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Gene list

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COG category: Transcription
Gene type: CDS
Genomic element: pHCM1

Number of genes found: 12

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# Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18

>gid:896388  HCM1.207c  hypothetical protein
MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSGQLHIKE
LYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQAL
GGRINDHIVNYYLHGESLSKLASGI
>gid:896479  HCM1.244c  putative transcriptional regulator
MANLIRKEVTFESSIAAIGAAMSDISRVKILSALMDGRAWTATELSSVAN
ISASTASSHLSKLLDCQLITVVAQGKHRYFRLAGKDIAELMESMMGISLN
HGVHARVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITL
SGIQYFHEMGIDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESK
GWLTRHLGYREVTITEKGYAAFKTHFHI
>gid:896486  HCM1.248  putative transcriptional regulator (partial)
MKLRHLDIFYAVMTCGSLTRAAEVLHISQPAASKALKHAEH
>gid:896076  HCM1.58c  putative DNA-binding protein
MSDLMTDSQQQTNSRVFKSPLVSFSTVTGSGRFVSGMKQFRDANPDLCNE
VTEQKAWAISPTVVQITEGFNSREMGMGEAYYQLPEVADHLNNIKNAYIR
GDYVDPIRVLIKDGIPYVRQGHCRLKAALMAVAEGHSNLTILCIEMKADE
ISCELTTIDGNRGLALSPVALGESYRRLQALGGWSLDRIAEREGKSNTTI
AALIRLTGCCVYLKKLIHADAISYVAVLSLIDEFGETEAVARIEKMIADL
EKADSSGIQIKKTPRGQIRVVPSDFKPARVPPVLATKAVEGVKLITTSLL
QKLGDIELPEVTDSSEDEEITFTLNRSMLEMLKNLQSEITESENKQLRRA
ENRQARLKGEKVTYKTKKNDKNGGEPQSETPPAQA
>gid:896087  HCM1.63c  hypothetical protein
MNHCDYQIIEISPKALFIESGFNPREAVIGELCYEQEPVKSTIVSIKQAY
KEGRRVDLIKVVKKDSNYVVRQGHCRYRALSLALAEGADIQLISVVVMNY
KNKSEEYLENLDGNRNNGLNPVALAYALAEALKLGSTVESLAMRYQRSST
AIRNQLKILDMPLELQRLISLNLIKKTLAIEIMLKYSNDHAKVLAHLESC
SLLVPSTEPEPVLSKTSSVQTSSNDEKLDNPETLPVHVIPKEVKTKSITR
SSLGIKRLSHKKTERLKTEFIGLIDTVRPALNDSNKLTELIFDGQHSNLF
TNISSTSITKTTESVKITLDEAKLQLLLSLLNDENTAIIIPKSKVTELHE
IRDLLTSE
>gid:896157  HCM1.87  putative plasmid partition protein
MSDEQHIGNDKSRYINAPKRTEVIHRSGLQGLKGQPRLKKLFTLHNGRKL
EAEHIIVPAEKVELETTVHPLNPRNQEALSVNAVRDILKDIEARGVDTEG
VAVKRNGVYLLIEGSRRRFCCIQSAKELPLWVLPDDVNADDINSIISATQ
TSRRFSYREVGLKYLREMEEHGFVTNEELANYHGISHVSVSKRVQAAKIN
STLIALFPDYEAIPNSYYNRLFRLQKYIEKNLFSLEEVVENTREEIRDLD
ISDIAEAQKTVMEKITTVVEKLDIKPPSKGWDTRELATFTNKDKYARISK
SSSGRKIRFEFNRMNRELIDEIEKFIKSKLSEMNN
>gid:896294  merD  putative mercuric resistance operon coregulator
MSAYTVSRLALDAGVSVHIVRDYLLRGLLRPVAYTTGGYGLFDDTALQRL
RFVRAAFEAGIGLDALARLCRALDAADGDGASAQLAVLRQLVERRREALA
SLEMQLAAMPTEPAQHAESLP
>gid:896440  merD  putative mercuric resistance operon coregulator
MSAYTVSQLAHNAGVSVHIVRDYLVRGLLRPVACTTGGYGVFDDAALQRL
CFVRAAFEAGIGLDALARLCRALDAADGAQAAAQLAVLRQLVERRRAALA
HLDAQLASMPAERAHEEALP
>gid:896456  merR  putative mercuric resistance operon regulatory protein
MENNLENLTIGVFAKAAGVNVETIRFYQRKGLLREPDKPYGSIRRYGEAD
VVRVKFVKSAQRLGFSLDEIAELLRLDDGTHCEEASSLAEHKLKDVREKM
ADLARMETVLSELVCACHARKGNVSCPLIASLQGEAGLARSAMP
>gid:896274  merR  putative mercuric resistance operon regulatory protein
MQINFENLTIGVFAKAAGVNVETIRFYQRKGLLPEPDKPYGSIRRYGEAD
VTRVRFVKSAQRLGFSLDEIAELLRLEDGTHCEEASGLAEHKLKDVREKM
ADLARMEAVLSELVCACHARKGNVFCPLIASLQDGTKLAASARGSHGVTT
P
>gid:896495  mucA  putative DNA-repair modulator
MSVFPERFASPPRDTTPFFSDLLSCGVMSPCAGHEDNELNLHDFVVRNRP
ATFFVRASGLSMVDAGINDGAILVVDRSLTAEHGSIVVALVDGEFTVKIL
QTFPKLMLMPSNPAFKPIPVNPDTLEIWGVVTFALNQFPHVHAR
>gid:896475  tetR  tetracycline repressor protein
MMSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWHVKNKR
ALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKV
HLGTRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQ
EHQVAKEERETPTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEK
QLKCESGS