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# Escherichia coli K12, K-12

>b1903 orf, hypothetical protein
MHCADEGFEKPLPHLFEAAVFLMGFTLWGKLEFNKRDGFLDCPHGDRVCG
GGMVSKVDILQLTGHFFTNFNGRDYIENIQNLFDNQLASNHIRNQFLIGI
QRLGHRKLLIAF
>b2450 orf, hypothetical protein
MDSMRWEIKIMSYEIKICDILKGAAMEGQYKGAQRGAKCEEIANELTRRG
VKNNKGEVITKGGVSHWLEGRREPNFDTLAELCDMFGVYALMPMRGGKWI
RVHPEDRGEMELREAVAERDAIIDDLKARIAELEAALANKQVPAEAEEMG
GEKVEEVAAEQAPNDEKEMGAKEWVNPNPKKYSVGMLCQVLAAMGGEYLG
NNAGLQQKITVLDNDGNRKPISNGAFYRLIEQAKGRGLISVEQEIKHKKD
ENGNQIGKGKKGDKLITLLPNWIDKLGDE
>b2856 orf, hypothetical protein
MGKIKIVVSDQQPFMIDGIIGFLGHYPDLYEVVGGYKDLKKAIAECNKST
A
>b1506 orf, hypothetical protein
MSPLRYQKWLRLNEVRRQMLNEHYDVTTAAYAVGYESYPISVGNIRGCLE
SHPREILPG
>b2667 orf, hypothetical protein
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGL
SASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP
>b1339 abgR, putative transcriptional regulator LYSR-type
MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELEEGLAAQ
LFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIG
MGASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTIN
TYYQGPYDHEFTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTP
HGSYYKQLSELLDDQAQTPQVGVVCETFSACISLVAKSDFLSKLPEEMGC
DPLHGQGLVMLPVSEILPKAAYYLIQRRDSRQTPLTASLITQFRRECGYL
QS
>b0464 acrR, acrAB operon repressor
MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYW
HFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLEST
VTEERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIE
AKMLPADLMTRRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLE
MYLLCPTLRNPATNE
>b4116 adiY, putative ARAC-type regulatory protein
MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNIIDVSSL
NNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRV
AAQHSMMPAETESEKERTRALLFTVLSRFLDSKKFVSLMMYMLRNCVSDS
VYQIIESDIHKDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMR
YAVNELMMDGKNISQVSQSCGYNSTSYFISVFKDFYGMTPLHYVSQHRER
TVA
>b3131 agaR, putative DEOR-type transcriptional regulator of aga operon
MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRN
DLAFLEKQGIAVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAA
VELIQPGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLEAEGV
ELLMTGGHLRRQSQSFYGDQAEQSLQNYHFDMLFLGVDAIDLERGVSTHN
EDEARLNRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRIDMIIVDEGIP
ADSLEGLRKAGVEVILVGE
>b0506 allR, repressor of allantoin and glyoxylate utilization operons
MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNL
DLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLS
VAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLP
LHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQAR
ELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQ
GELVRDTARDISTALGLKAHP
>b2624 alpA, prophage CP4-57 regulatory protein alpA
MNNRSAVRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVK
SVGWIEAEIDEWLSQRCKLI
>b4084 alsK, D-allose kinase
MQKQHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRTAEVIAPGLVSGIG
EMIDEQLRRFNARCHGLVMGFPALVSKDKRTIISTPNLPLTAADLYDLAD
KLENTLNCPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMN
GAPWTGAHGVAGELGHIPLGDMTQHCACGNPGCLETNCSGMALRRWYEQQ
PRNYPLRDLFVHAENAPFVQSLLENAARAIATSINLFDPDAVILGGGVMD
MPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRF
LPQFCAKAP
>b0564 appY, regulatory protein affecting appA and other genes
MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVCPSKLRI
VDIDKKTCLSFFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKI
ADSHSLWLKERLCISLLAMFKKRESVNSFILTNINTFTCKITGIISFNIE
RQWHLKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNS
YSINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEKIIGVTDGINKTID
>b0064 araC, transcriptional regulator for ara operon
MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKGYILNLT
IRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRP
RAYWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSEL
LAINLLEQLLLRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASV
AQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVG
RNVGFDDQLYFSRVFKKCTGASPSEFRAGCEEKVNDVAVKLS
>b4401 arcA, negative response regulator of genes in aerobic pathways, (sensors, ArcB and CpxA)
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINL
VIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDY
ITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRS
LIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRT
VDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED
>b3237 argR, repressor of arg regulon; cer-mediated site specific recombination
MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRML
TKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHT
SPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILE
LFDQEL
>b3501 arsR, transcriptional repressor of chromosomal ars operon
MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQPKISRH
LALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKVQAIV
RNLARQNCSGDSKNICS
>b2714 ascG, ascBF operon repressor
MMTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESGYRPNL
LARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADG
KHSAEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNR
RLRKNSSHSVWCDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLA
GYKDALAQHGIALNEKLIANGKWTPASGAEGVEMLLERGAKFSALVASND
DMAIGAMKALHERGVAVPEQVSVIGFDDIAIAPYTVPALSSVKIPVTEMI
QEIIGRLIFMLDGGDFSPPKTFSGKLIRRDSLIAPSR
>b3743 asnC, regulator for asnA, asnC and gidA
MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAG
IITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYY
TTGHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTI
KP
>b2079 baeR, transcriptional response regulatory protein (sensor BaeS)
MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGDQVLPYV
RQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGL
EIGADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRF
QASWRGKMLDLTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRT
IDSHIKNLRRKLESLDAEQSFIRAVYGVGYRWEADACRIV
>b4113 basR, transcriptional regulatory protein, member of 2-component regulatory system,
MKILIVEDDTLLLQGLILAAQTEGYACDSVTTARMAEQSLEAGHYSLVVL
DLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLV
KPFALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELIL
TPKEYALLSRLMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDK
VGKARIRTVRGFGYMLVANEEN
>b0313 betI, probably transcriptional repressor of bet genes
MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYF
RDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAEQRLQAIVGGNFDETQ
VSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPREQA
QEAGYGLAALIDGLWLRAALSGKPLDKTRANSLTRHFITQHLPTD
>b3723 bglG, positive regulation of bgl operon
MNMQITKILNNNVVVVIDDQQREKVVMGRGIGFQKRAGERINSSGIEKEY
ALSSHELNGRLSELLSHIPLEVMATCDRIISLAQERLGKLQDSIYISLTD
HCQFAIKRFQQNVLLPNPLLWDIQRLYPKEFQLGEEALTIIDKRLGVQLP
KDEVGFIAMHLVSAQMSGNMEDVAGVTQLMREMLQLIKFQFSLNYQEESL
SYQRLVTHLKFLSWRILEHASINDSDESLQQAVKQNYPQAWQCAERIAIF
IGLQYQRKISPAEIMFLAINIERVRKEH
>b4366 bglJ, 2-component transcriptional regulator
MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDA
MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEAR
LIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQS
RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD
AGLLEAADILLCMRHCETSNVLHPY
>b4133 cadC, transcriptional activator of cad operon
MQQPVVRVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSR
DELIDNVWKRSIVTNHVVTQSISELRKSLKDNDEDSPVYIATVPKRGYKL
MVPVIWYSEEEGEEIMLSSPPPIPEAVPATDSPSHSLNIQNTATPPEQSP
VKSKRFTTFWVWFFFLLSLGICVALVAFSSLDTRLPMSKSRILLNPRDID
INMVNKSCNSWSSPYQLSYAIGVGDLVATSLNTFSTFMVHDKINYNIDEP
SSSGKTLSIAFVNQRQYRAQQCFMSIKLVDNADGSTMLDKRYVITNGNQL
AIQNDLLESLSKALNQPWPQRMQETLQKILPHRGALLTNFYQAHDYLLHG
DDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAAL
NTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSW
LNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGIFQTSVPY
VVPYLDKFLASE
>b1987 cbl, transcriptional regulator cys regulon; accessory regulatory circuit affecting cysM
MNFQQLKIIREAARQDYNLTEVANMLFTSQSGVSRHIRELEDELGIEIFV
RRGKRLLGMTEPGKALLVIAERILNEASNVRRLADLFTNDTSGVLTIATT
HTQARYSLPEVIKAFRELFPEVRLELIQGTPQEIATLLQNGEADIGIASE
RLSNDPQLVAFPWFRWHHSLLVPHDHPLTQISPLTLESIAKWPLITYRQG
ITGRSRIDDAFARKGLLADIVLSAQDSDVIKTYVALGLGIGLVAEQSSGE
QEEENLIRLDTRHLFDANTVWLGLKRGQLQRNYVWRFLELCNAGLSVEDI
KRQVMESSEEEIDYQI
>b0162 cdaR, regulator of D-galactarate, D-glucarate and D-glycerate metabolism
MHNGGLMAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI
GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGL
TGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEE
NTPALTEWAQRLGIDLNQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTT
PERNNLVAIVSLTEMVVLKPALNSFGRWDAEDHRKRVEQLITRMKEYGQL
RFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQRMPESRCYFYQDLMLPVL
LDSLRGDWQANELARPLARLKTMDNNGLLRRTLAAWFRHNVQPLATSKAL
FIHRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER
>b1735 celD, negative transcriptional regulator of cel operon
MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLV
LTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRF
FEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMV
TFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSA
KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGY
SSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ
>b0620 citB, sequence similarity to Shigella regulator
MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFK
PGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCG
VFDYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGE
PKDELPTGIDPLTLNAVRKLFKEPGVQHTAETVAQALTISRTTARRYLEY
CASRHLIIAEIVHGKVGRPQRIYHSG
>b1120 cobB, putative nicotinic acid mononucleotide:5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase
MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVLVLTGAG
ISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQ
QPEIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGEL
LKVRCSQSGQVLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEI
YMALSMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQVGNEF
AEKYYGPASQVVPEFVEKLLKGLKAGSIA
>b3912 cpxR, transcriptional regulator in 2-component system
MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDSIDLLLL
DVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPK
PFNDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASF
DGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMH
ISNLRRKLPDRKDGHPWFKTLRGRGYLMVSAS
>b4398 creB, catabolic regulation response regulator
MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKARKQVPDV
MILDVGLPDISGFELCRQLLALHPALPVLFLTARSEEVDRLLGLEIGADD
YVAKPFSPREVCARVRTLLRRVKKFSTPSPVIRIGHFELNEPAAQISWFD
TPLALTRYEFLLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIK
TLRAKLRAINPDLSPINTHRGMGYSLRGL
>b1040 csgD, putative 2-component transcriptional regulator for 2nd curli operon
MFNEVHSIHGHTLLLITKSSLQATALLQHLKQSLAITGKLHNIQRSLDDI
SSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIEN
WPHINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNS
TESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAV
KNRTQAVSWANDNLRR
>b2535 csiE, stationary phase inducible protein
MLMGDLQMMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVD
DDIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRR
GFRLCPSFITSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKR
FESRDIHFLCLYLQYCLLQHHAGITPQFNPLQRRWAESCLEFQVAQEIGR
HWQRRALQPVPPDEPLFMALLFSMLRVPDPLRDAHQRDRQLRQSIKRLVN
HFRELGNVRFYDEQGLCDQLYTHLAQALNRSLFAIGIDNTLPEEFARLYP
RLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQENDLHEKQIIL
LTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAPY
TMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA
>b3556 cspA, cold shock protein 7.4, transcriptional activator of hns
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQK
VSFTIESGAKGPAAGNVTSL
>b1557 cspB, cold shock-like protein
MSNKMTGLVKWFNADKGFGFISPVDGSKDVFVHFSAIQNDNYRTLFEGQK
VTFSIESGAKGPAAANVIITD
>b1823 cspC, cold shock protein
MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTLAEGQNV
EFEIQDGQKGPAAVNVTAI
>b0880 cspD, stress induced DNA replication inhibitor.
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQF
DVHQGPKGNHASVIVPVEVEAAVA
>b0623 cspE, cold shock protein
MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRV
EFEITNGAKGPSAANVIAL
>b1558 cspF, cold shock-like protein
MSRKMTGIVKTFDGKSGKGLITPSDGRIDVQLHVSALNLRDAEEITTGLR
VEFCRINGLRGPSAANVYLS
>b0990 cspG, homolog of Salmonella cold shock protein
MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQK
VEFSIEQGQRGPAAANVVTL
>b0989 cspH, cold shock-like protein
MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEVLIPGLR
VEFCRVNGLRGPTAANVYLS
>b1552 cspI, cold shock-like protein
MSNKMTGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFKTLTENQE
VEFGIENGPKGPAAVHVVAL
>b0487 cueR, copper responsive transcription regulator
MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLL
RQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQS
MRDQLLALANACPGDDSADCPIIENLSGCCHHRAG
>b0571 cusR, response regulator of copper sensing system
MKLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMTGDYDLIIL
DIMLPDVNGWDIVRMLRSANKGMPILLLTALGTIEHRVKGLELGADDYLV
KPFAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRIT
LTSKEFTLLEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRG
KIDNDFEPKLIQTVRGVGYMLEVPDGQ
>b0338 cynR, cyn operon positive regulator
MLSRHINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDR
SGRTIRLTDAGEVWRQYASRALQELGAGKRAIHDVADLTRGSLRIAVTPT
FTSYFIGPLMADFYARYPSITLQLQEMSQEKIEDMLCRDELDVGIAFAPV
HSPELEAIPLLTESLALVVAQHHPLAVHEQVALSRLHDEKLVLLSAEFAT
REQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSLSTLLPAAIATQHDG
LKAISLAPPLLERTAVLLRRKNSWQTAAAKAFLHMALDKCAVVGGNESR
>b1275 cysB, positive transcriptional regulator for cysteine regulon
MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDELGIQIFS
RSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATT
HTQARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATE
ALHLYEDLVMLPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFG
FTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDP
VADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTRDVV
DAAVALRSNEEIEVMFKDIKLPEK
>b3934 cytR, regulator for deo operon, udp, cdd, tsx, nupC, and nupG
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAARE
VGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLV
LIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMV
MANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCH
YRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAVF
CHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPR
YEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIRGSTRALP
>b1343 dbpA, ATP-dependent RNA helicase
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTG
SGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPN
TKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTL
VMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQR
DPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVVFCNT
KKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEA
QRANIISDMLQIKLNWQTPPANSSIATLEAEMATLCIDGGKKAKMRPGDV
LGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT
CRVRLLK
>b4124 dcuR, response regulator of fumarate two-component regulatory system
MINVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPI
DLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGV
VDYLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQ
DPRRLPKGLTPQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLI
WLVNCHILFTSIHYGVTGRPVYRYRIQAEHYSLLKQYCQ
>b3162 deaD, inducible ATP-independent RNA helicase
MMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALNDLGYEKPSPIQ
AECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPT
RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTP
GRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQT
ALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKN
EALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQAL
REQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRI
GRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRR
LEKFAAKVQQQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQ
GERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREDRPRRERRDV
GDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGFGGERR
EGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRRFGGDA
>b0840 deoR, transcriptional repressor for deo operon, tsx, nupG
METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNNHSAPVV
LLGGYIVLEPRSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDC
GTTTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNA
IFKPIDFQQTLNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMA
QKHVLVVDHSKFGKVRPARMGDLKRFDIVVSDCCPEDEYVKYAQTQRIKL
MY
>b4479 dgoR, transcriptional repressor for galactonate utilization (GntR family)
MTLNKTDRIVITLGKQIVHGKYVPGSPLPAEAELCEEFATSRNIIREVFR
SLMAKRLIEMKRYRGAFVAPRNQWNYLDTDVLQWVLENDYDPRLISAMSE
VRNLVEPAIARWAAERATSSDLAQIESALNEMIANNQDREAFNEADIRYH
EAVLQSVHNPVLQQLSIAISSLQRAVFERTWMGDEANMPQTLQEHKALFD
AIRHQDGDAAEQAALTMIASSTRRLKEIT
>b1570 dicA, regulator of dicB
METKNLTIGERIRYRRKNLKHTQRSLAKALKISHVSVSQWERGDSEPTGK
NLFALSKVLQCSPTWILFGDEDKQPTPPVEKPVALSPKELELLELFNALP
ESEQDTQLAEMRARVKNFNKLFEELLKARQRTNKR
>b0799 dinG, probably ATP-dependent helicase
MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHL
AIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLL
KKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQ
EEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCY
YYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEG
HHLPDVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAI
PERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQ
RLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQS
KLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR
SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKI
VIPRMRVEPSIDNEEQHIAEMAAFFRKQVESKKHLGMLVLFASGRAMQRF
LDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDL
KGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNL
IQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVFPIEQPEVPEG
IVKKKEKTKSPRRRRR
>b2364 dsdC, D-serine dehydratase (deaminase) transcriptional activator
MEPLREIRNRLLNGWQLSKMHTFEVAARHQSFALAAEELSLSPSAVSHRI
NQLEEELGIQLFVRSHRKVELTHEGKRVYWALKSSLDTLNQEILDIKNQE
LSGTLTLYSRPSIAQCWLVPALGDFTRRYPSISLTVLTGNDNVNLQRAGI
DLAIYFDDAPSAQLTHHFLMDEEILPVCSPEYAQRHALTNTVINLCHCTL
LHDRQAWSNDSGTDEWHSWAQHYAVNLPTSSGIGFDRSDLAVIAAMNHIG
VAMGRKRLVQKRLASGELVAPFGDMTVKCHQHYYITTLPGRQWPKIEAFI
IWLREQVKTTS
>b3075 ebgR, regulator of ebg operon
MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTS
SARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIEL
TNCYEHSGLPDIKNVTGILIVGKPTPALRAAASALTDNICFIDFHEPGSG
YDAVDIDLARISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYG
RLKQVVREEDIWRGGFSSSSGYELAKQMLAREDYPKALFVASDSIAIGVL
RAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLV
YEKARDGRALPLLVFVPSKLKLRGTTR
>b2684 emrR, regulator of plasmid mcrB operon (microcin B17 synthesis)
MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENRNKMLKA
QGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGW
IERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQ
LEQITRKLLSRLDQMEQDGVVLEAMS
>b3264 envR, putative transcriptional regulator
MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYW
HFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYI
AKIPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQ
GCVANNLDLDVVMIIIDGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRM
FMPDENITKLIHQTNELSVM
>b0566 envY, envelope protein; thermoregulation of porin biosynthesis
MQLSSSEPCVVILTEKEVEVSVNNHATFTLPKNYLAAFACNNNVIELSTL
NHVLITHINRNIINDYLLFLNKNLTCVKPWSRLATPVIACHSRTPEVFRL
AANHSKQQPSRPCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDS
VCRIIQSDIQHYWNLRIVASSLCLSPSLLKKKLKNENTSYSQIVTECRMR
YAVQMLLMDNKNITQVAQLCGYSSTSYFISVFKAFYGLTPLNYLAKQRQK
VMW
>b2369 evgA, putative positive transcription regulator (sensor EvgS)
MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVI
IDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFV
SKKEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEIS
VMRYILDGKDNNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQR
NKIG
>b3094 exuR, negative regulator of exu regulon, exuT, uxaAC, and uxuB
MPGAHMEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNVS
RTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPF
ELLQARQLIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQ
FHIQVALATQNSALAAIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDH
DQILKALIRKDPHAAKLAMWQHLENTKIMLFNETSDDFEFNADRYLFAEN
PVVHLDTATSGSK
>b1187 fadR, negative regulator for fad regulon, and positive activator of fabA
MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLRE
VLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDN
LLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFR
GLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALC
SEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAIQGR
>b0730 farR, transcriptional regulator of succinylCoA synthetase operon
MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQAL
RQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVL
IFEVIPADDFLQQQLQITPQDRVWHVKRVRYRKQKPMALEETWMPLALFP
DLTWQVMENSKYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKP
ILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR
>b1384 feaR, regulatory protein for 2-phenylethylamine catabolism
MNPAVDNEFQQWLSQINQVCGNFTGRLLTERYTGVLDTHFAKGLKLSTVT
TSGVNLSRTWQEVKGSDDAWFYTVFQLSGQAIMEQDERQVQIGAGDITLL
DASRPCSLYWQESSKQISLLLPRTLLEQYFPHQKPICAERLDADLPMVQL
SHRLLQESMNNPALSETESEAALQAMVCLLRPVLHQRESVQPRRERQFQK
VVTLIDDNIREEILRPEWIAGETGMSVRSLYRMFADKGLVVAQYIRNRRL
DFCADAIRHAADDEKLAGIGFHWGFSDQSHFSTVFKQRFGMTPGEYRRKF
R
>b4293 fecI, probable RNA polymerase sigma factor
MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVM
VSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPS
PEERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSI
SSVKKYVAKAVEHCLLFRLEYGL
>b2731 fhlA, formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons
MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALADNAAIV
LWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRSILSRPDTLHCSYEE
FCETWPQLDAGGLYPKFGHYCLMPLAAEGHIFGGCEFIRYDDRPWSEKEF
NRLQTFTQIVSVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSR
LDMDELVSEVAKEIHYYFDIDDISIVLRSHRKNKLNIYSTHYLDKQHPAH
EQSEVDEAGTLTERVFKSKEMLLINLHERDDLAPYERMLFDTWGNQIQTL
CLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLRQIAERVAIAVDNALAY
QEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVLKQVEMVAQ
SDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDL
FGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQ
EFERLGSNKIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLP
PLRERPEDIPLLAKAFTFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRE
LENVIERAVLLTRGNVLQLSLPDIVLPEPETPPAATVVALEGEDEYQLIV
RVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKSALI
>b0535 fimZ, fimbrial Z protein; probable signal transducer
MKPTSVIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRPV
DLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGA
NGFVSKCNDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVL
SNREVTILRYLVSGLSNKEIADKLLLSNKTVSAHKSNIYGKLGLHSIVEL
IDYAKLYELI
>b3261 fis, site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDL
YELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
>b1071 flgM, anti-FliA (anti-sigma) factor; also known as RflB protein
MSIDRTSPLKPVSTVQPRETTDAPVTNSRAAKTTASTSTSVTLSDAQAKL
MQPGSSDINLERVEALKLAIRNGELKMDTGKIADALINEAQQDLQSN
>b1922 fliA, flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGI
GLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREV
AQAIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWR
EEHGDSIELVTDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLY
YQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
>b0080 fruR, transcriptional repressor of fru operon and others
MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPN
AVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSE
DQPDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRA
LDREHFTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQG
FRTAWKDDPREVHFLYANSYEREAAAQLFEKWLETHPMPQALFTTSFALL
QGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQCPVLAVAQRHRDVAERV
LEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
>b2805 fucR, positive regulator of the fuc operon
MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILR
NHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALD
ASSTCWYLARQLPDINIQVFTNSHPICHELGKRERIQLISSGGTLERKYG
CYVNPSLISQLKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRA
AQSLLLIDKSKFNRSGEARIGHLDEVTHIISDERQVATSLVTA
>b3516 gadX, putative ARAC-type regulatory protein
MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRVDKCVEN
FVFVSRDTLSLFLPMLKEEALNLHAHKKVSSLLVHHCSRDIPVFQEVAQL
SQNKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTV
INNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQ
LIVIHGFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQRLSNR
DSAASIVAQGNFYGTDRSAEGIRL
>b2837 galR, repressor of galETK operon
MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLSYHPNAN
ARALAQQTTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHN
EQKERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPG
FENRCIALDDRYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYD
ALAESGIAANDRLVTFGEPDESGGEQAMTELLGRGRNFTAVACYNDSMAA
GAMGVLNDNGIDVPGEISLIGFDDVLVSRYVRPRLTTVRYPIVTMATQAA
ELALALADNRPLPEITNVFSPTLVRRHSVSTPSLEASHHATSD
>b2151 galS, mgl repressor, galactose operon inducer
MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELDYRPNAN
AQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHE
AEKERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPG
YAHRCVCLDNLSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMS
ALKEQDIIPPESWIGAGTPDMPGGEAAMVELLGRNLQLTAVFAYNDNMAA
GALTALKDNGIAIPLHLSIIGFDDIPIARYTDPQLTTVRYPIASMAKLAT
ELALQGAAGNIDPRASHCFMPTLVRRHSVATRQNAAAITNSTNQAM
>b2808 gcvA, positive regulator of gcv operon
MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGL
KLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSL
LPSFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRG
NWPGLRVEKLYAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDW
QTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALANNVMAQSEIEA
GRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILAKAAAEQEKFR
FRYEQ
>b2980 glcC, transcriptional activator for glc operon
MKDERRPICEVVAESIERLIIDGVLKVGQPLPSERRLCEKLGFSRSALRE
GLTVLRGRGIIETAQGRDSRVARLNRVQDTSPLIHLFSTQPRTLYDLLDV
RALLEGESARLAATLGTQADFVVITRCYEKMLAASENNKEISLIEHAQLD
HAFHLAICQASHNQVLVFTLQSLTDLMFNSVFASVNNLYHRPQQKKQIDR
QHARIYNAVLQRLPHVAQRAARDHVRTVKKNLHDIELEGHHLIRSAVPLE
MNLS
>b3423 glpR, repressor of the glp operon
MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELAEQNLIL
RHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIG
TTPEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGG
IIGEATLDFISQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSR
HVMLVVDHSKFGRNAMVNMGSISMVDAVYTDAPPPVSVMQVLTDHHIQLE
LC
>b3438 gntR, regulator of gluconate (gnt) operon
MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYI
PNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAH
YGYKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMD
SKSPCLDIAVGFDNFEAARQMTTAIIARGHRHIAYLGARLDERTIIKQKG
YEQAMLDAGLVPYSVMVEQSSSYSSGIELIRQARREYPQLDGVFCTNDDL
AVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSI
GAERLLARIRGESVTPKMLDLGFTLSPGGSI
>b3181 greA, transcription elongation factor: cleaves 3' nucleotide of paused mRNA
MTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKENAEYHAAREQQ
GFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTY
RIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKV
EYL
>b3406 greB, transcription elongation factor and transcript cleavage
MRIIKQTKGINEMKTPLVTREGYEKLKQELNYLWREERPEVTKKVTWAAS
LGDRSENADYQYNKKRLREIDRRVRYLTKCLENLKIVDYSPQQEGKVFFG
AWVEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAV
VNTPAGEASWYVNAIEYVKP
>b2706 gutM, glucitol operon activator
MVSALITVAVIAWCAQLALGGWQISRFNRAFDTLCQQGRVGVGRSSGRFK
PRVVVAIALDDQQRIVDTLFMKGLTVFARPQKIPAITGMHAGDLQPDVIF
PHDPLSQNALSLALKLKRG
>b2537 hcaR, transcriptional activator of hca cluster
MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVR
DKRKVALTAAGECFLQDALAILEQAENAKLRARKIVQEDRQLTIGFVPSA
EVNLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVY
SPEIDYLELFDEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPVYSGS
LAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTLIPGYMNNFNT
GQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFIAIVQERLASVTA
>b4480 hdfR, transcriptional regulator of the flhDC operon
MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTR
HRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLW
ECMLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEA
PKMDEFSSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIG
ADEVPILTTSSAELAQQQIAMLNGCTWLPVSWARKKGGLHTVVDSTTLSR
PLYAIWLQNSDKNALIRDLLKINVLDEVY
>b0059 hepA, probable ATP-dependent RNA helicase
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPV
TRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREV
FLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQ
RTSLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA
ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQ
LVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYR
PVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSAR
QELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTS
HRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF
AEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDL
INYLASPDQTEGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ
ALAESIEEQDDDTNLIAFAMNLFDIIGINQDDRGDNMIVLTPSDHMLVPD
FPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGSST
ISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGN
NLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR
ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESL
DQAGWRLDALRLIVVTHQ
>b1508 hipB, persistence to inhibition of murein or DNA biosynthesis; regulatory protein
MMSFQKIYSPTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNPD
NTTLTTFFKILQSLELSMTLCDAKNASPESTEQQNLEW
>b2491 hyfR, putative 2-component regulator, interaction with sigma 54
MFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPLPPPFSPVQLIELH
VLKSNFYYRYHDDGSDVTATTEYQGEMVDYSRHAVLLGSSGMAELRFIRT
HGSRFTSQDCTLFNWLARIITPVLQSWLNDEEQQVALRLLEKDRDHHRVL
VDITNAVLSHLDLDDLIADVAREIHHFFGLASVSMVLGDHRKNEKFSLWC
SDLSASHCACLPRCMPGESVLLTQTLQTRQPTLTHRADDLFLWQRDPLLL
LLASNGCESALLIPLTFGNHTPGALLLAHTSSTLFSEENCQLLQHIADRI
AIAVGNADAWRSMTDLQESLQQENHQLSEQLLSNLGIGDIIYQSQAMEDL
LQQVDIVAKSDSTVLICGETGTGKEVIARAIHQLSPRRDKPLVKINCAAI
PASLLESELFGHDKGAFTGAINTHRGRFEIADGGTLFLDEIGDLPLELQP
KLLRVLQEREIERLGGSRTIPVNVRVIAATNRDLWQMVEDRQFRSDLFYR
LNVFPLELPPLRDRPEDIPLLAKHFTQKMARHMNRAIDAIPTEALRQLMS
WDWPGNVRELENVIERAVLLTRGNSLNLHLNVRQSRLLPTLNEDSALRSS
MAQLLHPTTPENDEEERQRIVQVLRETNGIVAGPRGAATRLGMKRTTLLS
RMQRLGISVREVL
>b2727 hypB, guanine-nucleotide binding protein, functions as nickel donor for large subunit of hydrogenase 3
MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIKAPEFTP
SQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFA
ARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARI
RATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPA
SFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDV
EKCIACAREVNPEIEIILISATSGEGMDQWLNWLETQRCA
>b2916 iciA, replication initiation inhibitor, binds to 13-mers at oriC
MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPL
LVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNAD
SLATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQA
LPSCLVDKLGALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDM
HQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPHLQIEKELA
SGELIDLTPGLFQRRMLYWHRFAPESRMMRKVTDALLDYGHKVLRQD
>b4018 iclR, repressor of aceBA operon
MKMISTIQKKETVMVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWI
AESNGSVALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAH
AFMVGSSFLQSRNLLAIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQ
VQCTHLMRMSAPIGGKLPMHASGAGKAFLAQLSEEQVTKLLHRKGLHAYT
HATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAA
ISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR
>b4264 idnR, L-idonate transcriptional regulator
MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYI
PNRAPGMLLNAQSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIAN
YNYDRDSEEESVINLLSYNIDGIILSEKYHTIRTVKFLRSATIPVVELMD
VQGERLDMEVGFDNRQAAFDMVCTMLEKRVRHKILYLGSKDDTRDEQRYQ
GYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPDLDGVFCTNDD
IAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGR
MAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL
>b3773 ilvY, positive regulator for ilvC
MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVR
DNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVT
AAYSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPE
TLPGAVAFSMLENLAVVLIAPALPCPVRNQVSVEKPDWSTVPFIMADQGP
VRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVALLPEVVLENS
PEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIEAFWKILPNHK
>b2531 iscR, Fe-S cluster-containing transcription factor
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLR
KNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQG
GDKCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRT
RTQDAIDVKLRA
>b1827 kdgR, regulator of kdgK, kdgT, and eda
MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYR
FLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREL
SRLTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKV
LLAWRDRDEVKQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNE
EQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFSEERLQEYVAMLHTAAR
KISAQMGYHDYPF
>b0694 kdpE, regulator of kdp operon (transcriptional effector)
MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLII
LDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLS
KPFGIGELQARLRVALRRHSATTAPDPLVKFSDVTVDLAARVIHRGEEEV
HLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLR
QKLEQDPARPRHFITETGIGYRFML
>b0345 lacI, transcriptional repressor of the lac operon
MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPN
RVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVE
RSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDV
SDQTPINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAG
WHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPTAMLVANDQMA
LGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQTS
VDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLA
RQVSRLESGQ
>b0076 leuO, probable transcriptional activator for leuABCD operon
MTHSTAMDSVFIRTRIFMFSEFYSFCFFLFYMHDKSYSSGLFLCIPIRER
ELSVTVELSMPEVQTDHPETAELSKPQLRMVDLNLLTVFDAVMQEQNITR
AAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQ
ALQLVQNELPGSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNI
HVMFKSSLNQNTEHQLRYQETEFVISYEDFHRPEFTSVPLFKDEMVLVAS
KNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQGM
AMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSW
HEAAGRDKGHQWMEEQLVSICKR
>b4043 lexA, regulator for SOS(lexA) regulon
MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKAL
ARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQV
DPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARID
DEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGD
WL
>b3604 lldR, transcriptional regulator
MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLRE
ALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFD
ILEARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRF
HLAIAEASHNIVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQ
AVIDAIFAGDADGARKAMMAHLSFVHTTMKRFDEDQARHARITRLPGEHN
EHSREKNA
>b2289 lrhA, NADH dehydrogenase transcriptional regulator, LysR family; modulates SprE(RssB) activity
MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQQMQRLE
QLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGV
LTIGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVD
LMVTTHRPSAFKALNLRTSPTHWYCAAEYILQKGEPIPLVLLDDPSPFRD
MVLATLNKADIPWRLAYVASTLPAVRAAVKAGLGVTARPVEMMSPDLRVL
SGVDGLPPLPDTEYLLCYDPSSNNELAQVIYQAMESYHNPWQYSPMSAPE
GDDSLLIERDIE
>b0889 lrp, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVR
RLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKL
EEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVM
EEVKQSNRLVIKTR
>b2839 lysR, positive regulator for lys
MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEKVIGLKL
FERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIAC
LPVFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTE
TLHTPAGTERTELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRT
DSYRQLLDQLFTEHQVKRRMIVETHSAASVCAMVRAGVGISVVNPLTALD
YAASGLVVRRFSIAVPFTVSLIRPLHRPSSALVQAFSGHLQAGLPKLVTS
LDAILSSATTA
>b1620 malI, maltose regulon regulatory protein
MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAAIEELGF
VRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLL
HGGKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFA
SRASYLDDVDTVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAER
VGGYCATLLKFGLPFHSDWVLECTSSQKQAAEAITALLRHNPTISAVVCY
NETIAMGAWFGLLKAGRQSGESGVDRYFEQQVSLAAFTDATPTTLDDIPV
TWASTPARELGITLADRMMQKITHEETHSRNLIIPARLIAAK
>b3418 malT, positive regulator of mal regulon
MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYGKTTLIS
QWAAGKNDIGWYSLDEGDNQQERFASYLIAAVQQATNGHCAICETMAQKR
QYASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQP
ENLTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLS
SPIEAAESSRICDDVSGWATALQLIALSARQNTHSAHKSARRLAGINASH
LSDYLVDEVLDNVDLATRHFLLKSAILRSMNDALITRVTGEENGQMRLEE
IERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQWELAAELPEIHRAAAES
WMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSLLEESLKAL
PWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREDTMHAE
FNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHC
KGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWET
QEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL
SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWIS
NANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQIL
LGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRV
LLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRILR
EINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSG
YSNEQIAGELEVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYG
V
>b1531 marA, multiple antibiotic resistance; transcriptional activator of defense systems
MTMSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKK
ETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKN
YFDVPPHKYRMTNMQGESRFLHPLNHYNS
>b1530 marR, multiple antibiotic resistance protein; repressor of mar operon
MVNQKKDRLLNEYLSPLDITAAQFKVLCSIRCAACITPVELKKVLSVDLG
ALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAICEQCHQLVGQDL
HQELTKNLTADEVATLEYLLKKVLP
>b4118 melR, regulator of melibiose operon
MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWHGQVEVN
VPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPM
HLFLSWPLDKDLINHVTHGMVIKSLATQQLSPFEVRRWQQELNSPNEQIR
QLAIDEIGLMLKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFI
AENYDQALTINDVAEHVKLNANYAMGIFQRVMQLTMKQYITAMRINHVRA
LLSDTDKSILDIALTAGFRSSSRFYSTFGKYVGMSPQQYRKLSQQRRQTF
PG
>b3938 metJ, repressor of all met genes but metF
MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRQVNNLR
HATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINP
ETWEY
>b3828 metR, regulator for metE and metH
MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFV
RKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSC
IQWLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPR
SGLHYSPMFDYEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLD
VWRHFLQPAGVSPSLKSVDNTLLLIQMVAARMGIAALPHWVVESFERQGL
VVTKTLGEGLWSRLYAAVRDGEQRQPVTEAFIRSARNHACDHLPFVKSAE
RPTYDAPTVRPGSPARL
>b1114 mfd, transcription-repair coupling factor; mutation frequency decline
MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQ
NALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPT
MQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGY
RHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQ
RTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSK
GTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTL
ARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAAN
ANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGE
LLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL
GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLE
AGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAW
SRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFE
TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHK
QVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVA
EGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVD
ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVVRE
AILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMREREL
ERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR
GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDL
EIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQ
QTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRF
GLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPAWL
IGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENAIA
>b0346 mhpR, transcriptional regulator for mhp operon
MIFYCALSIGRVFSATIKTCPNVHQVHHVVLTIEMSINMQNNEQTEYKTV
RGLTRGLMLLNMLNKLDGGASVGLLAELSGLHRTTVRRLLETLQEEGYVR
RSPSDDSFRLTIKVRQLSEGFRDEQWISALAAPLLGDLLREVVWPTDVST
LDVDAMVVRETTHRFSRLSFHRAMVGRRLPLLKTASGLTWLAFCPEQDRK
ELIEMLASRPGDDYQLAREPLKLEAILARARKEGYGQNYRGWDQEEKIAS
IAVPLRSEQRVIGCLNLVYMASAMTIEQAAEKHLPALQRVAKQIEEGVES
QAILVAGRRSGMHLR
>b1594 mlc, putative NAGC-like transcriptional regulator
MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKI
VREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLA
LRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIA
ITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWT
MAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQV
DPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSL
CQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADI
LFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLL
IRLLQG
>b0817 mntR, transcriptional regulator MntR
MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIR
EVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEK
LAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQ
KHGAK
>b3601 mtlR, repressor for mtl
MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRSFLITAV
ELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLG
VINRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPP
PQFEPADSSLYAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK
>b1988 nac, nitrogen assimilation control protein
MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIR
TKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPG
TAASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEH
SPVAGVSSQALLKEDLFLVGTQDCPGQSVDVNAIAQMNLFLPSDYSAIRL
RVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPESAARSLCGAV
NGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVISSPVMEKRQ
WQLVS
>b0676 nagC, transcriptional repressor of nag (N-acetylglucosamine) operon
MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQLAPASVT
KITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATI
TLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAI
SVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLA
LAEHYFGASQDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGHIQV
EPLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDCTIKTI
CKAANKGDSLASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKV
LLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKRAMLNGILL
QHLLEN
>b3222 nanK, ManNAc kinase
MVQHSDEKGGAMTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPE
ALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNLGGLLHFPLV
KTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVS
GCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQG
ELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVV
GGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGE
KL
>b3226 nanR, Nan regulator
MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMIRRREFG
EGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSA
DTIIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDL
LAKALEINSQSLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLI
AARPTVTDQALHEHNNVSYQQHIAIVDAIRRHDPDEADRALQSHLNSVSA
TWHAFGQTTNKKK
>b1221 narL, pleiotrophic regulation of anaerobic respiration: response regulator for nar, frd, dms and tor genes
MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAES
LDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALK
RGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTE
RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKL
KSRVEAAVWVHQERIF
>b2193 narP, nitrate/nitrite response regulator (sensor NarQ)
MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANR
LDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALID
AGADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDP
FSVLTERELDVLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRS
RVAATILFLQQRGAQ
>b0020 nhaR, transcriptional activator of nhaA
MSMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQG
KLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVG
VADALSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIIS
DCPIDSTQQEGLFSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRR
SMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAMHNAIFVAPTLYAYD
FYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRICNTDYSALFSPAV
R
>b3481 nikR, nickel-responsive transcriptional regulator
MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEATQQHGT
QGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAV
LKGDMGDVQHFADDVIAQRGVRHGHLQCLPKED
>b3188 nlp, regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu
MESNFIDWHPADIIAGLRKKGTSMAAESRRNGLSSSTLANALSRPWPKGE
MIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK
>b4071 nrfB, formate-dependent nitrite reductase; a penta-haeme cytochrome c
MNMSVLRSLLTAGVLASGLLWSLNGITATPAAQASDDRYEVTQQRNPDAA
CLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMR
FNEPMYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQ
DTMQTLSDKGRIKICVDCHSDQRTNPNFNPASVPLLKEQP
>b3169 nusA, transcription pausing; L factor
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVQID
RKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESV
TFDRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNI
SLDLGNNAEAVILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRS
KPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGA
CVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQA
EAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKELLEIEGLDE
PTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGVDRDLAFKLAA
RGVCTLEDLAEQGIDDLADIEGLTDEKAGALIMAARNICWFGDEA
>b0416 nusB, transcription termination; L factor
MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRE
LLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPY
KVAINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK
>b3982 nusG, component in transcription antitermination
MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVV
EIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRP
APISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEE
VDYEKSRLKVSVSIFGRATPVELDFSQVEKA
>b3405 ompR, response regulator (sensor, EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis
MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFH
LMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGAD
DYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTR
EMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERS
IDVQISRLRRMVEEDPAHPRYIQTVWGLGYVFVPDGSKA
>b3961 oxyR, activator, hydrogen peroxide-inducible genes
MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLER
TSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPT
VGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVK
ESEAFIEVPLFDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCL
RDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPPERK
RDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKV
LKQAV
>b1399 paaX, transcriptional repressor for phenylacetic acid degradation
MSKLDTFIQHAVNAVPVSGTSLISSLYGDSLSHRGGEIWLGSLAALLEGL
GFGERFVRTALFRLNKEGWLDVSRIGRRSFYSLSDKGLRLTRRAESKIYR
AEQPAWDGKWLLLLSEGLDKSTLADVKKQLIWQGFGALAPSLMASPSQKL
ADVQTLLHEAGVADNVICFEAQIPLALSRAALRARVEECWHLTEQNAMYE
TFIQSFRPLVPLLKEAADELTPERAFHIQLLLIHFYRRVVLKDPLLPEEL
LPAHWAGHTARQLCINIYQRVAPAALAFVSEKGETSVGELPAPGSLYFQR
FGGLNIEQEALCQFIR
>b0113 pdhR, transcriptional regulator for pyruvate dehydrogenase complex
MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPS
LREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDL
LETRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAV
LQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSS
HRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREESRRERSLRRLE
QRKN
>b0254 perR, peroxide resistance protein
MKLLAKAPLNLLRAFEAAGRTGAFALAASELELSPSAISHAIRKLENLLD
VRLFQRSTREITLTKEGEILLEHIQRGFNELQQGLALVTADESRPLRLHT
APSFAHQWLLPRLGKFIRENPSIDLRLSASTEYARFEQDDFDLDIVYGEP
RPSPYEKIPLAVEELTPLCSPQLAERLKKPEDLYALTLIQCDVQLYQWKG
WFEANKMTPPNNYGLRFDRSFMAIAAAVDGLGVVLESKLLAEREIASGKL
VCPLVNSTSEIHYIGHYLVFPQHQHMHSALDVFKTWLLNELNLGKIR
>b4102 phnF, putative transcriptional regulator
MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAARFEVNRH
TLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSH
PTSEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGVALCLIDHYF
ADLTLWPTLQRFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLE
IPNMSPLLCVRTLNHRDGESSPAEYSVSLTRADMIEFTMEH
>b4093 phnO, putative regulator, phn operon
MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRDPNMRYH
LALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAW
AEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL
>b0399 phoB, positive response regulator for pho regulon, sensor is PhoR (or CreC)
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLI
LLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGAD
DYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGE
EPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIR
RLRKALEPGGHDRMVQTVRGTGYRFSTRF
>b1130 phoP, transcriptional regulatory protein
MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHIPDIAIV
DLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVT
KPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKL
TAFEYTIMETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKK
IQAQYPQEVITTVRGQGYLFELR
>b0330 prpR, regulator for prp operon
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAV
TYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILIKPSGYDVLQALAKA
GKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKA
NGTEAVVGAGLITDLAEEAGMTGIFIYSAATVRQAFSDALDMTRMSLRHN
THDATRNALRTRYVLGDMLGQSPQMEQVRQTILLYARSSAAVLIEGETGT
GKELAAQAIHREYFARHDARQGKKSHPFVAVNCGAIAESLLEAELFGYEE
GAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTR
VGGHQPVPVDVRVISATHCNLEEDMQQGRFRRDLFYRLSILRLQLPPLRE
RVADILPLAESFLKVSLAALSAPFSAALRQGLQASETVLLHYDWPGNIRE
LRNMMERLALFLSVEPTPDLTPQFMQLLLPELARESAKTPAPRLLTPQQA
LEKFNGDKTAAANYLGISRTTFWRRLKS
>b1304 pspA, phage shock protein, inner membrane protein
MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARA
LAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDL
IKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALMLRHQAANSSR
DVRRQLDSGKLDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAEL
KADDAISEQLAQLKAKMKQDNQ
>b1306 pspC, phage shock protein: activates phage shock-protein expression
MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLSIFFGLA
LFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLRE
MERYVTSDTFTLRSRFRQL
>b1303 pspF, psp operon transcriptional activator
MANFIMAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELI
ASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGR
FERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLV
CATNADLPAMVNEGTFRADLLDRLAFDVVQLPPLRERESDIMLMAEYFAI
QMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSDY
PLDDIIIDPFKRRPPEDAIAVSETTSLPTLPLDLREFQMQQEKELLQLSL
QQGKYNQKRAAELLGLTYHQFRALLKKHQI
>b1658 purR, transcriptional repressor for pur regulon, glyA, glnB, prsA, speA
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAV
ARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNN
LEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEA
KADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGF
MKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIM
AMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGET
AFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>b3753 rbsR, regulator for rbs operon
MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSAL
ARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGD
EQRMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPF
DGDSDLIQDNSLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYR
AAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMA
VGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELA
IDVLIHRITQPTLQQQRLQLTPILMERGSA
>b1951 rcsA, positive regulator for ctr capsule biosynthesis, positive transcription factor
MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSV
VFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKN
LLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWM
AGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTN
GIFVNMR
>b2217 rcsB, positive response regulator for colanic capsule biosynthesis, (sensor, RcsC)
MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINNLPKLDA
HVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLD
LDIEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKR
LSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIA
LLNYLSSVTLSPADKD
>b3652 recG, DNA helicase, resolution of Holliday junctions, branch migration
MKGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRYEDRTHL
YPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFS
AAMKNSLAAGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTP
VYPTTEGVKQATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRT
LHRPPPTLQLSDLETGQHPAQRRLILEELLAHNLSMLALRAGAQRFHAQP
LSANDTLKNKLLAALPFKPTGAQARVVAEIERDMALDVPMMRLVQGDVGS
GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFAPLGIEVGW
LAGKQKGKARLAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQH
RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
LPPGRTPVTTVAIPDTRRTDIIDRVHHACITEGRQAYWVCTLIEESELLE
AQAAEATWEELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVAT
TVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKT
PLSKTAQIRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVAD
LLRDQAMIPEVQRLARHIHERYPQQAKALIERWMPETERYSNA
>b2784 relA, (p)ppGpp synthetase I (GTP pyrophosphokinase); regulation of RNA synthesis; stringent factor
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHP
DASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVG
KSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVV
IKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELED
YCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVY
GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHY
RHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELG
VAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQ
VFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQD
RDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGD
IRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVE
GVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPE
RIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASR
SDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>b3842 rfaH, transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysin
MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPL
FPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYK
PKDIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEI
KHSVKNTEFRKL
>b3630 rfaP, lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co
MVELKEPLATLWRGKDAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLK
WHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVGVDTMKGIGFGEK
GLNPLTRASFIITEDLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMV
RKMHTAGINHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRAKVPRR
WRDKDLIGLYFSSMNIGLTQRDIWRFMKVYFGMPLRKILSLEQNLLNMAS
VKAERIKERTQRKGL
>b3624 rfaZ, lipopolysaccharide core biosynthesis
MKNIRYIDKKDVENLIENKISDDVIIFLSGPTSQKTPLSVLRTKDIIAVN
GSAQYLLSNNIVPFIYVLTDVRFLHQRRDDFYKFSQRSRYTIVNVDVYEH
ASKEDKLYILQNCLVLRSFYRREKGGFIKKIKFNILRQIHKELLISVPLS
KKGRLVGFCKDISLGYCSCHTIAFAAIQIAYSLKYARIICSGLDLTGSCS
RFYDENKNPMPSELSRDLFKILPFFRFMHDNVKDINIYNLSDDTAISYDV
IPFIKLQDISAEESKDMTRKKMQYRTSTDSYAN
>b3906 rhaR, positive regulator for rhaRS operon
MAFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFASDQQAV
AVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHA
DDKHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFNASAGQPHWRLGS
MGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLNRHRYTSDSLP
PTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTGMT
INQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT
PSQWRHLNSQKD
>b3905 rhaS, positive regulator for rhaBAD operon
MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVF
NGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQ
LLPQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILF
MQLLLLLRKSSLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLS
LRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVTDIAYRCGFSD
SNHFSTLFRREFNWSPRDIRQGRDGFLQ
>b3780 rhlB, putative ATP-dependent RNA helicase
MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVA
GQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQI
HADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAK
QNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSAT
LSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL
IEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRA
GASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLT
RPRTGNGPRRTGAPRNRRRSG
>b0797 rhlE, putative ATP-dependent RNA helicase
MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTG
KTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK
YLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQV
EILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEK
LLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLV
FTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC
VDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRG
QGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP
AAAQ
>b3783 rho, transcription termination factor Rho; polarity suppressor
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIF
GDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGK
IRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERG
NGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHP
DCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKA
KRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIA
EKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLI
NKLAMTKTNDDFFEMMKRS
>b1286 rnb, RNase II, mRNA degradation
MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQ
MKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIV
PDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQY
ITFGDDHFVPWWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTI
DSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSKLDKAAKIRAF
TNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGTIEDNIEF
FAATIESKAKLVYDQVSDWLENTGDWQPESEAIAEQVRLLAQICQRRGEW
RHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICA
ARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIR
KYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLY
ARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA
>b2567 rnc, RNase III, ds RNA
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSY
VIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGE
LKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPG
DKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEP
VVGTGSSRRKAEQAAAEQALKKLELE
>b0610 rnk, regulator of nucleoside diphosphate kinase
MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMCSPEEMP
HDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLG
LRVGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL
>b4179 rnr, ribonuclease R
MTKIFIRDDNGGTEMSQDPFQEREAEKYANPIPSREFILEHLTKREKPAS
RDELAVELHIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVK
GTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGR
REARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPPDQIMGA
RMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDIALRTHEIPYI
WPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDARDFDDAVYCE
KKRGGGWRLWVAIADVSYYVRPSTPLDREARNRGTSVYFPSQVIPMLPEV
LSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKV
WHILQGDQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKF
IFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEPALFRIH
DKPSTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESVADRPDAEMLQ
TMLLRSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLTLHRAIKYLL
AKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKC
DFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRFDQ
VGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGK
TAREKAKKGDAGKKGGKRRQVGKKVNFEPDSAFRGEKKTKPKAAKKDARK
AKKPSAKTQKIAAATKAKRAAKKKVAE
>b4396 rob, right origin-binding protein
MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAI
GAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTP
ALYRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLE
QISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTT
ALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILTVYGTCMPM
LNLTRRKGQDIERYYPAEDAKAGDRPINLRCELLIPIRR
>b0189 rof, modulator of Rho-dependent transcription termination.
MSMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASDLVSRKN
VEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES
>b4089 rpiR, transcriptional repressor of rpiB expression
MASSIQGQENVMSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLL
KPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQ
SEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFY
QARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEG
DVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICS
PAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDF
FSPGALK
>b3295 rpoA, RNA polymerase, alpha subunit
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSS
MPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVIL
TLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGR
GYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDK
LVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFD
PILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
>b3987 rpoB, RNA polymerase, beta subunit
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLE
AAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKL
RLVIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLH
RSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDR
RRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQMELVPERLRGET
ASFDIEANGKVYVEKGRRITARHIRQLEKDDVKLIEVPVEYIAGKVVAKD
YIDESTGELICAANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISET
LRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAV
GRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISA
AVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDV
HPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDEEGHFVEDLVTCRSKGESSLFSRDQV
DYMDVSTQQVVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLV
GTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDEMYPGEAGIDI
YNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQNM
RVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEI
TADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEE
MQLKQAKKDLSEELQILEAGLFSRIRAVLVAGGVEAEKLDKLPRDRWLEL
GLTDEEKQNQLEQLAEQYDELKHEFEKKLEAKRRKITQGDDLAPGVLKIV
KVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNP
LGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQRAYD
LGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLK
LGDLPTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGS
YSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNG
RTKMYKNIVDGNHQMEPGMPESFNVLLKEIRSLGINIELEDE
>b3988 rpoC, RNA polymerase, beta prime subunit
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFK
PERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRE
RMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGG
MTNLERQQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQ
LREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS
GRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKM
VEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPII
VPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKV
RITEYEKDANGELVAKTSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQIMYTGFAYAARSGASVGIDDMVIPEKK
HEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDN
LQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKP
DGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLK
PGTADILVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSI
QVKNKGSIKLSNVKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYG
AVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMIDGQTITRQT
DELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDVLIPGTDMPAQYF
LPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFEARRP
KEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE
GERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKIND
KHIEVIVRQMLRKATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGA
TYSRDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKEN
VIVGRLIPAGTGYAYHQDRMRRRAAGEAPAAPQVTAEDASASLAELLNAG
LGGSDNE
>b3067 rpoD, RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures
MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMIND
MGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRM
YMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDR
VEAEEARLSDLITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEED
GDDDSADDDNSIDPELAREKFAELRAQYVVTRDTIKAKGRSHATAQEEIL
KLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERLIMKLCVEQCKMPKK
NFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVSEEVHRALQKLQQIEEE
TGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQ
FLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKI
AKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAG
LTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRERIRQIEAKALRKLRH
PSRSEVLRSFLDD
>b2573 rpoE, RNA polymerase, sigma-E factor; heat shock and oxidative stress
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSGDVPDVV
QEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDA
IEAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRE
LDGLSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR
>b3461 rpoH, RNA polymerase, sigma(32) factor; regulation of proteins induced at high temperatures
MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAA
KTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVR
LVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFN
QDEVEMVARELGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLY
LQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDIIRARWLDEDNK
STLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
>b3202 rpoN, RNA polymerase, sigma(54 or 60) factor; nitrogen and fermentation regulation
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQI
DTHEEIDTRETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGT
SGDYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDE
TGYLTVPLEDILESIGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLL
IQLSQFDKTTPWLEEARLIISDHLDLLANHDFRTLMRVTRLKEDVLKEAV
NLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNSDSIPRLQIN
QHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQ
QQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELK
YFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
IMVARRTVAKYRESLSIPPSNQRKQLV
>b2741 rpoS, RNA polymerase, sigma S (sigma38) factor; synthesis of many growth phase related proteins
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEELLSQGA
TQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLR
LVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWI
RQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAE
QLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTT
QDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRE
>b3649 rpoZ, RNA polymerase, omega subunit
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIA
LREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR
>b3995 rsd, regulator of sigma D
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKESYMRLN
EKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANT
QQIMDYYDSSLETAIDHDNYLEFQQVLSDIGEALEARFVLEDKLILLVLD
AARVKHPA
>b1608 rstA, response transcriptional regulatory protein (RstB sensor)
MNVMNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRENPD
LVLLDIMLPGKDGMTICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACD
YILKTTPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTID
PINRVVTLANTEISLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDG
LDRSVDVAISRLRKKLLDNAAEPYRIKTVRNKGYLFAPHAWE
>b3422 rtcR, sigma54-dependent regulator of rtcBA expression
MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDA
RSRSLFETLKRDIASVSPETEVVSVEIELHNPWDFEEVYACLHDFARGYE
FQPEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQSSPPRKKEQPRG
PGEVTIIDLDLSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQI
EKVAIKSRAPILLNGPTGAGKSFLARRILELKQARHQFSGAFVEVNCATL
RGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFLDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYAR
INLWTFTLPGLRQRQEDIEPNLDYEVERHASLTGDSVRFNTEARRAWLAF
ATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQ
GKASVNDADRLRKYLARFGLTWEAVQDQHSSS
>b1916 sdiA, transcriptional regulator of ftsQAZ gene cluster
MQDKDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPV
PFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLF
SEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDEL
QLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEI
AMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
>b4300 sgcR, putative DEOR-type transcriptional regulator
MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYP
GMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCF
FLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRP
GYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRII
QRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAG
CQLFLPHSIK
>b1642 slyA, transcriptional regulator for cryptic hemolysin
MKLESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLPPDQS
QIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEP
LISEMEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG
>b3129 sohA, putative protease; htrA suppressor protein
MPANARSHAVLTTESKVTIRGQTTIPAPVREALKLKPGQDSIHYEILPGG
QVFMCRLGDEQEDHTMNAFLRFLDADIQNNPQKTRPFNIQQGKKLVAGMD
VNIDDEIGDDE
>b4063 soxR, redox-sensing activator of soxS
MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYK
RDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWRE
ELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLE
DEQN
>b4062 soxS, regulation of superoxide response regulon
MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTL
GDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTP
SDYRHRL
>b3650 spoT, (p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase
MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPV
AVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGV
SKLDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSL
RPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKE
VVKAARGNRKEMIQKILSEIEGRLQEAGIPCRVSGREKHLYSIYCKMVLK
EQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKA
NGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTT
AQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFTPEGRIVEL
PAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKL
NEIPQENIQRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPP
ATQSHGHLPIKGADGVLITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCR
NIRGYQKEPEKFMAVEWDKETAQEFITEIKVEMFNHQGALANLTAAINTT
TSNIQSLNTEEKDGRVYSAFIRLTARDRVHLANIMRKIRVMPDVIKVTRN
RN
>b2707 srlR, regulator for gut (srl), glucitol operon
MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILEHAGTVI
RTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAG
STVLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSA
SFHGQLAENAFEHFTFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAR
EVILMADSSKFGRKSPNVVCSLESVDKLITDAGIDPAFRQALEEKGIDVI
ITGESNE
>b2576 srmB, ATP-dependent RNA helicase
MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPT
GTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELA
KHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRA
VETLILDEADRMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFA
ERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEATR
SIVFVRKRERVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVN
VLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARAGRKGTAIS
LVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLA
KRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE
>b3118 tdcA, transcriptional activator of tdc operon
MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIINDIEDYFG
VELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVS
FGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFA
IGTLSAEMKLQDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLP
QTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDM
TSPFGSNQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSSY
NGCRRRQLIEVG
>b0995 torR, response transcriptional regulator for torA (sensor TorS)
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLI
LLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYV
TKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLE
RDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVD
VLIRRLRHKLSADLLVTQHGEGYFLAADVC
>b4241 treR, repressor of treA,B,C
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQLTRERVEAVMNQHGFSP
SRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMES
QFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAK
GFASVCYDDEGAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLA
FCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCATDTLALGASKY
LQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLS
>b4393 trpR, regulator for trp operon and aroH; trp aporepressor
MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTPDEREA
LGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWL
EEVLLKSD
>b3641 ttk, putative transcriptional regulator
MPPGKCLFSGVFCNMAEKQTAKRNRREEILQSLALMLESSDGSQRITTAK
LAASVGVSEAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTA
RLRLIVLLLLGFGERNPGLTRILTGHALMFEQDRLQGRINQLFERIEAQL
RQVLREKRMREGEGYTTDETLLASQILAFCEGMLSRFVRSEFKYRPTDDF
DARWPLIAAQLQ
>b1323 tyrR, transcriptional regulation of aroF, aroG, tyrA and aromatic amino acid transport
MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFAELEFES
FSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKS
KVDMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHV
VINGQNFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDV
SAFSQIVAVSPKMKHVVEQAQKLAMLSAPLLITGDTGTGKDLFAYACHQA
SPRAGKPYLALNCASIPEDAVESELFGHAPEGKKGFFEQANGGSVLLDEI
GEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVRVICATQKNLVELVQKG
MFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQGVPRPKLA
ADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANK
LREYGLSQKKNEE
>b3669 uhpA, response regulator, positive activator of uhpT transcription (sensor, uhpB)
MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRGVQV
CICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLS
KRCSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLA
QGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW
>b1618 uidR, repressor for uid operon
MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAISPGTLYH
HFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFG
QRALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDI
NTAMTSRLLLDLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS
>b1183 umuD, SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC
MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA
TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ
LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR
>b1914 uvrY, putative 2-component transcriptional regulator
MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCRTNAVDV
VLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAG
YLSKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASL
SERELQIMLMITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVEL
THLAIRHGLCNAETLSSQ
>b4324 uxuR, regulator for uxu operon
MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVV
REALIMLEIKGLVEVRRGAGIYVLDNSGSQNTDSPDANVCNDAGPFELLQ
ARQLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQ
FHLAIAEATHNSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGD
HKQILAALIKKDARAAKLAMWQHLENVKQRLLEFSNVDDIYFDGYLFDSW
PLDKVDA
>b2405 xapR, regulator for xapA
MERVYRTDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELENQLG
TQLFIRHSRSVVLTHAGKILMEESRRLLVNANNVLARIEQIGRGEAGRIE
LGVVGTAMWGRMRPVMRRFLRENPNVDVLFREKMPAMQMALLERRELDAG
IWRMATEPPTGFTSLRLHESAFLVAMPEEHHLSSFSTVPLEALRDEYFVT
MPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLAMVSMGIGITLIADS
YAQMNWPGVIFRPLKQRIPADLYIVYETQQVTPAMVKLLAALTQ
>b3569 xylR, putative regulator of xyl operon
MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID
KIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIA
TDNYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEE
KYRGVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQ
VCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGARQMGYQAAKLL
HRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK
GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTT
LSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML
>b0208 yafC, putative transcriptional regulator LYSR-type
MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLL
NRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAA
TPVVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLT
DSSLRARPLFNSYRKIIASPDYISRYGKPETIDDLKQHICLGFTEPASLN
TWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGIACLSDYMIDKEIAR
GELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVKTAPGGA
VREA
>b0234 yafP, orf, hypothetical protein
MNNIQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQISAWAQIDESRWK
EKLAKSQVWVAIINAQPVGFISRIEHYIDMLFVDPEYTRRGVASALLKPL
IKSESELTVDASITAKPFFERYGFQTVKQQRVECRGAWFTNFYMRYKPQH
>b0251 yafY, hypothetical transcriptional regulator
MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRE
RLMYLDLEYQSGYCHYRHCCHRHHSEQNRGVRQSRGPDPCHCCRTADGRW
RSRCCQCRADTVRRRAGGYFRGHLCLCQSGSSDFRKKIMKRKTLPLLALV
ATTLFLIACDDRSDDLKAISKFKDLTPPRFSDVVSHQDDVSEEWSQVDYL
SGPTLQVLRTRQSPDGCEDGSYYYLVDMQEKTVQPLMNALCIADNIKLEY
QEVTDPYTKEKYFEYAHDGKLMGQLLIPSNPDNQE
>b0272 yagI, putative regulator
MPIIQSVERALQILDLFNEQATELKITDISKLMGLSKSTLHSLLKTLQLH
GYIDQNPENGKYRLGMKLVERGHFVVGSIDIRQKAKGWLTELSRRTGQTT
HLGILDGREGVYIEKIEGKLAAIAYSRIGRRLPVHATAIGKVLIAWLGEA
ELNALLEGYQYTTFTPATLASREALMSALAQTREQGYALDSEENEQGVRC
VAVPVWNHESRVIAALSLSTLTSRVDDAELANFREQLQQAGLALSRALGY
PA
>b0282 yagP, putative transcriptional regulator LYSR-type
MPAPVVLILAAGRGECFLASGGNTHKCIGWRQSPEVAPYRWPFEENGRTF
DLAIEPQITTNDLRLMLRLALAGGGITIATQETFRPYIESGKLVSLLDDF
LPQFPGFYLYFPQRRNIAPKLRALIDYVKEWRQQLA
>b0315 yahA, orf, hypothetical protein
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRN
RSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYIN
DNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQ
TGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGIN
VSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFD
SLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGH
IVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGN
KFISEWVMKAGG
>b0316 yahB, putative transcriptional regulator LYSR-type
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVV
LFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRIC
INQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAI
GAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNI
MVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVR
EAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG
IYQDLLHREN
>b0375 yaiV, orf, hypothetical protein
MPVKDLTGITAKDAQMLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIF
SSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYK
LISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIG
HNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALR
KGGYIEMNKGKLVAINRLPSEY
>b0394 yajF, possible NAGC-like transcriptional regulator
MNHSMIISTALSLNLAGMITNCRRPCIANPVVRLYAIDIEKNKESTVRIG
IDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQAT
GQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLAN
DANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGE
WGHNPLPWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHA
LKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGM
SNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWPQE
>b0413 ybaD, orf, hypothetical protein
MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPR
VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGE
REVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED
>b0447 ybaO, putative LRP-like transcriptional regulator
MVFKPHRINCRDFTFKIKLKEKKILCGRAMLDKIDRKLLALLQQDCTLSL
QALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIGLGLTAFVLIK
TQHHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFY
KRLVNSVPGLSDVTSSFAMEQIKYTTSLPIE
>b0504 ybbS, putative transcriptional regulator LYSR-type
MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFF
RTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINN
LLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVT
GTEALANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIE
DSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKSLCQSMI
DNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFL
EIFGNPRS
>b0546 ybcM, putative ARAC-type regulatory protein
MLARGKTNLKIEEIRMHKHHEIHRVKPLMPALCRIRQGKKVINWETHTLT
VDNNQIILFPCGYEFYIENYPEAGLYLAEMLYLPIDLIESFQKLYTVTDQ
IRNKTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNH
VNHLLLSYSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLA
SEGVSFQSILDDVRLNNALSAIQTTVKPISEIARENGYKCPSRFTERFHN
RFNITPREIRKASRE
>b0601 ybdM, orf, hypothetical protein
MGDTMQQRLTQDLTQFLASLPEDDRIKAINEIRMAIHQVSPFREEPVDCV
LWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDKNAME
IVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGR
HQITAMSEIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADR
QYSRAWTVK
>b0603 ybdO, putative transcriptional regulator LYSR-type
MANLYDLKKFDLNLLVIFECIYQHLSISKAAESLYITPSAVSQSLQRLRA
QFNDPLFIRSGKGIAPTTTGLNLHHHLEKNLRGLEQTINIVNKSELKKNF
IIYGPQLISCSNNSMLIRCLRQDSSVEIECHDILMSAENAEELLVHRKAD
LVITQMPVISRSVICMPLHTIRNTLICSNRHPRITDNSTYEQIMAEEFTQ
LISKSAGVDDIQMEIDERFMNRKISFRGSSLLTIINSIAVTDLLGIVPYE
LYNSYRDFLNLKEIKLEHPLPSIKLYISYNKSSLNNLVFSRFIDRLNESF
>b0629 ybeF, putative transcriptional regulator LYSR-type
MLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLE
SILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNP
PISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLS
LEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIA
ALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSL
RDPILHGVIDVIRNAF
>b0768 ybhD, putative transcriptional regulator LYSR-type
MQLKFLTASHPKSSLPFSGVIMKHELSSMKAFVILAESSSFNNAAKLLNI
TQPALTRRIKKMEEDLHVQLFERTTRKVTLTKAGKRLLPEARELIKKFDE
TLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQ
GTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAK
KQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTS
LGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVL
SPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>b0796 ybiH, putative transcriptional regulator
MDCAMNNPAMTIKGEQAKKQLIAAALAQFGEYGMNATTREIAAQAGQNIA
AITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIR
ELILRACRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHS
HLTRLIAAWTGCDANDTRMILHTHALIGEILAFRLGKETILLRTGWTAFD
EEKTELINQTVTCHIDLILQGLSQRSL
>b0900 ycaN, putative transcriptional regulator LYSR-type
MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLF
NRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAA
RVAARIFLMSLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSCIV
EKDMISVAIGPPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGK
PFHWQFAKELEIAVAGNIILDDVDAELEAVLMGAGIGYLLYEQIKEYLDT
GRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVKTGQICQSQRHR
PQ
>b0959 yccR, orf, hypothetical protein
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYL
RACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSK
YSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAK
MCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTP
KQEFPAELE
>b1013 ycdC, hypothetical transcriptional regulator
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGV
SKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRL
KLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVK
SGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVEN
VQRIIIEGIRPR
>b1111 ycfQ, orf, hypothetical protein
MGSGLVNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKVFDRDAA
LDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRY
IDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCT
TLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFL
NCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
>b1119 ycfX, putative NAGC-like transcriptional regulator
MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVCELVAEA
DQRFGCKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDV
RLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSY
ITGEFGHMRLPVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQH
YYHQPLQAPEIIALYDQGDEQARAHVERYLDLLAVCLGNILTIVDPDLVV
IGGGLSNFPAITTQLADRLPRHLLPVARVPRIERARHGDAGGMRGAAFLH
LTD
>b1162 ycgE, putative transcriptional regulator
MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRI
EEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKL
RARIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYA
ATSLFEMRRKPGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIE
SPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIFHAP
>b1284 yciT, putative DEOR-type transcriptional regulator
MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKLSYLRRA
HGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNAL
LARTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPL
TRQCIQQVHFSKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEAIVL
TDSSKFGAVHSYSIGPVERFNRVITDSKIRASDLMHLEHSKLTIHVVDI
>b1299 ycjC, orf, hypothetical protein
MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAIS
TLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHN
GNPNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHL
VAGQSYAINTGIPHSFSNTSAGICRIISAHTPTTF
>b1320 ycjW, putative LACI-type transcriptional regulator
MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEELQYQPNK
LARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVIL
QTSHNPAEDLQKCESKIKQKMIKGIIMLSSPADESFFAQLDKYDIPVVVI
GKVEGQYAHVYSVDTDNFGDSIALTDALIESGHQNIACLHAPLDVHVSVD
RVNGYKQSLAAHNIAVRDEWIVDGGYTHETALKAARQLLSQSPLPEAVFA
TDSLKLMSIYRAAAEKNIAIPQQLAVVGYSNETLSFILTPAPGGIDVPTQ
ELGQQSCELLFRLISGKPSPQNITVATHMTLK
>b1328 ycjZ, putative transcriptional regulator LYSR-type
MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRL
LTRTTRSVVPTEAGEHLLSVLGPMLHDIDSAMASLSDLQNRPSGTIRITT
VEHAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGE
MDKDMIAIRIGPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTS
GTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVE
RAIKEKKLIRVLDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRLKYKGAV
>b1422 ydcI, putative transcriptional regulator LYSR-type
MISPRKHQYYPFCCNIIALIVNNILQSSYHNQTTSLVSDTASFLTSLMEK
NSLFSQRIRLRHLHTFVAVAQQGTLGRAAETLNLSQPALSKTLNELEQLT
GARLFERGRQGAQLTLPGEQFLTHAVRVLDAINTAGRSLHRKEGLNNDVV
RVGALPTAALGILPSVIGQFHQQQKETTLQVATMSNPMILAGLKTGEIDI
GIGRMSDPELMTGLNYELLFLESLKLVVRPNHPLLQENVTLSRVLEWPVV
VSPEGTAPRQHSDALVQSQGCKIPSGCIETLSASLSRQLTVEYDYVWFVP
SGAVKDDLRHATLVALPVPGHGAGEPIGILTRVDATFSSGCQLMINAIRK
SMPF
>b1434 ydcN, orf, hypothetical protein
MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVA
TLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFE
HFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVR
FAADVTHIYRNGGEQTVHFHSLIHYPRS
>b1439 ydcR, multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system
MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLL
ESQGYIIARPQSGYYVAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQAS
RDPSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAEL
RQAIARRYALQGITISPDEIVITAGALEALNLSLQAVTEPGDWVIVENPC
FYGALQALERLRLKALSVATDVKEGIDLQALELALQEYPVKACWLMTNSQ
NPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDR
HDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLA
LVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYF
LWLELPEPLDAGELSLAALTHHISIAPGKMFSTGENWSRFFRFNTAWQWG
EREEQAVKQLGKLIQERL
>b1499 ydeO, putative ARAC-type regulatory protein
MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKE
IGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEE
RNHHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKPAHP
WKLKDICDCLYISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSV
NKIAEQCGYASTSYFIYAFRKHFGNSPKRVSKEYRCQSHTGMNTGNTMNA
LAI
>b1512 ydeW, putative transcriptional regulator, sorC family
MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRL
LEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGG
RLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLS
GGVGSYMTGIGQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAA
QAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFD
AKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY
INALVTDQDTAAAILRS
>b1540 ydfH, orf, hypothetical protein
MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVRFNVSRQ
PVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARR
AASMITESQCYQLEQNLHQQRIAIERKQLDDFFELDDNFHQLLTQIADCQ
LAWDTIENLKATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVE
RAMTQHLQEISESVRQIRQENSDWFSEE
>b1659 ydhB, putative transcriptional regulator LYSR-type
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFE
RRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDN
IVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATR
AIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVRED
TSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLN
EGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLR
EPEETPATGD
>b1649 ydhM, hypothetical transcriptional regulator
MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGSFYHYFR
SKEAFGVAMLERHYAAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQH
GTISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCL
TFCGEPLQQAQVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV
>b1696 ydiP, putative ARAC-type regulatory protein
MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNETELIYVK
KGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQ
FQGAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLW
DAFAYTLAILYYENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLE
QLSKKFRASVSYICHEFTKEYRISPINYVIQRRMTEAKWSLTNTELSQAE
ISWRVGYENVDHFAKLFLRHVGCSPSDYRRQFKNCFAEQEILSEFPQPVS
LVG
>b1724 ydiZ, orf, hypothetical protein
MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEGNIHELG
TNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK
>b1770 ydjF, putative DEOR-type transcriptional regulator
MAAKDRIQAIKQMVANDKKVTVSNLSGIFQVTEETIRRDLEKLEDEGFLT
RTYGGAVLNTAMLTENIHFYKRASSFYEEKQLIARKALPFIDNKTTMAAD
SSSTVMELLKLLQDRSGLTLLTNSAEAIHVLAQSEIKVVSTGGELNKNTL
SLQGRITKEIIRRYHVDIMVMSCKGLDINSGALDSNEAEAEIKKTMIRQA
TEVALLVDHSKFDRKAFVQLADFSHINYIITDKSPGAEWIAFCKDNNIQL
VW
>b1790 yeaM, putative ARAC-type regulatory protein
MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLILALHGA
ITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPT
TCCTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQL
HLPVSSHPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVKETG
LSFRQWRQQLQLIMALQGLVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQ
TPGRYIARLTTVSPQSAKPDPRQ
>b1799 yeaT, putative transcriptional regulator LYSR-type
MKHKTRIMNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALL
EQTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVP
QGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVD
LDIRIGDDIAPNLIARKLATNYRILCASPEFIAQHGAPKHLTDLSALPCL
VIKERDHPFGVWQLRNKEGPHAIKVTGPLSSNHGEIVHQWCLDGQGIALR
SWWDVSENIASGHLVQVLPEYYQPANVWAVYVSRLATSAKVRITVEFLRQ
YFAEHYPNFSLEHA
>b1853 yebK, orf, hypothetical protein
MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEANVSEPT
VNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFE
SAMATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKF
FRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARE
NDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSRLAQLTVIDVL
ATGFTLRRGAKFRDNLKRVKEALKESRFDKQLLNLSDDR
>b1932 yedL, orf, hypothetical protein
MFTIKTDDLTHPAVQALVAYHISGMLQQSPPESSHALDVQKLRNPTVTFW
SVWEGEQLAGIGALKLLDDKHGELKSMRTAPNYLRRGVASLILRHILQVA
QDRCLHRLSLETGTQAGFTACHQLYLKHGFADCEPFADYRLDPHSRFLSL
TLCENNELP
>b1969 yedW, putative 2-component transcriptional regulator
MNQAVSITYDLWHIIFMKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGR
DGLYLALKDDYALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVD
DRVRGLDSGANDYLVKPFSFSELLARVRAQLRQHHALNSTLEISGLRMDS
VSHSVSRDNISITLTRKEFQLLWLLASRAGEIIPRTVIASEIWGINFDSD
TNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSFVAVKK
>b2015 yeeY, putative transcriptional regulator LYSR-type
MHCKGACMKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLES
DLNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWEN
ELVIGVDDTFPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRA
DIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKR
YRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGYLPR
YLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANS
AIAGVYAKSDDGKSAI
>b2101 yegW, putative transcriptional regulator
MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHGNILPGE
RDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARG
FSQQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVD
EEAVSIEESWVPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPD
AEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSDLYVFVCEE
>b2125 yehT, orf, hypothetical protein
MEGRGMIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHK
LRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHA
FDYLLKPIDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRI
YLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQY
LVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL
>b2127 yehV, putative transcriptional regulator
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRI
REIKRWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSL
RTWIKERGQDYPAQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYI
AICLASARKKQGKDALVVGWNIQDTTRLWLEGWIASQQGWRIDVLAHSLN
QLRPELFEGRTLLVWCGENRTSAQQQQLTSWQEQGHDIFPLGI
>b2157 yeiE, putative transcriptional regulator LYSR-type
MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLF
DRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIG
NYILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHS
TEIISEPWLEDELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREI
VDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCLSRRVIEDQLQAGT
LSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYCDPANVPR
>b2184 yejH, putative ATP-dependent helicase
MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARG
RVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSV
ARNLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLT
ATPFRLGKGWIYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPE
RLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHIISQIMEFAA
TRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIENFKAQR
FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTD
CLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTAD
GTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDED
GADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALL
RHPDFVVARMKGQYWQVREKVFDYEGRFRLAHELRG
>b2238 yfaH, orf, hypothetical protein
MNFIRQGLGIALQPELTLKSIAGELCSVPLEPTFYRQISLLAKEKPVEGS
PLFLLQMCMEQLVAIGKI
>b2248 yfaX, putative regulator
MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELR
RQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLL
CHLGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLAWQPA
AVQQSIIEGLVWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYADVR
CVAAPVFNANNELTAAISVVGTRLQINEEYRDYLAGKAIACARDISRLLG
WKSPFDLQAS
>b2399 yfeD, orf, hypothetical protein
MKRLRNKMTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLIL
VDTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGARAPAYRQIINAIDNM
TDIEQEKVAQFLSREGIRNFLARLDIDESA
>b2437 yfeG, putative ARAC-type regulatory protein
MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHALTITAW
QQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGI
PATRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVIT
RQANFLHNPDRVLHMLRNQSALEVKEQHKAALWGFVQQALATFCENPENL
HQPAVRKVLGDNLLMAMGAMLEEAQPMVTAESISHQSYRRLLSRAREYVL
ENMSEPVTVLDLCNQLHVSRRTLQNAFHAILGIGPNAWLKRIRLNAVRRE
LISPWSQSMTVKDAAMQWGFWHLGQFATDYQQLFSEKPSLTLHQRMREWG
>b2409 yfeR, putative transcriptional regulator LYSR-type
MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENHTGVRLL
DRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAAS
QTISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVID
PGPVGDLQCEAILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYAS
GSRPLIDAALARNGIQANIVQEIGHPATLFPMVAAGIGISILPALALPLP
EGSPLVVKRITPVVERQLMLVRRKNRSLSTAAEALWDVVRDQGNALMAGR
EGDPLYQI
>b2427 yfeT, orf, hypothetical protein
MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQLGISQSS
IVKFAQKLGAQGFTELRMALIGEYSASREKTNATALHLHSSITSDDSLEV
IARKLNREKELALEQTCALLDYARLQKIIEVISKAPFIQITGLGGSALVG
RDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVL
CAEAARKQGATVIAITSLTDSPLRRLAHFTLDTVSGETEWRSSSMSTRTA
QNSVTDLLFVGLVQLNDVESLKMIQRSSELTQRLK
>b2561 yfhH, orf, hypothetical protein
MEYKIHSRVSHIACCRHYFIARKDMNGLLRIRQRYQGLAQSDKKLADYLL
LQPDTARHLSSQQLANEAGVSQSSVVKFAQKLGYKGFPALKLALSEALAS
QPESPSVPIHNQIRGDDPLRLVGEKLIKENTAAMYATLNVNSEEKLHECV
TMLRSARRIILTGIGASGLVAQNFAWKLMKIGFNAAAVRDMHALLATVQA
SSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH
CLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA
LVKKLV
>b2577 yfiE, putative transcriptional regulator LYSR-type
MFLYSRFDIFDRFGVMDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFH
IQQLEQEFSVQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKE
SDPDGELRVVSGETLLSYRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDAL
LNDEADVGVFYRVGNDDALNRRELGEQSLVLVASPQIADVDFTEPGRHNA
CSFIINEPQCVFRQIFESTLRQRRITVENTIELISIESIKRCVAANIGVS
YLPRFAVAKELECGELIELPFGEQSQTITAMCAHHAGKAVSPAMHTFIQC
VEESFVAG
>b2634 yfjR, orf, hypothetical protein
MTQAERRHDRLAVRLSLIISRLVAGETLSVRKLAAEFGVSVRTLRRDFRE
RLMYLDLEYQSGYCRLRTAGSEMQMVPDVLIFAHRSGLAGLFPGLDRRLV
NALLMCDESPCVIAPANPVPSPSGALSFWRLIQAITGRRRVTLIAEGRRC
ERLAPCRLLIHQQTWYLVAEHEGHIAVFTLDEIHLIQPLQETFRRNDSLC
RLVEDPVFIQALPHFRFIQHSLLTFVPADSPPE
>b2709 ygaA, putative 2-component transcriptional regulator
MSSQNDYQSNGRYDNIYSQIDSEAKMSFSVDVLANIAIELQRGIGHQDRF
QRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPR
LEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLI
GALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGD
ATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVA
KAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKF
EMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRCLRVDVRVLA
ATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQ
CRLRQGLSRVVLSAGARNLLQHYSFPGNVRELEHAIHRAVVLARATRSGD
EVILEAQHFAFPEVTLPTPEVAAVPVVKQNLREATEAFQRETIRQALAQN
HHNWAACARMLETDVANLHRLAKRLGLKD
>b2664 ygaE, putative transcriptional regulator
MIRSHTMTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR
EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIA
RGGDEWEADVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGS
HYLLQMRERLFDLAARYRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARD
TARASELMRQHLLTPIPIIQQAMAGN
>b2735 ygbI, putative DEOR-type transcriptional regulator
MSAGQRKEQKLIPVERRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDL
QKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLV
QPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIADYLLDNSNCTIIH
TGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVT
VKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASR
ALVKQDLSLLVAKNE
>b2768 ygcP, putative anti-terminator regulatory protein
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKI
KNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAE
GFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIR
QPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>b2852 ygeH, putative invasion protein
MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHV
VLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYR
FSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKI
DGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIEL
IDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY
KNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL
LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL
SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ
LEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLK
QLTRICMR
>b2855 ygeK, putative 2-component transcriptional regulator
MMGAELVKWVKSHKIDAHIITFVAKMPYIDSIKLLEAGAKGCVWKTSHPA
KLNRAIDSISNGYTYFDSVHMDCEKISSRYSSDNQLTNRESEILQLIADG
KTNKEIANFLQLSRKTVETHRLNIMKKLDVHSGIELIKTALRMGVCTI
>b2869 ygeV, putative transcriptional regulator
MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAGTGAYGK
FLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLG
TPVILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLE
DQGPGDNISKIFATMIDNMDQGVLVVDDENRVQFVNQTALKTLGVVQNNI
IGKPIRFRPLTFESNFTHGHMQHIVSWDDKSELIIGQLHNIQGRQLFLMA
FHQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVG
ESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFT
GASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGAS
SPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED
IELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYL
VNVVPSGEVIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEE
MEKQMIREALSRHNSKKQVADELGIGIATLYRKIKKYELLNT
>b2921 ygfI, putative transcriptional regulator LYSR-type
MRGRGMDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQ
IGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREI
VIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFI
ISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQ
MRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIP
HFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDG
TSH
>b2929 yggD, putative transcriptional regulator
MATLTEDDVLEQLDAQDNLFSFMKTAHTILLQGIRQFLPSLFVDNDEEIV
EYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNE
QDETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFSVWSEARFSG
MVKTALTLAVTTTLKELTP
>b3060 ygiP, putative transcriptional regulator LYSR-type
MLNSWPLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLAT
TLLNRSARGVALTESGQRCYEHALEILTQYQRLVDDVTQIKTRPEGMIRI
GCSFGFGRSHIAPAITELMRNYPELQVHFELFDRQIDLVQDNIDLDIRIN
DEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERD
MTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIMLRSEWDVL
PFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRL
GKPDEGYQVM
>b3021 ygiT, orf, hypothetical protein
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEES
DAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGGGVNAFS
RYEKGNAQPHPSTIKLLRVLDKHPELLNEIR
>b3025 ygiX, putative 2-component transcriptional regulator
MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAPYDAVIL
DLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLC
KPFALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLAGEPLTL
KPKEFALLELLMRNAGRVLSRKLIEEKLYTWDEEVTSNAVEVHVHHLRRK
LGSDFIRTVHGIGYTLGEK
>b3082 ygjM, orf, hypothetical protein
MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLL
DLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPE
IGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID
>b3105 yhaJ, putative transcriptional regulator LYSR-type
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELD
VVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLT
IVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVI
APDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGI
AVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVE
KDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFNGK
>b3239 yhcO, orf, hypothetical protein
MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMNDVLPLP
LEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH
>b3243 yhcS, putative transcriptional regulator LYSR-type
MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDELQVKLLN
RSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSS
TMAQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQD
SSLFSRRLGAMPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEF
ELIAPEGISTRLIPQGRFVTNDPMTLVRWLTAGAGIAYVPLMWVINEINR
GELEILLPRYQSDPRPVYALYTEKDKLPLKVQVVINSLTDYFVEVGKLFQ
EMHGRGKEK
>b3375 yhfR, putative transcriptional regulator
MLLLAGKRPYNPSNSFFISGSIMSATDRYSHQLLYATVRQRLLDDIAQGV
YQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQ
KVENALLTVSGFTDFGVSQGKATKEKVIEQERVSAAPFCEKLNIPGNSEV
FHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEIYVEGSSTYQLFQERFDTR
VVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQNDKPVHVSELF
CRANRITLTIDNKRH
>b3441 yhhY, orf, hypothetical protein
MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQERLADRPG
IKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALM
REMIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNG
EYVDAYYMARVK
>b3512 yhiE, orf, hypothetical protein
MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVIIDTYHN
HILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLE
ITYGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQ
KFNIMYKLKLRRMSDIVTLGITSYF
>b3515 yhiW, putative ARAC-type regulatory protein
MTHVCSVILIRRSFDIYHEQQKISLHNESILLLEKNLADDFAFCSPDTRR
LDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNE
SGVNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIA
KRWYLRDIAERMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQ
IPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGTFS
>b3520 yhjB, putative regulator
MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLESYPEALV
MLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAI
VPRDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREIL
TMLAAGESNKEIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS
>b3521 yhjC, putative transcriptional regulator LYSR-type
MLEKTINNAICALLFRCEQQSVKEMDKIHAMQLFIKVAELESFSRAADFF
ALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNL
SELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPGIELELS
SHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFG
YPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSE
NYLTAGLAGLGIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQR
RELSRRVNLFMQWLAGVMKEYLD
>b3550 yiaC, orf, hypothetical protein
MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAYLANAQN
WVWEEDGKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHL
MLEVYQKNQPAINFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL
>b3555 yiaG, orf, hypothetical protein
MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKGTGLKID
DFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME
>b3574 yiaJ, transcriptional repressor of the yiaK-S operon.
MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSE
LAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNI
IHIAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQ
HMPLYCSAMGKIYMAFGHPDYVKSYWESHQHEIQPLTRNTITELPAMFDE
LAHIRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSISLSTSRLKQV
GEKNLLKPLRETAQAISNELGFTVRDDLGAIT
>b3585 yiaU, putative transcriptional regulator LYSR-type
MTKLQLKYRELKIISVIAASENISHAATVLGIAQANVSKYLADFESKVGL
KVFDRTTRQLMLTPFGTALLPYINDMLDRNEQLNNFIADYKHEKRGRVTI
YAPTGIITYLSKHVIDKIKDIGDITLSLKTCNLERNAFYEGVEFPDDCDV
LISYAPPKDESLVASFITQYAVTAYASQRYLEKHPISRPDELEHHSCILI
DSMMIDDANIWRFNVAGSKEVRDYRVKGNYVCDNTQSALELARNHLGIVF
APDKSVQSDLQDGTLVPCFQQPYEWWLDLVAIFRKREYQPWRVQYVLDEM
LREIRHQLAQSQQLRPEQAAESED
>b3680 yidL, putative ARAC-type regulatory protein
MSIIRRRDIKMNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTY
ADEHYRVIWPRDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCII
FLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQEL
TEVAELITSPEAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIEKLI
ATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKEYYLDARLDL
ALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKHKFGYAPSAVLKNTDQHP
TDASPHN
>b3684 yidP, putative transcriptional regulator
MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRKAIDLLV
AWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEI
MPAPPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSL
QHLEGSKFEYIEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRI
TSLSYSESGEFLNYSVMFRNASEYQVEYHLRRLHPEKS
>b3711 yidZ, putative transcriptional regulator LYSR-type
MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAWF
DDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFE
LAAESPLMMIMLNALSKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGF
SGRESHPRSRELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHQTWNLDTF
LRYPHISICWEQSDTWALDNVLQELGRERTIAMSLPEFEQSLFMAAQPDN
LLLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRNSH
NPKIVWLRETIKNLYASMA
>b3755 yieP, orf, hypothetical protein
MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVS
RTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENF
HQVIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKENFRR
ERWIEVDMAWHEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLD
LHQAIVDAIIQSDGDAAFKACQALLRSPDK
>b3872 yihL, putative transcriptional regulator
MAENQSTVENAKEKLDRWLKDGITTPGGKLPSERELGELLGIKRMTLRQA
LLNLEAESKIFRKDRKGWFVTQPRFNYSPELSASFQRAAIEQGREPSWGF
TEKNRTSDIPETLAPLIAVTPSTELYRITGWGALEGHKVFYHETYINPEV
APGFIEQLENHSFSAVWEKCYQKETVVKKLIFKPVRMPGDISKYLGGSAG
MPAILIEKHRADQQGNIVQIDIEYWRFEAVDLIINL
>b3884 yihW, putative DEOR-type transcriptional regulator
MMVFRGIFMSLTELTGNPRHDQLLMLIAERGYMNIDELANLLDVSTQTVR
RDIRKLSEQGLITRHHGGAGRASSVVNTAFEQREVSQTEEKKAIAEAVAD
YIPDGSTIFITIGTTVEHVARALLNHNHLRIITNSLRVAHILYHNPRFEV
MVPGGTLRSHNSGIIGPSAASFVADFRADYLVTSVGAIESDGALMEFDVN
EANVVKTMMAHARNILLVADHTKYHASAAVEIGNVAQVTALFTDELPPAA
LKSRLQDSQIEIILPQEDA
>b3888 yiiD, putative acetyltransferase (EC 2.3.1.18)
MSQLPGLSRETRESIAMYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGS
ERDAWDAMAHHQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKG
LGTLMAMTLESVARQEGVKRVTCSAREDAVEFFAKLGFVNQGEITTPTTT
PIRHFLMIKPVATLDDILHRGDWCAQLQQAWYEHIPLSEKMGVRIQQYTG
QKFITTMPETGNQNPHHTLFAGSLFSLATLTGWGLIWLMLRERHLGGTII
LADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQMQVEIFGDE
TPGAVFEGTYIVLPAKPFGPYEEGGNEEE
>b3963 yijC, orf, hypothetical protein
MFILWYSASSTFGKDSDIVMGVRAQQKEKTRRSLVEAAFSQLSAERSFAS
LSLREVAREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRI
AKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHF
IAELADYLELENHMPRAFTEAQAEAMVTIVFSAGAEALDVGVEQRRQLEE
RLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE
>b3954 yijO, putative ARAC-type regulatory protein
MYHDVSYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLEIVLEGE
FVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQ
WDGKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLL
SHCRDLLGSQIQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPN
YLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKGYDLKVKEVAHACGFVDSN
YFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE
>b4012 yjaB, orf, hypothetical protein
MVISIRRSRHEEGEELVAIWCRSVDATHDFLSAEYRTELEDLVRSFLPEA
PLWVAVNERDQPVGFMLLSGQHMDALFIDPDVRGCGVGRVLVEHALSMAP
ELTTNVNEQNEQAVGFYKKVGFKVTGRSEVDDLGKPYPLLNLAYVGA
>b4135 yjdC, orf, hypothetical protein
MGKTEENSVQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFW
PDKEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKLLARYQALSECVKN
NRYPGCLFIAACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPA
MVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDILRFARCRQGGALT
>b4178 yjeB, orf, hypothetical protein
MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVKIINQLS
RAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITP
ACRLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE
>b4182 yjfJ, putative alpha helical protein
MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDKAGKSRV
DLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARL
ENLITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQR
AQQAVTTSTVGASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGR
DLDEKLAEAGIGGSNKSSAQDVLARLQRQQGE
>b4191 yjfQ, putative DEOR-type transcriptional regulator
MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLDESGKLK
KVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVIN
CGSTAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQS
ITLSPQGSENSLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGK
LVVLVDSSKIGERAGMLFSRADQIDMLITGKNANPEILQQLEAQGVSILR
V
>b4256 yjgM, orf, hypothetical protein
MNNIAPQSPVMRRLTLQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDE
LYQVYSQPGHAYWVVEYEGEVVGGGGIAPLTGSESDICELQKMYFLPAIR
GKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYA
LGCTGHVDCEVRMLREL
>b4299 yjhI, putative regulator
MVRKGCNSLVRAEKILTHIAWVGMASYMELLNKFQYPKSSLLNLLNVMVD
CGFLIKNKNGYYSLGIKNYELGCQALHRQNIFEVTKRPMQELSLKSGLVC
HLGAMESISAIYLDKIESPDSVPTSKSWIGKKLELHITALGKALLAWKTR
EELDYFLEALTLTPHTRNTFTDKKLFLEELQKTRLRGWAIDNEESTYGAV
CLSMPVFNMYNRVNYAISLSGDPVVYSGNKIDSYLELLRKCAEQISYGLG
YRNENEHLRKGN
>b4295 yjhU, orf, hypothetical protein
MNVFGSIDAALQIRDKFNLQRVIIVPDGEHAGKRDDTKLMRTRLSRAGGM
YLNQVIENGDVLGVAWGRTIHQMSKTMTPKSCKNVTVIQMLGSMPSQPDL
TIIESSSQIAYKLSGRVASLHVPAVVSSARLAMELQAEPIIRSNFDVLTR
CTKAFFVVGNALDENPLIRVGVLNKKEMQTYRDLGAVGVICGRFYDKEGM
PVVADVDQRILGISLAQLRQIERKIFLAGGERGYDATLGALLGGYVTDLI
VDEGTAEFLLACELPH
>b4327 yjiE, putative transcriptional regulator LYSR-type
MDDCGAILHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSRRIRALE
QAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQ
RKIKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDC
IFSFHDEDLLEAPFDHIRLFESQLFPVCASDEHGEALFNLAQPHFPLLNY
SRNSYMGRLINRTLTRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEY
AIQQEIRSGKLVVLNRDELVIPIQAYAYRMNTRMNPVAERFWRELRELEI
VLS
>b4340 yjiR, putative regulator
MTRYQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTL
ETMKLITPQPRSGYFVAQRKAQPPVPPMTRPVQRPVEITQWDQVLDMLEA
HSDSSIVPLSKSTPDVEAPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRV
LREQIARLMLDSGSVVTADDIIITSGCHNSMSLALMAVCKPGDIVAVESP
CYYGSMQMLRGMGVKVIEIPTDPETGISVEALELALEQWPIKGIILVPNC
NNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWD
IDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQM
AAATFVLEGHYHRHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGF
LLWIELPEQVDMVCVARQLCRMKIQVAAGSIFSASGKYRNCLRINCALPL
SETYREALKQIGEAVYRAME
>b4357 yjjM, orf, hypothetical protein
MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTTVRHILS
HLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTMIN
QRQLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIHSEKRGQWSMK
QFDQSYAEQLFELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRD
NIGNSFRMFSQLDRDFHSLLLSAADNIFFDQSLEIISVIFHFHYQWDESD
LKQRNIIAVDEHMTILSALICRSDLDATLALRNHLNSAKQSMIRSINENT
RYAH
>b4365 yjjQ, putative regulator
MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDLTLLQLR
RSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVEL
LMCPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMTETHDFSYR
SVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHS
NAEMYAWINSAQGARELNLPSVYGDAAEWNTAELRREMSHS
>b0300 ykgA, putative ARAC-type regulatory protein
MRYDKELTENEMIRQKILQQLLEWIECNLEHPISIEDIAQKSGYSRRNIQ
LLFRNFMHVPLGEYIRKRRLCRAAILVRLTAKSMLDIALSLHFDSQQSFS
REFKKLFGCSPREYRHRDYWDLANIFPSFLIRQQQKTECRLINFPETPIF
GNSFKYDIEVSNKSPDEEVKLRRHHLARCMKNFKTDIYFVSTFEPSTKSV
DLLTVETFAGTVCEYADMPKEWTTTRGLYDPTHVIWTQA
>b0305 ykgD, putative ARAC-type regulatory protein
MDALSRLLMLNAPQGTIDKNCVLGSDWQLPHGAGELSVIRWHALTQGAAK
LEMPTGEIFTLRPGNVVLLPQNSAHRLSHVDNESTCIVCGTLRLQHSARY
FLTSLPETLFLAPVNHSVEYNWLREAIPFLQQESRSAMPGVDALCSQICA
TFFTLAVREWIAQVNTEKNILSLLLHPRLGAVIQQMLEMPGHAWTVESLA
SIAHMSRASFAQLFRDVSGTTPLAVLTKLRLQIAAQMFSRETLPVVVIAE
SVGYASESSFHKAFVREFGCTPGEYRERVRQLAP
>b0294 ykgK, putative regulator
MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLI
YLSLEKIRKDFVFINLSTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEA
LANYWYYNSNIRGVVYAGLSRDIRKELVYVINGRFLRKDIKKDKITDREM
EIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ
>b1145 ymfK, putative lambdoid prophage e14 repressor protein
MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGATKNIGD
SMARHIEKCFDLPVGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQA
GAWKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIF
VDPEVPACHGDDVIALMHDTGETTFKRLIEDGTQRYLKALNPNWPEPYIK
INGNCSIIGTVIFSGKPRRYKIKA
>b1365 ynaK, orf, hypothetical protein
MSEKLKIVYRPLQELSPYAHNARTHSTEQVAQLVESIKQFGWTNPVLIDE
KGEIIAGHGRVMAAEMLKMDSVPVIVLSGLTDEQKQR
>b1450 yncC, hypothetical transcriptional regulator
MNSFCHAGRVGQKTREGIKMPGTGKMKHVSLTLQVENDLKHQLSIGALKP
GARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQAFTVPEVGKRQ
LDEINRIRYELELMAVALAVENLTPQDLAELQELLEKLQQAQEKGDMEQI
INVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELREH
IENYHLLLAALKAKDKEGCRHCLAEIMQQNIAILYQQYNR
>b1526 yneJ, putative transcriptional regulator LYSR-type
MDLTQLEMFNAVAEAGSITQAAAKVHRVPSNLTTRLRQLETELGVDLFIR
ENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTA
AVRIPATLAEFNRRYPKIQFSLSTGPSGTMLDGVLEGKLNAAFIDGPINH
TAIDGIPVYREELMIVTPQGYAPVTRASQVNGSNIYAFRANCSYRRHFES
WFHADGAAPGTIHEMESYHGMLACVIAGAGIALIPRSMLESMPGHHQVEA
WPLAEQWRWLTTWLVWRRGAKTRPLEAFIQLLDVPDSARQGYQ
>b1595 ynfL, putative transcriptional regulator LYSR-type
MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLL
ARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFT
SSAPFIRAVSDTLSLFRRDYPDVHLQTREMNTREQIAPLIEGTLDMGLLR
NTALPESLEHAVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPH
VGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAGLGVSILPASFK
RVQLNEMRWVPIAEEDAVSEMWLVWPKHHEQSPAARNFRIHLLNALR
>b1808 yoaA, putative enzyme
MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTG
KTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALL
KGRSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVS
VAEDSQAWPLVTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHL
FLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQSLSSRQLLDL
AKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLA
NPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLK
EINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLS
VNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVLRNLPQTNQPGSAR
QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSK
GQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLL
KARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR
LVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSSR
>b2381 ypdB, putative 2-component transcriptional regulator
MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQHNRVDAI
FLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYIL
KPYQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVT
PINDIYYAEAHEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFC
VNLNKIREIEPWFNNTYILRLKDLDFEVPVSRSKVKEFRQLMHL
>b2382 ypdC, putative ARAC-type regulatory protein
MKAPGLPADQQFFADLFSGLVLNPQLLGRVWFASQPASLPVGSLCIDFPR
LDIVLRGEYGNLLEAKQQRLVEGEMLFIPARAANLPVNNKPVMLLSLVFA
PTWLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQ
NIIQPLVLSLLHLCRSVVNMPPGNSQPRGDFLYHSICNWVQDNYAQPLTR
ESVAQFFNITPNHLSKLFAQHGTMRFIEYVRWVRMAKARMILQKYHLSIH
EVAQRCGFPDSDYFCRVFRRQFGLTPGEYSARFQG
>b2550 yphH, putative NAGC-like transcriptional regulator
MKMRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAVSNIL
QELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVA
NACLSPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDHTINLALAIH
GQVDPVTGVSQTMPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEK
WQNNSQERDFCVINVDYGIGSSFVINEQIYRGSLYGSGQIGHTIVNPDGV
VCDCGRYGCLETVASLSALKKQARVWLKSQPVSTQLDPEKLTTAQLIAAW
QSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYGRSCAFGENWLNT
IIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEAQLRQI
>b2846 yqeH, orf, hypothetical protein
MTSSITNEIMQLYTDREVLNMGLCSRYKSLTCNSCSMHCQIMPEESPRLQ
YCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLF
LEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDV
ANEKIRQLFIGRYLSFTGGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDI
RSIYAYKQRIEKRMGGKINELFIRSHSVQH
>b2847 yqeI, putative sensory transducer
MYWIINDNIEFWPEHRKLISVHNADLNVVLTTPASRCLSLLLEAFPDVVA
QQDFFTRVWEEEGMRVPTNTLYQNISIIRRGFRAVGDTTHSLIATVPRRG
FKIHNDINIQNHVINSSTDAHTHNAPPAIKVNAGYKESIGGAKNFNNKIL
KHIKSHLIMLSAFVIGAYSAYWLWNNNQPKPFFKDYKTVAEINGCHFNVT
EDTIDGLKEFDKYKTRILDSGINCKKHPWLYFPLAKSSPGMIVMACNKNY
NQHEVANCLTLSYREVNRD
>b2915 yqfE, orf, hypothetical protein
MHFAQRVRALVVLNGVALLPQFACKQGLANGELVRLFAPWSGIPRPLYAL
FAGRKGMPAIARYFMDELTTRLANGV
>b2948 yqgE, orf, hypothetical protein
MTAPFFPRILGAVAFLNQETEPLTMNLQHHFLIAMPALQDPIFRRSVVYI
CEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGG
PLAEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLV
ALGYASWEKGQLEQEILDNAWLTAPADLNILFKTPIADRWREAAKLIGVD
ILTMPGVAGHA
>b3010 yqhC, putative ARAC-type regulatory protein
MRVGVCRLKLFITCSLCWANMRAENDLPDVFHCDRQRPGSQCSFLPMSCL
FLQSAGEMLQNCAQSNCRIIPKKLRDMKREEICRLLADKVNKLKNKENSL
SGLLPDVRLLYGETPFARTPVMYEPGIIILFSGHKIGYINERVFRYDANE
YLLLTVPLPFECETYATSEVPLAGLRLNVDILQLQELLMDIGEDEHFQPS
MAASGINSATLSEEILCAAERLLDVMERPLDARILGKQIIREILYYVLTG
PCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEANMSVSAF
HHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQF
SREFKRYFGVTPGEDAARMRAMQGN
>b3071 yqjI, orf, hypothetical protein
MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCGGRHGRG
GGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVI
YPTLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIK
ARCVGAALRQNPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAA
FDITQLD
>b3190 yrbA, orf, hypothetical protein
MIEDPMENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVKK
QQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF
>b4205 ytfA, orf, hypothetical protein
MHSENQSKGVHYAKSQRLLEINHAHLQLMESLLDEGKKHNIFKPDIDPLQ
VNINIAALGGYYLINQHTLGLVYHISMVSPQALEARRKVIKETILSWLLV
DPSSTAHE
>b4212 ytfH, orf, hypothetical protein
MGSLHRFVLCLNTLTPKLTFSKYVQKGKYEMSQVSLSQQLKEGNLFAEQC
PSREVLKHVTSRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQAL
EQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAV
RDERAA
>b3292 zntR, Zn(II)-responsive transcriptional regulator
MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESDLQRLKF
IRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAEL
QSMQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC