKQETEIIVNAKEIINKNLQRVPSVKEL
ACNLNISIYKLQEEFKNVIGCTVYEYIKKVRMEKAKYLLKSTNMSVLEIA
NEIGYENPSKFANAFKEYNNVTPLKYRKLNITKY
>gid:174025  CTC00922  putative transcriptional regulator
MEISERLQQLRKLANYSQEQLADMLGVSRQAISKWESGQSNPDISNVIKL
SGIYNVSTDYILIGKEPNSELTENKMETKCKVEKKTYIPISKKALSIIAI
IGSTAVITIIFIAALTAIAFFIKRRK
>gid:174046  CTC00943  transcriptional regulatory protein
MSKCNIRRGGMSNCNNRELIKVAYYYYKKGLIQAEIAEKMGMSRQKVNRL
LKKALKENIVQIQIIDIDKYNLELETKLEEKFKLKQTVVISAIDKKNITG
SLGIAGAEYLEELLVKDDVIGVTWGKTLSEIANRLSYNNKLQTSVVQLIG
GMDIAFTALKPDEITRTIAEKLGGKPYLLYAPAIVENKETKSAIMSDESL
KTTFKNMEKCNVIIAGIGELNADSTLYKQKYFNEKYIEHLLSCQCVGDIG
FRWYNEEGKIVEHDYKDKTIGYDILENKSNALVIGIAGGVSKYEAILGAL
KGNYLDVLITDSDTAKRLIEE
>gid:174071  CTC00971  transcriptional regulator, putative pyruvate dehydrogenase complex repressor
MFSPVKNKKIYEEVIEQIKDMIYKGILKKGDKLPSERDMVEKLQVSRTSV
REALRSLEIVGLIESRQGEGNFIKEDFEDGLIEPLSVMFMLQDSKSEEIL
ELRKIIEVGTIKLAAERITESELEKLNELKEKLKTPNKEENLAEIDREFH
YKIAAASKNFLLLGVLNAISALMESYIKDARKSILEEEGNRQELITQHEN
IFEALNNNSEDEAVEAMTKHLDFANKYMINR
>gid:174143  CTC01049  RRF2 protein family
MKLSTKGRYGVRAMIDLALNYGDIPISIKSISERQNISEYYLEQLFATLR
KADLIKSIRGAQGGYLLSREPKDISIAEIIETLEGPVELSNCVSQGECEN
MDSCSTRLLWVRIKESIDNVTKTTTLQDMVDDYYKLNSCKGKGK
>gid:174160  CTC01066  RNA polymerase sigma factor
MILKENLYKIRTKISLSEYYNNKHYLEGLKVYMFDSIINILGSNILLTAY
VTGNNSFPKPLKAEEEKYYLKQLEKGDISAKGVLIERNLRLVAHIVKKYS
FPGKDMDDLISIGTIGLIKAIDSFKIDRGTRLATYAAKCIENEILMLIRN
NKKTKGEVYLQDPIGIDKEGNEIPWTSYQSRA
>gid:174164  CTC01070  DNA-binding protein
MSIMGLEIIEKLKKEKGFTSKQLSEKSGVPKGTLDKILNGTTKDPKLETL
KSLSRVLGCTLDDFDDKTETEMENINFKKETTLLTNFNKLNDTGKSEAIK
RVEELAQIDKYTHEEKDHLMPIAAHDKEGNFSKEDMEHDLNLMKDDELWK
>gid:174175  CTC01082  hypothetical protein
MEKVKLWTQEEDKYILENQGKMTYREMAKKIGRTESAVKNRISYERMKSH
MNKDKAKKWLEEQLPGMTPQQGKKQIMKKLNIDEKKAEKVYNKWRKNYIK
AMM
>gid:174190  CTC01097  conserved protein
MMSIQVTSIEDLKKMAEYDLIELPRFKAEIPFVAKVKRASLLNLVRKGVI
PNKLLSAAEELFYGKSSNKGNVDMKALTDVMFIMAENALIEPSARDLKEV
ELELTDEQIVALFNYTQEGLNEIEKFPEKPENTVGDNNEQTVSNKTKPDN
SINK
>gid:174213  CTC01126  RNA polymerase sigma-E factor
MEKTINNCSLFIISDKWLLTIYWRDIMFKLKVFLNKILSKLKIFARNIYY
IGGSDVLPPPLTREEEENLVEKLNYGDESIRSILIERNLRLVVYIARKFE
NTGIGIEDLVSVGTIGLIKAVNTFDPSKKIKLATYASRCIENEILMYLRR
NNKIKSEISFYEPLNVDWDGNELLLSDILGTDTDIVYDYIEEEVDKELLL
IAMDKLNNREKQIVNLRFGLGGKTEKTQKEVADMLGISQSYISRLEKRII
KRLKKEINKMI
>gid:174214  CTC01128  RNA polymerase sigma-G factor
MIIGEIRRYLRDNNSIRVSRSLRDIAYKALQVRDKLIAKNDKEPTVSEIA
KELDIPREDVVFALDAIQDPLSLFEPIYQDGGDSIYVMDQISDTKNLDDS
WIENIAIKEAMRNLNKREKLILSLRFFDGRTQMEVADEIGISQAQVSRLE
KTALKHMRKFV
>gid:174215  CTC01129  4-hydroxybenzoate octaprenyltransferase
MGKHSMKCPYCSYNESKVVDSRSTEDSISIRRRRECLECGKRYTTYEKIE
SVPILVIKKNLNREYFDRDKIVNGMIKACQKRPVSRQQIEEIVDEIEKKI
NNSMITEVKSEYIGELIMEKLKDIDEVSYVRFASVYRQFKDINTFMEEIK
KLKDREL
>gid:174216  CTC01130  transcriptional regulatory protein
MSQDKILIVDDEEHIRELLRYNLEKEGYKIFCAENGKEALEIAKEKKPTL
ILLDVMLPQMDGYDVCKEIRKDNSISTTPIIMITAKGEELDKVLGLELGA
DDYITKPFSIRELIARIKAVLRRTLLKSTEEPFKFEGLKMDFEKHEVMKD
GEKVDLTLKEFQLLEILIKNKGRVLTREYLLDKIWGYEYIGETRTVDVHI
RHLRQKVEDDDKNPKYIETIRGVGYRFNLNIN
>gid:174262  CTC01177  transcriptional regulatory protein
MNLEYLQSFYVTVKSNSISKAAENLHLTQPGLSMQLKNLEKELGVTLLNR
SNKGVEMTEEGKVVFDYAHTILDIKGNIERDLKSLHEDVPTLIIGSCKSV
GEYALPCSIYTFKKFHKEINIHMQIDNSNEVIKKLCDHTINIGIVQRHPE
NSNIDTKTIISDELVLVASPYNDKSKISLEELKDLPLILREEGSGTRDLV
LKSLHNKNINLKDLNVIYNLNSPEAIKSSVSSDKGFSFLPKLIIKKDLKE
SYLQKIELDELKIDFNYYIVCRKNYRLTSYEQTFVDFIISNKRGFC
>gid:174272  CTC01188  acetyltransferase
MIRHAVHDDLDNIMKIISETIEFMALDNNTQWDKNYPSRQNFQCDIDAHS
LYVMEENKNLCGFICINDVEPNEYGDVMWSDSGECLVVHRMAVSVAYRHQ
GVGTKLLSYIKTLAKDKKIHLIKSDTYSLNPKMNALFQKCGYEKVGEINL
LNKPYKFNCYEKLLY
>gid:174293  CTC01212  transcriptional regulatory protein
MVKTIRSKTRMIDFKLITFLTVVKVGSFTRAANVLNLTQPAISQHIKYIE
NYYGVELFKNKNKNMELTEEGKVLYKYGRQVENISNIVHMKLKNSINKRY
VVGATLTIGGYVIPSIIGKYKKEHNDIDVILKVENTDTVIKMLYKGEIEL
GVIEGGFSKEKIEYTKFKEDELVLVVSPNHKFADKNFVNIEEILQDKLIL
REDGSGTRQIFEEHLIEMGIRKDDYNIYMEIGNISAIVSLVKSNLGCTII
SREAVKENIEEGSLKEVQIENFNMRREFNFIYLKDGNERFIKSFTMFCKE
NDI
>gid:174323  CTC01243  ribonuclease III
MNKYMDLKDLQNKIEIKFENIKLLHIALTHSSYANEKKRIQYNERLEFLG
DSVLQLVITEYLFMNYKDKSEGELSKKRALIVCENSLFSIAKNLELGEYI
KMSKGEELTGGRERISILADAVEALIASIYLDKGIDVVREFILKNFYNIV
EKAMKDEIILDYKTKLQEIIQKDGDIQINYILIKHEGPPHRRKFYTEVKI
KDNVLGYGIGYSKKESEQNAAKKAIENMEVNKEYE
>gid:174324  CTC01244  oxygen-independent coproporphyrinogen III oxidase
MSKKHYIIPIFVPHEGCVHNCVFCNQNSITGISEVIDDKYTKDTIETYLQ
TINKTQETIIEVSFFGGSFTAIDINKQKRLLKVAKEYKEKGLIDFIRLST
RPDYIDDAILTNLKDYKVDIIELGVQSLDEEVLKKSARGHSEKDVKEASK
LIHEYGFTLGHQVMLGLPGDSFEKDIKTALKVIEMKPKICRIYPALVIKN
TPMEKMYKEGVYQPYTLEEAVEISKELYNIFTENNIEVIRIGLQPTEEIN
EGGELVAGPFHPAFRELVEGKLINERILDYLQDKNYEKVEIEINPKTISK
LYSNKKEFFYDTLNKLKLNNIKVIQNSSLGEKLIGIKYDEIYNILAIHKK
I
>gid:174352  CTC01273  N utilization substance protein A
MNEEFIVALKEIVKEKGISAELLFNTIEDALVAAYKKNYSKQGATSQHVN
VSMNRETGEIHVYSRKNVVEEVEDEFNEIFVEDAKTIDPRYELEDIVDIE
VTPEKFGRVAAQAAKQVVVQRIKEEERRIVYNEFIEKECDIITGNVIRKD
KTNVFINLGKIEAVLGPNEQMPGEEYNFNDKLKLYIVEVKNTTKGAQVVV
SRTHPGLVKRLFELEVPEIYNGIVEIKSISREAGSRTKIAVHSNDENVDS
MGACVGPKGTRVQNIVNELKNEKIDIIKWSKLPDEFISNALSPARVLKVD
VDEESKSAKVLVEDNQLSLAIGKEGQNVRLAAKLTGWKIDIKSLSQISEV
EEDIEVVESEN
>gid:174420  CTC01344  RRF2 family protein
MTLMQISTKGRYGLKAMVNIGVYSSLESVTKKSISEMEDISEKYLEQILS
VLKKNGLINSKKGPQGGYTLARNDNEITVGDILRTLEGELEVVNLEEYND
SNIMELCLKRNVWNKLNKEINTLVDSITLEELVQEYKGYKNPGYMYYI
>gid:174440  CTC01368  mitochondrial ATP-dependent RNA helicase suv3 precursor
MFLYRRSIMKKRTMERNFRKIKHQIDQMENIVKHTKNNALWDHEAAVRKK
LKALGEYKNENFRDFNRVYERYLDLLEDISIRIINNYNKNNNTDFKFHEV
VKDNYEAYLKSGIMTVLITSHIPKMIYKKFDTVFPKNPKDEYEEARKLTR
KFYIHLGETNTGKTYNAMQKLKESKHGIYLSPLRILALENFERLNNEGIK
CNLLTGEEEIKVENATHTSCTIEKLDINKVYDVAIIDEIQMIDDDERGAA
WTRAFLGLNCEEIHICGAINSKDIITEIVEDCQDEYEFKEYKRDIPLEME
FESFSYRDIKEGDALVVFSKKRVLQLAKNYADMGIKSSLIYGDLPPEVRK
KQYKQFINKESSILITTDAIGMGVNLPIRRIIFMDVKKFDGSEIRYLNSQ
EVKQIAGRAGRKGIYEIGYVSSYGNTQNFIKEMIDIEDRTIDKAVVGPTE
AILKIKGLPLREKLAIWSTQKEKIPHYRKMDISEYLIVLDSIKFYKLDES
IQWQLLKIPFDVGNSDLMRAFLNYMDEIFIAKRKGLSKPKYPFKTLYELE
TYYQKINLYYSSSKALKLPFDEEWVYEERLKVSEDINNILIRI
>gid:174462  CTC01391  transcriptional regulatory protein
MDKFIFYRKVFFMNVFNIMDKPKELKYVTVYNQLFKMINEGIFVKGSRLP
SEPELSKMIGVSRTTLRQALALLQEDGLVKNIHGKGNFIIKSKNEKIIGL
EKIGHPVYKCIDQKIDVVEISIRIEPSTDYIDQTFGRKTTAVALIDRWYK
FKDKAIAYTFTLIPIDTVSNLDIDLNDQDKVLKILEEDIYEICDDILLEL
KYSTSGNFAAKKYQLSHEDQFYLIQETLYKGNKFPIISNKHYLPIESSSI
KFHPLK
>gid:174481  CTC01411  transcriptional regulatory protein
MNLCRDKQYEIKSLKSNNSCICDGFNKTYNGIYDEYNYQIPREFGNGHLK
QLFSSQNARIMEFDINLLKEIEINGTSKTPHIDMLFCLGDDIQWELPQTG
KKFEMLSGEGYMGTSEETIKRCVYPAKCDIKLIEIKMPLKKMKDTIYKIC
EDYGCHSDFSKKVWCDNLKITPSVNVILHQMLKCPYEESLKCLYMEGKLM
ELVAVYLNEIMNQTKRGSNNINLSKDDIKSIYKARDILDKSINQKVTLSY
LSKEVCLNEFKLKKGFKELFGVPVYTYLLDKRLELARLYLEKKELRVSEV
ASLVGYGNMSHFATAFRKKYGVNPSEFIK
>gid:174491  CTC01421  transcriptional regulatory component of sensory transduction system
MNNILLVEDDSILAYSIEYTLNGEGFNLKCADSIKKARDNFKENSFDLII
LDVMLPDGNGYDFCKEIRKASEVPVIFLTACDEEANVVIGLDIGADDYIT
KPFRIKELISRIRAILRRSKTFSKDLDLLISGDIKVQTLQGKIEKNDKEI
ILTALEYRLLLIFINHPKQILSRNIILEELWDAEGEFVDDNTLSVYIRRL
REKIEDNAGEPKYITTHRGLGYRWNYEINK
>gid:174502  CTC01432  transcriptional regulatory protein
MNYRKDIEKCIKFIEDHIKENITIKEIANESGYSLYHFCRVFSLCKGMSL
MEYIRDRRLSLAATELLKGRKVIDIALDYGFETPSGFTKAFRKIFGYSPT
QYMARMAGYADTKKAFKIGGYIMNPVIINRPAFKVAGYGIKTNITDGTYT
KDIASFWSNYNGENLESKMYKILNPPKHGEVGLCVPLSEDGNAIYLLGVI
VDDFSKVEENMLTVEVPAAEYAVFTTTPVDTTNDKEQKEFAKIIKGTWKY
IFEDWFKDSGYVYDENKLDFEFYDERCHYRQDTVMEIYVPVKKVK
>gid:174503  CTC01433  putative RNA polymerase sigma factor
MILNRNKNKDKSKRFNQLISMIWPDVVKYIFSITRNETLTEDVLQNTLII
AYKNFSKLKDIDKFKSWVFTIARRESITLIKKYKREVTIKNNIIQIMPDE
NFSLPEQCILKEELINYVIKAINTLRSEYRQVITLRYYNNLSFYEIATIL
NIKESTVRVWHMRAKKEIYNWINYNYFQINTNKMHT
>gid:174509  CTC01439  putative transcriptional regulatory protein
MQNKIFLFILVFLVSFKQLLYNSLRTLNIFNVNFILLSLVIIVNTIIGGY
TIMNINSIIAENLKTLRTERNLSLGQLAELSGISKVMLSQIEKGDTNPTI
NTLWKIAKGLKVPYTSLLEQKKHDTYVIKKRNIEAQFTEEGHYRVYCYYT
STPYRNFELFQIEIDEGCSYKSIGHSKKCQEYIMVLEGELTLEINNKIYK
LTSDDSISFSASSQHIYINSGNGTLKATITNFYPA
>gid:174522  CTC01452  transcriptional regulatory protein
MVLNVKEELYSIGKVGEICKITKKALRYYDKMDILSPDKVSDESGYRYYS
KKTLLSVPMIKYYKQSGFKLEEMKVFLEGETYDFFHKSFRNKIDELKELE
KEINLKIRSVKDWDDLIVEAQNVIENNVCDVAIKYIDNKTLTFLDQEFKY
DYMDSIINIEFTNYIDSIENAITGPVIIRFPCHEDKMNGKCTKMRIMQET
ILKCKEELSVEFGGWMAAACYHIGPHETISDTYKKIKEWTKEHGYICFEE
CYERYVTDYWTTKNTDKFVTEILIKISRER
>gid:174551  CTC01482  transcriptional activator protein
MKLLIVEDEKQLLESIAEGLRLSGYVVDIAENGKEAEEMCFVEDYDLVIL
DINLPLMDGFSVLKSIREHNKTVNIIMLTAKSDVEDRVLGLDLGANDYMI
KPFHFEELEARIRSLLRRKTVQQDAVIVCGPIKFDTNSRTVQIHDENFKL
TKKETTILEYLILNKSRIVSQEEILDHVWGDSVDFLSNTVRVHMSTLRRK
LKDKAGCNIIKNVIGEGYIIDE
>gid:174559  CTC01490  transcriptional regulatory protein
MKKILIVEDDLSIAELQKDYLEISDFEVKICTDGVSGLNEIKENKYDLII
LDVMLPKMDGFDILRIIHDTKDVPVLMVSAKKEEIDKIKGLSLGADDYIT
KPFSPGELVARVKSHIQNYERLKNKFSDKLNNNVISIRGLEINKDSRQVI
INDKEVNLAQKEFDLLLHMAQYPNRVFGKDELFESIWGLDSIGDSATVTV
HIRRIREKIEFNPSKPQYIETVWGVGYRIRV
>gid:174567  CTC01499  ATP-dependent RNA helicase
MEKLSFKSFGISEDILEALLKLGYKNPSKVQQKVIPVAIKNKDIIVKSKT
GSGKTASFGIPICENVNLEERKPQALVLTPTRELCIQVKEDIKNIGRFKR
IKCSAIFGKQPFKTQALELKQRTHVVVGTPGRTLDHIERGTIDLDKIKYF
IVDEGDEMFNMGFIDQVESIMRKLPKKRVNMLFSATIPEKIEKLCEKYMK
SPIMIEVNPEEFTEEKIQHIYYEIEDKNKFDLLNKILITENPDSSIIFCR
TQENVNKLAKLMENKDYPCKALHGGMMQDKRIDIMNRFKRGEFMFLVATD
LAARGIDVENVTHIINYDIPMEKENYVHRTGRTGRAGREGCAISLVTPYE
DRFFKQIEEYIGFKIKLGDEITKESVENGEKAFIEKIKAMPKIKKQKADK
LDKDITKIYLSAGKKKKIRPGDIVGGITNISGVTPEDIGIIDIQDVCSYV
DILNGKGKLVLEGLKSTTIKGKKLRAEKATK
>gid:174586  CTC01523  transcriptional regulatory protein
MIKVMIIEDDPMVMEINYRFLNKIEGFKVCKKASNLKEAYDYILKHKLDL
ILLDIYLPRENGLEFLKKLRKDEIGLDAIIITADRSKDSLKEALMYGAVD
YIIKPFTFNRFEETFKNYRGKYIKLENLDQLEQNTVDKLISNTRCGDCNK
KNTLEPREYTHLIKGLNKFTYEKIWEHIHKRQNYFTAEEIAKEIGMARIT
IRKYLEYMCIENKLGFKLEYGKVGRPRHEYKVK
>gid:174591  CTC01528  conserved protein
MKQMNYIINEENELRFFSIIESLLFASGEPLGLKDISEIIELNTLDTKEI
LQKMIREYEIEKRGIKLIEIEKKYQLVTKEENSCFIEQLLKTNSSQSLSQ
AALETLSIVAYKQPVTRVDVDEIRGVKSDRALQTLLQKSLIKETGRLDVP
GRPILYSTTEEFLKHFGLESIKELPSLEELLEEFQEEDL
>gid:174621  CTC01560  phage-related protein
MKNNLLTKMTEFEGQKVEIIIEENVLFELYSTGMALGYIKKNNIGKIYPQ
KDRIDKIIKNAEITPCVHGVHTYLTEDMLYDFMLESRTEKCKKFRKWVTN
EVLPQIRQNGMYISDNATIEQKEYNYNMLDITFKNCSIEQLEDKYKECME
FHKENKTRILYKANTKKRKDATHTHSDSKIKIMEKIIKTLEDRNKTLIGN
NKFGLVSEIDDVIKMIKDDIKLQNNLSNRGKLGGKTRKINELTNELEKVC
PRRS
>gid:174626  CTC01566  phage-related protein
MAKKRFWEHTKTYIKDIFLRKILQANLSPQATKLLLILMGHKNSNTGLCN
PSQALLSKEMNRSVRSIQRYLQELVQAGIIAIERIGKMITNKYFLLVDKE
LEEFKEQYADAKETTNNIKNKCKSYANNYKDSKKKDSWNYEGQRDASYYT
DLAKRLLGHV
>gid:174631  CTC01572  arginine repressor
MKVTRHEKILELIERKDIETQEELAEELRKSGIEITQATVSRDIKELKLI
KVLGEQGKYKYAAIVKNENDLSDKLANIFSHSVVSVENINNFVVVKTLSG
SGNAAAEAIDSLNFKEIAGTIAGDNTIFIMARTSEQAFEIVKKMKRVIRE
RGV
>gid:174639  CTC01581  N utilization substance protein B
MKRKKSREMTMQLLFEMMIKKENYVEIINTLKEALTEEEDINSILGEKKE
MDEERIDLDEVDLEYLIHTLKGVEENSKVLDEHIEKYLKNWTLNRLAKVD
LAILRLCSYEILFSNEVPDNVAINEGVELAKKYGDDKSPAFINAVLDKIA
KQM
>gid:174662  CTC01606  fibronectin/fibrinogen-binding protein
MILLALDGLFLYATLEELKDSILNSKIYKINQPEKDEIVFSLKKDKNSYK
LLISASTMYPRIHCTDINKKNPMTPPMFCMILRKYLSNSKITSIYQLQLD
RVVFIDLQGKDELGFEKTYTLIIEIMGRHSNISLVEKSSSIILDSIKHIT
PEINSVRTLLPGLKFVLPPKSNKLNPLDYTYDDLEKFILENNIKLNNTFV
SKVFMGVGNQLSKEIINSLNSELSLENLKDIHKEIELFFNKVTQDNFSFF
ITLENDIFQDFFPIDLSSLEQKDKLHFSSPSKTLEYYYSEKDKRDRLNNK
SHSLLKLVNNNLDRCHKKMEILNDNLKKCEKADKYRIYGELLTANIYSIK
QGDESIDVVNYYSEDSQVINIKLDPTKTPSTNIQNYFKRYSKLKKSKEYS
LEQIKITEDEIIYLNSVLTNIKNTENYAGIEEIKKELMDARYLKFKKNIR
KKETKSKPIHFISSEGIHIYVGKNNIENDYLTLKFADKRDLWFHTKNIPG
SHVILKTLGKFTEKTIEEAANLAAFYSKGRDSSKVPVDYTEVRNVHKPNG
AKPGMVIYETNKTIFIDPEKPSLEKLS
>gid:174695  CTC01641  putative transcriptional regulatory protein
MENMGKGKDFFTIGEFAKKAGVTLRTLRYYDKIDLLKPTAYNELGHRLYT
KEDFGNLQKILTLKFIGLSLEEIGDIMKYDLISNGFKKSLEIQKEIIEEK
AKQMKNIVKAIDETLNMVEEEEKVNWDKFINIISLINEDKKWIEQYKNSS
NLRARINLHQRFSTNTEGWMPWFFKNLPLNEECKVLELGCGDGSLWRINY
NYIPKSWDIYLTDFSKGMLEDAKKNLVKQKERFKFQIVDVEKIPYEDESF
DLVIANHMLYHVENIDRAMSEIKRVLKKDGVFYASTVGKEHMKEMREIIS
KVDKNILQVESFNLTEKFQLENGKKILNNWFPYVDIKKYEDSLTIKEEDA
LLDYIFSMPGNIREKFDGERLKKIQTILKKEKVQKGYIYITKDTGFFKSK
KYRGV
>gid:174742  CTC01695  hypothetical protein
MNMYIVVHIEQSEFFSNIIKVMLEEQGYEYINTDNFSEACYIIENNDVDL
IITSLLAKGGSIEEFIKDINSSDKKEIPIFVVTGDNINEKKKSLFNLGIS
DYILKEDLQEEISKHVQAVLEEDGYMRDLREAKIAIVEDSSLEYAIVRDI
LKNYGIENLELYKTGKELIDSNKTYDIYLIDLVLQNEYGKNIIRQIRRNN
IKATIIAITSLSNSKTLSSILGAGADDFILKPVDKGLFIAKLKSNIRIYS
LNKKINTYLREIEIIEK
>gid:174802  CTC01759  glycerol uptake operon antiterminator regulatory protein
MENIEKMLIENPIIAAIRNDDDLEAAIVSEAEIIFVLYGNIINIGYICNK
IKEKNKIVFVHIDLIEGLKGDSQGLEYIKKYGNPAGIITTKISCIKHGKH
LGFYTIQRVFVVDSLFLKTGVKSIHEISPHAIEVMPGIAMKAIGETEDLD
KKLKTPIIAGGLIRSKKDVMDCLSSGAIAVSTSTTDLWNL
>gid:174825  CTC01786  RNA polymerase sigma factor
MKIDEESFIKKLKEKNTKALEFALDNYGNLAYKVVYSVLGAGFERHSIEE
CVNDVFMVVWNNIDSFREDKGSFKSWLIAISKYKAIDYRRKLARENNLEY
LDEIITNEGNSTENIIIIEENRQEILSAINELKDIDKIIFTKRYLLEEDI
EIIAKELGVNRTVIDNRLSRGRRSLKKKLTFLKEEIV
>gid:174827  CTC01788  RNA polymerase sigma factor
MKKLLNLYSNRNKSLNAIQRRARNVNINEQNFIKEIRKRNTRALDYIVDN
YSNLVFKIVGSVLNSSFYFQHVEECANDVFWSVWNNIESFDEDKGEFKHW
IAAISKYKAIDYKRKLFKESIVEDIDDYYNLCDEISTENTVLSKENRKEV
LNAINNMKDEDREIFIRRYFLYEGVENIAKIFGVNRNSIDKRLSRGRKVL
KKDLMHLKGEIL
>gid:174829  CTC01790  RNA polymerase sigma factor
MNTEILVKKSKKGDISAFMELLREKQELFYKIAFTYTKNSYDAEDCISES
AIKGYEKIKQLKKWEKFYSWFTSILVNICRKQYREKLNFSSKETLKDIKD
SFSYNSVEDKIIIEELLEKLKKDEREILVLRYLKDYPIKDVAFIMDIPVN
TVKTKIYRSLKFLKSKTEEVKNEYR
>gid:174841  CTC01805  two-component response regulator
MGVTYMEGLSNANVLIVEDDKEINNLISKALIKEGFSVVQAFEGIEGYSK
YRKIDFSIIILDIMLPYLNGIEIMKKIREESVVPIILISAKDEEYDRIIG
LELGADDYIVKPFFVGELVARIKSQLRRYIDFHKNDEVISRIQKGDIILD
LNNYCIYKNGEKIDLTAKEFGLLKLFFTNPNRVFTKMQIFENVWHEEYRG
DDNTIMVNIRRLRNKIEDDPNNPEYILTVWGIGYKLGDIK
>gid:174853  CTC01817  RNA polymerase sigma factor
MHIDRNNFLDEIRKGNTKALDYIMETYSPLVKGIVTKVLYTLGNNGLVEE
CIADVFISVWKNNVSFTGDGLSFKKWIACISKYKAIDYYRKNKNNLEMYD
IDECIEKSSYDLEEEIIDLENEDKLLKLINKLEETNRSIFIMKFFLGMSS
SEIGKKLNLSSNAVDNRIFRERKKLRNKFYKNEKEEILYENNI
>gid:174855  CTC01819  transcriptional regulatory protein
MPIIFLTACDDEVNIILGLDIGADDYITKPFRVRELISRIKAIQRRFKSS
ENNKNILKCGDLILNTETAKLENKGEDIILSAQEYKLILIFMTNAKKVMS
REEILNKLIEGEGSYFDTNTLSVYIKRIRDKIEEDSSNPEYIKTKRGIGY
EWSLEVEKE
>gid:174873  CTC01842  putative regulator of efflux transporter
MKHKKYKINEVAKMHNISKKTLIYYDKIGLFKPQYVDEENNYRYYEMKEL
PILKQIVYLKKIGFSLKEIKNLLDNREHDLVIEALISRDKEIMNAMEELQ
EMHNSIEHLLNFYKKTKYIDKKDLYKPSVKIFTKRKVFYLKCEEEVNEDN
KEEIMLTYRRALNYLQQLNLFSHQEYGTIYLKQGIKEGFSKNVGSFISIP
DKYDIKEQTILKEGKYICMYKNGGYYNEGAVKYLLNWIKENGYEAISDIY
EYCLIDYTFTKSVEDMISEIQVRVR
>gid:174880  CTC01850  SWF/SNF family helicase
MKKINKQGENIMDENRLLQIFNKETSGNNHLKGQRIINNDLVSFLDITSE
DNLIYINSNVISENLFNEYNTKIEIDVRNKSIFSTFCSCKDYEKNEFRKR
NYCCKHLVATFYKALRDLINHPLLNEEKLNGKNIFKRNNKNNTLSILLGD
GKYKNEIKIEVYINKNEWKQNIIAEFRIGFKEKGVSKLYILKDINEFLSA
YHNNFPIKYSKNFTFDIGSQRLSTKDKRLIDFIEMLKNIEGKYKYISKNT
EKNIEGKYLKVPQYLVREFFEVIKNHKVYLNEGFFYRAVETEILDKAPDI
DFDLKKVKENYILKVRDGMPITLDSNNSVFLYGTTIYIPNYEFCYKINPY
LKVFNEMRIVTMGQEDEETILRRLVPDLNFLSNNVSLSRNIKNKIVMEKC
KFNFYFDQEGKEIVLIVKVKYGNFEFNIFEDCKEKIVYRESKKEQQVILQ
LKALDFEEIKEKFYLRCEEEYKFRFFKSEISKLQEIGEVYYSENFKGLKS
IGSNGIFGSIKAGKHDYFEMDFKIGDISPQETYNILRAFRDNLKYYKLEN
GEYIDLQELELNKFLKLLDVISPEEIYGNHIEIAKNKGVYLDSYLEGNKI
KYIKGKKELKEIRDKFKNIEKLKFEEPTNLNGNLRDYQRIGYNWFKTLDY
LGFGGILGDEMGLGKTIQAISFILSNKNSKSLIVAPTSLIYNWIDEFEKF
APSLKVVAINGTKEDREDIIKNIGNYDVAITTYNLLKRDLESYNIIEFDH
CILDEAQYIKNLNSQNALAVKKIKAKTRFALTGTPIENSIMELWSIFDFI
MPGYLYDEKRFSVRYNKRLKESPEVLEELNKLIKPFILRRRKNQVLGELP
NKIEKTLMVTLDNEQKKVYKAYANYAMELIEKKVKDDEFKKSKIAILSYI
TKLRQLCLDPTVTMKDYNGGNGKMEALVDLLLQSIGEGHRILIFSQFTSV
LKNIGKRIIKEGIDFSYLDGSIPSEKRMNMVRDFNDGKNSVFLISLKAGG
TGLNLTSADVVIHFDPWWNPAVEDQATDRAHRIGQQNVVEVIKIIAKGTI
EEKIILLQEEKKKLISELMGDELSSGENFASLTEEEILKLFEV
>gid:174884  CTC01854  transcriptional regulator
MSLMTKKELANSLKKLMSIKPLDKITIKDITADCNVNRQTFYYHFQDIYD
LLDWIYKTEAIDGISEYKTYKTWQKGFLMIFQYIIHNKEFCINSLHSLGR
DHLDNFLYKFTFDLLMEVINEVSEGMDVLNEDKKFIANFYTYAFVNLLIM
WMKNGMKESPEIIIEKLNTLIEGDIEKALKKYEQK
>gid:174886  CTC01856  ATP-dependent RNA helicase
MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTG
SGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEIQLLSGNSKV
SVTSTPIIGNANVKRQIEKLKEKPHVIVGSSGRILELIKKKKISAHTIKT
IVVDEGDKLLDHSNLSSIKDVIKTTMRDRQLMVFSATINEKTLNVAKGLM
KDAEFIKAKSENAINPNITHMYFISDQRDKIEVLRKLVASINPEKAIVFI
NKSDETEIITAKLKYHKIKAEGIHGSSSKKDRQKALEGFRSGKLQLLVAS
DIAARGLDIKNVSHIFNLDLPSDPKEYLHRVGRTSRTGETGTAISIVTDK
ELSLIKKYERDFKIEINSKTIYKGKILNSKKSSRSI
>gid:174917  CTC01890  IAA acetyltransferase
MIEKYLYIGDIFALYYNDLKSVCIVTKENDDVCEIKNISTYEKYQNKGYG
KILIKYIIRYYKDRFKKIIVGTGNSSVSNIHFYKNRGFSYSHTIKDFFIH
NYKNEIFENGIQCVDMIYLEKALDID
>gid:174933  CTC01906  transcriptional regulatory protein
MNNMKKNAIILIVDDDEEIREIINILLSREGFVVWEASNANTAMAMLEKP
VDLIILDIMMPGRNGFELCTEIRKITTVPILFLSAKTQDIDKEEGFCCGG
DDYLIKPFSQSELLLRIKALLRRFFVYQGVNNVSTDNTIKLGDLNVDFET
GKVCINGDKVSLTGIEYQILSFLLHNRKKVLSAREIYEHVWQEPFLPLSN
NTIMVHIKNLRRKLEKDLQKPQYIRTIWGKGYYID
>gid:174937  CTC01910  DNA repair helicase rad25
MRGINMVSKVYDKSDTIRDNIEHKSIETTNDNLIRNEILKASETGLINKL
IDSNLALTPRLIVNDYSKGSKVLSEIISELDKCEEFFISVAFITNSGILP
LLETLKVLNKRGIKGKILTTDYLNFSEPKALKRLLEFSNIEIKLYSKENF
HTKGYIFRYKDHYKLIVGSSNLTQTALTKNKEWNLKVSSLEEGSLTKGVI
SEFNHLWNEADELTFEWIKTYEDIYRKQVEFARKSKVPRLSQYKLKPNKM
QVEAIQGLERLRENGQDRGLLISATGTGKTYLSAFELRNYNPKRALFIVH
REQIAKQALNSFMNVFGDTRSMGILSGTSKDVDKDFIFCTIQTLSKEEVL
QYFDKNEFDYIIIDEVHKAGANSYQKIVNYFNPKFLLGMTATPERSDDFD
IFKMFNYNIAYEIRLQQALEEDLLCPFHYFGVSDVIIDGIELDDNTDFKY
LVAEERVKHIIDKINFYGYCGERVRGLIFCSDKKEAKELSDIFNTKGYKT
IALTGENSQQEREKAIERLEQDEILNSLDYIFTVDIFNEGVDIPSVNQVV
MLRPTKSSIIFVQQLGRGLRKNKFKDYVVIIDFVGNYNSNFLIPIALSGD
RTFNKDTIRKYVMEGTRVIPGCSTINFDEISKKKIFESIDLANFNNIKLI
KESYFNLKQKIGRIPSLNDFDKFDSIDPLRIFATKLGSYYNFLKKYDKEY
TIELNDLEALFIEFISKKLASGKRPHELIMIKNIIHNKVDLIGKLKHELK
EAYNIDFKEITETNVINVLTNEFPTGSAKKTYSKCIFLERKDNYYIISSD
FKKCIENSYFKEMVMELINFGLSRYNKNYSNRYMNTNFQLYQKYTYEDVC
RLLEWEKGEVALNIGGYKYDKITKTYPVFINYDKSDGIEDSINYEDRFYS
ESQLIAISKSGRTITSEDIVKAYNAEEDGVEMTLFVRKNKDDKISKEFYF
LGKIKAVGKPKQFTMKNTTKTAVEIRYRLITPVREDIYDYIIS
>gid:174944  CTC01919  regulatory component of sensory transduction system
MKRIFLVEDDKAIARNLMLLLRSEGFTVTHAPTRSEAFAALAGNKFDLAL
IDISLPDGNGFTVCTEIKETQDVPVIFLTASGDEASVVTGLNMGADDYIT
KPFRSRELIARIGTALRKSGRSRSDFEIRGLHVDTASGIVKKNGNEVFLS
ALEYRLLLVFISNPKSIITRGRLLDELWDAAGEFVNDNTLTVYIKRLREK
IENDPASPQIILTVRGTGYRLGGEYASE
>gid:174997  CTC01979  transcriptional regulatory protein
MNKINCVIIEDEIPSADELNYMLKNYNFINIVGIAHDGIKGLELIKNLNP
HGVFLDISMPSKNGMELAKEIKTWNENIEIIFITAYDKYALKAFEIHALD
YILKPFEEERINMAVNRLLEIVEQKKSDEDIPKILDKLLDKLHSEENLIE
KIPCEHYGKIILVPLSQIYFCYTEKDKVYVKTYNKEYISNYTLNKLQKKT
KFFRAHRSYLVNLNNIKELFSWFNGTYKLVMKDDKNTEIPISRGNVKHLK
DILDF
>gid:175017  CTC01999  ATP-dependent RNA helicase
MENLKFNNLGLNEDILKAIEDMGFETPSKIQAEVIPIVLQGFDVIGQAQT
GTGKTLAFGAPVLNSISNESKKVKSIILAPTRELAIQVYKELTTVAKYTK
FKLLPVYGGDSIDRQIKSLKKGIDIVIGTPGRVQDLINRKALNLSHIEFL
VLDEADEMLNMGFVDDIENILKSCNEDRRTLLFSATMPSEIKKIAKKYMK
KDAKHVAIAQNSMTVSSVEQFYYEVKQKNKFESLCKVLSVDEPTRAIIFC
KTKKGVDELVSSMKEKGFSAEGMHGDMTQSHRLNTLNRFKERTIPFLVAT
DVAARGIDVKDTSHVINYDLPQDTESYVHRIGRTGRANKKGTAYTFVTPK
EFSSLKRIQKISKSKINKRQLPTMDDVLKAKFDSILNDVEQTLSKDNYNT
FIPLVKDLESKFDLTNVTAALMSMLYNDEISYDYDDDNTESNSLDYTRIF
LNVGRKDRLNPKILLEFLDNNANINKSQVGSIDILDKFAFVDIATDRVGD
LMDNCIDKTLCRRKLNIEVAKKSK
>gid:175032  CTC02016  conserved protein
MSKINLEQIDLIIERTKVGYKEAKEALEICNGNVVDALIYIEEKKKAKKE
DLYVTKDEFIQWIKDLIEKGNINRIIIRKKDKIIADIPVNAGVAVTGIGL
MLNPLLTLIVFAAALTELTIEIIKKDGSVEVVNKVVKGIVRDIKSKFTSK
TSDMKDKFSSKEEKYQGDVYSYSVDFDDEEDINK
>gid:175158  CTC02150  transcriptional regulator
MIDLLGKKIKSLRKDNKITQEELAIKIGVSTSMVGMYETDARKPSYEVLI
KIADYFKVSLDYLLRETEYKTYIGTKENCIKFKTVEEAMQFILKQPVVIN
FCEFNVDKMTNRDLIEFANELLNQLKLISYKYKNNI
>gid:175163  CTC02156  transcriptional regulatory protein
MMIMEEYSVLVVDDEDEIRDAIGIYLKNEGIKVLKAKDGIEALMVLEEEE
VHLIIMDIMMPRMDGIKATFKIRESKKIPIIMLSAKSEDMDKILGLNIGA
DDYVTKPFNPLELIARVKSQLRRYIRFGNYKENKNAIVVRGLTLNKDAKT
AMVDGKEVSLTLTEYKILKLLMENKGRVFSIEHIYESVWQEPFYNGENTV
AVHIRRIREKIEINPREPEYLKVVWGIGYKIEKQKINTNMLYSRYIFNSY
SIYSMYRCFKS
>gid:175188  CTC02184  ATP-dependent RNA helicase
MTNFKELGLSNDLIQNLKTQGINSPTPIQRESILLIKEGNDVIAEAQTGT
GKTLAFLLPMFENMSPNINTIQGLIVTPTRELAIQITEEAMKLNESKDLN
ILSAYGGKDIGSQLNKLKGNIHLVIATPGRLLDHLDRNTIDLKNLKTLVL
DEADQMLLMGFKNEVETIIKHTSKNRQTLCFSATMNSSVKKLAYKYMDDP
KLITIQKEEITLKNIKQVLIETTDRNKLDDLCKVLNETNPFMAIIFCRTK
RRVDKLEMDLYQRGYNCKKLHGDLTQSKREKVMKDFKNTKIQYLIATDVA
ARGLDITGVTHIYNYDIPENTENYIHRIGRTGRAGEKGYAYLFIDLKDKE
TLNIIEKGIKTKIERIKNHK
>gid:175201  CTC02199  putative GTP pyrophosphokinase
MLENLIKKIEKNCSNEEIELVKKAYEIANGAHKQQKRESGEPYIVHPVEV
ACILADMGMDADTIVAGLLHDVIEDTEYTYEDVEREFNKQVADLVEGVTK
LGKIKYKSKEEQQADNVRKMLLAMAQDVRVILIKLADRLHNMRTLKYMPV
EKQKEKAKETFDIYAPLAHRLGISKIKWELEDLAFRYINPNEYYSFVKEI
AERRVERIAYIELIVNELTKSLEGSGIKSDIEGRPKHFYSIYRKMINKNK
TLDQIFDLTAIRILVDTVKDCYAALGIVHTMYKPIPGRFKDYIAMPKPNM
YQSLHSTVIGPQGKPFEIQIRTFEMHKTAEYGIAAHWKYKEGITEENNME
LKLTWLREILEWQRETSDATEFMEGFKIDLFSDEVFVFTPKGSVINLPSK
STPIDFAYKIHTDIGNKCVGAKVNNRMVPLDYNLKTGEIVEIITSSNSKG
PSIDWLNIVKSNQAKSKIKSWFKKAKREENTSKGKEYLEKEAKKQGYNFG
EISKGEFLNTILKKYSFNSIEDLYAAVGIGELIASNIVLKFKEQHEHNHK
ANISNEEVIEDFNKNTKANKINNKKSKRKKGNGLGVEVKGQNNILVRSSK
CCNPVPGDEIVGYITKGRGVSIHRRDCKNLQNLIDEDISKIIEVNWIGYS
SGEYIAEIEVESEDKDGLLTQVMDIINIERANLYAINAKTTREKKALINI
KLKISNIEQLENLMKKIRKLNGITDVYRTKN
>gid:175218  CTC02220  transcriptional regulatory protein
MYQEALGYEGLRNSINKYFWNNKIDVDNILIVSGAQQGIDIVSKSIINVN
DNIIIERPTYGGAIAVFKWRRANIFEVPMEKDGMDLDYLESLVKKNKVKV
VYVMSYFQNPTGITYSLQKKQRLLNMAKIYDFYIIEDDYLSELIYNNDEY
VSFKSMDRNDRVIYIKSFSKIFLPGIRLGYMITPNKFREVIQSSKINTDI
ATSSLMQRVLDIYIRKDVWKGYIEKLNSMYKNRYLFIRDNIKYLEKYLDI
YIPTGGLHIYAKIKNSNINCLELFKMLKEQGILITPGVIFYKKPEEGMRY
FRISFSQTDVEDIEKGFRTIEKILKEWNR
>gid:175219  CTC02221  transcriptional regulatory protein
MDKYKIDFEDIKTSKYENIAQHIKELVDKNIVKDGEKLPSIRKLANFLKV
NNTTIVNSYKKLEEEGYASQKVGSGTYAKRKEMSININKKYGKIVSKINL
K
>gid:175242  CTC02246  RNA polymerase sigma-F factor
MKFMSEGVVKKSSYDYDDNILLLEKAKNGDKKATDKLVELNLPLVSAISK
KFLNRGYDYEDIYQIGCMGLVKAINNFDSSYNVKFSTYAVPMIMGEIKRF
IRDDGIIKVSRSLKIMARKLYYHRETLCKKLGREPSIEELSEYTGLEIEE
IVYAMESSSNLQYLHDVIHQDDGAPIMLIDKISENYSEDSDIINKLALKE
ALGKLDAKSRQIIMLRYFKDKTQIEVAKMLGISQVQVSRIEKRVLKTMKE
KLGNW
>gid:175294  CTC02299  conserved protein
MERMHMFEDTLELAENKLLLLYIIDKINLPISNSQVTDIVLENNFINYFT
LQQYLFELISSNFLKTIEDGNKHKLQITSKGKKVLSLFINRVSSEKIVTV
DNYLEKQINNIKKDISVISDYTIDYKDKFVVTLKLNKDEINLIDIKFTMD
SKDEAKELCEKWKKNSSKMYMEIFKTLLD
>gid:175338  CTC02346  catabolite control protein
MKKVTMMDIAKIAKVSKTTVSMVINNRDSGISEETRKKILSIAEELNYIP
NSLARSLSTRKSGTIGIILPDITNPYFSEMARAIEDVANSLGHNVIFCNT
DNEEKKEEKYTRLLLSKAVDGIIFISGGESAKSIDMLKKNNVKFVMVDRP
IKTDKNSYGIYSLNKKGVIKGMNYLLSKNIKKIAFVKGPKRLENTKERFN
GYKEVMESYNLYNEFYVYEGDFTIESGIEVTEKIIREIPDVEAIFCSNDM
MAFGGIKVLLRNGYKIPEDIAIMGFDNINISKYIEPELTTIAQPIYSMGK
EACRMLISIINGDKEVKRQIFFDTDLIIRKTV
>gid:175357  CTC02366  hypothetical protein
MSKSKKHKRNKKNKNNMNDSLMELINNVDLEEVMSLLSGQNTNNINDDYD
DEGNTQMDLANLVKNLGYMNTSNQNQFNDPTIQLINILKPIVENNRESIE
KLLQVYFLSRLISKK
>gid:175403  CTC02406  hypothetical protein
MCFYGEESNIFYIYFQIIKKYKKYMEKSLSGFNLIPAEIDILSFLVNNIE
KDITASEISMCRGISKGLVSRAVHSLKTKNVIELKENPQDGRSVYIKIVD
EEDSLIKKVKEINEKFKEQLIKDMDDADLKLFLKINNKMLNNIKDVEVE
>gid:175465  CTC02471  putative transcription regulator
MFSLGVIIMAKLIENPKDMIFQSAKSIAKSKGIDKVNIRLVAKDCGIAVG
TIYNYFPQKKDLIIAIIEDFWSGAFKEIRKHNAENKDFLAQVTSTYNCLS
FYLSNFKENWIHQLSFLKADEKMAGRKKEDEYFENVYGIIVRAIENDPKI
SENIWDEEFTKEKFASFVFNNMLIMLRSDEKHIGFFIQCLKKILYSK
>gid:175484  CTC02492  cytosolic protein containing cbs domains
MTKHGKVIRYVSQLPIGTKISVRTIANLLEISEGTAYKGIKECSKMGIVT
TIPRIGTIRIRKPDYNGEENITYGEIVNIVDGNIAAGKKSIHKTINKMII
GAMTLERIKEYITPNSLIIVGNRERVQELALLNGCGIIITGGSECSNYIK
ELADTKEMPVICSLYDTFTVAKMINRAMFHNKVKKKILLMKDIMNKEFLY
FRNDIQISECADMIKRNNNKFKNINVIPVVNENMRFLGLVELKDIMDAEP
LENIETIMRKNITTLEGKTSVAYANYVIETEVNDFYPVIRGKELIGTVNR
QDIIQALKYISKENKDYRNLDSEVLKNFKSELGQKAMHFYGTITPEMLDP
LGIASWNSLNMLISSMATFYLNQINITNLFVDNISTYFMKPVQIDTEIEA
NVSIISSSAAFCEFLGKAFYKVEVSLFDDKKDFIAKSLITIKAIENKL
>gid:175520  CTC02531  transcriptional regulator
MDKYIRLEITAVDRMGMTLKILDKIYELNINLTSVEVFPNKVYVKVENIH
KNKISKLIKNIYSIDGIYNIKKVELLEHEKYHRKLLAVIDSVDEGIMYIN
KDLKVEVFNKYCENIFYYDKGYIEGKDLRTLIKDDSIIDLIKSGKNEENI
KIKVDTGKGAKQYLTTITPVKDDEDNNIGVVSSIRDIKKVMEIANVFSSS
HEGVFKEIIGNSEAIKKVKEMIKSVAKNNSTIMLRGESGTGKDLFAKAIH
NLSVRSNKKLVTVNCAAIPPSLIESELFGYEKGSFTGASSSRDGLFKEAH
EGTLILDEIGELPLLVQAKLLRVLQEGVIRKIGSNKEEKVDVRIICATNR
NLEYMVKNKEFREDLYYRLNVIPVFIPPLRDRMEDIPILTGFFIDKLNKK
LNKRIMGAKLKFIEELLEYKWPGNIRELENVVERAMNLCSGDMLKKEHVM
LNLSKTPTIEEETQDKDLKLKDIIETVEKEAIIKSLKKNKSFRRTAKALG
VSHTTIINKVNKYNIKWKE
>gid:175555  CTC02569  transcriptional regulator, putative regular for glutamate degradation
MIEIQVKVDKGNKIPLYLQLKKQIMDLVKDGSLKVGHKMPTERELSEELK
ISRNTVSMAYKELEKEDILKSYQGRGTFVLEEVKLWKNENIKEKIKKFVD
LAFEESIEAGIDADEFLEIVTERIEEKRRLMDDIKGIYIECNIEQSKVFA
EQLKDRTAIDFSAMTVNDLKSMDSKSQELIKNSQIIITTFNHVYEVRSLL
REYNKKVLGVAITPNLETIVKIARFPLGTRFLFVCITKEFKFKSMSALED
AGLANVNITYTNSFEKDKLKDEVSKCDVVIASPGRYHDVEEISKGKEIIN
FAYNLDDGSVKALKSKLLEVKYLK
>gid:175564  CTC02578  DNA-directed RNA polymerase alpha chain
MLEIEKPKIECIEMTENGSYGKFVVEPLERGYGITLGNALRRILLSSLPG
VAVNSIKIENVLHEFSTVKGVKEDVTEIILNIKLLALKMTGEGPKTIYID
AKGPGVVTAADIKTDSDVEIINKDLHIATLDDDGKLYIEMTVDRGRGYVS
QNRNKVEGMPIGTIPIDSIYTPVKRVNFTVANTRVGQITDYDKLTLEIWT
NGTIMPDDAISLSAKILIEHFKLFMTLTDHADDVEIMVEKEEDKKEKVLE
MTIEELDLSVRSYNCLKRAGINTVQELTERTVEDMMKVRNLGRKSLEEVE
QKLEALELGLKQSEE
>gid:175590  CTC02608  DNA-directed RNA polymerase beta chain
MISTMNINFRREDIPLFELNNFDALQIGLASPEKIREWSRGEVKKPETIN
YRTLKPERDGLFCERIFGPTKDWECHCGKYKRVRYKGIVCDRCGVEVTKS
KVRRERMGHIELAAPVSHIWYFKGIPSRMGLMLDMSPRSLEKVLYFASYI
VIDPKETPLLKKQLLNEKEYREAIENYGEEGFVAGMGAESVQKLLEEIDL
NQVSKELKEALKTSTGQKKIRLIRRLEAVESFRKSSNRPDWMIIDVIPVI
PPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNE
KRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVQGGLSHNIK
SAKRMVERVQSEVWDVLEEVISDHPVLLNRAPTLHRLGIQAFQPVLVEGR
AIKLHPLVCTAYNADFDGDQMAVHLPLSVEAQAEARFLMLAAHNILKPSD
GKPVCVPTQDMVLGSYYLTLDKENAIGEGRIFSSPEEAIMAYQIGDIDIH
AHIKVRISKEVDGEEVCGIIDCTPGKLIFNESIPQDLGFVDRSVPGNEVK
LEVDFLINKSSLGKLINKCYMKHGPTKTSIMLDKIKEKGYHYSTIGAITV
STSDMVVPEAKKRLLAETDVEVNKIDKMYRRGFISEDERYERVIEKWTKT
TDLVADELMKNLDRFNPIFMMADSGARGSKSQIKQLAGMRGLMANPSGKI
IELPIRASFREGLDVSEYFISTHGARKGNADTALKTADSGYLTRRLVDVS
QDVIVREEDCGSKEGFEISEIREGNEIIEPLSERLTGRYSAEDIIDPNTG
EILVKKEEYIDGEKAEEVEKSGVKKIKIRSVFTCKSKHGVCAKCYGMNMA
TAEKINIGESVGIIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRVEE
LFEARKPKGLAIVSEINGTIRIDETKKKRTVVVIGETEEISYDIPFGSRL
KVSNGDVISAGDEITEGSVNPHDVLRIKGPNGVKNYLLSEVQKVYRLQGV
DINDKHLEVVVRQMTRKIKIEESGDTEFLPGTMVDIFDFQEENAKAEEEG
KETAKGRITLLGITKAALATDSFLSSASFQETTRVLTDAAIKGKVDPLLG
>gid:175591  CTC02609  DNA-directed RNA polymerase beta chain
MVHPVQVGKRTRMSFSKIKEVCEMSNLIEVQLDSYEWFLQEGLQEVFDDI
NPIQDYTGNLSLEFVGYKLDMENIKYSVEECKERDATYAAPLKVSVRLIN
KETGEIKEQDVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYDVSL
DKSGKELFSATVIPNRGAWLEYETDSNDIIYVRIDKTRKLPISILIRALE
YGSDLEIIDYFGEDERLKASIEKDNTKTKEEALLEIYKRLRPGEPPTVDS
AMSLIGSLFFDAKRYDLSRVGRYKFNKKLALHLRIANQISAQDIVNPATG
EIVVQEGEKIDRDKAIEIQNSGINSVDIQLDDKVLRVIGNNFVDIKSFVK
FDIDDLNIKEYVHYPTLKEILDNYSDEEMIKEQIKKNINVLIPKHIIRDD
IMSTISYEIGLPYGIGYTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERV
VKERMTIQDQDSITPQALINIRPVTASIKEFFGSSQLSQFMDQTNPLSEL
THKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINS
LATYAKVNEYGFIETPYRKVDKATGVVTHDIIYMTADEEDHYLIAKANEI
LNDDGTFIDDKITVRDQEDVLVVPKEEVDFMDVSPRQLVSVATAMIPFLE
NDDASRALMGSNMQRQAVPLLKPEAPIVGTGIEYKAAVDSAVLPKAKKPG
VVTYVSASEIRVKKDKPDSNGDVDKYKLLKFKRSNQGTCINQKPLVSKGD
KVDTKTVLADGPSTDLGEIALGKNIRMGFITWEGYNYEDAMLISEELVRE
DVFTSIHIEEYEAEARDTKLGPEEITRDIPNVGEDALKDIDERGIIRIGA
EVRSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEA
GIIVDVKVFTRENGDELSPGVNKLVRCYIAQKRKISVGDKMAGRHGNKGV
ISRVLPEEDMPFLPDGRPLQICLNPLGVPSRMNIGQVLEVHLGLAASKLG
WHVATPVFDGATEPEIVECLEKAGYEGDGKTVLYDGRTGEPFDNRVTVGY
MYILKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGVPESFKVLIKE
LQALCLDVKVLNDDNEEIAIKELADDDMVELEVNIEGSEDYTEPKQPNDN
YLEEEENKDKESDYDEDLNFDDLTKGLQLDDFNDEH
>gid:175598  CTC02617  RNA polymerase sigma-H factor
MRDFRGDTVGKGVKKENKIVFKNMLDEEVVLEAKEGNTRAQEYLINKYKN
FVKAKAKSYFLIGADREDIYQEGMIGLYKAIRDFRADRLASFKAFAELCI
TRQIITAIKTATRQKHIPLNTYISLNKPIYDDESDRTLMDVLSEAKVSDP
EELVISREEIGCIQNEMEEVLSALEMEVLMSYIDGKSYQEIACDLDRHAK
SIDNALQRVKRKLEKFLNSR
>gid:173695  asnC  regulatory protein asnC
MTFMDITKNQQLDSLDLQILNILMKDSRTPYLEIARQCNVSGGTIHVRLK
KIEEMGIIKGSKLIVDTSKLGFDICCFVGINLEKASYLTEVANKLEEIPE
VVELYYTTGSYSIFLKVLCKNISYLQKLLANKLQTIEGVQSTHTIICLLE
KIDRNIDLHI
>gid:174339  codY  codY protein
MSSLLEKTRQLNKILQKSGAEPVVFDDICNLLSEVLSCNVYIISKKGKIL
GYDLSTGFECQTVRDKVVPEKRFPEHYNNKLLNVHGTKSNLENQGECVFE
SGEDCGVKNKLTTIVPINGNRERLGTLLLARFDVPFTDDDLIISEYSATI
IGLEILRSKQDEIEEEARKKAVVQLAIGTLSYSELEAVEHIFNELDGPEG
LLVASKIADKVGITRSVIVNALRKFESAGVIESRSLGMKGTHIKILNDRL
LEELKKIK
>gid:175615  ctsR  transcriptional regulator ctsR
MARLSDIIEDFIKEMLMNNDERELQIQRNELAQQFRCAPSQINYVLTTRF
TTDKGYYIESRRGGGGYIIIRHIGFNDYKELFQMLNNKIGDGITFYNACS
LIESLLEADIIDKKFSELIKVAINDRTLDIIPEDKNELRANILKNMLFVL
LS
>gid:174256  deoR  transcriptional regulator, deoR family
MEYLEKEGLLKRVYGGAVLKKIDNNQLKFENREKEFSSEKKEIANIATRY
VIEGQSLAMDASTTNLEIAKVLKTKFKKLTILTNSLAIANELIDMDKYTI
ILTGGILKNDEFSLVGDMAQKYIESFNIHTAFISVSGVSLKEGLTDYILD
HLQIQKKFIEISQNVIVLADSSKFDSVSLLNVCNLEDINMIITDSKIKKN
VLEKYLNNGIEVINI
>gid:174705  fliA  RNA polymerase sigma factor for flagellar operon fliA
MSIAEECDVKEGLVKKYIPLVKYIASRVIIGKTKYIDYDDLVGYGMLGLM
DAMQKFDPSKGMKFSTYASIRIRGSMIDELRRISPISKSAMDKLNRYNEA
VEKLQMKNFKEPKLEEVAKELDMSLKEVAQIENYINYISIVSLEDFIFSD
EEDMSLMATVVDKNSPSPEKILEEKELIEYLEKAINKLKERDRIVLSLYY
YERLTLKEIGKVLDVSESRVCQLHSRAIVHLRSELKKLKIIN
>gid:174920  gntR  transcriptional regulator, gntR family
MYLYDKYTIVHFWRMTMEIIISNNKSSPIYEQITSQIKAFIMNGELQTGD
PLPSMRALAKSLHISVITVQRAYEDLQRDGFIETVTGRGSFVAAQNKDFI
KEEQLRNIEKKLEEAANLGRTHGIKLEKLIELLRIFYVEEE
>gid:174734  gntR  transcriptional regulator, gntR family
MKIKLDDSKPIYLQIAEGIEDDILNGFLEEESQVMSTTQFSEVYGINPAT
SRKGMSLLVDEGILYKKRGIGMFVKSGALEYIKNKRRKRFFKDYILETLK
EGQKLELSKEDIINMIKDYRE
>CTC00820 gntR, transcriptional regulator, gntR family
MLNKKDRSSNVLINKKTLSDQIYDILKMEILKREIPFGSKLVNRTLQKKF
GVSSSPIRDAINRLNQDGLITSIDKSGATVVDFDYDFFLEVNEVILYVVN
TGVKLSFEKSDTEEVCKYLEKYLLLQEKYIGTDEFYDYDYKFHKTFIKYS
KNTRLEKIFKEYNVLHEMLVRSYYEPETFQIQEDSIKMHKQILDAFRNKN
YGLAMTFTEEHYKGAEKIFKKMFEEKKEKLKEGN
>gid:175002  gntR  transcriptional regulator, gntR family
MINIDSRSSKSIYQQIVDQIKENILKGILKPGDKLPSVREMSSLLTVNPN
TVSKAYQELERQKTIETIRGRGTYVSRNYKPKMDDDKLKFIKEELKKLII
EALYMGVDKEKFINILDELYKDFERM
>gid:175462  gntR  transcriptional regulator, gntR family
MEEIFKKIDANDTRPAREIILEELRAAIFDRKLEAGDRLIENNIAKSMGV
SRTPVREALRQLEIEGLAINIARKGTLVKGISKEDIIEIYDIREVLEGLA
VRGACLNISRKEILRLKEIIEIMSKCINKNDTDKYIKSHNEYNRIILNAS
KNKRLISKLEYIYEYLKSMRKVTLSNETRREKALLEHKNIVEAIEEGDEV
LAERLARKHVVNAKNSFMSNI
>CTC00804 gntR, transcriptional regulator, gntR family
MKIIISNSSKEPIYEQIATQIKNLILSNKLKEGEILPSIRNLAKELSISV
ITTKRAYDELEKEGFIETTPGRGSFVASQNKELLRERRLSIIEKKLTEVI
NDCKLMNLSLQEIMEMIKIIY
>gid:174935  greA  transcription elongation factor greA
MKNILTEENMNKLKEELEYRMTTKRAEIAKEKLEAAAHGDRSENAEYKEA
CANYRENDNRIQYLLTMISTASVIDEKNQDKSVLGVNSKCKIKFVEDDFE
TNVSLVTTMDAEPEKMHISVESDLGKALMGKKVGDVVEVYAPGEKYTVEV
LEMI
>gid:173351  greA  transcription elongation factor greA
MLIYNNVNDFDENYYFYKKDLKGENDMSDSKKYVMTYEGVKKLEEELEYL
KTVKRKEITQKIKVALSFGDLSENSEYDEAKNEQAFVEGRIIQLENMLKN
ATIVDENEMPADTVNVGSIVKVKDFEFNDEEEFIIVGSAEADPLENKISN
ESPVGKALIGKKAGEKVEVIVPDGISKYEIISVRRN
>gid:175048  hrcA  heat-inducible transcription repressor hrcA
MLINGVIIMEMDKRKIKILQAIIHDYIQTAEPVGSRTIAKKYDLGVSSAT
IRNEMSDLEDMGYLEQLHSSSGRKPSDKGYRLYVDKLMNIQKLSSMEECA
IKTHIINSALYEIEKVVREASAILADLTKLTTVVMSPSSIESYIKSIQLI
GLDANTVLLVLVIDTGIIKNNVIKLHAKMTIDELVKINRILNIKLNKIRV
ESINLDFLKVVLEEFKDYEKWLKDILPVLYETLLSGIDSNEIYLEGATNI
FNYPEYNDIQRAKDFLSLIDDKDKVKNLIKSDDNITIKIGKENFIEDAKD
CTIITAVYKLKDRPLGTIGVIGPTRMPYSRVVSILSTLVDELDKLLKDDN
I
>gid:173632  iolR  DNA-binding protein iolR
MEVLMLKEDRIKGIENYVIKHENVSINTLCSLFDVSKNTIRRDISELERK
GVIKKIYGGITLKNKTSTVPFQQREIKHKETKKTIAKAASNLVENGDIIY
IDSGTTTMHMIPFLSDKKNVNIITNNVNVIVNSFPYKNLNILSTGGSLSR
NTNSLIGIESINFLKNYNISKCFMASTGVSIKKGVTNSSSFEYEIKKTVV
KQSSKIILLADSSKLGVASLMTYCNLEDIDTFITNEPLNNDYLDFFNKNN
IELIISDNL
>gid:173971  lacI  transcriptional regulator of the lacI family
MMPTINDVAREAGVSISTVSRVLNNNYPVKEETRKRIEEAIEKLNYKPNM
LARSLITKKTSTIGVIVPGITNLFFPTIVESIEDYSKDQGYSIVLCNTRG
EALKEKEIIENLMSKGVDGIIIIDPTLDNLKNKYLEDISMKLPIIIVNGS
PEELKGNFICYDEKVGTLEAFEYLLELGHKEIAFIRGSKSYSYDIKEKIY
TDIIEKNNLKYNEILDVGKGNSIEVVENTQKKVEEFLLNKNKPTAIFACN
DLMALGVVNACNKLNLNVPQDISIIGFDNTLISNIIHPKLTTVDLNMKRI
GNIAALKLLEIIEDKNKSIKYTMETKLIVRESCY
>gid:174376  lexA  lexA repressor
MARQNKQEAIYEFIKEQLREKGYPPSVREICNAVELRSTSTVHGHLKRLE
EKGVIRRDPTKPRAIEVLEHSIMKKEMVDIPVVGTVTAGKPILAVENIED
TFALPINYVRNKKQLFALKIKGDSMIDTGILDGDLAIVEKNNSVLNGEIV
VALLGDRATVKRFFKEKDYIRLQPENETMEPIIVKQCEIIGKVVGVYRKY
>gid:175066  lytR  membrane-bound protein lytR
MKKIKKRRKKNRAKGIFLILLLLIATTASFFYFYLLSFSEGKSEKSPPVI
SKSGDPVNILIMGVDIGGIESDNEPKRTDTIILMNYNPKNKKINIVSIPR
DTRVVINNNWQKINNAHAIDGVNGLINSVENLLKVNINYYAKLNFKGFRS
LVDSVGGIDMEIAQNMYYDDASQNLHINFKKGEKVHLDGKKAEEFFRWRK
NNDGTGLAEGDLGRIKNQHLFIEKFIAKVKSPSTIARLPIMLSTLPKYVE
TNMEPNDMVKYAYNFLRVEKSDMQIRTLKGEAKYIGKISYFIYDENGNRD
IISMFRGGTSESSYNINEEDIKVEILNGTNVNGLAATIGKKMKAKGFSNV
SVGNTNQSKESKIIASGLDKKTLKSISKELGIKNVENSSLRDRGRFVKVI
IGEDFKK
>gid:175061  marR  transcriptional regulator, marR family
MLGKFYFKKYGGVFLFDLDTCLGFITNNVAKEVAECFNDRLSLLGITRVQ
WIALYYLGKEGTISQCDLGEKMAIKASSVARLIDRMEREKYVVRKRSKED
KRRVDLYLTDKGKELREKLLPEGEKMSQLVSKGISSEDIQVFKDVLHKMS
VNLMEENK
>gid:173266  marR  transcriptional regulator, marR family
MSKSMNVLNELLVDTFNDILTIEQNALQSGEFRDLSVTEMHTIEAIGMYT
QKTMSEVANKLNITVGTLTTAINNLVKKGYVERSKSEKDRRIVYIQLTKR
GKLAYRIHDKFHLDMIKETISGLTDEEEEILIASLEKLNNFFKEKYHLEK
D
>gid:174924  marR  transcriptional regulator, marR family
MITEENLLTEFTKLYEKQDVLSKIMNDSLFEKYGNSEVHCIDAIGNLEKA
NGTQIANYLNITRSAVSKIIRRLQKENLIISSQKPDNKKEIFYTLTNEGN
NIFKQHKQAHEKWEIRDTKFLKTISTNEKETVFKFLKKFNSYLENIIKGA
ENDN
>gid:174051  merR  transcriptional regulator, merR family
MSSKTYMYGGEYMLKIGDFSKLSRISIRMLRHYNDIGLLIPEDIDEFTGY
RYYSEVQLPLANRINALKDMGFKLSTIEKILKEYGDNEALEKYLLIKYEE
LNEKSEDINRRLTLLKSTIKRLRKDEDAMKYNVTLKEMPKRQVASLREII
PSYEMEGILWEEIRKEMDAQNVQFGNPCNTIAVFHDKGYKESDVDVEIQI
SVEGNYEDTKKVKFKTVEAIEIASVTFKGGYEQIGEVNEAIANWIVDNNY
EFNGAMFNIYHVSPAMDKNPENWVSEVCYPVKKK
>gid:175595  nusG  transcription antitermination protein nusG
MSDKARWYVVHTYSGYENKVKANLEKTIENRNLQDWIHDIRVPMEEQVEI
KDGKKKIALKKVFPGYVLIKMVMTDDSWYVVRNTRGVTGFVGPGSKPVPL
TDIEVESMGISDEVIELDIEIGESVKVTTGPLENFPAVIQEIFPEKHKAK
VLVNMFGRETPVELDFNQIQKLD
>gid:173990  padR  putative transcriptional regulator, padR family
MTKKLSDDKGYNYDKYKKELKNFKKVEKENKAVGQVFTKGLLPLYVLQIL
SISPTNGNDIATQIGKKTNGLWIPSTGGIYPLLKKFEKENLVEGRWDDRN
NKMQKIYTITESGKKDLEERKQLLKQNIEEALKVFNIVYKDLYE
>CTC00601 padR, putative transcriptional regulator (padR family)
MARSTQMLKGILEGCILKIISKNETYGYEICEKLIEFGFEEVTEGSVYPI
LIRLEKKRLLHSLMKPSPLGPMRKYYYLTNEGKDELSEFITTWYNIKKNV
ENVLEG
>CTC00619 padR, regulatory protein (padR family)
MKNRKENFMARKDSIDIGELTDSAFYILSSVIEEKHGYLIMKTIENVTNN
EVTIGPASLYTTLKKLLAADLVELNPNTDGNKKVYKITNKGRDMLIKEIE
RKKQMIKFAEKFLDLEKENIHEK
>gid:174958  parB  chromosome partitioning parB family protein
MSEKRLMSLDDMFGYTQAKKETKSGITEIEIEKLVSFSNHPFKLYEGERL
NDMVESIKEFGVIVPIVVRTIGTSYQILSGHNRVNAAKLVGILKVPAIIK
EGLTEDEATLIVTETNTMQRSFSDLLHSERAAVIYTRHKAMANQGIRNDL
LNEIERLSKSNEIKEDETFSPLGKKLRTHEEIGETYKLSKNSIARYLTCK
DPRGLLTNYEQKKAKNIK
>gid:173239  parB  chromosome partitioning protein parB
MSKKSVLGKGLGALIPDEIQEKEIERKNTLPIESIKSNDNQPRRSFDEEK
ISELSQSIKEFGIIQPIIVKKIANGTKYEIVAGERRWRAAKLAGLEEVPV
IIKELSNREVLEISLIENIQREDLNPIEESKAYQELLNSFNLTQGDLSKK
LGKSRVTITNSLRLLNLDARVQEMLIRELITEGHGRALLAIKDINIQFEI
AQKIIINKLSVRETERVVKSLNKKEETKDSIVSKNNPYYEDIKNRLEDFF
QTKVKIDNKNNKGKIEIEYYSEEDLQRIIDILNLE
>gid:173549  phoP  alkaline phosphatase synthesis transcriptional regulatory protein phoP
MEHKIIVIEDEFSINDILTFALKEEGYRVKSTFSSQEARKIMKEFRPNLV
LLDINLPDESGFELCKFITCKYKIPILMITARNDLVDKVLGLELGADDYI
TKPFHIKEVMTRVRVALRRVKKYSVVKENKEFIELNDEVKINLESREVFK
NNREIKLKPKEYDLLVFLAQNRNIVFSRETILDRVWELEYDGEIRTVDIH
VRRLRAKLDSNNGQSIIETVFGVGYVMR
>gid:174973  phoP  alkaline phosphatase synthesis transcriptional regulatory protein phoP
MLPGIDGFQVCKELRQEFPSMGIIMLTARTQDMDKIMGLEFGADDYVVKP
FNPSELILRIKALLRRINSTDSTKENILVSSIFKINTYSQKIYKNEKEID
VTPKEYMILKIFLENEEKAFSRDELLDLVWGYDFVGDPKIVDVNIRRLRA
KIEDEPSNPKYIETVWGKGYRWRKL
>gid:174312  recG  ATP-dependent DNA helicase recG
MDIYNSVGVLKGVGPKTLENLNKCGIFTIIDLLLYFPRDYKIIKTCTSLK
DALEKQEIIITAEVLEIKRDVRTRSGKVISTIILQNEEERIKCRWFNQPY
IKNRFRIGKKYTLNGKLDVYKGEKLIINPKTVEKNAEATNCTKEIVIPIY
PLREGVKNNTLVKLIKDVLDKLIIDENLPTWIMKKYNFCSLDESIRAIHN
PISESQLEFAKRRLKFQELFTYSLKIALLKESRKQSNKGISFKIYKEEIN
KLQDKLNFQLTKAQKIVLEEILKDQNKNISMNRLVQGDVGSGKTILAIIT
LLNVAMNGYQGVLMVPTEILAQQHFIEIKNLLSEFNIRVELLCGSTSNKE
KSNIKAALKGGEIDIIIGTHALIEDDVEFEKLGIVITDEQHRFGVMQRNK
LFTKGEGADILVMTATPIPRTLSLYLYGDLDISIIDELPPGRQKVDTYFI
NEKKRDRIYSFALKEINEGRQVYVVCPLVEENDQLELTSVEELYKDLKEN
YFNEIEMEILHGKMTPKEKNDIMLRFKNNEIKILISTTVIEVGINVPNAT
IMVVEGAERFGLAQLHQLRGRVGRGSEKSYCILMGNIKNMNTRKRMETLV
KSNDGFFIAEQDLKIRGSGELFGFRQHGEENLILSNPIEDIEILKIAHNE
SQELLKSNKKEDLKILGYLGEKIDKHKEYICFN
>gid:174394  rpiR  transcriptional regulator, rpiR family
MFREDRKGLIVVEVENQDLIKTIQVKFPRLSKGQKLIAEYILKHYDKAAF
LTAAKLGSSVGVSESTVVRFANELGFSGYPKLQKALQELIKNKLTTVQRI
ELSNDFIDQESTLKSVLKSDMENIRYTLEKINHKTFDDVVDSIFSAKRIY
ILGLRSSTPIAEFLGFYLNLILDNAKIISYGVSDIFEQMMNVAKGDLVIG
IGFPRYAARTIEALDYAQNNEATVVAITDSLLSPLAARANHTLIAQSNMA
SFVDSLVAPLSVVNALIIAVGLREKDKISSTFSKLEHIWQEYEVYSYKER
RRD
>gid:175026  rpoD  RNA polymerase sigma factor rpoD
MIHSKVEGGKIMKDKNAKMKVLKNLIDKGKKSGSLTYKEIMDELEEIELT
PEQIEKVYEALESMNIDVLGADEIKKEEEEEEIDISVPEGISIDDPVRMY
LKEIGKVPLLTSEEEVDLAQRIEAGELKARKKLAEANLRLVVSIAKRYVG
RGMLFLDLIQEGNLGLIKAVEKFDYRKGYKFSTYATWWIRQAITRAIADQ
ARTIRIPVHMVETINKLIRVSRQLLQELGREPTPEEIAKEMEISVDRVRE
IMKIAQEPVSLETPIGEEEDSHLGDFIPDDDALAPAEAAAFTMLKEQLIN
VLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALR
KLRHPSRSKKLKDYLD
>gid:173975  rpoD  RNA polymerase sigma factor rpoD
MEASNAKVVDDYINMYLKEIGQSDLLTAEEEIDLAKRIEKGDERAKSELI
KSNLRLVVSIAKKYIGRGLSFLDLVQEGNLGLMKAVDKYDYKKGYRFSTY
ATWWIKQAVTRSIADQSRTIRIPVHMNEVISKMIRTKKKLEQELDREPTE
EEIAETAEISIEKIKRIYNVSQDPVSLETPVGENEDTILQNFISDDRYLP
EDKVTEQMLGDTLSNVLSTLSPREERIVRLRYGLVGDGESRTLEEIGREF
NLTRERIRQIEARAIRKLRHPTRIKKLQGYFE
>gid:173517  rpoN  RNA polymerase sigma-54 factor rpoN
MKNVDLGFELSISQEQKLIMTHQMQLSIKILQLSSYELTKLVEKQLQENP
LLEINYEEIKKEESLEENLDEVLKYKNIIKNLQDDNYINNQHSEEEVSPF
NFISSKKSLKEYLLEQIMYLDEKEYIKCICNYIIEGIDERGYLAEDIESI
SKELKVSINLVIKALNIVQDLEPDGIGARDLIECLRIQCNKREIKDEKIY
NIIDNHLEDIAENKYSNIGKKLDISPKKAQMYGDFIKSLQPKPSSGFYTG
EEVRYIVPDAYIKKIGREYVILMNESITPKLTINNLYKNIINNNEDEAAV
EYVKEKLNSASYLIKSIEQRKSTIYRVLEKIIEIQREYFDKDKKHLKPMT
LKEIAEELKVHESTVSRAIREKYIHTDKGIIKIRNLFTTAIESKGNEDSL
SNIAVKNMIEKFIEEEDKKKPLSDQNIADRLKKKDVNISRRTVAKYREEM
GIKSSMGRKRY
>CTC00688 sigV, RNA polymerase sigma factor sigV
MYDVLLVKRAIRGNKDAFTSLIKQCKNELYKIAYIYTKNEDDALEAIDES
IYKAYISINTLNNPEFFKTWIIRILINECITLLKKKNKIVLENNNTKFEI
QCNDDYDSKFEFEDLYKAINTLNDKQRTAIILKYFQDLKISEISDVMQIS
DNTVKSHIRRGILSLKKSLKEDLYYGQ
>gid:174888  sinR  putative transcriptional regulator sinR
MTYIPVGYNIFYKNTLIEYVVYKGDFKMFDANIKRIREQKGLGVNELSRI
SGVNASYISALERGEKQNPTITILKKLANALEVTIDELMKSEPINYDKLA
DWDDKHHCSFKEDYFDGEFKTAESAMQFILNQPVIMGFGGFDVNKMSDDE
IVEFGNDLLGVLKTLGSKYNK
>CTC00628 spaR, subtilin biosynthesis regulatory protein spaR
MACILAIDDEEGILTIIKSALEKEGHNVTTVSNPTCLLKDKYLKYDLILL
DVMMPEIDGFSLCKEIRNLVDCPIIFLTAKTMEQDIVMGLSLGGDDYISK
PFGISELRARVAAHLRREHREKQNAFSISNVKFNITSKEAYYNEKLIPFT
KSEYNICEYLAMNHGQVFSKDRIYEKVYGTYGNSDTTAIVEHIKNIRNKL
KNMGINPIETVWGIGYKWKE
>gid:173209  tetR  transcriptional regulator, tetR family
MNKTKKLIFKAAIKIFSQNGYNGTTMDDIAKEANVAKGTLYYHFKSKEEI
FKFIINEGMNIISEKLDDISKQDSDSISKLKAVCKAQLSVVYENRDFFKV
IMSQLWGSEIRQSEIREKIEKYIKDIEKYIKDAVDEGGIKKGETYFMAYA
VFGMLCSASIYELINEDKEKIDEVAESLMDYILKGIES
>gid:174254  tipA  transcriptional activator tipA
MEYTVKKLAKLAGVSSRTLRYYDEIGILKPARINSSGYRIYGKTEVDMLQ
QILFYRELGINLKNIKDILTSPSFDKLCALNSHHKKLLEKRNQLDILISN
VEKTIASTEGRVKIMDREKFQGFKKKMVDDNENKFGKEIRGKYGNHEIEK
SNSKIMNMTKEQYYELMKIEEEFKKTLSKAFKTHDPASDIAQKSAKLHKK
WLTYYWPEYTKEAHASLAKMYVSDERFTSYYDKEQPGTAKFLRATILIYT
DMKK
>gid:174053  virR  response regulator, putative virR
MYNVAICEDNSIHSNEIINLFNRYSDNENVKFNIDIFRTGEDFLTHEYSK
YDIIILDIQMNEINGIEVAKIIRKTNNYVKIVFITALEKYWPEGYNVNAF
RYILKPIDENTFYNEIKNLITDINKHKIFIPVKNNGNIKKILISSIKYLE
ISNRKVIIHTDSGNYISTYKLKYWNEKLSSFSFANPHSSFLVNMNYVMEM
DREKVTLLDGEYIYFSQRKFKDFKEKFIEFLAKL