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# Pseudomonas fluorescens Pf-5, Pf-5

>PFL_5864 transcriptional regulator, TetR family
MAPRIKTRERIVQFSLELFNQQGERNVSTNHIAAHMEISPGNLYYHFPNK
QAIIAVLFAEYESLVDSFLRPPPGRAVTVQDKRYYLQALLAAMWRYRFLH
RDLEHLLDSDPELAARYRRFSQRCLIQGMAIYGRFVDAGIVAMDKVQIES
LTLNAWIILTSWVRFLCTTRENSTHLSEEAIKRGVYQVLVLEAGFVTDQA
REAVNGLFEEFYVPLAQALEEVQ
>PFL_3823 DNA-binding response regulator, LuxR family
MTAVIRLVLADDHEVTRTGFIALLAGNPEFEVVGQARDGEQALALCEQLR
PDLAILDIRMPLLNGLGAARLLQQRQPEVKVVIFTMDDSPDHLEAAMAAG
AVGYLLKDASREEVLDALQRVARGEEALNSAVSARLLRRMSERGNGQAPQ
AQALTARERQVLGLVAGGFSNREIGEKLGITTGTAKAHVERVIGKLGAAD
RTQAAVRGMALGLVAQPAGQWP
>PFL_2707 DNA-binding response regulator
MTPRVLIVDDDPLIRELLQAYLSQEGYDVHCAATAEQAESFLGQHTVDLL
MLDIRLPGKDGLTLTRELRVRSEVGIILITGRNDDIDRIVGLECGADDYV
IKPLNPRELVSRAKNLIRRVRQASPPQAPANSPSPVKQFADWALDTDRRR
LIDPRGAETLLTHGEYQLLSVFLRNSGHTLSRDQLMDQIRNREWVPSDRS
IDVLVGRLRRKLHDDPAEPELIITIHGAGYLFTASVAA
>PFL_0971 acetyltransferase, GNAT family
MTAAPGLWQDGRLTPGNGHSMLIRKAHGADAQRVFDIRNQAINQQCAGHY
PEADLQVWTAGELSDYFIEVVENTGHVAVIDNQVTASGMLDLETGQVDAV
FVDPAYMGRGIGRKMMEYLEERALEAQLPHLILDSTLNAADFYRRCGFVG
ERIAQYQSPRGLTLACVPMIKHLAR
>PFL_4540 transcriptional regulator, AraC family
MTVSHWHGELWLSRDFGLIHGAMGPTEPHAHYAHQLIIAPGQPVTVALAG
GLQSAHYLLIPALQRHAIVQAPEQAFTVYAEPLLIAVEDLQACVSGAAPS
LPGLEAALRRCPRQPVADPRVARALHAVDAALEGKVAAAQLAARAHVSLS
QLERLFARDVGLPVRRLVLWRRLRLAMALVLEGQTHTGAAHGAGFADSAH
FSRTLKSLFGVTASQALKHLKPRLLV
>PFL_2987 response regulator
MPAEHVPKPYTLLAIDDDPQSLIVLSKTLTAEYEVLLAKNSERGLALARS
ASPDLIILDILMPEMDGFQVLSELKSHPATAAIPVIFLTSRSSVEDERLG
LLLGAADYIAKPISPPVVLARVATQLGYRNKPLHDLQAVAGPCAGSDMRD
GFVSALTLQLAGNPQIRLQALLDTLSILLRSSPSRRDPAALRSAACLALM
GLNQPGSRIDQALGHSRLLIEEILAHAEPEDPILNLAWKITHADALLKGP
GELDTCERLSLSARLFALALNYHLSLLQASTEDLHSRHAQAMGQMYRQPG
FEQCIAGDPEPLSAALLSSSQSFFGR
>PFL_0145 RNA polymerase sigma-70 factor, ECF subfamily
MLSIMCAVSFMQATTDGNAQLHRLYQDHHGWLQGWLRKRLGDREHAADVA
QDTFLRLLLSGRFPGQQESRSYLAQIARNLVVDQWRRARIERAYLESIAH
LPEPQTPSLESRALILETLMQIDAMLDRMPDKVRQAFVMSQFEGLGYAQI
AERLEVSVSSVQKYMTRAIQACYQVLYAE
>PFL_4890 transcriptional regulator, LysR family
MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGMPLFV
RKTKPVRFTSAGLRLLQLADATLPLLRGAERDISRLAGGTAGRLHMAIEC
HSCFQWLMPTIDQFRDAWPEVELDLASGFSFAPLPALARGDLDLVVTSDP
LELAGITYVPLFTYEAMLAVANQHPLASKPYVVPEDLLSETLITYPVERD
RLDIFTRFLEPADIEPAQVRTSELTVMMMQLVASGRGVCGMPHWALHEYS
SRGYVKAKRLGEKGLFATLYAAIRADMLDAPYMRDFLLTAKDTSFSTLDG
VSAVR
>PFL_2643 acetyltransferase, GNAT family
MPSTALDTLAHPPFPAQQGQYWIDALNDGSHVLIRPLRPQDREREKAFIE
NLSPATRHQRFLGEIKEVGEQLLNQLMDVGTPQRVAYVALVHDNGELREV
GISRYAQVDEQPSHCEFAVTIADEWQGKGLGALLMQHLIDEARNNGFQQM
YSVDSAANYSMRRLAKQLGMRSAIDPDDATQVIHSLAL
>PFL_2438 acetyltransferase, GNAT family
MSDQQPAVTVRAIQPGDYQQWLPLWLAYQDFYQVTLSEEVSRRTFERFLD
SREPMYSAVAVQGDEVIGFVNLVLHRSTWAVGDFCYLEDLYVAPSIRGSG
AGKLLIEWVQAFARQHQCARLYWHTQESNKRAQRLYDWVAHKPGVIEYRM
EL
>PFL_3582 transcriptional regulator, IclR family
MSEDNIKRRAKGLDRAFDILDFLKEVGQPLRPNDIAKGIGGPKSTVYELV
ASLLERRVLEPVGQEGHVYLGRQLYFLGQAHLRHFDLSREADQALQEIVR
QTQETAQMCLLNGRKYTVALMKEGERHFRISSNIGENAPIPWTASGRLLL
GHLSDGQIVDLIDERDFVLPDGERLPLETFLKQIRQATEDGFFSFDSVAD
TFTHCFAAPVRDEHGVCICTLCIVAPRADAQRNYQQYRRVLIDSANRLAR
RIND
>PFL_2363 RNA polymerase sigma-70 factor, ECF subfamily
MHNHSLSSPVAQLYANHHGWLRGWLHRRLGHSADAEDLAHDTFIRVLRSQ
EDVRELRQPMAFLATIANGLLINRWRRQAIERAYLEALAARPVGEEPSPE
ERHLMIETLLQLDSLLVGLSSRVRQIFFLSQLDGLTYPQIAAQLGLTVAQ
VQRAMGKAFSVCYASRFE
>PFL_3509 transcriptional regulator, LysR family
MDQLGAITMFVTTVDQGSFTRAAACLGKTTSALTKAVSHLESQLGTRLLE
RSTRRIALTEAGHIYLASARQVLRQLQQAGEDIERLQQEMCGTLRLVAPP
SFAPAFLNGACYGFLEQYPQMRLDVELTDEFVDLQSGGYDLAVRDGPVEL
PDLIARPLTANRILLCASPRYLQRQPLPVTPAHFAEHDWLIFRHPALNPH
FWRFTLNGEQQRVPQPVPRLASDNYDFLFGALLAGLGLQLCPQWSAAPYL
RRGELVQLLPEAQLDPEQFGPRIHVIYPAHRRQTRKHQAFIECLNRYLDE
QQLH
>PFL_1538 transcriptional regulator, LysR family
MTVSENFHGQLHRVQTFLAVVDFGSYTRAAQYLGISKAMASLHIKALEQA
LASTLLIRTTRQVTLTETGQALYDEFKGIVANIDTAFDNVLHGRDRVSGK
LRISSTAEYAETFVLPILPLFTARYPEVRLSYHFNSSLNDLVAEKLDLVI
RLGHLADSGFKGRQLADYAIVLVASPALLKDRQVTQPEELDAWPWIGNSN
LGGPPGWTFSHPRRGEVEVKVSPGHESNSATAIRAMALAGLGLAVLPEWM
VLDDLGNGRLVRVLPEYRLATQPVHVLFPNSAHLPRKSRVFIDFLAEHLG
H
>PFL_2344 DNA-binding protein
MDTGTRLKLVRESYKLSQRELARRSGVTNATISLIEQNRVSPSVSSLKKL
LEGIPMSLADFFTFDQPPREHQYVFRANEQPDLGRDGLRLLMIGAPVANR
QMRFLREQYAPGASSGEEAIVHAEGEECGLVTRGTVELTVDGQVSVLNPG
DGYYFPTTLPHSFRNIGQDEAEIISANTPANF
>PFL_2347 transcriptional regulator, LysR family
MNLDVLNNQHSDEIAAFLAVASQGSFVAAGRLLQRHPTIVSKRLAAMEKR
LGVRLVERSTRQVRITQVGSKLEERLRAAIDLMDAAQQQAAEGANEVRGT
LRLALPAAMGRRWLGPMLPEFLRDHPHVSILADYSERLVDIIDEGFDVAI
RIGELEDNRLIAMQLSDHRRILCASPAYIEKHGMPETPHDLIEHNCLRFS
GLASFPQWKLYRGSEFQTVLPKGNLTANDSESLLAAACADSGILGAGEWL
MRHDIAAGKLLHVLPDWQLDTAGGVYLVRPSSKFPSAVVTAFKKWVESKF
IPAPPWAI
>PFL_6160 transcriptional regulator, RpiR family
MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPT
IVRFCRAIGCSGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFD
TTLHTLMEVREKLDPVALQQAVTAMSQAQRVEFYGFGASGAVAADAQHKF
FRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRE
SGASLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSRIAHLVVIDVL
AMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSVKALDD
>PFL_2694 transcriptional regulator, AraC family
MECWNPYLDTQFCFDRPVGLARAGVFDPSARRVMGSAVGHYRARTVRPHL
QYFDCDLQFPDPLSIHKVLPDSLCIVQVLAGQWQHRIDGQLHHYTPGAPQ
ALGLSETMEALDQMPAGSHARMAGLRIAGSYLRELAEEDPTLQPLLGLLD
DGIRFRQFQRCRALGSLLERLYQAPYQGALQRLHQESLSLAVLVELAVHL
QGQRSAAPTVRGQLDLAHEARRQLDAHLLDPPGSQALAQQLGVGETTLRR
AFAQVFGQSMLQYVRRQRMELARTLLRQRKWHVAQIAYRLGYANPANFNH
AYKAHFGHPPGAEG
>PFL_5475 acetyltransferase, GNAT family
MRITQATLEHLDLLTPLFVKYREFYGALPYPDSSRAFLEKRLRRKESVIY
LALADDDSNKLLGFCQLYPSFSSLSLKRVWILNDIYVAEDARRQLVADNL
MRTAKKMAKETNAVRLRVSTSSNNEVARKTYESMGFREDTEFKNYVLPLS
DD
>PFL_3627 transcriptional regulator, LuxR family
MGRYTRRSPEIEFKRVNIPSKLCDEIRTELERETNHTEFSFILRSDLKSH
SKVVYNIDSYSYAWRRDYEAEKFWIVDPILKIHSPTPYFPTIWSDDFIES
KLFLQAGKDYGFLSGMSIGLPCSFGNYGVLSIASLKQGSLQGVDPLDWSA
CVLKVYAKLIDYINRQHSLQRIFNDHQQALNDREIDILRYTADGMSSTDI
AMRMHLSKSSIDYHIAKILQKLDSPNKHQALALAIKKGKI
>PFL_2446 DNA-binding protein
MPVPDSGRAAMPCTLEAPRAGPLPVGAQLRQLRRQARLSQLDLALQAGIS
QRHLSCVETGRAQPSPALLDALLTTLDTPLPQRNRVFLAAGYAPRYAALP
LADPGLAPVRAALMHLLKANNPAPAIVIDSGWQVLAANQATAALFQLLGL
SQHAMEQGFNLLTALLEPGGFGDCLINAEEVRQVAWQRASREAMGDPGLA
ALLAGLPFPGESPATPSPAEPLLLTRVRGPGGELRFLSTFTTFGMPQDIT
VASLRIEHLIPADEPTWQALTLACERPGELEPG
>PFL_4148 transcriptional regulator, TetR family
MRYSASHKQETRERLLQSSAAQAKNEGFSTVGVDALMKAIGLSGGAFYSH
FTSKDELFSSIVERELSQSLARLGGEGQQNQEKLRRCLKQYLSVAHLQQP
GAGCALPALGAEIARGSLEVRQEAQDWICRLHQAWAQTLGSESLAWSILS
QCVGALVVARMLVNPAIQHQVLASSHEQIIGQLERLPAS
>PFL_3979 transcriptional regulator, LysR family
MDWLGSIPVFMQVAETRSFTEAGRLLGVSSSAVGKSIARLEERLETRLFH
RTTRSISLTAEGAGFLERCRRIAAEVEAAEFQLCDSSSAPVGKLRVSAPQ
VHGLLMPVLAEFMQRYPQIELDIDLSDRMVDVVEEGFDLVVRTGNPKDSR
LLARQLGRFRMVLVGSPGYFQQRGVPQTPQELRSHSCLRHTFHHTGKLEA
WPFKVQADAPEPVLPTRLTSSSIEAVEHAARSGLGIACLPDFMVQAAVRR
GELQTVLDPYLEHNGAFWVLWPSSRHAAAKLRVLIEHLSERLFPANSGQ
>PFL_1052 conserved hypothetical protein
MKRQQCYSCGAPTGMLAFEQRSELIDYRHLQRHLHGLAGWECQECGEIEF
DAASAERYAAAGDQLLEDYRQIVAADMKRIRRKLHLSQKEAVRLLSGGGH
NAFSRYERGEVGAPQPLYMLMRLLDRHPQLMKDVLELSEPQLVPSALSDQ
PEPQLGAAGR
>PFL_3324 response regulator
MEDPQPVEPGRRPRVLLVDDEESILNSLKRLLRPEPYDVLLANSGARALE
ILAEGPVDLVMSDARMPGMDGAALLARVREKYPAVRRILLTGYADLNTII
KAVNDGQIHQYLSKPWNDEELLLILRQTLEHQLAERELKRLQQLVLEQNQ
QLKASNASLERHVASRTAELQQTADMLDLAYEELKHSYVTATEVFSLLAN
LRLPADKQTNRKIIELVRACCKRYGLDEASSRDLTMAAALYNIGKLSWSD
AMLLAPADLLRHTDQARYRAYPEQSESVLMALEPMQDAARLILHHQERWD
GSGFPQRLKGEAIPWGSRLLKLAVDFIELQCGLILERHMNSDEALLFIRK
YAGRLYDPNLVEDFVQVCAAYQSDVTVDDPTVRVLGTRELQAGMVLRRNL
NADNGMLLLNAGKVLSEPLVQKLIAFEAMEGARYSIFVSVPDA
>PFL_0502 transcriptional regulator, DeoR family
MRPNERRQHILELLRQRERISVEELARITATSQETIRRDLSDLAESGLVT
KFHGGAALPPTGEHENTFQTRMNEHAQEKRAIGRYAAGLFCAGDSIFIDT
GTTTLFFARELAQHTRLTVITNSLPIAGCIGESGNRVFMIGGEYRPDSTQ
NVGTLALEQITRFNAEHAVITIGALNEDGAMDFSIEEAEVARAMIAQARQ
LTVIADSSKLERRGLFKVFPLERIDRLVIDRQPGPELLAALEKAGVEVHL
VPQP
>PFL_3780 transcriptional regulator, Cro/CI family
MKIRRPLTPEEVAESAKLKAIYEQRKSAAKAAGRNLTQADVAEACGWSGQ
SAFSQYATGKVPLNVEALLKLAKALNFDASEVSSRLISTVANVQQERIQP
DIKLGTIETWDDATPLPDDEVYVPFLREVELAAGSGRFVIEESDTAKLRF
FKSDLRRNNVQFSNAKCVIVRGNSMFPVLRDGATVGVNTGKNSLGDIVDG
DLYAINHNGQLRVKQVYRLPTGLRLRSFNRDEHPDEDYTFAEAQEQQISI
LGHVFWWGMFAR
>PFL_5920 transcriptional regulator, AraC family
MGRSVAVLVFPGVQALDVTGPMDVFCEANRFLPAEDHYRLRVIGVEAGAQ
ACSNGLLLQAHCSFTQALEPFDLLLVAGGPQVPGSQFSPAFYAWLREACA
RAKGFGSICNGAFILARAGLLEGRTVTTHWSDAPALAALCPGTRVEADRL
YVQDGRLFTSAGVTAGIDLSLYLLAQDHGAGVALSVAKRLVVFTQRTGGQ
SQFSPFLLPQAETTSTVARVQQHVQDRLQADLSIAELARAVNMSPRNFAR
VFVREAGVTPAEFVEGARMDAARGMLERSAAPLKAVAYACGFRDAQHMRS
VFNRRLGLTPQQFRLNFSTVPL
>PFL_0339 conserved hypothetical protein
MPAILQGPALLSRFQALDRFLLEHQALWRPRPFNHLQLPWETAHPELAQW
LRQRSLEDAEAAHNHPEQLQAPAPFTPLAEQARALGAVGELPIKALPAPH
PRLNVDVPGRKWQQIEAFAACLQFDRTPTHWLDWCSGKGHLGRRLLQPEQ
QLTCLEYDPALIESGEQLSRHHGLPARHLQQDVLADDTALRLHAEHSPVA
LHACGDLHVRLIQLASQQGCPQLAIAPCCYNRTRASHYQGLSTAAQASPL
DLSLEDLALPMSETVTAGARVRRQRDTSMARRLAFDLLQRQVRGLDEYLP
TPSLPSHWLDKPFADYCRDLAALKDLSTVDCQDWAALEAAGWQRLAQVRN
LELLRGLFRRPLELWLVLDRGLFLQEQGYAVRLGTFCEAPLTPRNLLLLA
ERP
>PFL_6148 transcriptional regulator, GntR family
MNSAVPPLSFNPAGIELDRRQGLSRQLYQALRQRVLDGRLASGTRLPASR
DLAAALGISRNSVVRAYDQLYAEGFIEGRVGDGTYVAQLPETRLPIKKLS
TKVSTGFSTGLPTGLSTKQAEMAGDLSSKVIHSSGWQRLQTHHLSTPPKG
PPRAFRVGVPAFDLFPFEVWAKLYAAFWRRPDLGQLCYGDSAGDPRLRSL
IAAYLRSARGLNCTAEQIVITSGAQQGISLCAQLLVEPGDKVAVENPGYR
AAGHAFALAGAQLQGVAVDQEGIDCRQLEQLDSCRLAYVTPSHQYPTGVI
MSLARRLELLAWAERSQGWIIEDDYDGEYRYSGAPLAPLAALDRQGRVIY
VGTFGKVAFPALRLGYLVLPPTLVQAFAQRRAVDVRHSEVSTQVVMAEFM
AAGHFQRHIRRMRRAALSRRNTLLAAWPQAIGGVGPLPGVAAGLHLTVRV
DSLAREQELLAQAASVEVEVAGLSSYWLPQTTLPEDQRAGLVLGFAAVPE
ADIQAAVSRLRQAWRA
>PFL_0988 RNA polymerase sigma-70 factor, ECF subfamily
MMSTLPPEPAEGDHPDPQGSRAHFLQVFLSQRSQMEALVSRRVGCRATAA
DLVQDLFLRFWRRPLVQVEELSTYLLRCAGNIAIDHLRSEGARVRVNEGW
LPEQQDNQGSEPQAALEAGNDLRHVEAALRSLPQRTRQIFLLNRIHGRKY
AEIAKAMGLSQSAVEKHMMRALEACKASLREAPGTRTPRNAP
>PFL_2133 transcriptional regulator, LysR family
MLDLRKLRYFLTVAEELHFGRAALRLHLAQPPLTRQISALETELGFRLFD
RTSRTVTLTAQGRHFLPYARAVLEQVDLAQVMAGKLAAGCAGQLALGYAS
SIALSDLFSQAIQAFAQRFPDVQLTLVEGASVSQWSQIVDGRIDIGMSRM
QPPSEQSDIQSLSLGDEPLVAAISSDSPLAAQAQVTLAELSEHPLILFPA
DYGSGLNEAIEQLYRRNGLPLRPGPSGRQITSIIALVAAGQGIALVPRCT
QTLAKKGVTYRPLADPSATAQLLVLTRKQGRSQLVEAFMGVLDELLQAQP
AAAGL
>PFL_5029 helix-turn-helix domain protein
MHYDYKEMVRHLMHRRERTEYLKSNIKYLIKSRGETQLSLCNASGLTRTT
IYNILEGKVSNVQQSTIRKISDFFGISYEEIETVDFEEKEIIESSISPQG
NMNPAAVPILKESQLMANMDKRIGELATCFPLTYYFGTSCNLIAVRLEND
IKGMYEVGGLLIVQKGTITDEKEKLAYDKQTRKLLIMNEVVFDPDRISVV
GDIIEERFNDCL
>PFL_0224 transcriptional regulator, LysR family
MLDPVLLRSFVAVADSQNFTRAAERLHLTQSTVSQQVRRLEESLGCQLLD
RDQRRVVATVEGERLLAYARRILALHEEASDMLVNQRGEEVLRLGVPEDF
AAERLMPMLSRFGLDYPAVRLEVSSGLGPELLRQYRRGEFDLLLVKQMGH
SDDCVDSWPEPLCWVDSVRQPAFGRDPLPLVAFPVGGLYRQEMLHHLEVG
GWPWRIAYSSASLASVCSAVAAGLGISLLPVRVLGKGHRVLDADSGLPDI
QGVRLALYAGSGLSRAGKELQEQLRAVASVKPQVARR
>PFL_4997 DNA-binding response regulator
MSRLLIVDDDIEVLALLKKFFVQQGYQVVVATDGASLWAALEREVPDLII
LDLMLPGDNGLTLCQRLRQQHATPVIMLTAMGELSDRVVGLEMGADDYLS
KPFDARELLARVRAVLRRAGENRPVSADVPRPLIKFADWQLDLTRRELRS
PDQVMIPLSAGEFDLLLVFVEHPQRILTREQLLDLARGQAHDAFDRSIDV
QVSRLRRKLEFDTKRPAMIRTVRNGGYLFTPSVTRQ
>PFL_1575 transcriptional regulator, LysR family
MANALPDLKLLRIFVSVVRHQGFANAQHELNLSTSAISTYMSQLEASLGL
VLCHRGRGGFSLTSKGELFHQETLRLLGELEGFEQYAAALKGELRGTLNL
GVIDSTVSDKALPFAEAIGAYSQEHPAVHLHLSVMSPHELQLGVQDNRLD
LAIGAFSTRMSGLVYMPLYREQHWLYCSNRHPLYSERRIPEQVITQQRMV
GRGYWSQAELARHGFKHSAATVESMEAQLILVLSGAYIGYLPEHYAQAWA
DKGDLRVLLPATFGYQAPFSMIMRRGRGREPLIQTFRDLLKAQLNQS
>PFL_5830 Uncharacterized ACR, COG1678
MSAGPATATLALMKNVSPSYLKHHFLIAMPHMADPNFAQTLTYIVEHNAS
GAMGLVVNRPQDLNLADILEQLRPDQEPSLLCQHVPIFSGGPVQTDRGFV
LHPNGPVYQATVELEGLSLSTSQDVLFAIADGVGPAKSLIALGYAGWEAG
QLEAELADNAWLTCPFDADILFNTSSELRLEAAARHLGVNLSLLTSQAGH
A
>PFL_2807 transcriptional regulator, TetR family
MRVSKAQAQANREHIVETASELFRERGFDGVGVSDLMAAAGFTHGGFYKH
FGSKADLMAEASACSLAKSLAGVQALDVPGFIDVYVTREHRDGRGSGCTM
AALCGDAARQSDDVKATFAEGVEHTLQTLGDKYPTRPDAAPEEGRRKMID
LLSRAVGAIMLSRACPDDSALANEILEVCRAEMFASLPVDKGESA
>PFL_3196 DNA-binding response regulator, LuxR family
MEKLKVVIADDHPIVLLGVRELMERDERFEIVGETLSSQGLIQKLESCQV
DVVITDYNMPGDSPYGDGLKLVEYLKRNFPHVQILILTMISNQLILTRLR
ELGVVGVIQKSQLHEEIQIALKAIAQKAVYRSLEPAPNSVLESNVAIDER
ISTLSPKEFEILRLFVSGKSVSEIARSQNRSAKTISAQKISAMRKLEVQS
DQDLLTYCIGRNIFN
>PFL_5751 transcriptional regulator, AraC family
MSQDFYFLLMPGFSAIGFISAIEPLRVANRFRGELYRWHVLSADGGAVLA
SNGMSVNVDAALEPLKKGATLWVVAGFEPLKFLTPALEHWLRRLEVEGVT
LGGIDTGSVILAESGLLEGHRVTLHWEAIEAFKESYPQLSVTQELFEIDR
RRITCAGGTASIDMMLDLIAQAHGPQLAVQVSEQFVLGRIRPRKDHQRME
VASRYGISNKKLVQVIGEMEQHSEPPLSTLALAESIKVTRRQLERLFRLH
LNDTPSNFYLGLRLEKARKLLRQTDMSVLEVSIACGFESPSYFTRSYRAR
FVRCPREDRRPAGGGRELA
>PFL_6201 transcriptional regulator, AsnC family
MPNMKLDAYDRKILAALQRDGRLSNVQLAEEIGLSPSPCLRRVRMLEEAG
VIRGYQATLDRDEVGLGLTVFVGVKVERHNDAEAEAFRQAVLQLPEVISA
FLVSGESDFLLQVVVPDLRGYDRFLTGHLLKIPGVSDIRSNFAIHTVKTP
GPLPLGHLPG
>PFL_3982 transcriptional regulator, putative
MRELDRIPRDPAKGMAPRFHRGRLGEVLQRFLDDQNTGPQQDYNLLQLEQ
LWRAAAALEPAIGLKLFERFTPQDWHVIAHASLYCPDVAASMAFWVRYAP
LGSDTDRVQLVTDTRGAGVEVDIDTSAPLGRYLIEHYGVMSITQLRRGTG
LAVQPVLACFSHPRPAYHAQYHHWFGERIEFDCPANRFYFDPQTLQLPLQ
TRHAGMLELLSEELDRRVALHRRQSGWAAKVAAACRQALAAGHSPTLESL
CAQLHQTPRTLRRRLDEQGLSFRELLDQTRAELEMHLQLQGESRAQIALQ
LGYNDQAAYLHARKRWKNALG
>PFL_1487 transcriptional regulator, LysR family
MLSANPRPGHLIRTIVPLASIRFARHRRQVLSGMERMLISNVLRKLDMQD
LMVFIAVYEQSSVTGVSETLCVSQSTVSYCLKKLRNGFEDELFINTRTGM
RPTYKATSMYNHVLRILESINLCHSGVPAFDPTRQAVTFNLCAPEYFELL
ILPRLLKGFDYADLPVTVNVQKLESDIPAEDLRDGSVDLVICFGPDFHRR
HADFKSQMLLEDDLVCVFDKRATPPREPRFSLQSFVERRHVFPTPWTSDS
NMVDGWLARQAHKRQIVARSNSYSAALKMITGTDFLLTLPRRIQALLANE
AVFNHCEAPSGLPGFSLDMQWSQHTDQDSAQTWFREQIVKVCAEQGLA
>PFL_0381 transcriptional regulator, LysR family
MDLKQLRYFVAVAEELHFGRAANRLCISQPALSFDIKKLEGQLEVQLLNR
NNKSVSLTNAGQVLLDEARYLLLRADQARHLTQRSAEGFAGRLSLGFVNS
ILHRGLPEAVKAFEQQYPETEVVLMEMNSADQTQALQRGQIDIGFVHGST
FAAGIHSEPLLAEPFLCCLPQSHSLATQARIDLAQLANDDFILFPRAVSP
HYHDLIISRCVAAGFSPRIRHETRLWQTVVAMVAHEMGVALVPQTLAMLG
QPGVHYGELEGSGAPSQIQAIRLEDKPSAAAESFLGLLKSLIKPAAGGR
>PFL_0610 transcriptional regulator, TetR family
MLPRAEQKQQTRNALMDAARHLMECGRGFGSLSLREVAKAAGIVPTGFYR
HFSDMDQLGLELVSEVGQTFRETIRLVRHNEFVMGGIIDASVRIFLDVVE
AKRSQFLFLAREQYGGSLPVRQAIATLRENISSDLAADLTLMPKLQHLDA
ADLSVMADLIVKSVFATLPDIIDPPAQALPEHLTPQAKITQQLRFIFIGL
KHWQGLGSTE
>PFL_3717 transcriptional regulator, AraC family
MTVKTSWYEADTRFIPGHYQPAALIDLALSRDIDSHRLLRGTGLFHEDIL
AGQTRLSPQQFLALIGNGRRLLDADDSSFLFGQRLLPGHYGAASHALRHA
QNLHQALDALVQQQALLSPLASPRLVLDEHHAYCYWLDSCGAGEHWRFLL
EASMTSLVAMSQWLAGQRLPWECSFSHSEPRYVEQYWVHLGEQTQFQRPL
DLMRIPRQYLTRPWPGASATAGQVARLEAGEHLRQLGFASSFLDTLYRYL
KTQVRHTPSLEQAAQDFAMSPATLKRKLSKHHSGYQQQVDRVHKHVALYL
YQIKGWSNEAVAEYLNFNDPANFRRSFKRWTGSTPSLIRQLLGSG
>PFL_0127 RNA polymerase sigma-70 factor, ECF subfamily
MSSPEFAVQTLYSHHHGWLNRWLRQRLGNAADAADLAQDTFVRLLQKTER
LELKAPRAFLRTIARGLVIDHWRREEIERAYLETIAHLPEAETPGAEARA
LILELLESIARMLEGLKPKVRQAFLLAQCEELTHKQIAQQMGLSLRTVER
YVAQALYHCYLLRYES
>PFL_3457 transcriptional regulator, MerR family
MRIGELAKISGLAPSRIRFYEASGLIKSVERKANGYRDYAPDTEWVLEII
TGAQAAGFSLDEIRQLMPMNASGWQHDQLLGGLKQKVEEIEVLQQRLAQN
KEQLLLVIKGIEGKPEGMACTDNAQMLINRLREEGVAPASGKRAAGAARK
RTTRQAYGA
>PFL_4891 acetyltransferase, GNAT family
MQIQRLTPDDVEQYRALMLEAYERHPQAFTSSVKEREKLPLAWWAARLDG
ELDLLLGAFSEGRLLGIVGLAFELRDKARHKATLFGLYVTGTQRNSGLGY
RLVQGLLAEAAEYEGLRLIQLTVTAGNEAALALYQRCGFVQFGLEPQAVR
VGEDYFDKIHMWRQLPAEG
>PFL_1522 transcriptional regulator, LysR family
MIHSRLRLRQLRLMLALQEFGSLRRAADNIGMTQPAATKMLHEAEDLLGV
ELFERLPRGMRPTPFGETVIYYAQMVFAELSGMREELVALESGNLGRVAV
GAIPALASGLLTRTIATLKQSHPRLSMSIQVDTSDVLVQALLQDQLDIVL
GRIPGGARAEELLFDSLGEEALCVIAGVQNPLAQATHLSWAQLQNETWVL
QQHPSPMRSIINQVFHNARVDIPSSIVETTSIMTLLSLVQQTDMIGVTPV
SVVEDYPGRHLLAVLPIQFEARLPPFGLITRRHRIQSSAMQAFMNSVRKE
HGLSRD
>PFL_5628 rrf2 family protein, putative
MSQSTRLITASYILSFVAANAPQRLRTETIAKWVKTHPTRVRSLVSLMVK
ANILKSWRGAHGGLTLARPASDITLREVYDAVQESSLIAEKIDNPFSGME
EHCKVFDVFTRLFAMLEANMRLDLGTITADQLFVAFEKPQENVRQA
>PFL_2445 acetyltransferase, GNAT family family
MTSNQQAPGAGRVIRVAGPDDVPAMLECDTYAQAHASRGDAVRVAVGRGQ
GWVEVAAGRVVGYLLLNHDFFDHGFVSLVVVAPGQQRQGVARRLLGAAER
ACRTPRLFISTNQSNLAARSLIAKAGFQPSGVIENLDEQDPELIFCKRVG
>PFL_4362 aminotransferase, class I and II family protein
MAFSERVSRLKSSLIREILAAAQRPEVMSFAGGLPAEVMLPKVQWQDMPL
AMGQYGMSEGEPQLREALAAQARQLGVPCEASQVLVVSGSQQTLDLAAKL
YIDKGTQIMLEAPTYLAALQIFQLFGADCLTVPLQADGPDLVQMRARLEQ
HRPAFIYLIPTFQNPSAVRYSEAKRDAVAALLDEFGVTLIEDEPYRELTF
DGGSATPIVGRLEKASWIYTGTVSKTLLPGLRVGYLIASPDLFPHLLRLK
QSADLHTNRVGQWQAMQWIGSEQYQAHLDQLRSFYRQRRDEFQGALLTHF
ADLADWQVPQGGLFFWLSLKQPLDTRTLLKSALEHDVTFMPGEPFFADPE
RNPGHLRLNFSHIDPARLDEGLKRLATVIRQAQAAQAA
>PFL_5201 transcriptional regulator, LysR family
MSRFARHLPPLETLVTFEAVGRNASFTRAATELCLTQSAVSKQIRALELS
LKTELFERQARGVKLTASGASLFVEVSTQLEALLRSVSRLRAGRDANTIT
VQCTHAVAQFWLFPRLLAFNKQHPDITVSIHANNDMDESSVAEHDFGILY
GAGHWSSLAAVSLFAEMVYPIVSRRLELPVVKELAQLAELPLIQLDASEW
NCIDWRDWFHHFGLDYSAPPGALGFNQLTLMFSAVQQGMGVGLGWDFMAS
QLVAQGELLRVGEWAFRTGQADFLVHPRHKRLSASGQLFRDWLVAQAAE
>PFL_2915 transcriptional regulator, LysR family
MDNLNGLQVFVSVVQSGSLVGAGERLGLSASAVGKALARLEQRLGVRLLN
RSTRRISLTDEGALFYERGQRIVAEVQEAEAELARISDKPRGRLRVSLPA
IGYRMLLPILPEFSARYPDIELDLDFNDRLIDVIAEGVDAVIRSGELPDS
QLKSRNLGPFGFVLVGAPGYFARRGTPRTPRDLEQHACLRYKFPGGSLLQ
QWSLRLPDGAPPLVLGSALTSNNLESLIHASTQGLGIAYVPEFVVCGALA
DGSLVAVLDDYQQERGKFSILWPSSRHLLPKLRVFVDFLGERLELGKHHA
SR
>PFL_3153 conserved hypothetical protein
MSRASRLLTLLQMLRGKSRPVTAATLASELEVSERTLYRDIAELTALGAP
IYGEAGIGYVLRSGLFLPPLMLNADETEAVVLGLRYVDQRGDEELNKAAA
DAMAKIAAVLAPAAQDALRNPTLLPGPAGYGFPDNPVSLNVFRQAIRLQA
KLLIDYADVNQNPSQRRVWPLALGFLNEARVIVAWCELREDYRTFRTDRI
AAAQEQGERYPGRRSDWLRAWRKRMHSDEQGRFTADRK
>PFL_4484 negative regulator of flagellin synthesis FlgM, putative
MVIDFSRLNSSPSLTGSTRTSTSKETGDAGKSTPLTTAAETSKSGESVHL
SNEAQQLQKVTDKLRDQPAVDKARVAELKQAIADGSYKVDSNRVASKLLN
FEAQR
>PFL_1580 transcriptional regulator, MarR family
MPLTDEHRFGMQLAHMSRGWRAELDRRLAGLGLSQARWLVLLHLARFEEA
PTQRELAQSVGVEGPTLARLLDSLETQGLVQRQSVVEDRRAKKIVLCPSA
RPLIEQIETIATALRHELFVGVDEEDLRVCIRVHERILANLEKS
>PFL_3147 DNA-binding heavy metal response regulator
MRILVIEDEPKTADYLHQGLSESGYVVDRANNGVDGLHLIQQQPYELVIL
DINLPGKDGWQVLEQLQGNYPARVMMLTARGRLEDKVKGLDMGADDYLVK
PFQFPELLARVRTLMRRSEVIVQPEVLQVADLQLDPRRHRAYRGSRRIDL
TTKEFTLLHVLMRHSGEVLTRTQIISLVWDMNFDCDTNVVEVSISRLRGK
IDDASDVKLIHTLRGVGYVLEARP
>PFL_4206 DNA-binding response regulator, LuxR family
MTCNLLLVDDHSLIRAGVRALVMDIPGYAVIGEADDGSFLLEMVERLHPD
IILLDLSMKHTGGLDALRRLKALHPQSKVLILSMHTDPALIMQALECGAH
GYLLKDTTATELEHALQALRNNERYLSPAIAHTVINQALTRAQKQPPPPE
QNHNLTARQLEILRLIVRGKSTREIALGLGLSIKTVETHRSQIMKRLQIF
DVAGLVLFAVRERIISLDD
>PFL_2831 transcriptional regulator, AraC family
MPQVLEHRLLDGRLLLQLLPAAAYSARDPAQWQTLGVTLERQRGVHAIDS
DRREDFDTWPGTLALTPAGIEVFSESAMGGEYLLLRWQGATPLVPGQRRM
QSPGHARALALGREARRLLLAPEADELALEQCALAFLGLAQPGRAAPAPA
PELGQVLQQMADEYARALSLAQLALTYGHNELRLLRDFRRAVGITPHAWI
TEVRLQAARRLLEHTDLPLAAVAQDCGFAHQSHLGSALRQATGLTPRQYR
LQFQRRAADTAL
>PFL_2126 transcriptional regulator, Cro/CI family
MEFKDRLKTARRHAQLNQTELAERAGLTQTSISDLERGKSKATAFVAQIA
SVCGVSSMWLAEGVGEMLKAADTASARTQPSVHLDDIETWDDATPLDDNE
VYVPFLHEVELAAGSGRFVIEESDTARLRFFKKDLRQNGVQFNNAKCVSV
SGNSMVPVLRDGATVGVNVGRNALKDVVDGEMYALNHNGQLRVKQVYRLP
VGLRLRSFNRDEHPDEDYSFAEIQEQQISILGHVFWWAMYSR
>PFL_5891 transcriptional regulator, LysR family
MLSAELKAFYMVARLGSITQAAKKLGLSQPTVTTQVRNLESQYAVELFYR
GGRRLSLSDEGARLLPMVKELLQKESDIEFFLRNCGQVQGTLRIAATAPY
YILDLVKTFRQRLPQVEVSVEIGNSQQVLEALEDYRVDVAASSQLLEDSR
LVRRVLGSDPLVLAVHRNHPLAALDHVPLNALAGHTLLMREPGSTTRSLT
EGLLKNANVSFGPLLEIGSRESIREAVLRNIGISIIARQEVPHDPQLRVL
TIENAPQIAEYLYCLKERKNARLPAAFLGLAQEMAPA
>PFL_3227 transcriptional regulator, AraC family
MKPLAKFGKLRLFLFEKPMSAPDDGPLHTQATGETVMRYHLCWKHRDLDG
VMALYHPDIQYNDFFQNRTLGLEELREYVRASMPRAPDEALEHSDRIRLD
GNTAFIQYQVTLRGGQGLVSFRSSEAITVRDGLIWRVNEYASLVREPAPS
KSSARLRPAASRLGLSPRQLSFMAEDLQQYFQRQQPYLDPELDLQRVSRE
CGYSRNQISYLLNQVLGQSFYRYVNQARLQHLLAALDQATPPLRIDELAF
AAGFNSLSAFYSCFRQHTGQSPKAYAKQISLRARAQDSP
>PFL_1753 DNA-binding response regulator, OmpR family
MQNTSAPLNEDAKALVSGDDKRWNTRALIVDDDVPIRELLIDYLARFNIH
ASGVTDGAAMRQALQAEHFDVVVLDLMLPGEDGLSLCRWLRTESDIPILM
LTARCEPTDRIIGLELGADDYMAKPFEPRELVARIQTILRRVRDDRSEQR
ANIRFDNWRLNSVLRQLISADGLVVPLSNAEFRLLWVFIERPRRVLSREQ
LLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKSPQLIKTVRGEGYLFDA
RDIG
>PFL_1667 motility sigma factor FliA
MTASGYNLYKKSARDSQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQ
AGMIGLLEVSTKYDASKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRN
TRMVSDAIRAIEAKTGRDAKDHEVAAELQLSLDDYYGILNDTLGSRLFSF
DDLLQDGEHEGLHEDGASAHLEPSRDLEDERFQAALADAIANLPERERLV
LALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRLGEWRAR
>PFL_2199 SIS domain protein
MKTTMSQPIKQRLESSLSSATASGRAIASYMLANLYELPFQTAADIAEKL
GVSESSVGRFCRAIGYSHFKDLKNDLKNDLGEGPWLVGDRLQEFRQQPNP
AAQGLPRSFELEVGALVKVYEYSLTPAWQTVVQRLASRRRVYVAGFQTER
GIAASMVHLLQYLRDGVHLVDGAAGHFADVLLSPAEDCALVVFEARRYSR
HALTLCHKAREAGIPVTLVTDTFCDWAEQNADEVFRVPTEFNLFWESTAA
MLSLVHLLVNEVCKHLGPEVEKRLEATAALHNEFVGYTSSARPKQ
>PFL_5188 helix-turn-helix domain protein, putative
MNIRPIHTDQDYRAALKSVSPLFDNEPQPGTPEGDYFDVMITLIQAYEAR
QFPLDLPNPIEAIKFRMEQSGLSAADLAPAIGRTNRVYEVLNGKRALTLP
MIWKLHQLFGIPAESLIKPIKSS
>PFL_2056 transcriptional regulator, TetR family
MNDKKAQTRERILQAASSALIQRGPAEPSVGEVMGAAGLTVGGFYAHFES
KDALMLEAFTQLLSHRRGLLDEMDASLSGEERRALAAAFYLSRKHRDSTE
QACPIPASVGELGRLPESFRKALNEHMELMVAQLAASPEDTDKALADMAL
MVGGLSLARALGPGELSDRLLRAAKSAVL
>PFL_4074 transcriptional regulator, LysR family
MEDLNTLYYFTQVVEHRGFAAAGRALDMPKSKLSRRISQLEERLGVRLIH
RTSRHCSLTEIGQEYYQRCLAMRVEAEGAAEVIERNRSEPQGLVRVACPT
ALLNSWVGPMLTRFMLKYPLVELFIESTNRRVDLIHEGFDIALRVRFPPL
ENTDLVMKVLGNSTQCLVGHPDFLQRLSGPATPADLSGLPSVHWGAAQRE
YQWQLLGPDGAEALIRHRPRMVTDDLLALRHAVLASIGIAHLPKVVVRED
LEAGRLLELVPDWAPRCGIVHAIFPSRRGLLPSVRSLIDFLGEEFSHSDM
A
>PFL_2953 transcriptional regulator, AraC family
MTASNPLQVQAFNTFDVADQIRATPGWVQHYQQMSPGHFNGLVRYLDLQG
VEIYEECMNTRVEQNFSAPQGALAFCFDRSDNALYVLNGESRNIWITPEN
YQEVAVVFGPEFVRGHGLGVERLDGLFMAPLNSQQNALFCRWLSSTLTRL
SQTLDPPSREALTQQLLEDCLYILDNACVRLDRGGLQRRSEERGIMQRVA
QWAADVPEETLNLLELSQVAGVSLRQLQSAFKAFTGMAPSQWLRLRRLNS
AHRELLSRGPTETTVAEVAMHWSFWHLGRFSSSYRALFKELPSQTLKRSA
VARR
>PFL_3566 acetyltransferase, GNAT family
MDGFSLRPAVDSDLAFARDLTRSTMLGYYIRNDLLWQDEAFDVAWAGRRN
LLICQGARVLGFVSLSRDAQALYVRELHVLEAFRGQGAGAWTLEQVLELA
RQERRGLLRLTVFKGNPAQRLYERMGLRVVGEDDCFWRMERLSDSLAGRL
GDA
>PFL_0515 lipopolysaccharide core biosynthesis protein, putative
MASWNLDPAYQALAEDFGSLEAVFALQGEHLTRDPLSEVIRVERGGVNYY
VKRYTGAGKNLRRYLGKPRVKFEWQNLKRFAKWGIPTADVVAWGLERRCL
AYSRGAMITRELPRTEDLSVLAERNDPRLQDRRWVDGVSRQLAAYTRVMH
DHRFTHNDLKWRNLLVDDQDRLYLIDCPNGDFWRGFWLKYRITKDLACLD
KVAKYHLSATQRLRFYLQYRQRDHLSAADKERIRHVVRFFEGRE
>PFL_1767 transcriptional regulator, LysR family
MDYCVMSINLPLPLLAEMAIFVRVVETGSFSEAARQLGSSPSAVSRSISR
LEKALATRLLQRTTRKLRLSDGGEEVFKRCSEMVSAARSVMEVSGQFTHE
AEGVVRVSVPKAVGRFVVHPHMPEFLRRYPQVDVELLHEDRDVDLIDDNV
DLAIRITDRPPPGLIGRQLLRIDHLLCATPQYLAEHGTPAHPQDLRQHSC
IYLGETPSDARWKFTQGSKAVTVGVRGRYAANHTGVRLDAVLQHLGIGSL
PYFTARHALEQGLIVQVLPEWTFLASYHGGAWLLHSPTRYLPPKLRVFID
YLVECLAKEPTLNRPGKAERPL
>PFL_5407 ATP-dependent RNA helicase, DEAD box family
MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLGGRDLMAAAQTGTG
KTAGFALPLLQLLTLEGPKVDSNSVRALILVPTRELAEQVHESVRQYAEH
LPLRTYAVYGGVSINPQMMKLRKGVDLLVATPGRLLDLFRQNAVKFSQLQ
TLVLDEADRMLDLGFSEELKSIYAALPKKRQTLLFSATFSDAIRQLAGQM
LNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELFSHLLRKNRWKQVLVF
AKTRNGVDALVEKLQGQGVNADGIHGDKPQATRQRALDRFKASEIQILVA
TDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGSTGEAISLVCA
DEVNLLSAIEMLTRQTLKRHEEQDFEPEHRVPETDASGQVVKKPKKPKKP
KTSGGGGKRNLGKWVDSGEVAEAPAVKPVRKVPAFNTGPRKRKP
>PFL_0783 pesticin domain protein
MSRYAIDFSFIAALEGAAITRGYVPDPDKSKSGVTVGTGFDLGQRNVEDL
QALNLPADLIRRLTPYLGLKGLKAKAFLDGQPLNISSDEALLVDEAFKAP
FVDLLAANYTQASGVDFAQLPAPMQTVIASVAFQYGNLASRTPNFWAQVV
ARDWKSALANLRNFGDSYGTRRRKEADLLGSQLTS
>PFL_3235 transcriptional regulator, putative -FRAMESHIFT
MGFSLGEIGEILNAQCNQLIDCADGAKLIERKMAEIKQKIANFQRIYRYL
DQERATLEASAARQLELQHFQLSCQRESAATQRSEQ
>PFL_5720 RNA polymerase sigma-70 factor, ECF subfamily, putative
MNGTTAHPGLPSGWIDRCQPWSIHLPPAWRTAISALDPDQLRHLLAQCSL
GDRRAFETLYRSVAPYLNGVALRFMGRRDLAEEVLQESFVRIWNNAVRYQ
PHLSAPLTWMINITRNQAIDQLRKHRERPLGEGEQQQLMDDAPSAHEQLD
SARQARALNRCLESLEGMQRQSITVAYFQGLSCSELAEQLAAPLGSVKSW
IRRGMERLRRCLES
>PFL_3564 transcriptional regulator, Cro/CI family
MGSYIQMSGIGSRLRQERERLGLSQKVFGEIGGVEANAQGKYESGDRAPK
ADYLSRVAAKGVDVLYVLTGSRIPIQSGGLSQTEEKVLDCYRALFKEDQD
AICRLTSTLAELSASQGERRKAQVRE
>PFL_1199 transcriptional regulator, LysR family
MNDNRWEGIDEFVAVAECSQFTAAAERLGVSSSHISRQVARLEERLQTRL
LYRSTRRVTLTEAGQTFLQHCQRLQDGREEALRAVGDLTSEPKGMLRMTC
AVAYGERFIVPLVTRFMSLYPQLRVDIELSNRPLDLVHEGLDLAIRLGRL
QDSRLVATRLAPRRMYLCASPSYLERYGRPHSLSELSRHNCLIGSSDIWQ
LELDGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQLPDYYVLEHLQNGT
LISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDYLKQGLAQRPEYRDL
>PFL_4913 transcriptional regulator, GntR family
MWVPQLSEFNQPVYLSIADALARDIGSGLLNDGDRLPTLRELAVTLNVTP
GTISRAYSEAQRRGLVQGEVGRGTYVLAQPPLVLPEGSSAPSLSLGQAEA
LDLSIIKPYSETLEYWLRGALVGMARSSDFGRALDYAPDGGHPAHREAGA
QWLRHSLPEANWQQVVITSGAQHGLMVAISALSNAGDLVLCESLCYPGII
SVAHGLERRLRGVGMDEEGILPEALREQCLREKPALLVCVASCQNPTTAI
MSPRRRAQIAAIAEEFDFLIIDDDIYGFLATDPSIKPLSSYAPQRSVYLT
SLSKAIMPALRVGYLYSPPKLLSRLSSMVRSSVWMPSPLTAQLASNVIVE
GLDRKLVQTQRNEAAARQAIARDVFAGLEIRTQPHSYHLWLTLPEPWTGD
EFATLARANGVLVMSGSQFQVERGASSRCVRVVLMSPTTQDELRFALTQL
ASLIEADPRRYR
>PFL_4163 protein kinase
MIRFCPNCQTERPLAEIFCEGQVDNRACGWELSAEAIHPEGWRPQPVITL
EALEPQPPVAADSGSPLLCGNGHAMADGDLMCLVCGADPLAPEQQPPAAP
PAADSETVIEGWRLLRQISSGGVRERFIAEHRETAHQAVLTLYQAGAEPD
PSVYEALKRLPREHVPEIILTGRWDERAFEVAEELTGGTLADLGIVVSDR
AAVQHIVRELGQALHAFSEAGLRHRDLRPATLLVRSREPLDLVISGFGSA
RLSEFDLDIVSPLETSRYMAPEAIAGGVAAASDWWSLGMILLEQLTQGEC
FAGINANAYLIHILANGVLLPDDLDPRLELLLRGLLARDRHQRWQWPQVQ
AWLQGESPSVPASVASEEDAEEGASVALGSRRFRRPGPFALAAAEVEHWP
QALDHLLRGVIVTWAEQAGLPARQLAGLRQVAQHEGLDDDTRLMLALKLL
NPEMPLIQRGEIVTPGWLLEHPLDGYRLISGPAPDLLERLETEHWLSRLK
LRTEQVRQRAQHQAIELDEEQLRIYLLSSSRARLAAQWEERQRLLPDSEH
NGILSLADRRSISEEDLIVLLSAAIGQFRSVDAILEEAATLAREAVVLSF
DAASARALLGLPRPALYREVDERISGFARCGVPSVDEWAEQFRLERRMPL
ARALVLLAIGAEQWLEPQKQHYVSQILDFFEKKVASVVLRGPLVRMSIGK
TTARVDLNELHSERSPAPALLDHLVARNAQPISLDPACFAENPQLDARLN
SLYRQSSLYKRDTGIDGLYLGFPFLLTRDARGTTRTRIAPLLLWPVKLLL
EVGSRGKVALVFDSEREEVRLNPGLDTLLGIDAAKLWRKAADELLGRSAL
KAADVMDAFGMLATASSRVLGSLPPPSTEVQPYQDQLACAAVLFHVAFMG
QAIGEDLRQLKALPPGGTGLETALRLNPAEPDSGDSAATALAPELQRFFT
VASDPSQEAAVLQARQAPGLLVEGPPGTGKSQTIVNMVADAIGRQRSLLI
VCQKHAALEVVHKRLVAEGLGNRVVMLNDINRDREPVIRSVREQLEALFK
DDAVQQPWLHQRERLAARIEALEGELDRFHQSLHRIDEHCGLSYRQLIGE
LIGLEQGPAALDVPVLRQHLAALDIASLTRLEEACAPLIRLWLPARYEHS
ALAQLQPFPTDAATVQAFNQGFERLLSCEEQRLETLQAHPADFEVDDPAP
YRAWLDQHLHSLLGLDDERRQRLARWLPLFRGSNGQAAEGDGLIQALQAL
AQQLEQCDATAYQADLAPGLSALPAAQLRTLQQRARAVIQGRSWLARLNP
LRLIRQRQLLAFLAEQGAAAQPQRLPELLAAALLESQWRPLRAQLQHLHQ
QLSLAQIASDCGPGLLPQVRQDLGQLQEMRALAMTLAQAPRVEQLDAVVL
TGERRSLDSLLAGYDAAFIRHSVRQDSLNALQRLDQWLQPELLGQLRQRV
EHNQGNQSALNRLRDALPTLSAYQAFRARAGQLSPADLELLVVLRDYQDA
LDAIPAEQLEAVVRHMLNREARLGWKRQIEQRQPELMLEHSETAAKIASL
GEADTQMRNLNRQLLSEGIELSRLGTRKQWEDVTRLTGRRSRRLREFMEM
GAGLGLMSLRPVWLMNPDVASRVLPLKPGLFDTVIYDEASQMPVEFALPT
LYRGRVTVVSGDEKQMPPTAFFSSRVESDEAELFDGDQPDADADEEQREA
FEDTWNRREIKDCPDLLQLARSSLPSTTLQIHYRSAYRELIGFSNASFYG
NRLSIPVRHPQANILAIKPLELIRVDGVYQQQVNPDEAERVVDYLAELWQ
APYAERPSVGVVTFNRKQADLIEERLELRAEQDPAFRAAYSQERERSEDG
EDMSVFVKNVENVQGDERDIIVFSSTFGRNSQGSFRRNFGVLGQTGGERR
LNVAVTRARRKVVMITSMPIADISDMLTTQRPPASPRDYLQGYLEYARAL
SAGEFASGHSLLGRLVTERQDAKVQHNAHSDGFTQAVAAYIRTLGWSPVS
ANEGDAFGLDFAIEHPDTGLYALGIECDTPRHGLLARARSREIWRPSVLR
RAIPHLHRVSSQAWYHDPQSERARLQAAIEQALQPLAGADSVTQPPALAD
TEQTP
>PFL_1054 transcriptional regulator, GntR family
MSEISPLIKRSLVDQALEQLRLRITNGAWVVGQRLPTEPELASELGISRN
TVREALRVLAFSGLIEIRQGDGSYLRAVADPLDMLQALSQCSLEQARETR
HILEVEAVGLAALRRTDEDLHALSDALAVSGGHFHGELESYIACDLVFHQ
RLVDAAHNPTLSQLYRYFSSVVGAQLRQTLTVTPRRQEVFDRHQHLLDAI
EQRDPERAKNISRQLINES
>PFL_6043 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein
MTLYVNLAELLGTRIEQGFYRPGDRLPSVRALSVEHGVSLSTVQQAYRLL
EDNGLAMPKPKSGYFVPPSRELPALPAVGRPAQRPVEISQWDQVLELIRA
VPRKDVVQLGRGMPDITTPTLKPLLRALARLSRRQDMPGLHYDNIYGVLE
LREQVARLMLDSGCQLGAGDLVITTGCHEALSTSIRAICEPGDIVAVDSP
SFHGAMQTLKGLGMKALEIPTDPITGISLEALELALEQWPIKAIQLTPNC
NNPLGYIMPEPRKRALLTLAQRFDVAIIEDDVYGELAYTYPRPRTIKSFD
DDGRVLLCSSFSKTLAPGLRIGWVAPGRYLERVLHMKYISTGSTAPQPQV
AIAEFLKSGHFEPHLRKMRTQYQRNRDLMLDWVSRYFPAGTRASRPQGSF
MLWIELPEGFDALKLNRVLLEQGVQIAVGSIFSASGKYRNCLRMNYAAKP
TAQIEDAVRKVGAAAIKLLSETSD
>PFL_5050 DNA-binding heavy metal response regulator
MRVLIIEDEEKTADYLHRGLTEQGYTVDLARDGVEGLHMALEGDYAVIVL
DVMLPGLDGFGVLRALRARKQTPVIMLTARERVEDRIKGLRDGADDYLGK
PFSFLELVARLQALTRRSGGHEPVQISIADLWIDLISRKASRAGSRLDLT
AKEFSLLSVLARRQGEILSKTAIAEMVWDINFDSDANVVEVAIKRLRAKL
DGPFEQKLLHTIRGMGYVLESRGAE
>PFL_5384 transcriptional regulator, TetR family
MTSERSIAPDEPALEPRKSRKNNPEKTRENILQEAIVEFVQQGLSGARVD
AIAERIHTSKRMIYYYFGSKEQLYVEVLEKLYGDIRSTESRLHLAELAPQ
EAIRRLVEFTFDHHDRNVDFVRIVSIENIHKAEYVKQSGVIKAMNNTILH
ALGEILERGAREGVFRGGLDPLDVHLLISSFCFYRVSNRHTFGEIFQIDL
PDEGIKQRHREMICESVLRYLQA
>PFL_5185 acetyltransferase, GNAT family
MIAADLDIPGLSPRRLTPQDLELICRHRQAMFLDAGKDLSTLQVMTEHFR
PWLRERLEDGRYYGFALMDAEQSVASIGLMSIDWPPHPSHPTQDQRGYVL
NVYVEPAYRRRGLASALMKLAEAEFSQRGLGFAVLHATEAGKPLYQGQGW
VATSEMAKQGFL
>PFL_4373 transcriptional regulator, GntR family
MPMSKPDNAFPAADSLATLKDSAKGTLADQVTAALKAHIASGEVLPGARL
PTEPVLCERFGVSRTVIREAISRLKSAGLVEVRQGSGTVVCEGAHIKAFT
IDLDVRGSIEAVLRVTELRRGIEGEAAALAAQRHTPSQLEAIHQALLAID
SAEQAGQDGVEQDLAFHLSISQATGNPLYPSLHEFIAQFIKEAIRITRSN
EERRKDLARTVRAEHLAVYRAIAARDVEGARQAALSHIHNAVERLKSADP
AFWRDSGSRIA
>PFL_0787 transcriptional regulator, putative
MKNKHYQDIPGCPVEVTLDLIDGRWKGVVLHQLLANEFLRFNELQRRLPG
ISQRLLTKQLRDLEAAGLVSRTVYAEVPPRVEYRLTDEGQSLQPVIEALS
AWGRGRISRQQQESTLT
>PFL_4528 transcriptional regulator, AraC family
MRLRQIRDCVGMRNISIDQLDQTPRPVLAIGTDYPDGQRLPRHRHRRAQL
LYGATGVMQVSTDQGNWVVPPQRAVWIPPGVEHEVLMLGVSTRSLYIEPA
AAPLDSSGCRVIGISPLLRQLLLEAVDMPLEYDLDGRDGLLINLLLHEIQ
RCPGLPLHIPLPAGGPLLELCRAFLARPDVHQSPLHWADRLHVSLRTFNR
WFRQETDMSFVQWRQRACVIQALARLAAAEPVTRIALDLGYDSPGAFSTM
FRRVLGQSPSTYLNQEHPAPGKAL
>PFL_4920 DNA-binding response regulator, LuxR family
MTCRIIVADDHPLFREGMLRTIQRLLPDAVLEEAGDLAAVMALAESGEEP
DSLILDLRFPGLTSVSMIAGLRQQLPRTSIIVVSMVDNQDLIAEVMAAGA
DGFIGKSISPDEIGQAIQAIREGDVVVKYAPSGLLLPLDACAEVSQLTTR
QQEVLRLIAQGKTNKEIARELDISPFTVRIHVSSLLHTLKVPSRAAAAVK
FTGTW
>PFL_4593 acetyltransferase, GNAT family
MPDLQINLLAEVERPLLNKFYRQHRSSMRAASEGQLWVARSSEIIAGMSL
SPAAEGYWLTGLFVAPTSRGQGLATQLVGQAVQSVEGPVWLFCHPDLQAL
YRSMGFCSTTCLPHTLNERLARYQRSKPLLAMAIDRPGSRP
>PFL_6149 negative regulatory protein, putative
MYLPRAFVDEDLARLQQLILGSRLATLVTWGALGLQASHLPLLLDPGQGA
NGTLYGHLAKANPQCAELAAGAEALVIFTGEDAYISPSFYPSKAEHGKVV
PTWNYVAVHAYGQPEVFSDPERLLKVVGGLTERHEAGRPQPWQVTDAPAD
YLEGMLRAIVGFALPIQRLEGKRKLSQNRSAEDIAGVREGLAASADLRDQ
QLSRLMS
>PFL_5005 transcriptional regulator, ArsR family/rhodanese-like domain protein
MTDSISPQQPLADMAELARILGHHHRLILLEHIARGEQPVERLVEASGLS
VANTSQHLQQLRRGGFVQTRRDGKRVLYSLSQGPLAALLGGLRQYVDYNH
GQIRELLADSEQQPGRLEGISREELRQRLQEGGMTLLDVRSPQEYALGHL
PGAINIPVEELEQRLAELPAGQELVAYCRGPYCVLSHNAAALLRAKGFRV
RRLDDGFVDWQAAGLGVETTR
>PFL_2088 transcriptional regulator, Cro/CI family
MQTFGERLKEQRKALGLSQQEFGAIGGVEANAQGRYESGERVPKSDYLMA
IGRHGVDLLYVLTGERSRLSEGSLSLDESTIIQNYRHLGDEDQEAIAQLA
SSLAEC
>PFL_4567 acetyltransferase, GNAT family
MTASTPLIRTVLPTDLDRCFAIETLAYEGDEAATRDKIATRIATWPEGFI
VAEVQGVVAGFINSGATFDVQMADEAFKELIGHDPAGPEVVIMSVVVHPD
FQGLGLSRHLLQAFIARMRELGKARIHLMCKERHVPLYQRFGFVYIKASE
SDHGGMAWHEMVQSL
>PFL_4895 response regulator/HD domain protein
MGELNVATVTRRPEILLVDSQEVILQRLQQLLSPLPYTLHFARDATQALQ
LLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIA
KAINEGEIYRYLSKPWDDQELLLALRQALEHQHSERERLRLQDLAQQQNA
ELKALNTLLEKRVAARTSELQQTADMLDLAYEELKPSYATGAELFSLLVN
QRLPADKQTNRRIIELVRAYCKVQGIDPGAQRDLAMAAALHNIGKLSWSD
SMMTSPADLLHHHQRERYRAYPAQSESLLMTLEPVQDAARLIRHHQEHWD
GSGFPDHLKGDAIPLGSRLLKLAVDFIELQCGLILERHMNSDEALVFIRK
YAGRLYDPDLVEGFIQVCAVYLSDVTLGDPSVKVLSTRELAAGMILARNL
NADNGMLLLNAGKVLNLPLVDKLIAFETMEGARYSVFVKLPQEQQARA
>PFL_2191 transcriptional regulator, GntR family
MILPFELDRSQTAPIYRQLYQRFRESIADGRLRPGDRVPAVRALAAELNL
ARGTVEAAYQLLIGEGYLTARGAAGTIVTPQLAPVSAPTQRAPVAPTTYQ
ATHAGTSPLALQMGLPALDAFPRKLWTRLAGRQLRQAGVEGLVYPDARGY
APLRAAIASYLGISRGISCHPEQIFVCAGYRACLDLISHTLMRPGATCWL
EEPGYFMARSALLEAGAQLVPVPVDDQGLDVAQGIARAPEAGFAVVTPTH
QSPLGVSLSLPRRLALLDWANRQGSWIIEDDYDSEYRYQGKPLPALKSLD
QQGRVLYTGTFSKVLFPGLRLAYLVVPTEQTPAFARQADRLHNHCPHLQQ
ATVAAFLNEGHFARHLNKMRGLYARRRQWLVEALHQALGGRLQIDPQAGG
MHVVAGLGEGDDVQIAQRARGEGIAVEPLSQWYLGDGVRQGLVMGFTNVV
SAEQAVSVAVRLARAIG
>PFL_2294 transcriptional regulator, LysR family
MIETRLLRQFIAVAEELHFHKAATRLHMAQPPLSQAIARLEENLGFSLLR
RNRRGVALTPAGVDFLHSARRTLATLEQGIEQARHIAQGLAGSLRVSSLS
LAGYPSLLASLRGFRQALPEVRLELRELPSAEQLKGLLGGDIDLAFMREL
PLPEGQIASRLILDEPIVIALPHDHPQAQAPEVDLRELANDDFVFTPQAL
GSGYHNQLMALCSAAGFTPKVVQEVARVQTQLGLVGCGFGVALVPRSMAD
AVLQGSVAYRPLRAMGTQPGPSIGLYMNWHRDNPSPQLQRFMALLDAGLP
KPDAAVQKACATATGP
>PFL_3430 transcriptional regulator, TetR family
MSSRQNTDTSPRRRLTREQRLQQLMGVAWQIVREQGTEALTLGHLAEQAG
VTKPVVYDHFDTRAVLLAALYQDYDQRQTALMEQALETASPTLAARADVI
AASYMDCVQRQGREIPGVIAALASSPELEQTKREYEATFLETCRGALEPF
ANGAVIGTAGLRAMLGAAKALSHAATLGEISFGQAQEELCDTIVAMVERA
RARQRTPASGASR
>PFL_0754 transcriptional regulator, GntR family
MSRTFELETLKMRLSDPEFRPLDLHQRIQRALRGLILDGALGPGVKLPAT
RALAKSLAVSRDTVENAYVQLQRDGFVLRRKGSGSYVCETIGAQLRGPSR
RRQLQQGLPAHSPEPGAGLSRRGAALLARGGVSDQQAVTAFATGLPETRS
FPLEVWERLQRQALKDYRASVLLHGDPQGALPLRKAIAAYLNLERGAKVQ
PEQILVLSSTRQALFLCAQLLVDAGKPILMENPGYFGARKAFEAAEARIV
PIDVDGQGIRTDLLRADRSGARCVYVTPSHQYPTGATLSLERRLELTRWA
AEHDRWIIEDDYDSEFHYEGLPTACVQGLDPFRRTLYIGTFSKTLYPGLR
MGYMILPAELVGAFSSARSIMDGHTPQILQLTLARFMEEGHYNAHVRAMR
KLYAGRRQAMLEAIGRHLPGIARALPPPGGLQVPCLLEPGWSEELTQQRA
ARAGIQLPGLSRLYAGEQKQQGWLLGYASLSAHEIEAAMARLAQALGKA
>PFL_2746 RNA polymerase sigma-70 factor, ECF subfamily
MKNTGHSAMVRLFLTSYEDFRVRLRRRLGSEDLANDVLHETYLRVDRMEE
PPNLAQPNAYLYRMALNIAADRRQSDARLLTGDEVEELLQIADEAQDPSR
VVGGQKEIQTLLKALYELPARRRKIFIAARLEEAPHLEISQRFGISTRMV
EKELKAALGHCALRLERKVIQRFGPGAGKPS
>PFL_3317 transcriptional regulator, AraC family
MDMALTKTAPPSADAPLFWRDAALPFIEARSIADGRKVCYCAHAHEQFSI
GCITAGVSTYVSEQTQRQVGAGTVVLMNPGVVHACNPIDDQPWSYRMLYV
DTPWLTRLQHELGVSPELQFQPFEETSSDDPQLFADLEQLYHALVDPQAE
TLHKHSCVVAFFSELQQRLNPAKAPPRENNHKLERAAQFIRQHCTEPLDL
EQICQAAQLSASYLIRAFKQQYGMAPHAYLVNRRVQFAQARLRQGVPIAE
VAQAAGFADQAHLQRAFKQHLGATPGQYQGPRRARRGEPQAH
>PFL_5228 transcriptional regulator, GntR family
MQRHPSFAYQAVYRYLLQWIDNAASDQEQRLPSLRELAQRLKVSLSTIKY
AYALLEDEGRICSRPRQGYFTRALAAATVPETGEDLLDNLYAQARLPGRL
ALCSDAPAMLLSLEQPLLMTERELARQYPRNQAPLYQPLGEQELRSELAR
RYTCSSRDYWQADQVFLGADLHSVVELALRALDLDGGVVLVESPCSWAIL
RQLRAARLRIIELPLDAGGRFDLQQVQALLQREPVRLAVFSSTVNIPHGS
LMPAADKQQLCRWFAERGIWLLENDSYGAFSFVPGAARYRDFADPERLLV
FASLDKAIGAEAPLSYVLSRSLGPALQRQCLERRFRLSPIRQKAVARLLS
SGRVDQHVLKLRGMLQQRMKQLQQLLDEQAGGLLHAPLAAGGATLWVEAR
RPVPMTRVYERLLADGIVIAPGAIFSQQGLWQQHLRLSFTLDWSKDIQGA
LGLLARAVSQAS
>PFL_4015 DNA-binding response regulator
MRLLVVEDHVSLADELLEGLNRQGYAVDWLADGRDALYQGASEPYDLIIL
DLGLPGVPGLEVLRKWRADGLATPVLVLTARGSWAERIEGLKAGADDYLS
KPFHPEELHLRVQALLRRSHGQANQQTLQAAGLHLDEGRQCVVRDGQDVL
LTAAEFRLLRYFMLHPQQILSKSHLAEHLYDGETERDSNVLEVHVNHLRR
KLGRSVIETRRGQGYLFGGTAS
>PFL_5195 acetyltransferase, GNAT family
MAVVFRPVAEADIPRICSFVGNPQELYFFFPAATWPLTHEQLRDSIAQRS
DSTVIERDGQVVGFANFYRWAKGGTCTIGNVIVDPEVRGAGLAAQLIGQM
IHIAHSKHQASEVTLSCFNSNVAGLLLYPKLGFVPFAIEERKNKEQERVA
LIHLRYSPS
>PFL_4552 transcriptional regulator, LysR family
MSLTLRQVRYFVATAEIGQISQAALHLNISQSAVTTAIKELEAMLAVQLF
VRSAQGMNLTDAGRHFLNRAYVILRSVEDALNSPLPDYRASGVLHLAASY
TVIGYFLPHHLQRLQHWHPDVTIELHEQERQAIEQGLLEGRFDMAVVLTA
NLTHPDIVSQTLFNSERRLWLPAHHPLCERSSISLADVAEEPFILLTVDE
AEQSAMRYWEQAGQQPRVRVRTSSVEAVRSMVANGSGVAILSDLVHRPWS
LEGKRIETLSLSDAVTPMSVGLAWHRERTFTPAMQALRDYFHDAFLAPQQ
LSARR
>PFL_1900 DNA-binding protein
MQISSLGAAIKRYRKVAGLTQAELGEKTGFDPKTISRFETGTYTPSVEAL
FLLAEVLGVKLKAFFADLGDEEEQRAYLFGVIHKATPKDLGKLIAAVDQA
LSKP
>PFL_2926 sigma-54 dependent transcriptional regulator
MSLITHPNARELTKSVRATVLVFKDPRSQELLSRIERLAPSEANTLIIGE
TGTGKELVARHIHHLSRRGREPFVAVNCGAFAETLVESELFGHEKGAFTG
ATTHKAGWFEAANGGTLFLDEIGDLPLNMQVKLLRVLQEREVVRLGSRTP
IPINVRLVAATNVNLADAVVAGHFREDLFYRLHVATIRLPPLRERPGDIL
PLAEFFLEEHCQRLGYNRASLTEEAERKLLEHSWPGNIRELENAIHHALL
VCRQQRVAPGDLHLVDMRSSGIRQEQAPLAVPGPQAPADLGRALQALFEQ
NIPDLYEHIEETIFREAYRYCHGNQLQTGRLLNISRNIVRARLEKIGELN
KPLATSAS
>PFL_5349 transcriptional regulator, GntR family
MVSYALKNNPFTRVASLPRRPRGERKLLVDDVYPQIFDAILEQRIAPGSR
FTEDSLGQAFGVSRSIVRQVLARLSHQQVVILRPNYRPQVAAPDLEQTRQ
ILHARRLTEITLVRLACQQPRRQLQPLRELIAQEREAIARDQRGPAIRLS
GEFHLQLAEIAGNGPLAQFLGSLVPLTSLAIAQFEGQARNYCSWQEHSKI
IDALQEADAEKAETLMNQHLAHLEQRLLGGL
>PFL_3057 leucine-responsive regulatory protein, putative
MADIRDLSIVLDRIDQAIIEVLRHEGRITYQKLSERVHLTPRPCLERVRK
LEQLGVIRGYGAILDEKKLTPGLSLLVLVALSNQSGRAAQKAFEAKVRAC
PQVLECRLISGAFDYSLRMRCRDMEHYRVLTEVWFDDPDLHIDKLVSHPE
LAMVKTGME
>PFL_3650 transcriptional regulator, LysR family
MAPDLTSIELFLKALTLGNLSRAAEQSHLSLSAASRRLSLLEQHFKVALL
TRTSTGVLPTAAGQALAEHARSLLRAVDVMHADLADFAKGATGRVSLYAN
SSAMSQELPRQLTQWSDLHPGIRVDIREERSREILLAVRDGVADVGIVTT
RPRGQDLHFIPYCRDRLCLIVPQDHPFKMSHARFQDLLGYDFVGLEDNAA
ITPLISEAAAAVSMPLRLRVQVRSFEAVCRLIAAGQGVGVLPQGAVQIFR
KEMALRFIEIDDPWADRQMYLCRRQEQPSLASRELFDYLAGCEQAAAAAG
>PFL_2325 NAD-dependent deacetylase
MIDRPTAPPLEQLAAAMHGKPFMVLTGAGISTPSGIPDYRDSEGVRRGRQ
PMMYQEFLAQPEARRRYWARAMLGWPRIRQARPNAAHQALAQLQAAGRIA
GVITQNVDALHDEAGSLEVIELHGSLQRVLCLDCAQRSQREAIQQQLEAH
NPYLAGVDAVQAPDGDTLLDPAFEERFQVPHCPYCNGSRLKPDVVFFGEN
VAAATAARALSAVHEAAGLLVVGSSLMAYSAFRLCRAVAEQGKPLLAINF
GKTRADELLDLKLGEPCDLLLPQLAERLLR
>PFL_1851 transcriptional regulator, LysR family
MEAFSSIECFVRSAEVGSFAEAARRLGLTPAAVGKSVAKLETRVGVRLFQ
RSTRRLTLTEAGRLFLAEVADSLQTIQNAVSTLADAQGRPAGTLKVSMGT
VFGGLYIVPMLGAFLRRYPDIHPDWHFDNRQVDLIGQGFDAAIGGGFELP
QGVVARRLSPAHRVLVASADYLRGRAPINGPEDLRHCRGILIRSPQTGRI
RTWQMTGRGGLMCPLELKASMTMSDSEAACIAAAQGLGLALVSMPFAVNY
LRSGALQRVLPDWYVDDGFTSIYYAEHKMLPGKTRAFVDFVIEQFAEQGL
AQAFSAL
>PFL_3940 transcriptional regulator, Cro/CI family
MCVEAGNTQRIVRPMDKWIELVKANMKGRKVTQEKLAERLGMSQGGIGHW
LSKRRQPKIEDMNRVLEEIGMGFLEVALVVREKPLLGDDGEPLADGPALL
NKYNPYFRYPVSDWRVAGEVREDGQPAYVPERYELSDYQARGAAFWLVVV
GDAMIAPSGLSISQDMLILVDPAIGAEPGKLVVVQCPGSDEAIFRKLVQE
GGLRYLVPLNPTYPKMLYSDKCRIIGVVVQATAKF
>PFL_1260 cold acclimation protein B-related protein
MSNRQTGTVKWFNDEKGFGFITPQSGDDLFVHFKAIQSDGFKSLKEGQQV
SFIATRGQKGMQAEEVQVI
>PFL_1397 DNA-binding protein
MSIRLKLLRKKLGVTLEALAEKSGMTKSYLSKVERGLNTPSIAAALKLAK
ALNVKVEELFAEDSISLDSYSLVRSDQRQSLAANGQTPGYAVLAHQVSER
NLLPFIIYPAREFSDKTFKEHLGEEFLFVHEGQVEVDFMNERVILNRGDA
LHFNAQKPHRIRSVGDEQAQLLVVVHSSED
>PFL_2908 transcriptional regulator, LysR family
MNQMNIASVDLNLLKAFEALHDESSASRAALRLGVTQSAMSAALRRLREL
YGDPLFVRTGRGLAPTLKANQLKPVVSEALNKCRQSLAMVAPDTADYQGR
SVTLGLSDDFEIAYGRQMIEAVARRAPKLRLIFRQSHSQIVAEALLQRSV
DLAISAGGFAERLLSRQVLGEGHYLCLADPASLAPGQQQISLEEFVAREH
LLVSSQGFIGITDEGLANLGLSRQVCASTTHFAALPFLLKGSQAVATIPA
HAARRIAELTGLQLLPCPLALPRYPIELGWRTSPQTDPLLVKVREAIVES
FALTCSPPSGD
>PFL_3261 transcriptional regulator, TetR family
MNEIMHSETRDIILDVTEKLIYQNGIAATGMDLLVKTAGVSRKSVYRYFT
NKDELVVAALERRDQRWMHWFCSAVNQTATPALRLLALFDVLKDWFATPG
FRGCAFINTSGETGDPQDPVRQVAKRHKQNLLDYVTELCQEHGVQHPEEL
AAQLLILIDGAITVALVMGNHSAADNAQCMARKLLDL
>PFL_5411 transcriptional regulator, AsnC family
MDKYDRMLLASLLENGRASYAELARKVNLSAPAVAERVAKLEASGVITGY
QAKVDMAKVGLPIQCVIELRLAQHGNQKAYDELIKIPQLTECHRVTGDPC
VIMQAAVGSMPELEELINRVAQFGFSKTSIVLSSAIERRVPLGQLESK
>PFL_2898 transcriptional regulator, LysR family
MDRFNAMRVFTRIVELGGFAKAADSLQMPPASVTILIKQLEAHLGVQLLH
RTTRQVSPTLDGAAYYQRCVRLLADLEESEAAFSLARHNPRGLLRIDMPV
GIGRLLVIPALPEFSARYPQIELEIGLNDRPVDLIREGVDCALRGGPALD
ESLVARPLAQLQQVTCASPGYLRQRGVPRTPQELQGHQMVEYFSNVSGKR
YGLEFFFAGQLQPVQLPKRVAMNSADGYLAACEAGYGLIQTPYYHVARQL
QDATLQRVLEDYPLPALPLTALYPPQRHLSTRLRVFIDWLVELFARPGNH
ISCP
>PFL_0808 transcriptional regulator, AraC family
MHHIPKLSAPDDSMRMGETTLAEGLGLPLSFGHAYLTLLVCLCGSAHFTL
NFKEHAVRRGAVMLLAEDTIALLKRRSRRFKVFFCLMPKSFAAEVAYPLP
NTLFVFLHDHPHCVPSKDDMPLIEDWVTQMRNIAQTCPTYQRIMLRNQLQ
NLFLKIAEQLPANQIENRGFSRKEMLSWRFWELIGKHCVRHRDVKFYADA
LNITPFYLSQLTKAFFNDTPKGLIDRQVTLEIKALLSYSDLAIGRVADEL
NFVDASYLCRYFKRQTGISLSRYRKHKREEGGQD
>PFL_2331 transcriptional regulator, LysR family
MDLRDLTYFDTIAELGHLGRAAQKLNRSQPALTKSIQRLEESFGTKLFER
EGRGIKLTAVGELLQRRSRQLQQNIAETHREVRDFASGVLGNIRLGCAAS
MAEHLLPQMTATLLERAPDITLNLVIGQDDLLRESLRSGRLDMVICPMFE
GDPHLSHHTLFEDRAVVVASRDHPIFATPMRLRDLCAYRWVLPGTRVSAR
RWIDNVFQSHELPLPSVQIETNTISLLPRLIAKTGLLSFLARETLDDFKG
IAHLREVPLAQTCMRRSIVVLVRAEGYLSPAAQALLDLLKSDGRQFFTAG
DAL
>PFL_4037 transcriptional regulator, AsnC family
MNASLDAYDLKLLAELQRDASTAQSELGLRVNLSTAAVNRRLKRLCDEGV
IERYSAIVAPDALGHELSIIVEVQVESERIDQIDALKRNFQACPQVQQCY
YVAGECDFVLIFCVRNMAQYTQLTRELFFDNPNVKRFKTLVAMNRVKVGL
EVPTAG
>PFL_4190 iron regulated transcription activating factor
MTEQVSTSRCDSPLLQAFVDNRLILVKIAARITGCRSRAEDVVQDAFFRL
QSAPQITSSFKAQLSYLFQIVRNLAIDHYRKQALEQKYSGTEEEGLNVVI
HGASPETSHMNFSTLENIAEALTELPSRTRYAFEMYRLHGVPQKDIAKEL
GVSPTLVNFMIRDALVHCRKVSGNRPDTFARR
>PFL_3998 transcriptional regulator, LysR family
MLNYRQLHYFWVVAKTGSIVRACDQLNLTPQTISGQISLLEQTYGIELFR
RVGRQLELTEAGRQALPYAEQMFQLGGELEAMLRARPDEQQIQFRVGVAD
VVPKSIVYRLIAPTMELSEPIRLTCREDKLERLLADLAIQRLDLVISDSP
MPSHLDIKGYSQKLGECGISFFATEELARRHGADFPRGLHGAPLLIPGQE
TVVRSRLLRWFAEQQLQPRIIGEFDDSALMQAFGQSGSGIFIAPSVIADE
VMHQYGVQLIGQTDAVAESFYAISVERKVKHPGIVAITEGARRELFTPLN
L
>PFL_4475 DNA-binding response regulator
MEQEAWQVLIVEDDQRLAELTREYLESNGLQVAIEGNGARAAARIIAEQP
DLVILDLMLPGEDGLSICRKVRDRYDGVILMLTARTDDMDQIMGLDLGAD
DYVCKPVRPRLLLARIQALLRRSEAPEPAVEKTRRLQFGPLVVDNALREA
WLSDAGIELTSAEFDLLWLLVANAGRILSREEIFTALRGIGYDGQDRSID
VRISRIRPKIGDDPEHPRLIKTIRSKGYLFVPEAAADMRS
>PFL_0770 transcriptional regulator, LysR family
MKARSDELQVFVCVIECGSISAAAEQLAQTPSAVSRSLSRLEAKLDTTLI
NRTTRRMDLTEEGRYFFEQAKLILDQMDELEERLSSRQRNPSGRLRINAA
SPFMLHAIVPYVAEFRSLYPDIQLELNSNDLIIDLLEQSTDIAIRIGVLA
DSTLHARSLGCSPLHILASPDYLARHGTPQSVAELAGHTLLGFTQTETLN
HWPLRHVHGDRWQIQPGISASSGETLRHLALEGQGIACLSHFMTIDDIRA
GRLQPVLASFNSGYRQPINAVYYRNSQLALRIQCFLDFIQGKLADYANPE
FQG
>PFL_4261 transcriptional regulator, LysR family
MNPNTLTEQLGLFLDVLEAGSFSAAARRHPLTPSAVARRIDSLENAVGTT
LFMRTTHAVVATAAGQAFAERARRIVAELQLARAEAVSLSHAPEGLIRID
APAAFGRRHLAPAIADFLVLYPGLDVQLHLIDSFVDMQGSHLGKVDLVLR
AGQRVDTRMVATSLASIVRIACASPSYLKSRGTPSHPAELSQHDGLDWDG
LAPLFAWRFELDGQVQSHRPQRIRLGANNAEALLSGALAGLGIAHLPTWL
VSEYLLRGELVPLFCEGGLPKPETAGIYALRMEQHPNARSRLLLEYLKSR
FSPVPPWDLALQSAMG
>PFL_3358 transcriptional regulator, LuxR family
MNHPERAPASLLQAFSELTLELQQLAQNRDIENLHQHALARISRLLPFDS
AWWGRAALVDGLPDEHSCYLYRLPPSYLPDWQSIRHIDVTVSRVHEVPGR
AVIVDMADPDNGPGLNWLGRQYNIGELLCVVHIDPHTHLNNHLALYRAPG
APRFNQGDCHLLNNLMLHLVAAVSANQIRTLVAMREKLTGPRNLALAVCD
QRGVLQCAERGFVDLLLHEWPQWSGPQLPMALDPGGFEGKSLQVESSAVG
DLCLLAARSRNLLPRLSPRENAVAQCFGEGKTYKEVARDLGMSPNTVRHH
IRAIYSKLGVKDKARIAQLLHAPPG
>PFL_5041 sigma-54 dependent transcriptional regulator
MTAKSLLTALLPLVTDLSRELPEGERYRRLLEALRALLPCDATALLRLDG
EWLVPLAVNGLSTDTLGRRFKVSEHPRFAALLSSPGPTRFASDSDLPDPY
DGLVEGLDDHLEVHDCMGCPLFVDERPWGLLTLDALDPQRFEPIELDALQ
AFASLAAATVSAAQRIERLAQRAENEHQRAEVYRQASGQNREMIGQSKAH
KRLLEEIKLVGGSDLTVLITGETGVGKELVAQAIHAASPRAEQPIISLNC
AALPDTLVESELFGHVRGAFTGATQDRRGKFELANGGTLFLDEVGELSLT
VQAKLLRVLQSGQLQRLGSDQEHRVDVRLIAATNRDLAEEVRNGRYRADF
YHRLSVYPLRVPALRERGRDVLLLSGYFLEQNRSRMGLGSLRLSVEAQQA
LLAYHWPGNVRELEHLIGRSALKALGNHPERPKILSLDAGDLDLPRASER
TSAPVEPASATQAMPAVAGDLRQATDHYQRQLISSCLERHQHNWASAARE
LGLDRANLSRLAKRLGLR
>PFL_3963 transcriptional regulator, LysR family
MSVSHAQLKAFHAVAVHGSFTRAAERLYLTQPAISDQVRKLEERFGVLLF
HRNKRSVRLTDLGERLLAITQRLFVVEAEAKELLQESRALQTGSLVLAVD
APVHVLPQIARFCELYPGINVKIETGNTDESLLRLFNYQADLALLGRAVD
DERLLSLTLRNDPMVAFVSRHHPWAGRQSICLADLDDTPLVLREVGSVTR
QTLEEEMNRAGLRIRPTIQVEGREAAREAVVVGIGVGVVSAAEFGADARV
CALPIVDCQRRLTETLVCLREQSSRRIVATFLDLVRESLASPTAL
>PFL_2376 acetyltransferase, GNAT family
MSTRIDMLMNPGPEVRAAILEPLRAHNRAQAGDPKPEAIALVVRDEHSGE
ILGGLQAEIFYRWMFIELLAVPEQTRGQGTGSQLLNMAEELAREKGCIGI
WLDTFDFQAPQFYQRHGFSEFGRLEDFPPQHRRFFLHKRLV
>PFL_4852 DNA-binding response regulator, LuxR family
MKRVLIVDDHPVVRLAVRMLMERHGLEVVAEADNGTDALKLALEYVPDIL
ILDIGIPQLDGLEVINRLMSRGMSIKILVLTLQVPGPFSMRCMQAGAAGY
VCKQQDITELLSAVRAVLAGYSYFPNEALHTFRSSQGISSEQQMIELLSG
RELIVLKQLTNGMSNKEIAEGLCLSNKTISTYKRRLLAKLNARSLVDLIE
FAQRHRLI
>PFL_3632 transcriptional regulator, LysR family
MHSPTDTPPHWDWYRTFLAVLDSGSLSAAGRAMGLTQPTVGRHIDQLEAA
LGLKLFTRSFDGFAATEAALELKPYLLQLAAGEAALRRVASSHGAGVQGS
VRISASEIIGVEVLPPILATLRQQHPQLVVELVLSNRADDLLQRQADIAV
RMFRPTQEALLVRRVADIELGLHAHRDYLQQQGTPLSLEQLAGHALIGFD
RETAFIRRLQQQYPMLARGAFAWRSDSDLAQLAALRAGFGIGACQVRLAE
ADPRLVRVLAEQFAPSLEAWVAMHEDLRNSPRCAVTFAALVQGLAAYAGG
D
>PFL_0202 transcriptional regulator, AraC family
MTEATSLASWTRALRKQLDALDLDSAALCREAGLDPQLMDDPNARYPLSA
TTRLWHLAVQASGDPAIGLRVSRFVSPTTFHALGYALVASGSLREVFERI
VRYHQVVSDALELALTREADRYRFFLKVPEGAPQPAFEAIDAFAAIYVRT
CRNRLGRDYAPLAVQLRRPAPADPSQWHKVFRCPVQFAAVDDCLEFGLHD
FDSHLDDANPELAEHNEAVLKRTLLQLRPLTWERKVRGVIEAQLPEGEPS
AERVAQALHLSLRSLQRHLADEGTRFDTLLNECRENLALLHLRDLECSLS
EISYLLGFADASSFSRAFKRWTGMTPGQFRDGLR
>PFL_1210 transcriptional regulator, Cro/CI family
MRSMQIRNVSTVLRELLDRDGISPTELHRRTGVPQSTLSRILSGKIVDPS
DKHISRIAEYFQVSTDQLRGRVDIAPARAAAPRGEIHSELKDISLWDDDT
PVDDDEVSVPFLREVELAAGSGRFVIEESERASLRFGKRSLRHNGVQFDQ
AKCVTVRGNSMLPVLRDGATVGVNAGKCAIGDIVDGDLYAINHNGQLRVK
QLYRLPTGIRLRSFNRDEHPDEDYSFQEIQEEQISILGHVFWWGMYAR
>PFL_1568 transcriptional regulator, LysR family
MEFSQLRIFQAVAEEGSITRAAERLHRVPSNLSTRLKQLEEQLGVELFLR
ERQRLQLSPAGKVLLDYAARLFALHDEAHAAVQGGQPAGEFVLGTMYSTA
AIHLPALLARYHRAYPAVNLQVQSGPSGELLEGLLTGRLDAALVDGPLEL
AGLDGVPLCDETLVLISEADHPPVRTARDVEGRAVFTFRQGCSYRMRLES
WFAHYHAAMGRAMEIESYQGMLACVIAGSGVALMAQSMLDSLPGRESVAV
HALAEPFARATTWLMWRKGMVGANLNAWIELQQGAGVQLAQQARAHA
>PFL_3340 transcriptional regulator, DeoR family
MIPEQRREQILRQLRKHQVLSVHQLMEMFDCSHMTVRRDIALLEQEGRAH
SVTGGVRIASQLHSEPSHQSKAVVELPQKQAMAKLAASLLHADMTVYLDA
GTSTLEIVHYIKALSGMTVVTNDFGVAQALMDAPQVTVIHTGGQLDHSNH
SCVGGLAVATLRQVVTDVAFISTSSWDLRRGITTPSALKVEVKQVAMQSA
TQVVLVASSSKYGTFSMYKIAGLEQFDIIISDAALAPAAADGIRKHGVEL
LLPAQS
>PFL_5787 transcriptional regulator, ArsR family
MRASLDCCPMNLPAPAISHDDCDELAALCKAGGDPLRLNVLRALSNDSFG
VLELAQIFAIGQSGMSHHLKVLAQASLVATRREGNAIFYRRALPHTGLLG
GKLHAALLEEVDQLNLPGEVQARISLVHRQRAAASQDFFSRVAEKFRAQQ
DLIAGLPQYRDSVLALLDKLSFDPVATAIEVGPGDGGFLPELARRFARVT
ALDNSPAMLELARQLCERETLANVSLQLADALNGVQLQADCVVLNMVLHH
FAAPAEALKQMAQLLQPGGSLLVTDLCSHNQSWAKEACGDLWLGFEQDDL
ARWATAAGLTPGESLYVGLRNGFQIQVRHFQRPAGDTHHR
>PFL_0253 transcriptional regulator, LysR family
MDQVKGMKVFVRIYERSSFTLAADDLNLPRATLTHTLNQFEAWLGTRLLE
RSTRRVRPTLDGQAYYPRCVQLLAELEEAELAFRTVEPHGRLRVDMHGTL
AKHFVIPRLGEFMQRYPQIELAISEADHFVDLVAEGVDCVLRAGNLEGSS
LIARRVANLQQVTCASPAYLARYGEPQSLDELGAHRAVNYVSRTATRSFP
FEFLVEGQVREVAIDGALSVFGAQIYGASALAGLGIIQCPRYHVARQIEQ
GSMREILCHTPPPAMPVSVVYPHSRHMSPRVRVFVDWLAQVFTEAH
>PFL_1883 transcriptional regulator, GntR family
MNEQLQPLKKQPRAGKAGRSGTQDDIVYAHIFEAILEQRLAPGTKLSEEA
LGEIFGVSRTIIRRALSRLAHEGVVLLRPNRGAVVASPSVEEARQVFLAR
RLVERAITELAVQHATAEQLLELRQMVNEERDSFSRGDRGAGIRLSGEFH
LKLAEAAKNAPLISFQRSLVSQTSLIIAQYESGNRSHCSYDEHTQLIDAI
EARDGELAVNLMMHHMDHIDSKLNLDEESASDDLHAVFSHLLQTKKPGRP
SAKL
>PFL_6150 acetyltransferase, GNAT family
MRQIQIRPVTAADHSAWLPLWQAYLRFYETELADAVTQSTWQRFLDPSEP
TNAALAWDGERAVGLVHFIYHRSNWSIESSCYLQDLLVTPDQRGTGVGRQ
LIEFVYTQAKQDGCAKVHWLTHETNATAIQLYERIAERPGFIQFRKPL
>PFL_0229 sigma-54-binding protein
MSAHTPFGQPLLTFPDAEKSPLSIRAKALVFVDPRSRQLREELEQLAPRS
VSVLIRGETGTGKELLARHIHRASDRSGLFVSVNCGAISPTYADAELFGY
AAGSFSGSASSRAGWFGSANGGTLYLDEIGDLPLPIQTKLLAALENHEVT
RVGAQQPSPVDVRLVAATSIDLAQAVAAGKFHERLYRYLSEGQLELPALR
ERVGDIESLAEYFLGIYSQRLDLPVPLISEAAQQALNRHSWPGNTRELEN
VIHFALLVSSGEEILPEHLNLPPTPSPLEQIQQLLQQIAEIGSAVERQAL
HQLLQRTALT
>PFL_3911 conserved hypothetical protein
MKSRPDDMTKRDIFSELVEGIDALTQERQGKITLRSHKVKLEKLPPITAA
EVMNIRQQLNLSRSVFAMYLRTNTRTLENWEQGRAIPNAQATTLIRLVER
YPDTVERLASLA
>PFL_0818 transcriptional regulator, GntR family
MGFDQIRQRRLSDDIVERLEGMILEGTLKAGERLPAERALAEQFGVSRPS
LREAIQKLTAKGLLISRQGGGNYVVESLGSTFSDPLLHLLENNTDAQRDL
LEFRHTLEASCAYYAALRATAVDRERLTQAFEELQDCYSRSDDVSRIEEG
AADAKFHLAIAEASHNAVLLHTIRGLFDLLKRNVVTNIGGMYKQRTETRD
MLISQHRDLYQAIIEGRAEEAREISSRHILYVQEVLEEVRQEVQRVARAE
RRKGM
>PFL_5683 transcriptional regulator, LysR family
MDFKQLRYFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFER
SSKRLLPTLAAHTLYNHALPLLDGLQQAREALRNFKGQALRTLAIGVLQT
VHTSLVPQMLERVRKAQPHLVVQIYELTGLEIERRLLNGSLDIGISYLPP
RQPGLHGVPLYEDELTLVIPEQHPLREFKKVSMSQAAELPMLLLGEEFQI
RQIWQAQLANLGRRPQVQAELNNMAGILDSLPHTRLATVLPGRSQQQHGN
KELLWKPLSEPRVPLKVGLVCRDLQRQQGTLELLRSLLEDSMNAQEPRLG
GTSAVEVPG
>PFL_3559 transcriptional regulator, LysR family
MNPRRLTPSMSLLIAFEAAARHCSFTKAADELALTQSAVSRQVQALESQL
EVSLFKREGRRIELTAAGALYQHELTAALGRIRSATLQTIAFKEEEGPLN
LAVLPTFGSKWLLPKMHEFYARHPRSLVHVHSRIIHADNPSSVSDMQAII
YAGKGDWPGYVSHLLLQEKLVVVASPKALPDSLEMSLNDVTNHLLLNVVS
RPNSWSDWFDLNKLDHQKMRTGPSFELTAHLIQAVSAGVGIGLVPDILVQ
DEIKSGALVKLFDPMESGRNYYLTCAARYQHYPALETFSAWLLSESAIVS
A
>PFL_4943 transcriptional regulator, LysR family
MISTRQLRYFVEIAECGSFSAAAERLFVAQSALSRQIKELENQLQTPLFE
RTARLPRLTAAGEAFFPKARNLLSELHKASELATQVGMGQLGTLRLSHSS
TVPMSGRLLQGIGSYLQHCPGASMDIAKLSSEAQLEELAQGHLDIGLLRL
PVLRQRAGVQITPLFAEPLLLAVPPQHPLALAPPAGGVDLAQLREEAFIS
IPHPQRGGLSYLSAELCMRQGFFPRAARVMSRKTTQLQLIQAGFGIALLP
ESMQDIAPASIRFLPLADADCQSTVALAYRQEPTPLVAQFVEHFCNHL
>PFL_4360 transcriptional regulator, LysR family
MKNSIQHIQAFLAVARSGNFSKAAAELHLSPSALTVQVQQLEEWLGVALL
DRSPRHVSLTAAGLQARGPMEKLLLDLDNIVSGSRDLAALRRGVVTLAAL
PSVCAGVLPPALRQFREQFAGIEVRLQDLVAHRIHAQVRAGEVDFGIGGR
ARLSHGLDFQPLLEDRLCLFVATDHPLAQRQSVTLKDLARQPIILTGRDS
SVREQVEALFDDSRLSLLPAMEANYMSTVLALVRQGLGITLLPESADDGR
EGLRRIAIKHPGVSREIGLIRRSGQQLSPAAQRCYELLRQNLAGKHR
>PFL_4041 RNA polymerase sigma-70 factor, ECF subfamily
MRSITIHAPLPQRPAMTAKPPRRPGFFEHYEELIGTWTRRLRNRQQAEDL
AHDTFVRVLESDAATVQQPRAYLHQTARNIAVDAFRREDRRGALEEQGVH
LSVSPSGDPEHFMHAIQLADSIERALGELPVNCRKVFVWQKIEGLTQAEI
AERLGLSKNMVEKYMIRTLRHLRDRLDGSAP
>PFL_4770 cold-shock domain family protein
MLKIVHLLTGIAALLLSLIPSLRSDAVPYLQQPDALYLALFGLLNLILAP
VIPYWNKGSRHHLQNLVSALLVLVVVLQTLTLLAPMPVIGGQPAVLVSLL
TALIAVVLHLAISFYKSSPSASATPSYDMSNRDTGTVKWFNTSKGFGFIS
RDSGDDIFVHFRAIRGEGHRVLVEGQRVEFSVMNRDKGLQAEDVIAALPR
R
>PFL_2433 transcriptional regulator, GntR family
MLELQRPDSLVVRVVNAIRTEIDSGRLAPESRLPTEQQLAEQLNVSRSVI
REAIAQLKADGVLIARRGLGSYISKTPAGTVFRFPQGDGRLPDLAQMFEM
RLWIETQAASIAAQRRDAADLQRMQGALQEMHDKRSDFEAAGLADVEFHR
AIAEASKNDYFVAFHDFLRSQLTSARKAAWENSALRMVGGSADATQEHQA
LYQAIAAGDRQAAAGCADAHLRASAKRLGLELPTID
>PFL_0275 S1 RNA binding domain protein
MLADFSSIASKPAVGLRLAITPQRLTLGIMRRLLCWAISDQYACGRFIFL
PGPAVFFRFHGSTGSLLIQVAARARPLNQTRRALFSCPRACFHNLSGGFM
DSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQL
RHLEERLRYLRELDERRISILASIEEQGKLTPELARDIKLADTKTRLEDL
YLPYKQKRRTKGQIALEAGLGELADGLFNDPNLAPETEAARFVDAEKGVA
DVKAALEGAKYILMERFAEDASLLEKLRNFLKQEATISARVIAGKEEEGA
KFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVGDELPGTMHPCE
GMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAET
EAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHA
TVYPHVPHNKWDQTLGILAALCAKHSVDLIAIGNGTASRETDKLAAELIK
KYPAMKMTKVMVSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDP
LAELVKIDPKSIGVGQYQHDVSQLKLARGLDAVVEDCVNAVGVDVNTASV
ALLARISGLNATLAQNIVSHRDEHGAFKTRAALKKVARLGEKTFEQAAGF
LRVMNGDNPLDASAVHPEAYPLVQRIAADTGRDIRSLIGDSGFLKRLDPK
KFTDETFGLPTVTDILQELDKPGRDPRPEFKTAEFQDGVEDLKDLQLGMI
LEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKV
KVMEVDIPRKRVGLSMRMGDTPGEKIDGARGSRPGSAPRSSQGNAPRKES
AAPAPSNNAMASLFANAKQLKKR
>PFL_6155 DNA-binding protein, putative
MTTTLEQRGLLIDNIRQELAAGRLSVGDAVKRLRTEVTGLHQSQFARMCR
ISLRTLIHIEHGDGNPTLKSLNAVFKPFGLQMGVVSLRP
>PFL_2567 acetyltransferase, GNAT family , putative
MITIREADSRDIDTLQAIGCATYREHFAAIWSTEGMQQFLAQDFAPAPLE
QSLADKHLHLWLLVLDPQQQPIGFAKLNWNRPLPDGARRGAELQKIYLLK
SEAGKGYGRRLLEHVLQRASAAGEPCLWLDVLKSNSGARRFYESAGLRQV
DEVPFSTDLEQIGMWVMACDLPLQNHPAQD
>PFL_6159 transcriptional regulator, LysR family
MRLTLRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRQLEELIGQPLF
DYVGKKLYMTEAAEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAVE
SSAKYFVPHLFAAFKRQHPEVHLQLTVVNRSQVIRRLSDNRDDLVIMSMV
PQDMELEFLPFLNNPIVAVAPPEHPLSHMGPLRLQDLEPYTLVLREQGSG
TRLACEEYFKEKRVHFTQILEVSSAEAQRECVRAGLGVALLTRHALNLEL
ATGGLIELPVEELPLLRSWCLVQAKAKRLSPVAHAFLGFIRSERVQISGL
VERFDGKPRVPPASN
>PFL_3027 transcriptional regulator, LysR family
MNSPHEWSGLSRLDLNLFRVFEVVYQERNLTRAASVLHLSQSAISHALAR
LRAQLDDPLFVREGYGVAPTPLAKQLAPGIQDALSGLRRSLNPAQAFDPL
RDRRRFTLNMPEQLEPVILPLILAHLNRVAPHLEVRSTSVHWADLKLEMI
AGRIDLAIELSRLTDPQLQQQLLLQDSFCVMAGPGFSGELTVERYLAAEH
VAVTSRRRGICVEDLALGHLGVVRRIRQHCQHFLTAAQLVAQGDGLLTLT
RNNAQLINAGLGNRILDMPLTLPEVCLNLYWSKQVQNESANRWLRGQLLE
LAGRS
>PFL_2406 transcriptional regulator, GntR family/aminotranferase, classes I and II family protein
MARARYKQLVDTFAADIRTGILAPGTRLPTHRELAAREGLALVTASRVYA
ELEAMGLVSGETGRGTYVRETALPPGQGVDQPATAPGTLDLNFNYPALPG
QAELLRSALRQLAATGDLEALLRYQPHAGRSHERATVARYLAGHGLVVEG
EQVLLVSGAQHGLSTTLMALLRPGDVVAVDALTYPGFKVVAEAHGLELLA
IPLSEQGPDLEAFERLCQRRRVRAVYAMPTLHNPMGWVLDLAWRQRLVAI
GRAHGLLIIEDAAYAFLAQDPPAPLAALAPEITVYISGFSKNVATGLRVG
YVVAPPAWVALIERAIRTSTWNTPGVMTAMACAWIEDGTVARLEHQKRED
AQARQALAREALAGLAYVSHPNSYFLWLPLPEEVRADQVAMALLREKVSV
STAEPFVGAGPVPHAIRLALGSVAMADLGVALARVRQVIGRYAF
>PFL_2190 PhnO-related protein
MPYTLQHLESEAALAASFDLMRVLRPHLTSPAAYVAQWARQTEQGYRLLA
AWDAERIVGLAGYRELENLLYGRFIYVDDLVVSPDLQRSGLGARLLSAVR
DEAVQRQCEHFVLDTGLHMPLAQRFYFRQGLLARGMHFTQRLEGGEPA
>PFL_2657 transcriptional regulator, AraC family
MNRGRVTPKVTPPDITLRSSMTALRLTTLHTTQAVLDAFRDSDVPAQVLL
EGSGIQLADLELPNSLINISQEMRVFSNAVQFRQDLGLVLGRNLHISAYG
MFGLTLLTSATLREGWSLALRYPLLLGTFFRLDLEVRDGLAWLTADQYSE
SELEVFNTDFCMSSYRVTCQDLLGCSLPLRQVQLMHGPQPYMDSYEQAFN
CPVQFNAGRNAIGFDLEWLDRRLPLADLVTQNDMLQRCIRLNEELSARPT
WIDQVRRILNEQLHAVPDFDSLARQVHCSPSTLRRRLRAQDTSYQQLLDE
LRYARAQQLLGQHSLPIYRIAEALGFKETASFRHAFQRWSGVAPGRFRQL
AGQLGPLSDCAED
>PFL_3052 acetyltransferase, GNAT family
MHGPCPLPTLAPMTIEIRRARVTDADFLPAIETCAAELFRSDAQLAWLAD
AAVADVPSHRANIQRHPVWVAVTADDIPCAFLNAEACNRELHVWEISVAR
GHQGQGIGKRLLQAARQYALEQQLEALTLSTFRELPWNEPFYQRQGFVTL
EQAQLGPRLCQVLADEARYGLPAARRCAMRLAL
>PFL_0746 transcriptional regulator, LysR family
MQKNITSLSTLNWDDLKFFLEVARTRKASSAAKRLAVDYTTVSRRIGSLE
TALGTLLFEKSRTNGFVLTAEGQRLLGYAESIESTLHMACEQVSGSGVAL
SGHVRMGCTEGFGTFFITPQLSHFLDAYPAISVDILPLPHFISLSKREAD
IVIALERPEHGPYVCCKLCDYRLQLYATQEYLDRHPPIRRPGDLGEHQFI
SYVDDLAFSSELLYLANVVPGASANLRSTSVIAQYVAAQQGRSLAILPCF
LAAQDPRLLPVLPKEINLTRQFWMYCREDLRKLKRITLLWDYIREVTEQN
RPLLMGESRSMRFAAP
>PFL_3220 transcriptional regulator, LuxR family
MNAPASLPGPHELGHRCIAAFTRVVPASLCAFYRIDAQLQARDFSLYRMP
EQMHQAYLQHFRHYDPLQPRHCAAAGRPVLSLHMGMAHQGHHESEVYQGF
LQRHGVLDVVEILACDGERPVAGLSLLRDVGLGHFSVEELGTLHALQGLL
EIAALAPWSQVDERLSGLTPREREIAWLLRDGADNKTIARRLDLGLPTVK
THLINLFRKVGASNRTELVRALFL
>PFL_0032 transcriptional regulator, LysR family
MYEALCDLSLDLLRVFEAAARLRSFTAAAVELGTTQPAISQQIKRLEEQL
GVRLFDRIYRGIELTESAALLLDQVQAGLQSIDAGLSALSQQHQHEVLQV
ATDFAFAAYWLMPRLHRFHEANPQVDVSLVTSERSHSMLRSDIDVAVLFG
DGRFRQGESHWLFSEEVFPVCSPLLLKDRAAPLPAPSLLELPLLHLRGEG
SNHWFDWSGVFRELGLAGAPAPGQLRFDNYTLLIQAAIGGQGVAIGWRHL
VDDLLEQGLLCRPIAESALSAYGYYVVLPQRKRRGPLIQRFVDWLMSEQA
GSAQSLKGLALPSIAR
>PFL_5111 DNA-binding response regulator ColR, putative
MHIHLLLVEDNLDLANTVIEYLEIGGIVCDHASNGQTGLNLALSQHYDVI
LLDIMLPRLDGQQLCEQLRQNGSQTPILMLTSLDALSDKLASFAAGADDY
LVKPFELAELVARIRALSLRRSGQASRLQVADLVMELTTRKVSRAGQELH
LSPICWTLLECLMRASPEPVTRERLEATIWGDEPPDSNTLKVHMHRLRKT
VDKSFDQPLIHTLPGIGIQLRSHA
>PFL_0806 DNA-binding protein
MSSDRAQPASSSHAHPLIDRTQVGARLRTIRKNQKLTLKQLSERSGVALS
TLSKMELAQVSVSYEKLAAAARALGVDIARLFTPAPNLIQTGGAQVQPTV
VSTTIADAPGYSTGNYDYHPMAGDFPGRSMTPMYARIFARELQQFEDYIR
HPGQEFALVLSGRVRIQFETGEAVSIGPQETAYFNSSIGHIYLAEGDEDA
EVMVVMSER
>PFL_1347 transcriptional regulator, IclR family
MASKVETGSVRSVERALAIVELIGQHQALGLEELHYLTGLAKATVSRMLL
TLQEQGWIYRGLSDRRYRLSARSLFGDSRQRFKRQMVEQAAPWLLELSAR
TGLVTDLSSFDGESLEVLESAVPEVLRKRYPSNSRIVGQHASLFHSAMGK
ACLGALASAEVERLAEQEQVPAEARQQCLESQHLGFGQRTEGHWEYPVRL
PFLIRAVALPLQAEGRVIGSIALHWPRDLACVEQVRNRHLWLLAETVERV
QKDIA
>PFL_3519 acetyltransferase, GNAT family
MSRRWDEVSAVPGWSDAQRRAFLHNQAELQRQHYERHYPEAQWLIVEQAG
QPIGRLCLHRHATEQRIVDIALLPAWHGQGLGTRLLRAILAQADAQGHNS
SLSVETASRARYLYQRLGFEPIEENGLYLQMQRPAQRPVREDLDNP
>PFL_6127 transcriptional regulator, LysR family
MNLESKWLEDFSALAATRSFSQAAERRFVTQPAFSRRIRSLEAALGLTLV
NRSRTPVELTAAGQLFLVTARTVVEQLGEVVRHLHHLEGGQGEVMQVAAA
HSLALGFFPRWIAQLRNEGLNIATRLVATNVGDAVHALREGGCDLMLAFY
DPDAALQMDSEIFPSLHLGHTEMLPVCAADAQGKPLFDLEGEASVPLLAY
SAGAFLGRSVNLLLRQRNLRFTTVYETAMADSLKSMALEGLGIAWVPQLS
VRAELARGELVVCGGAQWHVPLEIRLYRCALVRKANVRLLWRKLEGAAAQ
AAAT
>PFL_0652 conserved hypothetical protein
MRTPVTRFDAAEYLKTPEDMVAYLDACFEEDTGDGVLIRAALNDIARARG
MTQVARDTGLGRESLYKALGSQGNPEFATIIKVMKALGLKINVSNA
>PFL_2529 RNA polymerase sigma-70 factor, ECF subfamily
MPAPAQASDLTQLYRQQHQWLKNWLRLRLNCSHSAADLAQDTFLRLLAKP
EPVQIQAPRSFLAKVAQSVLSNHYRRQKLERAYLEALQHVPAHVVPDLET
QAILLETLMQLDAVLERQEPAVRQAFLWWQLEGLGHEQIAERLQVSVTTV
KRYIIKAGAQCILLDDSLGSL
>PFL_5043 acetyltransferase, GNAT family
MSQIHCLLMRRDLTAPLAAPQWPAGVTVYNYSPEHAQAVHQLMHLGYQDG
GGDVPVLDSWRQAFESDAEYDPELCLVARDAEGVIGVAQCWTSAYIKDLV
VHPRARGQGLGRALLQQAFILFAERREGCVDLRVLEGNLGARRLYERVGM
YIVRHETLD
>PFL_0173 RNA polymerase sigma-70 factor, ECF subfamily, putative
MSAAQSTSDASSDETLLARYRAGDPAAFEVLYQRHRQGLYRFVLSLCGKA
ELADEVYQETWLSLIRSTSQPQGRASFRTWLYQIARNRLIDHWRKHGQRN
PLHDSYDEQLHGEADQAPGPEQQLSLCRDQQRIEAALQDLPEDQREVFLL
RAHGDLELPEIASLTQAPLETVKSRFRYALKKLRRLLAEEVLT
>PFL_1373 RNA polymerase sigma-70 factor, ECF subfamily
MHCRSRLAGEEAAGLASLARAPSRASPLLRGGVFRARRRCWSIINLPGWQ
IAIILDIIRDLVLTASSRRISMSRSKPDSASADSVRGFYADILHFLRKRT
DNASDAADMTQDVFTQWLDYRDRAQVEQPRAFLFQMARNLLRDHWRRQQV
RSRAHQDGHHEQSLDNEPLADEQHEPLPAAQRLQRLEQLKEVLAQLSPRR
REALMLHRFEGLSQTQIAERMGISVSMVEKHIAFALLHCKQHLQRENGKE
QPE
>PFL_1484 transcriptional regulator, LysR family
MNRNELRKADINLMVVFEALMLERNVTRVAEKLFLGQPTISSALNRLRAM
FNDPLFIRVGHRMEPTARAEQIIQHLSPALDALSSALSLTHDFDPASSTM
TFRIGLSDDVEFGLLPPLLRALRQEAPQVVVVVQHVDYWRIPDLLASGDI
TVGISQTRGLPANAKRKLLRHIQPSVLRADASDTPLTLDEYCARPHVLVS
HTANVAGFADEWLAEIGRTRQVVLSVPQYSSLPALLAGTKLIASLPDYAA
AAMAASGQLYCEPFPFKTPTLDLSMVWLSHVDTDPAERWLRSRLEAFMSE
RAPLAS
>PFL_5801 ATP-dependent RNA helicase, DEAD box family
MSFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTG
KTGGFALPILERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFK
LYARDLKFVSACIFGGVGMNPQVQAMARGVDVLVACPGRLLDLAGQGSVD
LSHVEILVLDEADRMLDMGFVHDVKKVLARLPAKRQNLLFSATFSKDITD
LAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALLAHLITAGAWE
QVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEV
RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAI
SLVAPDEEKLLKSIERMTKQKIADGDLMGFDASAVEAEKPEVRERPDVRN
PRNPRGPRGDGPNGGGGGGGRKDKGKDKGGKEKPARGERPAREQKPREGT
PAREQRQPTPRADRAPDEFLDDDVDNFGNRADYVSPYQNKNNQGRGRRPG
APAQGAGAGNPPRGGAGGGQGRSGNPRNSNGSTTGTAPAKRSGGPRNGAP
RDSQGRRDEPRNRRPNRDDQPRQEPAVQNPRGNQPKIMHKESKADRFPTP
EQLDQLPSRPRGEKPALLTRNR
>PFL_5348 transcriptional regulator, GntR family
MISSSTVVNSVVEKLRAALARGQWRSGDMLPGQRELAEQLGISRPSLREA
VIVLETLGLVRSMPGKGVVVLDTPLDEAQNSDSAVAGASLEDVLQLRYTL
EPFIVGLVAQSISSKEVGQLRLTLMDMREALEAGDSEAGVNAYIAFHEEL
FTLTSNPIFQNVVQQTSNALKQSAQILRNSPEHLAERLEENEAVVRAIRN
KNSALASAEMRRHILQEGQRMGIELNIPDDHLGNSAQ
>PFL_2314 transcriptional regulator, LysR family
MSTPDLNLLLTLDVLLAEGSVARAAQRLHLSPSAMSRALARLRQATGDPL
LVRAGRGLVPTPRALELRQRIGQLVADAQATLRPAEQIDLGRLQRTFTLR
SRDGFVENFGPALVSRLRAEAPGVRVHFVPKLDRDSQPLRDASVDLETAV
IDADTSPELRTRALFRDRFIGVVRAGHPLSRGPVSLDAYVAGEHILAAHQ
GHAHGRMDEALKALGLERQIVTLVSGFSAALALARGSDLIAMVPERHTSN
LRHGLHGFSLPVPLPEMTISLLWHPRMEADPAHRWLRQVVHELCSQSALP
DHQPG
>PFL_4036 transcriptional regulator, LysR family
MDVLLAMRTFRRVAERSSFSQAATDLGQSTAAVSKQVRQLEERLGSLLIL
RTTRRMSLSEAGQRYFSECCHLLDELDALERATQAGLHEPGGRLRVNAPL
SFGLKVLSPILVAFMQRYPQLQVDLTLNDQVLDVVGEGFDVSLRIRRQLE
DSSLIARQLGQVEQIICAAPAYLQAAGTPASIADLHQHRCLAYRLAEHPG
RWHLQGPEGQTRLELPVHFSADNSLLLADMLVAGLGIGALPGFVAQPLLD
SGQLLRVLPDQHLPGRHIYALYPSQRHLSQKVRVFVDFLVEALQAR
>PFL_2573 DNA-binding response regulator
MTRILTIEDDAVTAREIVAELSSHGLDVDWVDNGREGLVRAVSGDYDLIT
LDRMLPELDGLAIVTTLRTIGVSTPILMISALSDVDERVRGLRAGGDDYL
TKPFASDEMAARVEVLLRRKNTVKDFDTSLRVADLELNLISREATRADQL
LSLLPTEYKLLEFLMRNTGQILSRMMIFEEVWGYHFDPGTNLIDVHIGRL
RKKIDPPGMTPLIRTVRGSGYVIAEPL
>PFL_0717 transcriptional regulator, LysR family
MLRFDDLQLFVRAADLGSLSAAARVMDLSPAVASAALKRIEEHLGARLLA
RSTRSLRLTAEGEGFLEYARAALSNLDEGRRLLASGQDQVSGVLQLSAPS
DFGRNLLLPWLDEFQREHPKLSVRLLLGDRIADLFRQPVDIALRYGEPED
SSLVALPVAPDNRRVLCAAPRYLARYGEPRQLEQLAQHNCLLYMLDSRAH
DLWSFHDGKREVSLTVSGDRLSDDADVVRRWAVAGEGIAYKSWLDVAADV
LAGRLQILLPELRCEGASLNLLCTHRAHLSKPVKLLRDLLQERCAQISAQ
RPR
>PFL_0956 transcriptional regulator, LysR family
MDFKQLRSFVEVIRQGGFTQAARTLHISQSAVSKQIAQLEQSLGTPLLER
QGSHIHLTAAGNVVLQRAEGMLRLRHELLSELDDLSQLARGELRLGLPLL
GSDALFASRFAEYRRRYPNIQVQLLEGGSLNVEQAVRNGELELGGSLTPK
DPAFAYQPFCDEPLDALLPADHPLAMNAQVRLEELADTPFLLYQRSFVLN
DRLLQACQQVGFTPREGGRSGQADFLAALVAAGQGVVLLPSVVARGLVRP
GVVRLTLKAPDYLRWDIAFIWRQGAYLSKAAQAWLALLREQPVSPAGR
>PFL_2382 possible ribonuclease inhibitor
MSRLPLQHIDLSQVTSTAELHLVLRDALGFPHWYGCNWDAFWDAITGLVE
MPEQLHISGWQALSRRLPRDAQLLLQCLERMKVQYPTLAADLLLEPAKP
>PFL_3459 acetyltransferase, GNAT family family
MQPTGNTRFTNRLARPGIFRFTALKRRQTGLGGPKLSKPPGCSPFLAVYL
KMRGCRRTVMTIAMKGFHSLQISVVKMNKPFITLCPEITRAHALTLMDWL
EDERVTCFLSDSRHVSRSIEQVIDRTQLPILTHLFNRDGRFFMAYDRHDA
PVGFVRLVKTGANCEIVLVIGDSDKWGRNLGARTIREGMKLAFLDMRAEK
LIAKIHPDNTRSLKAFQRSGFVLESETPTLKSFSMTAERYLQFLRKGTVV
DSTEIYITEIDKARLESLIVFEQGPTIVELEHELERAIVVKPQQVARNVI
TMNSRALLQLDDEEIEVALVYPEDADSTAGKHSVYSDIGAAILGYQEGDT
IDWRISDRTRRIEIRKVLYQPEAAGDFHL
>PFL_0260 transcriptional regulator, AraC family
MDVLTLIALEGAMGSSVAITLDVLRTANQVAEVMGRPTITWKIIGSSESV
RMRNGMRLDAQPLDKVQAIEGSMLVIPGLGLENTQELDFFGCRREKRLPG
LSLSSELITRLGHADIRKLSQLVHDHHRRGQQTAASCSAVFVLGEAGVLE
GHTVTTHWQLYETFKERYPEAILDTKRMLIHDGNMITAGAGMSQMDLMLY
ILRNKMGNQIAELTMRYLLIDGRPAQYHYMALSNLQTENREVLLMEKFIE
DCLPNVPPLSTIAEHLRITEKTLSRRIRSATGKPPMAFIQKVRLQHVQSL
LETTNMSIEEVAFKVGYADSTALRRLMWKNMGCTPSQLRKTRSGPPII
>PFL_3505 transcriptional regulator, TetR family
MAGRPREFDRHQALRQALELFWRRGFETTSMADLVAALGIASARIYAAFG
SKEALFREAIELYESQEGGFADLALQEPCAYVAIERMLQEAVALYTRADG
PRGCMVVASAVNCSSDNDSVREWLAEHRRARTASIIQRLEAAQQAGELPG
HSDATSLGDYYSTVLHGLSVQARDGVSAARLLQGVALAMQVFARTAQGN
>PFL_3701 transcriptional regulator, LysR family
MDKLNALKMFVVTAQLGSFSRAAEQLGKTPSALTKAVNHLEAELGSRLFE
RSTRRIVLTEIGRLYLETARQVLQRLEEVGEEVEQLQHGLRGNLKVTAPL
AYGQAFLDQVCGGFLEQYPQINLQVDLCDEFVNLLESGYDLALREGHDDL
PGLIARVVGSNRLALCASPAYLARKGRPVTPQTLEEHEWLLYRHPLLSRE
FWWVERDGQRLSLPQPQAPRLRSDNYDLLLANALAGRGLLHTPLWSAAPY
LADGRLVRVMADYAIDPDSFGPHILAVYPSHRRATAKVQAFIDYVSGFLA
SRGLD
>PFL_2585 SIS domain protein
MSRTDQPALSDRTPESDLASPPANAERLLQLITEEYESLPRQLKRIASYM
SQQSDRIMVDRISDIARECEVHPSAIVRFSQRFGFSGFSEMQALFRQAYT
HKATPVQNYQQRIRSLIANKSQKASDGDLARDCISATLSGIERLGLELDD
AAFEQAVDLVVNTDNIYVVGVRRSFAVADYLVYNLQHTNKRIHLVSGLGG
SYREQMRSIRPNDLVIAISFTPYAKETQHCLRIAQHNQAKTLIITDSTLS
PLAKRANSVLLVNEGSSFAFRSLSATLCLCQALFIAVAYRLELKMDEIHE
QGGFDD
>PFL_1360 transcriptional regulator, GntR family
MKAVSAEDPRTASRYAMIRQVLRDAILQGTALQGLVLLEAPLAELFGTSR
VPVRKALDLLHGEGLISRFDGRGYLINPQGLEIEPLRLPLSHAHLGLASD
EELVDTRPLGERIYEELGSALSTCIAFGHFRLDEQAAAEHYGVSRAVVRE
ALMRLRDRGLVEKEPYSQWLAGPLTAREVTEDYELRACLEPEALRQSAPG
LGRERLEQMLERVTQAQQAEHCGLEALERLEEDLHQQCLGGLQNRKMAAL
IRQAQSPMIINRIFYRLLGIGADPAMLAEHRLILELLLHGAYDAAALNLR
EHLQRARQRMLQRLKVLSVLPEPELPGFLSKIS
>PFL_2764 transcriptional regulator, LysR family
MFSSERLKGIDVFVCVADCGSFKAAAERLNLTASAVSKAIARLEGRLQAR
LFQRTTRSLALTDAGTAFYRTCSGVLADLEEAELALNAENSELRGRVRID
LPGTFGRSQVLGAVLRFAREHPGLQPHITFSDPGVEPLEAGADIAVRLGG
SGQWPAALGHRCLGREWHLFCASPDYLRSHGVPLTDQDLERHQCIAYGWV
DGRVSPWNFASGRPGESERRVMSASCVVGDGEGLLMAVQQGYGIAQLPSW
LVKRQLEDGSLVEVLPQWASEGQAIHLLWLKSRQGLPKVSALLEMLERNL
RG
>PFL_1867 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein
MMAVKVSIDTVSMMRSALQEGVGAKYKRLAETLEKAIADGTLAPGSKLPP
HRLLADKLGVTIGTISRAYAELERLGQVVARVGDGTYVRQDGLQRQRDSG
FRNVAEEPEALFDMSRNTHIPGQENHFIAQGLRALAEDPLGLQQIARYSA
EAGLARYRAAGARWLTQDGLQADPEQVICVNGAQHGLHVALLALLKPGDT
LATEHLTYPGLISTARMLGIKLLGLPMDAQGLLPEALDEACRQHRISALY
CTPTLQNPTAAVQSAARREAVAELCRRHNLLILEDETHAVLMERRPAPLA
HFAAERTVLISSLSKAVASGLRVGFLHAPSPLVGRLAAAVRATCWMATPL
PLELVAGWIDTGVAERLRQQQMAEIARRKELVTEVLQGLEWRSPEGCPHF
WIRVPEPWRASEIEADLKHQGYLVATAEAFAVGQAAVPQFVRASVCNTTA
DDRRLQDGFAALAAALKQESGLSRW
>PFL_5206 transcriptional regulator, LysR family
MAGSEINRFAEMETFVAVVECGGLSAAARLRQVTPSSVSKLLARLEARLG
VRLLNRSTRQLQLTAEGRGFYENSVRLLADLREVEGEASSARAPVGRVRV
NTSASFGLHVLAPLVAEFLQLYPQVSLDLVHSDALVDLLGEQTDVAIRTG
PLADSQLIARKLGETRGVVVGSPAYLARCGVPQTPEDLAAHHLLGFDYAR
ALPGWRLGAAGESQLLQPNGRVQASDGEALRHLALHGAGLAQLAAFTIAD
DLASGRLVPVLEAFNQAPLESFYALYVGQGGHVPSRVRVFIDFLALRVRL
>PFL_2429 transcriptional regulator, DeoR family
MQGQHPPAELPSLRRQKILLLLERDGKVMAAELSRHFAVSEDTIRRDLAE
LDAGGLVQRVHGGALPRPKDSGKDYFTRVGETNEAKLRLAQYAVQWVQDG
QTVLFDSGSTTLHIAQSLPAGISLTAVTASPMIAVALAEYPKVRVILAGG
QLNPATLSASGHEALRMIQGIKADLMFTGVCAIHPEIGISSLHFDEVPIK
QAMFDSASEVIAVTTADKLGAMEPFVVVPCNRLHRLVTEQEAPGVDIEGY
RQLGIEVLQV
>PFL_2652 conserved hypothetical protein
MSSLERAIALAAQAHAGQVDKGGAPYILHPLRVMLRLTHPEARIVAVLHD
VLEDCPITPEQLRGEGFSEEVLAALLALTKVAGEDYPAFIRRAGANPLAR
QVKLADLAENSDLSRIPEPGAEDLRRLEKYRQATDYLNSLACD
>PFL_1999 conserved hypothetical protein
MGIRDLVADVDEVVFEVLADTVYIEGREVLGMFSAPWLQPKLGKMNTGLR
EPHLVIRVSDAEGVEVRQQVRIDLPAHDGGGLYTLVLIEPGGDGLVSLIL
RINP
>PFL_2491 transcriptional regulator, TetR family
MSVKTSPVAKRAAQPRPRTKPAEVRLEELMAAAQDLFLSQGVEATTISEI
VERAEVAKGTFYHYFQSKNDMLVALGQRYTQHYLQRLEQAVAACPEDDWV
AQLSSWIRTSVQAYLDTYRLHDIVYPNHHHHDRGNPEKNTILEQLLGLLE
GGQRAGCWSLAQPGVIASLIYAGVHGATDDVIAAGEDDGRALAEAIVQAC
LRMLGLPPS
>PFL_0952 transcriptional regulator, MerR family
MPVMTELAPAPHAPEAVRQDELFPIREVARLTGINPVTLRAWERRYGLIQ
PTRTESGHRLYSMHDVEAVREILGWIERGVAVSKVGKILAKGRAAQAQLK
APVDGGLQGEYGQWRDQLKLAVSAFDEEQLERLYGQIFSSYALPVVFQDI
FLPFWKQLLLAREAFGQTSEWLFLDGFLRARITQRLLLQRATQSRYLLLT
ALNEQCRELELLVAALMLGQDPIGVRLLGPGVPLEELTLVCEKVAPVALV
VFSNHAPSAELPKRLKRLALTLDCPLLLAGDAADLAQDSLVGSPVACLGN
EGRLMQQRLRGFL
>PFL_3468 transcriptional regulator, LuxR family
MSAPANTSTAPLSLPALQAWHACLAQAFGSVDDGTFLQHLATALNALTPI
ESMMISLERKGLPPQLLHERGIVGAYRDEIINRYFSRGYLLDPFCLAVEN
GLAEGFYHLSEIAPDDFFSSEYYKTYYLKTGGAEDSYYIVDLDPQSKISL
CMFQGLSGERFASEPLALLRAVEPLVRELIRRFGGSGLQPLLRQASQDAL
PAPAPANFNQQIEAAFMSFGQPLLTVREREIAHLILRGHSVKSTAKVLEI
SPETVRMHRKNLYTKLTINSQAELFALFIDWLTQPAPTSQSPL
>PFL_2544 acetyltransferase, GNAT family
MLMKIRPRVAADDALLTALWERSVRATHDFIAEDDIQRLYPLVRDSYLPA
LEAWVWENPDASPGGFIATSDDTVQMLFIEPAQRGQGIGRKLLDHVRRPG
LKVDVNEQNPQAHGFYRRYGFVDCGRSETDGEGRPFPIIHMQLQDQ
>PFL_0517 conserved hypothetical protein
MRLSELKNSGRSPTLPLSLELADAAGPAQLQLLSLLRVLPGQRYVGAGVW
RGRPVLAKLLVGSKAARHFQRELQGVRLLAEQGLTTPLLLADGLQEGEGG
WLLFELLQGAQSLGDAWKQVEALPVLADEQAEVLAEALGAIGQLHAKGLW
QSDLHLDNLLRHDNRLYLIDGAGICVEEAGKPLSRQKVLENLGVFFAQLP
KSLEPFTEELLVHYLLSNAEHALPLEALQKQVNKVRGWRLRDFLNKVGRE
CTLFSVQRGPFALRAIRREEEAAMLPVLEQADALLDQGHLYKTGGAASVG
RVEVAGRPLVIKRYNIKGFAHWLKRFWRPSRAWHSWREGNRLAFLGIATP
KPLALLERRFLWLRRSAYLVTEHLPGPDIIERFAPFVDSGQAPEPELLAL
DQLFAELIKERISHGDFKGHNLFWQEGRWALIDLDSMCQHSSLSSFALAY
ARDRARFMRNWPQDSNLYQVIDQRLPKTAQGTEA
>PFL_3706 transcriptional regulator, AraC family
MQIKAADAHDQLALVSPFLLQTLADVAEAKGVSAERLCRGLGFTLDDLQD
PTLRISYRQAVAMIERALAALPQQGLGLWVGSRNVLGTLGLLGHALSLCR
TLGDAFELGIRHQHTSGTIVSADVGRQGEEFFVELQCRLPYGEVQIFAAE
EFFASLLIYGRALVSADFQALRVEFMHAAPAYAELYTRLLGPHVQFGCLQ
ARMVIEARWLQAPLPNHHPVALRQALKLLELESAQVHQKMDLIQAVERAL
SRDLRAGSHIEQVAGDLNMSGRTLRRRLTEHGLTFEALLERVRQARTLNL
LGNPELSIERITEEVGYSDVRSFRRAFKRWTGLSPSAFREEAALH
>PFL_4691 ultraviolet light resistance protein A
MYSIWKSCVMSFSILGPIAEGGRKLPLCLFRVPAGFPSPAADHIEQQISL
DQVLNIRAPHVYLVSISGESMQGAGIFDGDLAIVDRSIEAMHGHIVIALL
NNDPVCKRVCLRGKDIVLLSENPKYPPRYVLEGDELTIWGVVTSSVRSHV
>PFL_2475 transcriptional regulator, LysR family
MDRIECMRAFVVTVDENGFAAAARAMDVPRSKVSKQIQALEEAIGVQLLQ
RTTRSLRLTEAGAEYYESVREVLATVDEAEQRARDGIAELRGVLRVNAPM
SFGLRRLGPLVPLFHEQHPLIELQLVLSDQQVDPLRGGFDVTLRIASLPD
SSMVARQLAPAPRIMVASPTYLARAGIPRQPKDLSSHQCLNYGYLQSGVS
LQLSNGSDVQRVHVTGPLHANNGDLLAQAAEAGMGIALLPDFIVEDALAA
GRLVPVLCEWQAPPISINVVYPSARRVPQKTRAFIDFLAGHLTHKTAG
>PFL_4412 transcriptional regulator, TetR family
MAIKEGLRPGGRSARVQESIHTAVRELLEEQDRSSLTVPQIAARAGVTPS
TIYRRWGDLSALLADVALERMRPDSEPANTGNLRGDLRAWAEQYLDEMSS
EPGRNMMRDVQCSATPGYCVTILSGQLQCILERYQGHTEHLPDIDRLLNL
LVAPTVFRILFSATPLPLQELHELIEIALQP
>PFL_2956 response regulator
MLKLRVGVLEQHNIVRHGLYKHLSRQSVLCLSEFFNFADMLEALEQEQLD
VLMIGHLMDSDPVHLVRNLSTRYPDLKILVLLNRPDPVIASQLQAVGAHG
VMSKTQSLPDYADALRSLARGERYAMLSDGRASMEKPLYDA
>PFL_2688 conserved hypothetical protein
MAGRTNCIGRRKLPAKRRGCETAGPFTRIAQAMSVALFTSPHLGLALRRW
RLLHRVKQQHAAELFGVAQSSISRWENGRQAMEPAERARLEQLLAANLSA
AADQALARLVHDSPRAVHLVCDLTHRLLACSVTRAGQFGVPLSELLGQSL
WGFCTEEIVRKEAALDDLGWREVLAPPSLEFFSGHNDSAIVPIAPSQCRW
TRLNLSDGNAVRLVETL
>PFL_5000 transcriptional regulator, LysR family
MITDLPPLNAVRAFAAAARHLSFSRAAEELHVSHSAVSRHIKLLEEHLGV
LLFERRIRQSVLTPAGQAFHEQVSVALAQIANAAASLRRGAALRKVTVNV
RPSFAVRWLIPRLPQFMALYPQIQPEVVTSTLLPDPAKETFDLVIRRGRS
GWATTLQPQRLLEDEILVVAAPSLLHSTALNSPDDLPRHTLLVSRTRASD
WQKWLEHCGLKPLRTSPTLHFDHMHFVLQACVDGLGLALCPASLLAKDLA
SGRLICPLPDLRQPLTRYYYALASDAAPEAQVFIDWMLAQIHQDAMDHQA
QQLAGNAGQRP
>PFL_3919 transcriptional regulator, MarR family
MKHFTPDEFKTCHLGLLLGRAALLKDRIIDTHMEPHGITAAQFKVLIIMA
QFGVDTPAELCRHLSLDSGSMTRMLDRLEQKGFLARQRSEGDRRQVQLTL
TEQGQQLTDRLPQIGADAMNELAGAISPDELKTLEYILKKILLAAGDPIT
IQRLGEHNEQ
>PFL_5261 TfoX C-terminal domain superfamily
MNDELQHLKNLGKTSAQWLHAVGIHSASDLRRLGAVDAYRAVRTRGFRAS
KVLLYAIEGALMDMHWNDLPAERKEALNKQLDAISSRHKN
>PFL_2566 sigma-54 dependent transcriptional regulator
MSLIATDLVPPPMSALVSYLEHDQQPTIVLDTDYNIIAANTAYQRQFGVA
GKPHVGAKCYRVSHQFAVPCDQAGEHCPMRKAHDSRVPERMLHIHHTPRG
PEHVDVELRPIIGQDGTVVAYVERLSSVAVASVQPQQKGLVGRSPAFNEA
LGALQRAAPAPIPVLLQGESGTGKELFARALHDGSPRASGPLVVVDCTGL
TESLLESELFGYEKGAFTGALQRKIGLAEAAHGGTLFLDEIGEVPLAMQV
KLLRLIESGSFRPVGSLRTVHSDFRLVAATHKPLKEMVAAGTFRQDLYYR
ISAFPIRLPALRERSDDLPLLIDSLLRRLDPGVVPRVDPQALAQLSLYTY
PGNIRELRNILERARLFSDDGVIRLADLPPELRSTPAPAPPGRRRGNKDL
EQLAHALEVFEGSRSELARALGLSERTLYRRLKALGL
>PFL_4713 conserved hypothetical protein
MATHNVIVPNPMEQSIDQLVRDGRYQNFSEVVRAGLRMLLEHEASESARL
EALRNATSIGIMELESDQFDAVTVEDLEAYFENLGQLASEKE
>PFL_2036 acetyltransferase, GNAT family
MPVDFTLRPAQREDALCISGLATQVFLDTYATDGMRSDLAEEALSVYAPE
QFRQRLEDPHRSLLLAERNGHLLGFAEIAGNTRPPLAGLADGMELVRLYV
QRHAHRQGVGQALLQQVEERLQASDRPCLWLAVWAQNHRAQAFYQAQGYV
CAGSTAYEFGGNAYANQVFCKRW
>PFL_1082 transcriptional regulator, GntR family
MNHLLALRPDDSQPTPLYLQLARNLEAAIHAGQWKAEQALPSERNLSELL
GISRVTARKALEVLFEQGLIRRSQGSGTFITPRLEQPLSRLSGFSEMLRL
KGFVPGSQWLERTLTPPTHEELIRLGLSPNDKVARLKRLRKADDTVMAIE
MSTLPASIIAQPEAVGDSLYEYLDGIGKPVVRALQHIQAINASDEFAALV
GIAPGTAMLLMTRVGYLEDNTPIEVTDTYCRNDYYDFVAELRR
>PFL_4002 transcriptional regulator, AraC family
MSTQSFTRGPSSALLLLGFGCEKGLAPARLLAGCGLSREQLQNPNSLLSA
AQELRLASNLLALLGQPRGLGYAVGARYHFSTYGLFGYGLISSATPADAL
ALALRFLPLTYAFAEIGYRLEPGLGVLTFAEPRVADPLLAQFLLQRDMAA
AATLMQEIVGADFRLLRFGRSVSPELEGDEPAQILGVPADYRADANTLAF
DRRFLQRPLPQANPLTVAMCEQMCAQLLERRQAHQGVAALVRQHLDALPA
ASVPDLPAMARLLCTSVRTLKRRLQEEGTCYRQVLAGHRGARALELLGNP
RLSLSQVAERLGFSDLSSFSQSFKRWFGVAPSVYRQERCG
>PFL_1337 transcriptional regulator, ArsR family
MSLDLDEIIKALAHPVRREILHWLKDPTVEFPDQAHSNEHGVCAGQIDQR
CGLSQSTVSAHLATLQRAGLISSRKVGQWHFFKRNEETIQQFLTQMSQQL
>PFL_5380 RNA polymerase sigma-70 factor, ECF subfamily
MDLKGLFLKHAAALRGYLARKIRDPQLAADLVQESFLRLAEHTRGERIDN
SQGYLYRTANNLLIDHVRQEARRKTETVPHEVLADIEDEAAGLEAQAMAQ
QQRKALKQAIMELPPRTQEIFRLNRIEGMTHAEVARHLNISDSSVQKHLS
RALAYVMQRLQATDGRPVDE
>PFL_2150 transcriptional regulator, LuxR family
MNSQILFPHIGKVIASTGSRNFPRMLHDLILTQLAVDATHITQLRADPEQ
AIGRTGNTLMQTRHPLYSDAHASNDPLLLTGFPEQPGEPAPGPSLQRQRG
HADPAQLHLTGRKDSYHYVLSVYRSSQDQSFSPQERLLLEDISPLLLPMV
EKHISALQPRGDAAEQDSAAIEGLANLRLRFAARLEQSGLRLSNRELEVC
VGLLAGRTAPQLAEQLKLKVNTVESYLKRAAIKLGISGRHSLLRWMYSPE
EQAPHSSETPTA
>PFL_0966 transcriptional regulator, IclR family
MEKPRSISDSTGKQKVRSAEVGTDILKALAELSPATSLSRLAEHVQMPAS
KVHRYLQALIASGFAEQNSATNHYGLGREALRVGLAALGSMDVLKVATLP
LAELRDELNETCFLAVWGNQGATVVHIEPAVRAVTVVTQLGSVLPLLSSS
TGLVFNAYLPQRETLDLRQQELATGSPHALADKQVHDALAEQIRQRGLHH
VHGLLMPGVDALSAPVFDATGKIAAVLTVVGPTSLFHADEHGPAAQRLLA
ASSAVSWRMGYQPQ
>PFL_2702 DNA-binding protein
MNQSSKTPPASAPPETGTDNQAPGGPQFLGTRIRGLRKRRGLTLSELAQQ
SELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFFASETQTAPEDQG
YVVRKKQRLQVNYENGIIDQLLTPQPTRQLEFLHSRFPPGTYSKESYSHE
GEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVL
WVITPPTF
>PFL_3630 conserved hypothetical protein
MTDRPKRSGRPAAGRELSLDQVLDVGLELLEELGPQGFGGRALARQLGIT
PMSVAYHVGDQRNLMRLLVERVHAEPLAEPAAQWPPEARIQALLGEYMAR
VRRHPALTLCVLGDPQLFGGSLATFSQRLREEVRAFDADPALFDLLVDYS
HGHALALALAGEGAQALEGAFEAGLRRLLR
>PFL_1808 transcriptional regulator, GntR family/UbiC transcription regulator
MVDELIRRIESGLLEDGFQLPGEHQLAEEFGVSRGTLREALAELKRRNYI
ATQSGVGSIVTFDGVALDQHHGWAQALADSGALVNTEVLRLEAIQRPDLK
HRLGTDQFIALDRRRRSTDGRVLSLERSLIPASGELEGLPRVGLIDDSLT
ITLAAYGYIGERGDQWIGAEPLNAEDAQLLGRAPGEVFLKALRTTYDRQG
RFMEQVESLLDPQHFRMHLQFGEPR
>PFL_4468 transcriptional regulator, AraC family
MDGPACMRERTIASHFARAALGGARRQGYDYAPLLHQLGITPELLNQPKA
RIAPEQFTRLLQQLWLELDDEYLGFGHGPSKRGTFAMMCHALIHCRTLEK
ALNRGLLFYSLFPEAPRLSLTREGEMARLSLDDSELWDPEHFLSESLLVI
WHRLGSWLIGQRIRLEQACFSYPKPDHGAEYDLLFPCPLQFTRERSSLLF
HSRYLGMPLLQDERTLKHFLERSPADLLSRPDEGDSLSSQLRRLLSRDRE
HWPDLESVAQHLHVSPQTLRRHLREEGSSFQELKDELRRDIAIYHLGRAD
LSLQQIAEQLGFSEPSAFHRAFKKWTGLTPGAYRAREQ
>PFL_6142 transcriptional regulator, AraC family
MLHSHLTTLNAVSLILNTFKDQGQAGGALLAGSGINPADLSRADTRITTN
QEMLVCANAVALQRDIGLELGRRMHVSSYGMLGYALLTSATLGDALRLAL
RYPALMGTLFELSLETDGSRIWLTAADYRESPALAAFNTEFCLVSLKVIC
DDLLGHALPLLGARFDYPAPDYQQRYREPFDCPLQFDAHSNAFAFDQRWL
DQPLPLADVITHQAMAERCRKQNTEFTGRQAWLGRIRQLLAAQLDAAPGL
EGLAEQMNCSARTLRRHLRDLGCSYQELLDELRFERAKQMLCEDQMPIYR
IAEALGFSETASFRHAFIRWSGVAPSQFRP
>PFL_4302 transcriptional regulator, TetR family
MRYSPDHKAQTHQRIIKEASERFRRDGIGATGLQPLMKALGLTHGGFYSH
FKSKDELVEEALRAAAQELDAHCAALFAQEHPLPAFIDNYLCEWHQKSPH
QGCPLPTMSSELGQRGQPSATTDEVLNTRLEQLESVLEGEQKAERSLMLM
STLVGALMLSRSVENPELGTRILEVVREGLKQQERR
>PFL_4301 transcriptional regulator, GntR family
MSDGLSLADHITVELRADIIGGRLLPGMALVESELVSAYNASRNTIREAL
HRLGQEGLTWYVRHKGVVVRRLGADDVRDLFRVRRTLELQAIANARPLRE
YQSDRMLDAIEAAELAREREDWRAVGTHGLRFHQRVVGLLGSPLFDEFFT
NVVAQLRLVFCTAPDEARFQAPWLVRDRQIHEWLLEGDKAAAIEAMELYL
DDSERLLLDMLNQSLCH
>PFL_5760 transcriptional regulator, AraC family
MTSFNSGAQPQNRAPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELY
RWTTLSVDGGQVWASDGLQITPDAAMHKAPSLDTVIVCGGIGIQRTVTRE
HVSWLQSQARQSRRLGAVCTGSWALACAGLLDGFDCSVHWECLASMQEAF
PRVAMSTRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGRELSAAISEMFV
YERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYV
AVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCG
FVSTPHFSKCYREYFGIPPRDERIGSNTTQQVAMMPLPQAMVLAPLSGPL
SALSQARNESTFASVRL
>PFL_1238 DNA-binding response regulator, LuxR family
MATYEILIADDHPLFRSALHQAVTLGLGPDVRLVEVASIAELEVRLTEKS
DWDLVLLDLNMPGAYGFSGLVLLRGQYPQIPVVMVSAQEEASVMVRSREF
GASGFIPKSSSLEVIQQAVRSVLDGDVWWPPQAFEEVSVSAEAKAASEGL
ASLTPQQFRVLTMVCEGLLNKQIAYELSVSEATIKAHVTAIFRKLGVRTR
TQAALLLQQLESISSH
>PFL_1533 RNA polymerase sigma-H factor AlgT, putative
MAAADDTQLLERLLAGEQKAYKELVGTYQSAMRAVAYAIVGNRHADEVVQ
DAWLSVVRNLAGFQGRSSLKTWLLTITANAAKSRYKQNRREVLLDDLPAP
HGTVGDERFSSSDGHWLVAPFAWHEDTPEALLTESELRDCLEHTLLSLSE
LQSSVLLLRERQGLELEEICNLLGLTLSNVRVLLHRARLKVFATVEHFEE
TGQC
>PFL_4267 conserved hypothetical protein
MRAAQTAYETATHEENIAENKYDTLGLEASYLAAGQARRVEEIRQALGLW
QNLSLRPYDPQKGIQIGALLGLEDENGHEQWLFLGPDGAGLKVYVVGQLV
TVITPRSPLGKSLLGKFEDDEVEIVVAGARQQFTVTEVR
>PFL_2680 transcriptional regulator, AsnC family
MDRIDQKILAELQADGRLSVTDLAERVGLSLSPCHRRVRALEQSGVILGY
RAQLAPSALGLNFSAMVFVTLREGDHQAVAAFETALQGIVQIVEAQRLFG
EPDYLLQVITRDLPAFQRLYDERLSTLPNVQRLTSTLVMKQVIQDRTLPL
>PFL_3479 transcriptional regulator, LysR family
MSHIDLNLIRTFVTLYEARSVTLAAERLFVTQPSVSYGLARLRELFDDGL
FSRTRDGIQPSQLADELYPAFRESLTRIENTVHSTRRFDPATTERRFRIA
LSDLGEMGFLPLILARLNQQAPEAEVEVLPLQVDQAGEWLSSAKVDALIC
RKPLTGTRSQVLIRERYVCLLSDRHPRIGTQLSLEQFLAERHIAVTRTTG
HGSVEDVLKQMGARRRISLHVPHFSVLPKVLPGTDLLTVLPAQIARLFTL
EGGLRQLELPFSVGEFEVSLHWHPNSDSSAALSWFRQAVAAAIIDGQS
>PFL_5221 DNA-binding heavy metal response regulator, putative
MRILVIEDEPKTADYLHQGLTESGYVVDCANNGADGLHLTRQHAYDLVIL
DINLPHIDGWGVLGQIRQDSSTRVMMLTAQGRLADKIRGLDLGADDYLVK
PFQFPELLARVRTLMRRSEQAPVPDVLRVADLELDQGRHRAFRGKQRIDL
TTKEFALLHLLMRQSGVVLSRTQIISFVWDMNFDCDTNVVEVSIRRLRAK
IDDPFERKLIHTLRGVGYVLEERD
>PFL_2511 acetyltransferase, GNAT family
MPLCLRNAQQDDTQRLSQIARQTFALACPPDTPATEIEAFIQENLLPEHF
SALLEAPGKQLRVLLDDNRVIGYSLVNLHPQDLGVAGADGIAELTRCYLD
AAHHGSGAAQFLLAQTLAQQPGPLRLTVNEHNARAIRFYQRNGFVRVGET
LFPCGADLHRDWVMLRR
>PFL_3463 transcriptional regulator, LysR family
MLTNLSDVDLRKLRIFCTIVEAGGFTAAQVRLNTSLPRLSTLVRDLEIRL
GYSLCRRGKSGFQLSEQGAQTYAAAQELYADIDRFHRRVVMLNEKYPEFL
QIGSVDNLLSLDQAPLPQALASFRLVSPSTRIDLQVMRADELEQAVLEGR
LHLAIGCFNHQLSGLHYQALFEEEQNLYCGRGHPFFARPDEHFTDEEIGA
ADYVDRGYMLESRRPHKLRFGNSVSAFSMEAIATLIASGTCIGYLPTHYA
DIWVARGMLRVIAPQRLRYNAAFHSITRQGQVPTESLAKLMQALQAAKHS
VTLKSSSRA
>PFL_0633 tabtoxin resistance protein
MNAAQLRLVHGESFAHYRQGLIELLLDSVQHGASIGFMADLDDSQARSYL
SSVQAGVEDGSLLLWVVVRDEKVLASVQLALCMKANGRNRAEVQKLQVLH
SARRRGLGQQLMNALEQAARQHKRGLLYLDTEAGSAAEEFYRALGYTRVG
ELPNYCQSPDGTYTATAIYFKTLGQPL
>PFL_4908 transcriptional regulator, PadR family
MREHHHPPHREHGDSHEIFERRPGRERGGRGPRVFAPGDLKLLLLALIAE
QPCHGYDLIRQIESMFDGAYSPSPGVIYPTLTFLEESEMIQGDAEGGKKR
YSVTDAGRLSLQEQAIALDGVRMRIEVSKRSLRGHDRPAEIHEAVHNLRH
ALQMHHGRWSPEEILRVRDLLNNTAKAIVDGPVSHPAPEKSQ
>PFL_4557 transcriptional regulator, TetR family
MTESIPSPAAPHRAPKQSRGHERVMAILDACARLLPSQGAANLTMHGIAR
LAGTSIGSLYHFFSDKQQVLEALGQRHIEALSTITSDLLAVAPQVWTGSS
GRQVIERMVLPILEYLEQHPDLLLMINPGVAMGQLQAPDLRLQIKSVYRQ
VLALRLPRASAAEREAYAMAMLGLPIGLFHLALEHPEFKSQLLLEEVPRA
LEAYLAAIEGRHPAP
>PFL_1549 ATP-dependent RNA helicase SrmB
MHKETRPSRSKPVPYAAVFLHIFEVAPVFSQFALHERLLKAVAELKFVEP
TPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIK
TLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPD
ILIGTPGRMLEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDEC
PNRQQTMLFSATTGGSGLREMVAKVLNNPEHLQLNSVSQLNETTRQQIIT
ADHNQHKEQIVNWLLANETYQKAIVFTNTRAMADRIYGRLVAQDYKAFVL
HGEKDQKDRKLAIDRLKQGGVKILVATDVAARGLDVDGLDLVINFDMPRS
GDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIERYLKQSFERRTIKE
VKGTYSGPKKVKASGKAVGVKKKKTDAKGDKKKAVAKAPTKRKTANRPKS
DSLVSQDGLAPLKRRKPQAPAAE
>PFL_4690 conserved hypothetical protein
MHMNALNQPLATLPLNINLTDFIDEFGDELLESLNRSNPPVYTGVAHEQR
QAVMDNLKRKPFAAQADVVQASAALLLDRNEQAAIINAEMGTGKTMMAIA
VAAIMHSAGYRRTLVISPPHLVYKWRREILETIPDARVWVLNGPDTLIKL
LKLRDQLGLTYDGRQEFFILGRVRMRMGFHWRLACSKRRASGGQQLAACP
DCGRVLEDLEGNLITVDEFERGDRRRNCNACNAALWTLMRPGKADGGDRR
STILKSMCRIPTIGPVRAERLLNDFGEDFLASMLVDNVSEFINLMDTKGN
FIFSDRQAKRMERAMANIEFGFGEGGYQPTEFIKRYLPDGFFDLLVVDEG
HEYKNSGSAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRILTRQ
MIEDGYRPNARGSMAPAAMAFMRDHGVLKDIYTERDGDSHKTAKGKKFSV
RTVKAPGFGPKGIHRFVLPFTVFLKLKDIGGNILPTYNEEFIDVPMAPGQ
ASAYQSLASKLTAELRQALARRDTTLLGVVLNVLLAWPDCCFRSEIVKHP
RTRGTLAFVPAIFNEEQLMPKEQALLSLCIEEKAKGRKVLAYTVYSGTRD
TTCRLKKVLEQAGLKVAVLRASVDTSRREDWILDQVDRGIDVLITNPELV
KTGLDLLDFPTIVFLQTGYNVYTLQQAARRSWRIGQKHPVRVIFLGYAGS
SQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSVEMALARQLIAA
>PFL_1002 transcriptional regulator, LysR family
MDTLQNMRAFSCVAEAGSFTAAAVQLDTTTANVSRAVSNLEAHLQTRLLN
RTTRRIALTEAGKRYLLRCEQILAYVEEAEAEASDAHARPAGQLKVHTMT
GIGQHFVIDAIARYRKTHPDVTFDLTMANRVPDLLDEGYDVSIVLARELP
DSGFVSQRLGMTYSIVCASPAYVKANGCPQKPSDLLNHACLRLVSPVIPL
EKWTFDGPEGQEMVTINSSPFLVNSADAMKTAIISGMGVGVLPVYAAIEG
LRTGTLVRVMPKYRSQELNLYAIYPSRQYLDAKIKTWVEYLRGSLPEILT
AHQTELAAYELSGSLTGARLAT
>PFL_2324 transcriptional regulator, LysR family
MTVKQIRAFLAVAHSLSFALACERLHLSQSALSLTIKALEEGLGGRLFTR
NTRNVALTPEGEALLPLARRLIADWDNAEDELRQRFSLQRGRVTLAAMPS
FAGNLLPPILKHFRARYPQVNVTVNDVVNEQVLEMVRDREVELGVAFEPQ
DSTSLVFTPLYIDRFVAVVPRDSPLARRSEIDWQALLQEPFITLQRPSTV
RVMLEDHLRARGVQLPVEFESHQLATVGRMVASGLGVSAVPALCAQQMRE
LGGHCLTLHDPVVERAIGVLTKPGDELSTAAQALFDILREENLGQRLALL
>PFL_0777 transcriptional regulator, AraC family
MPSLGFTSVPPLLKYLLYAEQLGIATEPALAAAGLSAAQLNDTSLRLPME
VHERLLDYFCQHSGDPLFGLNSARFVKPSSWNVLGYITMNCATLGEAMGR
IMPFEKLVGDMGTSRAEVAGNQVRLIWSCRHQRPDIRRHLVENVLASWLL
YARWIADSQLSPSAVWFEHALPEPAEAAQYEALFGCPVLFQQPCSALVAP
LEYLQMPLRQADARLLKTLEEHAQAMMASLGDAPLALQVHNVLRQLLKDG
LPRKEQVAQHLHLSVRTLQRQLQQAGTSYQQILDDLRQELAEHYLRHSEL
SIQGISDCLGFTEPRSFHRSFKTRTGLTPGQFRLSAQSSGKA
>PFL_5092 transcriptional activator RfaH
MKSRTGPSTSGPTKYVTCLSADERLAGYNAQHEITLLITLKSELLSVARP
IAIMNMITQLPKWQACIETVDSMATYQPDSSTTWYLVQCKPRQDLRAEEN
LRRQGFHCYRPQRGCERVVQGRRQSGTESLFPGYLFIALEHDASWAPLRS
TRGVNRLVAFNGQPLAVPVSLIESLRQRVTDMDTSLPYKGTRVCITEGCF
ADLEAIFESSIGDERVVLLLTLLNQQRRIELPLSSIRKI
>PFL_2109 cold shock protein capa , fragment-related protein
MCPVGLSSTALLKIYVSWRYTMSNRQTGTVKWFNDEKGFGFITPQGGGDD
LFVHFKAIESDGFKSLKEGQTVSFVAEKGQKGMQAAQVRPE
>PFL_5747 transcriptional regulator, LysR family
MRFSLDQLQMFVQAAQSGSFSAAARKLGKTQSTVSVAIGNLEADLGVELF
DRSARSPVLTATGQKMLLQAEAVLERCLTLQANADCLSQVVEPHLSIVIE
TPYGPLMPALREFEQAFPYVDLLIRHPLSGDASELVARGEAVLGIAFSQP
GYPQELEFQQLGKLIMLHVCHPDHPLAQLDSVTFDDLHVHRRLAFSAHAN
KLPSSEYLRSTQLWQAENYLALLEMVRAGLGWATLPRQLIQRELAKGELV
ELQLGAYPHTDWLIGVDLLWARQRVMGKAERWLKERLLRQKVYEVDRRGQ
STTW
>PFL_0457 transcriptional regulator, LysR family
MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFER
TNRRVELSEAGRLFLEEARLVLAQVDKAADVARRAQLGELGELKIGFTSS
APFNSTIPQAIFAFRQRFPAVHLKLKEMSSTQVAEALVDQAIQVGIMRPL
PLPDSLSVVELLREPLVAVLSSKHPLASGSEEGLHLAELAHEPFVFFPRS
YGSGLYAQLLSLSRDAGFTPHFAQEAAEAMTIIGLVAAGLGVSVLPASYQ
RMRIDGVVYRRLLDPAAMSAVWLVQRKDQASPMAKAFVELLTRKTGATP
>PFL_4559 transcriptional regulator, LysR family
MASHEVLLAFVQAATQGSFSAAARKLGKSQSTISAAVASLEIDLDVQLFD
RSSRKPGLTPAGHVLLQRAEAILAATSRLEMAASQLSQGIEAKLTVALSD
TYQSDRFESSLSAFEQRYPDLELECLIAECEDLIALVQSGRAQIAFAEMQ
ADYPADLEHKTMEERSEISLYVACKHPLAQQARVDEESLRQHRELRLATV
LNPYDSRCQGRVWSAPSYLMLLEMAQGGFGWAPLPRWLVEGFGAGKLQEL
NVRGWPRTVAVDALWSRLHPPGPAGSWLLAQMLQ
>PFL_1544 transcriptional regulator, LysR family
MKAPRVTLDQWRTLQAVVDHGGFAQAAEALHRSQSSVSYTVARMQDQLGV
PLLRIDGRKAVLTEAGGVLLRRSRQLVKQASQLEDLAHHMEQGWEAEVRL
VVDAAYPNARLVRALTAFMPQSRGCRVRLREEVLSGVEEVLLEGVADLAI
SGFNIPGYLGTEMSSVEFVAVAHPEHALHRLQRELHFQDLESQLQVVIRD
SGRQQPRDVGWLGAEQRWTVGSLATAATFVGSGLGFAWLPRHLIERELRE
GLLKVLPLDQGGSRHPTFYLYSNKDKPLGPATQILVELLRTFDTAPLDAP
FAAPEQA
>PFL_5809 transcriptional regulator, LysR family
MDCPMRLRHIEIFQAIRQTGSISGAAQLLHVSQPAVTKVLQHAELQLGFP
LFLRVRGKLQPTPEALELEREVDKVSESLQGVRRLAQNLRRAPGHSLRIG
ATPALALALLPPAISEWTRLYPDSLCELSSAHSRELVQNLLMREIDLALT
LQPPDHPGLSAQPLAQGVLVAMAPLGFWPEHSRGQPLALQELADAPLIGL
SSADPLSARLDSYLKSVEPPPRVSIAVQTYSLARAMVESGAGLALIDPFT
ALGASTANTAIRPLSPPLPITLYAVTRAAEPPPHTLASLLEIFAHQAQAQ
LDRPL
>PFL_5523 conserved hypothetical protein TIGR00244
MSCQWDALPWPSLFLLPATMHCPFCGANDTKVIDSRLVAEGEQVRRRREC
LACGERFTTFETAELVMPRLIKTDGSRQPFDEEKLRAGMQRALEKRPVSV
ERLEAALVHIKHKLRATGEREVKSLVVGELVMTELQKLDEVAYIRFASVY
RRFQDLNEFREEIDRLAREPAKQ
>PFL_3723 transcriptional regulator, LysR family
MDIKQLKFLIALEQTRHFGQAAARCHITQPTLSMRLRNLEDELDLILVTR
GQRFEGFTEAGERVLAWAKTLLAAHDGLFAEAAACRGQLVGKLRLGLVPL
SGFNPISYVQQLSSSFPELQFSLSSMSSDRIIEDIGNNQLDLGVCYLDHV
NPNYLDFFEIGETRVGLLYDTRHFHFEGTEMSWEDAAELPLGMLSTGMHY
RKSIDLSFRSRGLNPQPILESDSTYQLFQAIHEGFCCSIMPLDSGLDSPI
ENLAFIQLPDASVLAPLGLVMRKTEPRSAIAEKCFAEAKKLFAIKE
>PFL_5113 transcriptional regulator, LysR family
MAAYNLRQLKYFITTVECGSVAEASRKLYIAQPSISTAIKGLEDSFGVQL
LIRHHALGVSLTPSGARFYRKAQELLRMAKEFEQNALADNDVVAGQIDIG
CFETVAPLYLPQLIAGFSALYPGVEIRIRDGEQQELVQGLTGGAFDLAIL
YEHDLDGTIETEPLMPPQRPYALLPAGHRYAKQPQVSLRDLCLEPMILLD
VQPSRTYFVSLFEELGLTPQIAFSSPSIEMVRGMVGQGFGFSILVTRPHS
PFSYDGKPVVCVDIVEDVTGSGLVAAWLKRGQLTKPARLFADYCKEHLAR
>PFL_0294 transcriptional regulator, LysR family
MDLKQLKFLIALDETRHFGQAAARCHITQPTLSMRLRSLEEELDLPLVKR
GQRFEGFTAPGERVLAWARTVLTAHDGLLAEAAACRGNLVGTLRVGVVPL
SSFNPQPLLQRLHAEHPNLRFELSSLSSEQILEQLASNRLDLGVSYLERL
DSENFDSLPLEPTHMGLLYDHRHFSFGEQPLSWEALIELPLGLLTSGMHF
RQSIDHNFHIRGLQPQPVLQTDAVHQLVQMVHGGLCCAVMPLDSGLETLT
EHLRLQPIADAQTLARLGLIMRRSAPRSALAQACFALYQQSFGDS
>PFL_4489 transcriptional regulator, LysR family
MLGSLADIDLRMLRVFCAIVDAGGFTAAQARLNTSLSRLSVVVRDLEERL
GYSLCRRGSSGFQLTDQGQELFEAAQLLFADIERFRQHANRLGPITREQL
QIGSVDSLISLPYAPLSLALGHLRRRLPQVRPNLHLMRPDELEQAVLDER
LHLAIGAFHHQLSGLHYQHLFEEEQNLYCANGHPLFPRTDETLTLEEICA
ADYVSRGYMAEHQRPHDLHFNQSVSAYAMEAIATLIFSGTYLGYLPSHYA
TAWVAKGQLRALLPERLAYRSHFHCITRQGQEPKVALATFLECLALAGRQ
LGEAHLQPLAAQGK
>PFL_0526 O-antigen polymerase family protein/toluene tolerance protein
MQPNALHNTANRVFDFICLWILPIGYLLLLCAMFFLPGRSGLHKLYYGLF
SIPTLIALCTRPSELKSLLREPVFIAMLLFCTWAIVSLAWSPPVDSVLGE
IKTPLHTLMLFAGCMLLVRYRGEVLQPLVFCAAIVALIASIFNLYVFVRY
HTPELRMIGAGAFDNPLLSSHVFGFFCVYWLCLSMNCRRYQILWLSVPAL
VIMVAALIATGSRTPLVALTLAALWLSFISWNRRSLMLLGGMLAGGIAVV
ALFSQMLLERGSSSRFDLWRLALEQIANHPWIGHGYNASLSLDPGIGFLL
QEPHNFALGVLYYVGIIGLLPWLFMQAWALFKSWQLRAEPLLILASTWLM
FGIGAGLTEGGGILSRPKEHWFLLWIPLALIAALCISQRARRSPSHTVES
LTQADADKLMANARVIEADGLGPKVLRLDDGSFLKLFRPRRWYTSGGFNP
YSERFVTNSEQLRELGITTPKILGLYRLADGSNAVRYQPLPGQTLRQSLQ
LASSGDERSKLIKRFGAFMANLHEQGVYFRSLHLANVLVLENGEFGLIDL
ADLRVYPSSLRKSLRQRNVRHMQRYAEDCGWLFLEHLDALQAGYAQGTSM
PLATGLLKQLPANDLHQVAR
>PFL_2272 transcriptional regulator, AraC family
MAAPRAAGYHGRPPTCRDLAMALAAPPDLSDPAIPVQPLARTYPRGLFIE
PHEHDWGQLLYAMSGVMWVETPHEALVVPPQRAVWLPPGVSHGIRVVSDL
QMRNIYLRPSLAATLDPSVQVLQVDNLLRELIVRLVELDPPQPEYYEALV
GLALLELRRAHRSQLKIALPDASDRRLGSLCQAVMAAPSLAISFEQHADA
AGASVRTLARLFKEQLGVGFAEWRRQVQLATAAAELIQGVPVSRIARELG
YSPSSFSDMFRRELGVAPSQYASANQV
>PFL_3673 transcriptional regulator, GntR family
MLKRPVRRKRQKLSDVIVESVKRSIVTDALRPGDRLPTEKELMESFQCSK
GSAREALKALEVEGLVNTRTGPNGGAYLNQAGTEPASRALRNYLHFQHMD
GEQVYQLRKVIEVELAVSVIGRLSEADFKALQDNIDFCSHPEDSEAGQRE
QRIAELEFHNLLGRACPNPLLSFMAQFLNDLLRDLVVLKKAYKPKRKQFD
AANLDYHKRLLLALRAEDERAVRQLMHEHMCDAEHHMTALEGEVTQHFLL
EFDHHR
>PFL_5704 RNA polymerase sigma-70 family protein
MSSVQSPHNELVGALYRDHRGWLLAWLRRNVACSQRAEDLSQDTFVRLLG
RDELKAPREPRAFLVAIAKGLLFDYFRRAALEQAYLSELMLIPEGEQPSP
EEQQMILEDLKAIDRLLGKLSSKARMAFLYNRLDGLSHAEIAERLGVSVP
RVRQYLAQGIRQCYIALYGEPL
>PFL_4991 transcriptional regulator, AraC family
MDEHQPGKVFRPDKDFVQFWRIPEGDCELLSARYSTQSFGRHSHDRYAVG
VISSGVEKLFYRGSYYLGSAGSVVTITPGEIHDGLPGHDQGWMYRMLYLD
PGWVNRVIFQGRFGAEHIHLFQNALNLDPSFALTFLQQHQIIENSPPSLE
RESILLDLVTQLFERSGAPIAAIASAERSAVKFIKKKLEDEYARHIPLEE
LAQLVDMDPLYLIRVFKKTVGVSPHSYQIQKRVAQVQNLLRTGASLAEAS
FSCGFFDQSHMTRAFKKVVGITPGSFRNSRA
>PFL_4262 transcriptional regulator, MarR family
MIKAANMTTERSPLDSCDQLLLDNQVCFALHSTSLMLTKVYKPLLQKLGL
TYPQYLAMLVLWERDGLTVGEISQRLLTDPGSLTPLLKRLEAEGLLSRTR
SREDERVVIVQLTEQGRVLREQARDIPQCILGASGRSVEQLRQLQEDLQV
LRGHLQDSL
>PFL_4363 transcriptional regulator, MarR family
MLDLKNQASQQAAMEAFFFGYQAFTAKADEMLERRGLSRVHQRIVFFIAR
YPGLSVKELLNLLGVSKQALNTPLRQLMEMHLVDSVAPDSDKRKRLLQLT
ADGTGFEQSLRREQVKLLQRAFSEAGESAVNGWLAVNQALAGKPVED
>PFL_1896 transcriptional regulator, LysR family
MELTQLKMVKAVARTGSIARAAEQLHCVPSNITNRLKQLEGELGTELFTR
VGRGLRISPAGEIFLGYSERILALVDEAKRAVDNQAEPSGLLRLGSIESC
AGGRLPPLLAQYHKRYPKVSVELVTGTWSQLFEELLHQRIDGALVAIDSL
PAKLQQTVLYHEPLVLISSGNSAPIRSASDLQHHNLFMWPPGCPYRRALE
NWLGRHGLNLPITGYASWGTIIGCVSVGAGVSLIPEGVLERYSQSANLSV
QRFDDLLPVDNRFVWHKDVQHHGARDAFAQLLREQLGA
>PFL_5019 transcriptional regulator, LysR family
MIGMRYPSMTALRALDAVARLGSVAEAANELNLTPSAISHQIKSLEQTLG
FALTERQGRSIRITYQGERYARDIHLLLANILEAGQRSDGQQVSGRLCIS
SPPGFATYWLCTHIAEFQALYPQVELQLVSPRTPGDTSDSSVDLFVAYGM
GDWPNQHVQKIVSLRYFPVCSPSLVNAMGGLKTLDGLDHALLLHMIDYSD
WRVWLAAAGAPNVDVRRGIVFADAHFVQSACIAGQGIAMGDNLISGEALA
RGQLVQPFGTEIESNRGYYLVADLLKSERPVVLAFSEWVKSQLQGITRLH
PEPRRNGKA
>PFL_4282 DNA-binding response regulator, LuxR family
MGNIIIVDDHPLIRLAIRSVLDPHHHNIVAEADNGADAVQLVRKHLPDLL
ILDLGIPNLDGFSVIAHIKSAGLHVKTLVLTSSDSKNFALRCLQAGAAGF
LCKTENLHELANAVKAILSGYSYFPEDTINILQQNTNAANQESVLISRLT
DREITVLKLLATGLNNQQIADALLISHKTVSTYKVRLLKRFNVSNLVALA
ELAKRNAVV
>PFL_3852 DNA-binding response regulator QseB, putative
MRLLLVEDDRALGQGIRVALSAEGYTLDWLQDGASALHALRTESFDLLLL
DLGLPRLDGLELLQQLRAAQQDLPVLILTARDGTAERIAGLDAGADDYLV
KPFDVEEFKARVRALLRRSQGRAQPLLEHAGIRLDPANQQVQYQDNEVVL
TPMEYQLLHQLMVRPGKVVTRERLSRALYGWQDRVESNTLEVLIHNLRKK
LCSELIRTVRGVGYVLALKP
>PFL_2435 transcriptional regulator, LysR family
MNWDDLRFFIAVANASNITDAGQALKVSASTVSRKILVLEQALSSVLFLK
TTQGYFLTEAGQALLPMALEIEERLRLMERQLSRPGARMAGVVRIECPEL
MGSHLIIPALAQFRLQHPQISFDFVNAARSVKLTQSHSDLLLRLQRPEAG
NFTLRRVGELTQALFCSPGYAAAHGCPEKPSELRQHSLIGWNQTLAHMPL
ARWLDQLSGDQPLWMRTGNLEAQLKAVQAGLGIAALPAYIAEPLGLHRVL
PQAPAHRADIWLLRNLATQGQERVERVAEFLCDLLARQGLQGEGKAG
>PFL_3482 transcriptional regulator, MarR family/acetyl transferase, GNAT family
MPSSSASLIPSLRQASRQMVRELGFMQATLAATDYPPSAVHALLEIGQGN
ALTAGDLVTLLGLEKSSVSRLVRKLVDAGEISEQAHDQDARSKKLQLSAR
GRQTLAGIDRFAQAQVAAALAHLSPAQQRSACAGIADYARALRAVRLGDV
PEPPERCSIARGYRPGVIGRIAEMHARYYADLAGFGQPFESLVARDMAEL
MGRLHNPRNEVWVALQGERIVGSIAIDGEGEGGEALLRCFILDEAARGQG
LGRRLLAEALGFCDQWGFAATRLWTFKGLDAARALYEEQGFVLVQEQEGE
QWGAPVTEQCFVRARVAQRDTIR
>PFL_4583 CDA peptide synthetase I
MKTDIPGDKNSQLSRRRLPPLSALRCFEAAARLESFTQAGATLHLTHGAI
SRAVRALEEDLGTPLFERRSQRVFLTAAGAELLHSVTQALDLIESTASRL
RAPAPAAPLVLSCEPTLLMRWLIPRMPGFYAEHPQVPIQLLAGGGPFSFG
AGIDLAIRRNDFAWSRDTQAHWLFDEAIGPVCRPERQADWTPATAGLAQL
AAQAPRLHSATRPHAWQQWLQLQQQPVAPTPPEQVFEHFYFSLQAAVAGL
GLAIAPWQLVRDDLEGGLLCAPFGFVADGSAYYLLSPQAIDSDSASGKLL
HWLRRQALA
>PFL_4535 transcriptional regulator, LysR family
MIIAPAHYQLDYPDLSLILALVRGGSLARAAALLKVDVSTVFRAVRRLEA
GLGQQLFDKSRAGYLPTSLAQALAQQAEHAEQALEAARIGVARGGEVVSG
TVRLTCTDSVLQGLLLPALAQFMANYPALVIELCTSNDFANLNRRDADIA
VRLTARPPEHLVGRCLGAVSYRVCASPAYRQRVDCTDLSRLAWIAPDDFL
PDHPTVVWRRQQWPGVQPSYRCNSMLSVTELVRAGLGVAALPDFLVGSAG
LEALSEPLGQETALWLLTRPDCRALRSVVTLFDELARHLRWP
>PFL_5204 transcriptional regulator, LysR family
MDLNALRLLVRVAETRSFTRAAGDLGLTQSGLSRAISRLEQQLGVRLLQR
NTRSVSLTPDGQVLVERAAPLLAELAHAEHLLLDRRESPSGMLKISTPSL
FGRKVVMPVIGELTAQHPGLSIEAVMTDRVVDIIDEGFDAVVRTGVIQDQ
RLIARPLAPLRWVTVAAPGYLERHGTPRHLADLQQHNCLAVRNLRSGRLV
DWQFMDQGKPLDLAVQGRLIFDIGDALVDAVLGGFGIAQLMEFAVREALD
TGRLVPVLQEHAGRSRELSLVYPPSRQCSPKLTAFAEALAQASW
>PFL_0885 DNA-binding response regulator, Fis family
MSEEIQVEGEELPHLLLVDDDATFTRVMARAMSRRGFRVSTAGSAEEGLV
IAQQDLPDYAALDLKMDGDSGLVLLPKLLELDPEMRVLILTGYSSIATAV
EAIKRGACNYLCKPADADDVLAALLSEHADLDTLVPENPMSVDRLQWEHI
QRVLTEHEGNISATARALGMHRRTLQRKLQKRPVRR
>PFL_1952 helicase/SNF2 family domain protein
MERGRRYALEKRVRIATAGDSAITASCEGSGGTMYRQTITLRESSKGNLL
LIDAHCTCPVRSNCKHIAAVLLQVEETLAYPAAAQDAELLEKLSAVLDSR
RPAAPPQVLLEDVHPVPRLWLASIEFSAFEPRNGKMQRYIQHRAALSFNY
RGEYASGQKNTDVIIRQEHQSLRIKRQPELEQGWREQLRGLGFKIATRQS
KALPESAGELFEMVNDSAWLTFTLNELPKLRSQGWELQIDEGFGFDLTAV
DDWYASVDEAPGRDWFDLELGIIVNGERLSLLPILLNLMRSHTEILNPER
LAKRRDDELILVNIPNRPNSLHGPLQVALPYGRLKPVLATLGEFYLQEPG
DTTLRLSSADATRLNPLQDLPLLWEGGEHIRTFAQRLRDIRDYSAPAPQG
LNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNA
GRLDRPCMVVMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFAQLGDH
DLLLTTYALLPKDIELLAAQPLHVLILDEAQYIKNPSSKAAQAARELNAR
QRLCLSGTPLENHLGELWSLFHFLLPGWLGDAKSFNRDYRVPIEKHASEV
RLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVELNEAQRDVYETMRL
AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDSPPTRGSSS
GKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEAELKRRNIAYALLTGQ
TRDRRTPVRDFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATE
SQATDRAYRIGQEKPVFVYKLIARGTVEEKIQHLQQEKSDLAAGVLDGRK
AGDWKLQSDDIEALFAPLPDNKGGR
>PFL_3933 transcriptional regulator, MerR family
MSSQTYSISDLARELDITTRAIRFYEEQGLLAPERRGQERIYSPRDKVSL
KLILRGKRIGFSLAECRELIELYDPSSGNLKQLHSMLAKIAERREQLEQQ
LLDIEQMKLELDTAEERCTQALEQTILNQKSTAR
>PFL_3976 transcriptional regulator, MarR family
MSSKEPDVWFRFVRAHRTVIREIERRLAQAGLPAYAWYDALWGLESGAEG
TRRMHELADVLAIERYNLTRLVDRLEKDGLVQRSRCEGDGRAAFVSITDE
GRKLRKKMWKIYEATVAELFLSQLDSEQKHAFADALERTATLARAAANGG
DTGSKS
>PFL_3554 transcriptional regulator, TetR family
MKATSNNVEAAGRGSLESWLNAAYESLKESGVDAVRVMPLAKKLNLSRTS
FYWYFQDREALLEALVNLWKNKNTLSLVSQSEAYAESITEAILNVFDCWL
NSELFDSQFEFAMRSWALQSPEVAHEIRQADAQRVQALAQMFDRFGFAHD
AAVTRARSIYLTQIGYISMNTQEPMAQRMRYIPEYLKIFTGVEPLPRELD
RFFQRNGFSAAEL
>PFL_5013 acetyltransferase, GNAT family family
MYPPGRPRSSRHAAATTMPTGPKHSTTWVGPEHSRGEICPYLPIGEFTML
IRDAHAAESEALRQFLGDNGWGHRVGSSEYFAQLLANSQRTAVALLQGQI
VGFARGISDGLSNGYLSMVVVAEQHQRRGIGRALVHWVMGDNPEITWVLR
AGRPGAAEFFSSLGFEPSIITLERTRHRA
>PFL_0209 transcriptional regulator, LysR family
MDLRQLRYFIALNEHRSFVRAADAMGITQPAFSRSIQGLEQEFGCVLVDR
GNKDLRPTPEGQVVLQHALSLVQGAALLSSEVTQMTKLDAGEVRFGCGPA
PAVKLVPDAVAQFTSAHPKVRTCFAVDNWEKLSRSLNREEIEFFIADIRH
FEADPNYQTQPLTPKRGVFFCRPGHPLLAKESLSTNDMFDYPLATTLIPP
GIRKLLANLSGRIDFSPTIETEHFPALVKIVRQSNAIGVGTAEAFAEDIA
QGSLALLHWRNLPQNIDSLNARCGIVSRSGFRLSPAARKMIEVLVAVDQQ
THSIAV
>PFL_4450 DNA-binding response regulator
MTPVSVEPPRILTIEDDPVLGAYVREQLEHCGFAVTWCQNGPEGLGIARR
RPFDVVLLDILLPGMDGLEVLTHFRQSHSTPVLLMSALGAEADRISGFRL
GADDYLPKPFSMAELRVRIEAILRRVALDRRPMPPVPVSLAQSLRFDDER
SDVFFAEQWAGLTRSEYRLLDTLHRNGDEVLSKAFLYQHVLQRGYAAHDR
SLDMHVSQIRRKLKALGYSERELRTVWGKGYVLSALDELV
>PFL_3529 transcriptional regulator, AraC family
MNRPPLFVRAPALTGFTRLVSEHGGDAQALLARVGMTQAQLDDAHFSLPL
EKVAQLLEITSQALSLADFGARLANLQDVSILGPLALIVLHASHLADALE
RVARYMPYHSPGLNLRLSVEGQYAAWHLQHDLSVSRLGDRQLSELVHGIA
LAFLRRVTHHTGKQWQINFRHDSPLDAKAYRALYGCRVRINQAENALLFP
ASLLSTPLASASPAMLETTERIVRRLIQSHPLDLGRQVEILVERLLVTGN
CTLPVLAGQLGMPRHMLQRRLLAQGLRVEEIIDDLRRKRLESLLPHPQIA
LTEVAFLLGYGDPSSLTRACYRWFGQSPSACRQRHLAQP
>PFL_6213 transcriptional regulator, DeoR family
MSKRNTPQRRHNILALLNEQGEVSVDELAKRFETSEVTIRKDLAALESNG
LLLRRYGGAITMPQELVSDIGQPVSLYKQAIARAAVQRIREHARIIIDSG
STTAAMIPELGLQPGLVVMTNSLNVANALSELEHEPVLLMTGGTWDPHSE
SFQGQVAEQVLRSYDFDQLFIGADGIDLARGTTTFNELLGLSRVMAEVAR
EVVVMVESDKIGRKIPNLELPWSSVHTLITDDRLPLEVRDQIQARGITLI
CAAVS
>PFL_3684 transcriptional regulator, LysR family
MGPAAMQLRALRYFHEVARCASLRQAAERLYVTPTAVSRQIEQLEHFFGT
ALIERGPRGIRLTVEGECLAEQVTYTLRGFDQVRDVIASRQSQVAGNVSI
HVSESIVSSVLAPVLAAFNRAHPKVTFNIVIASAGATLDALCSGEADLGL
AFYLPERAEVEVTAHCQLWHRVLVSAEHPFAQCPSIRLQDLEGQPLAIPD
SAYGVRQALEGAAKKRGVNILPVFTTSSLEVQKSLARQRAAVLILPQVDA
EARDLGDGLVAVPIDDQYLERIRVDLCVVRNRPLSVATLRCQEMLVRAMQ
RHSLA
>PFL_3927 acetyltransferase, GNAT family
MPDSSNVIADIHQLDSGYSREARSLLYQAYRHEPTFGFIFEADRPGYEQR
VRATVRELVKQHFLQDLPAIGLLVNDRLIGIALIAPPQRRLGITESWAWR
LRMVLSTGFRCTQRYLEYHQAVQACLPNDAVHVLPLLGVHPQFQGQHFGE
QLLAAVHNWCAVDEHSQGVVLDTGNPRYLEFYKRQGYEEIGEIAVGPVRE
HVFFHPNPQHLQRATA
>PFL_4022 conserved hypothetical protein
MDKNSFQVTLEQQFASLTPTGKRIATYLLANLQQLPFETADSIAQQAGTT
GISVGRFLRSLGYRNLDDVKQGLRGDAPASWLITDRLGAFRSEAHQDDAL
ERSMHREIEAIQHVYGLARSQPFAAIVQQIVEADAVFIIGIQSTRGILNA
FHSHLEYIRPKVYYVDGLSGIYAETLNSGFAKPYAIISDFRAYSSITQTF
CEVANANALPLALVTDLQCPWARDYPLDLLQLKTDVGQFWDSLAPLTCLF
NLMVSAVAEGYGERLDQRLAKNRQLQEAFGQFES
>PFL_2378 transcriptional regulator, AraC family
MKKNSICMANRRTVAACTVATSDCPPMTQPRTPTALAALIARHTPHSGDF
PSAVPNLTLHRRSTPTSAIPCIYSLGLGVIAQGGKQVLLQEAVINYRAGQ
GMLTSIDQPVVARVTQGSAAEPFLGMMLTLDMHQILQTAAQMQPPPPSRA
SDYRTVVVDELEPGLASALERLVGLLDEPALIPQLAPLIQQEIIVRLLAG
PYSLALQQLLAVGSPTQQIFKTVAWLKQNFTQPLRVDDLAQRAHMSPSTF
RQHFRAIIGVSPLQFHKQLRLQEARQLMLSQNIDAGRAAGLVGYESASQF
SREYSRVFGAPPQRDIRRMREAG
>PFL_2646 transcriptional regulator, LysR family
MHFDLADLRLFIHIAESPSLTQGARRAFLSPAAASARIKALEGQLETRLL
YRDSRGVEVTPAGERLLQHARLIMRQVDYLKSEFTQYGGDSSGHIRIFAN
TTAVTEFLPEVLAKFLSVRPGVTVDLQERLSRDIVRGVLDGTSDMGIIAG
PVEASGLQVLHFSTDHLVLMVPVGHPLSGQASVTLEQTLAYQHIGLHEGS
TLLTFLREHVERLGKQLSLRIQVSSFEAICRMVEAGVGIGIIPESAALRH
SRTMQLVTVKLDESWAVRERSIIVRELEALPGSVRALIATLMPASQEPSI
AGNPG
>PFL_3737 transcriptional regulator, AsnC family
MLDAIDQTLISALMQDSRRSLKALAQISGLSAPSVSERLRRLEERGVISA
YTLEIDPRFLGYQLQAIVRIRPLPGKLQEVERQILAIAEFTECDKVTGDD
CFIARLQVRSMEQLDSLLDHLNHYAETNTAIVKKSPIKRRLPPLE
>PFL_3291 transcriptional regulator, LysR family
MRLRHIEVIQALLQTAHLGTAAELLQLSVAEVEALLRDAESQLGFMLFAS
VRGRLQATREARELQGAITRVYDAFEPVQRLADSLRFHQAPPLRLVGTPP
LVQQLLPQCIAALRRRFADTPCSLLGQSTRDMVHSLLLRDCDLGLSLHDP
QHPDIHSQALAQGKLFLLAPHGWLQPKQKYVALQDLAGQAMVGLEGQDPL
SVMLASKLQNLRPSPVIQTRVQTYQMMRSLVEAGEGLAIVDPFTAVGARS
AGLDVCPLSPPISVTLYALRRHGSDSSPLTTALLELLTEQAEALLAG
>PFL_5119 transcriptional regulator, AraC family
MAIHRISDNKVIGPDMLIDHFHHGPVSAYPRDYPDAAHQPLHRHREAQFL
YAACGTMRLVTAQGAWVIPPSRAVWIPPLVEHEIFMVGEVRMRSLFIDPE
LSAPALRQCCVLAVTPLLRELILRAVQGPEQAENPLIQQLMLEEIAALEN
LPLHIPMPQDRRLQAICRTLIQTPDHPHTLEDWAQQVGASSRTLARLFQQ
QVQMNFNAWRQQVRLMEALPRLLAGESVHNVADSLGYGSARAFSAMFCRL
LGDTPRHYVAALNQLSAINASR
>PFL_4421 transcriptional regulator, MarR family
MLPSQCLCTNLRRAARGVSRYYDGALDGFGINVAQYSLLNNLLRLDQPSI
SSLAEAMGLDRSTLGRNVRVLEAAGLVCLQEGDDQRNRLVLLTEAGHERL
VAALPAWEAAQQRLIDRLGVEKRETLLALLNELS
>PFL_0619 transcriptional regulator, AraC family
MSKKHIDLLDFHGLPAPVYFRYADFAAHSHALEHRHPWGCLEYSAHGVMH
MEIAGQRFMSPPQYAVWVPPQTPHSFYTAQPINYRAVLLAPELCAELPAG
GSTLAISEILKAILKDFAARDVQIPEGEADQRLAQVLLDQLRQAPVHTCY
LPYASSPDLLRVLQALQAEPGNNQPLAHWAGLAHVSERTLARQFVRELGM
SFGEWRQRQRFLASIEALESSRSIQEIAFDMGYSSASAFIAMFQRQAGST
PEQYRRAGLQNR
>PFL_3943 conserved hypothetical protein
MVKRTSLQDAECPVARSLDAIGDWWSLLIVRDAFDGIRRFGEFQRNLGMA
KNILATRLRTLVEHGVFEVVPASDGSAYQEYVLTEKGRGLFPLIIGLRQW
GEAFFYQEGEAHSRMVDRQTGQPLRALELRSADGRLLGPEDCRRVPVGEG
D
>PFL_2828 transcriptional regulator, LysR family
MSFLEPAPLQGFAPYTAPQEPREAWLALAAGIEPAVAQYFLVSARCGCFM
QAARSLNIKATLLRKQLAQLEEHLRRSLFCYQGNALSLSREGLQLQAQLI
ALAHQRRLPVIEQPLIRVAVAETILHDILGRDLIALLRRNASARLEIISI
DSDLSLQALSADLVLWLAAEDSPLPGPSFATREPMPLARIDYLPHIAKRY
SRVAARPDSLDDLADYMLVQWQHDRHIEPFRPWNSLVEQRLAGVVQVHSY
ELMLEMIRCSACIGLLPQYMSRFDRGLTALPGLFEESMQRRAWLAVNAQV
EHEEQVQQLVELILNTFSERQDWFV
>PFL_2118 transcriptional regulator, MerR family
MLEPSHNDELPVIPGKRYFTIGEVSELCAVKPHVLRYWEQEFPQLNPVKR
RGNRRYYQRQDVLMIRQIRALLYDQGFTIGGARLRLSGDEAKDDTTQYKQ
LIRQMISELEDVLVVLKK
>PFL_5191 acetyltransferase, GNAT family
MNLESALLPTSLSDLETLVQMRIAAMRESLERLGRFDPQRARERFAASFA
AERCHFILSDGQPAGFIQSQSHGDHLRLQHLYVLPQFQGRGLGAKALEQL
LERSANEQLPIHLDALRGSDSNRFYRRLGFVQVGESEWDIHYVRPADPPR
A
>PFL_2422 hypothetical protein
MIPGGFRPSGSDEESWLGQVFLFREDEELPRNSAGETLLPFAQLYLPALP
FHSPLLEGVQVLTVFVANPFPEPLEPMGERWLIREYRAEDVLVRKDLTAP
GAFLKPFPLKPEAVPADFPLWDGGGVPEDLEREILELENSGQIECYYDLV
NHCYQHKLGGYPSFCQSGIDVGDGFEFVMQISSDAKIGLNVVHGGSLMFW
KHPASGEWALYYDFH
>PFL_3932 transcriptional regulator, LysR family
MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFND
PLFVRTAQGMVPTPMAQNIIGPVRNALSLLRVSVQESRIFNPLQAVKTYR
ISMTDLTEAVILPPLFQRLRRLAPAVIIESFLSKRRETTKELAAGRLDFA
VDAPLNTDPQVRHVKLMEDRYVCAMRKGHPLAGKEKFSLDDYLSLTHIHI
SSRRSGLGHVDLALGKMGIQRKIALRSQHYLMASQVLQQTDMVMTVPERF
ARRHELHAFNLPVNDVPPVETHLYWHESTDQDPANRWMREQMIELCQQVT
AYEKKLDQQTA
>PFL_2829 acetyltransferase, GNAT family
MPAKGPASPAPVPETPSLASQLLPGAPTAIPCRSRLAGEGARKPCAGSGN
AFAGKPAPTRGTHRYFMQEPACRRRGPPALRRFRKRLRWQASSYQGPPPL
FHVGAGLPAKGPANPAPVPETPSLASQLLRVCLRGGTLPANEHQSPRHPE
AHARTLDGHFDFKDDLAMPNAHPTIVIERCNEAHIDGLTALYSEPSVAAQ
TLQLPYQSRELWRKRVGLGQENEGLVALVALHQGAVIGSCSLLQVARVRR
AHCADIGMGVSPAWQRQGIGSRLLAAVLEVADNWMNLRRVELTVYADNQA
AIGLYRKFGFETEGQLRDYAVRDGGYVDVLSMARLRR
>PFL_6028 transcriptional regulator, LysR family
MSRRLPPLYALRAFEAAARHSSFTRAAEELSITQSAVSRHIRTLEDHFAC
RLFQRSGRNLQLTEAARLLLPGIREGFGALERACNTLRAEDDILRMKAPS
TLTMRWLLARLSRFRHLQPGNEVQLTSAWMDVDSVDFNQEPFDCAVLLSN
GHFPPDWEASYLFPELLIPVGAPNLLNDQPWDVARLAATELLHPTPDRRD
WRSWLEHMGLTDQVSLKGGQVFDTLELGMIAAARGYGVSMGDLLMVAEDV
AQGRLSLPWPTAVASGLNYYLVWPRTRPGGERLRRLSDFLQGEVQAMQLP
AVERLG
>PFL_0218 transcription regulator, Cro/CI family-related protein
MTIIVRLDVVMAKNKIRSKELAAILGITEANLSLLKNGKVKGMKIETLDK
LCAALDCQPGDLLEYQATEPA
>PFL_4043 DNA-binding protein
MNDKTNDPTSLSPIGLLAMAIKRERLNAGFSVSELAKRAAVAKSTLSQLE
AGLGNPSIETLWALAQAMGLQVTRFFQQPAHQLKVIRAHEGTTAHAEDAH
YAATLLDDCPPGAQRDLYRLKAQPGQARQSKAHLPGTVEHLVICSGRALA
GPADSPVSLEAGDYIRYSADLPHVFEALEADTTAILVIEHR
>PFL_3292 acetyltransferase, GNAT family
MQPVVNPRYPGLAVRVADEGFAAYIWGSDFSFEVSAYAVAEREVPVADWV
LRRIVPYRKCYGIDPEEFSSYRNAADSEIFMAYLDDQPVGHVVVSTNWNG
YAHIDELAVHAPARRHGVARALLDVAQFWSRRKKLPGMMLETQNNNLGAC
RLYEQCGYVVGGVDHLRYRGIDPQTAEVAIFWYRLFANELEGPAL
>PFL_2515 transcriptional regulator, ArsR family
MNVVQNDVGVSQVAAAIAEPARTRMLCALMDGHARTSTELAAIAEVSTST
ASAHLAKLKEAGLLRVQVQGRHRYYCLGDPLVAQALEALMVIGQGRAPSF
TPRTPDRLQFARTCYDHLAGTLGVQLHDRMFEAGWLLAAEEGEAYRVSDS
GEEFFRSLGIEVAGLKALRRRFACPCLDWSMRRPHLGGALGAALLQALLE
RKWLIRDLDSRALSLTGTGGRYISKRFGMALIQPARPLSSSAVIELQRLG
G
>PFL_3964 transcriptional regulator, LysR family
MNLFQLRAFDAVAREGSFTRAAGRLFISQPAVTGHIKALEEHYQITLLRR
TARRVELTEEGIKLAAITRAMFGLAEEAQAMLEANRQLLTGRLEVAADGP
HLVMPMLASLRARYPGVTVNLRLGNAQETLAALLSEHADVAVLTEVEPRK
GLHLQSLGESRICALVPDGHPWLELAEGVAIEQLDQVIMVLREPGSITRR
TFDEACGLAQVQPRVLLELDSREAVTEAVAAHLGVGIVSSVEVGHDPRVR
TVPIRGAGLVNRHMIGCVERRRDLRLIQAFFALAPA
>PFL_4158 sigma-54 dependent transcriptional regulator
MQLLTLPPSPALATSIRATAQVFEDPKSQALLAHLQQVAPSEASVLIIGE
TGTGKELVARHIHNLSARRNRPFVAVNCGAFSESLVEAELFGHEKGAFTG
ALSAKAGWFEEADGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGSRKS
IPIDVRVLAATNVQLEKAINAGHFREDLYYRLDVVSLELSPLRERPGDIL
PLTRHFIEAYSQRLGYGSISISPEAEHKLKSYSWPGNIRELENVIHHTLL
ICRNGVIQRDDLRLSNMRIERADDSHPSHDDSAEALLERAFEKLFAEQAG
ALHEKVEDALLRAAYRFSHYNQVHTANLLGLSRNVTRTRLIKIGELAVNK
RRPIDAPNERTLQLSI
>PFL_4238 DNA-binding response regulator, LuxR family
MGSVLIIDDHPVVRMAIRILLEHEGYSIVGETDNGVDALQMVRDCEPDLV
ILDICIPKLDGLELLERLGNMPRRSRILVLTAQSAALFANRCMRAGACGY
VCKQEDMSELLSAIKAICSGYNYFPSLALQVNRNTLGSPLELAQFNSLND
RELMVLQLFAMGQTNKEIAAGMFLSNKTVSTYKKRIMQKLATTSMSELVD
MAKRNALI
>PFL_1584 transcriptional regulator, AraC family
MGSILTLRHYTHDLIAHSHEHAQLVFGLRGQLDFEVEGQGSQVQQQSFVV
VPAGARHVCGSPSGSHCLVLDIPGEHWVQQSLGEHAEASRRLLDAPRHQV
LGPSQSRLVNWLADSPVDDPLIAQQGAVLLLASLNHRADSQPRERRLPYA
ALNAHIDHHAAHPLQVADLARIAGLSAARLHARFIAECGASPMEYVRRRR
LHMALDLLRGSTLPMGEIASRVGYSSQSAFAAAILRQYGHSPRQLRQGAD
ASPSTKNARIATDQQAAPPVD
>PFL_1107 DNA-binding response regulator, LuxR family
MKATTNNKLRIILADDHPIFLIGLRAVLEQDDSLAIVGEASSPSALAQLM
QEIECDVLVTDFMMPAEQQNDGLRLIEQLRRRHPDLPIVVVTMLNHPGLF
RSILDLGVTGLLSKASLADELPTAIARARQHKPYIAQAIKQALSLAGEVG
PDRLVSSDQLSPRELEVIRLLAAGHAVGEIAAQLNRSKQTVSAQKVSAMR
KLGLSSEAALYIYVQEHGLS
>PFL_3198 conserved hypothetical protein
MSYRIAVRALCEFSAKAGDLDLRFTPSPTALEGIAGHRTVASRRNPGYQS
EVALEGQYAELLVKGRADGYDPAQNLLEEIKTYRGDLERMPDNHRQLHWA
QAKVYGWLLCQSLQLPSIRVSLVYFDVLSEGETALVQEHSAEALEEFFNR
QCALFLHWAQQQMHHRATRDQATRDLRFPHAEFRRGQRALAESVYKAVST
GRCLLAQAPTGIGKTLGTIFPMLKAMAAQQLDTLLFLTAKTPGRQLALDA
ARVLFSGVPGLALRVLELVARDKACEHLDKACHGESCPLAKGFYDRLPAA
RQAASQVPLLDRQALREVALEHQVCPYYLSQEMARWSDLVVADYNYYFDF
SALLFGLAQANQWQVAVLVDEAHNLVERGRGMYSASLDQQQLASVRSSAP
QALKSPLQRLNREWNALHKEQVAEYQAYAQLPAALLKALALCVAALGDYF
NEQPRGLDSGLQGLYFELLQFARVAELFDEQQFIFDISKRALGAKRSLSR
LSLRNVVPAALLGPRLAAARSTVLFSATLNPRGYYADLLGLPDNTVWLDV
ESPFDAGQLEVQIVSRISTRYAHRQASLAPIVELMARQFAARPGNYLAFF
SSFDYLQQVAGLLAREHPDIVLWCQSRGMDEASRQDFLQQFRPEGQGIGF
AVLGGAFGEGIDLPGSKLIGAFVATLGLPQLNPLNEQMKQRMAALFGSGY
DYTYLYPGLQKVVQAAGRVIRGQSDRGVLVLIDDRFAEPRVRQLLPSWWA
LDAPPAGG
>PFL_0732 transcriptional regulator, LysR family
MSSRRADPLAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQM
SDLEQRVGLRLCQRGRAGFSLTEEGREVYQSTLQLLSALESFRTEVNGLH
RHLRGELIIGLTDNLVTLPHMRITHALAQLKERGPDVQIQIRMIAPNEVE
QGVLDGRLHVGVVPQASALPGLEYQPLYDERSLLYCAVGHPLFYVDDRQL
DDQRLNDQDAIAPTFRLPAEIQAHYQALNCTASASDREGMAFLILTGRYI
GYLPDHYASLWVQQGRLRALKPKSRFYDLSLASVTRKGRRPHLVLESFLE
SLAATR
>PFL_2212 DNA-binding response regulator, LuxR family
MNILLVDDHAVVRQGYASLLRAVLPAMQVREAASGEEALARVAEEVPQLV
IMDFGLPGISGLETTRRLRQRLPQLRVLFFSMHDELPLVRQALEAGASGY
LTKNSAPQVLIEAVHRVLAGHAYIEQPLATQLACTPAQNASDPRLQSMTQ
RELEIFVMLAKGTPARVIAEQLCISAKTVSNHLTLLKSKLQVSSHAELVH
LGIDMGVVRVAG
>PFL_5468 sigma-54 dependent transcriptional regulator
MHTSNYLSRHAQQVLTVAQGKAHLQGPGSDPSIARSWLRCLEDYHLDPAQ
VMAPTVLEHGRLLESRERLQDVLQIAGTEMANLHQQLSGAGHAVLLTDAR
GVILNCITAPSERKIFEHAGLWLGADWSEAREGTNGIGTCLVERQPLTIH
QGEHFRGRHTGLTCSASPVFDPHGELLAVLDVSSARQDVSRQSQFHTMAL
VNLSAKMIESCYFLRYFENQWLLRFHLQAESVGLFSEGLLAFDGDGRICA
VNQSALNLLGHIRGGLLGKPVESFFDCSLDELLGRASINASASWPLRTRD
GRRLFALLRGQPQPAAQPAVLRAPQAIAPARPSGICLGDDGLQNDFRRAS
RVFERDVPLLINGETGSGKEAFAKAVHQGSARAGKAFVALNCAAIPESLI
ESELFGYRGGSFTGARKEGMRGKLQQADGGTLFLDEIGDMPLALQTRLLR
VLEDRLVVPIGGEPQPVNVRIISATHRDLLERVRDGSFREDLYYRLNGLE
IALPALRDRSDKSQLLDFLLAEEAGGQPVMLEDAVRQSLLSYSWPGNVRQ
LRNVLRTLAALCENGRIGLDDLPPLIRHSRPAPLGEAEAEVPERPLEDAE
RVALLAALEQQRWHMTHTAEQLGVSRNTLYRKLRKHGIAR
>PFL_4244 transcriptional regulator, MarR family
MNDLSVDSLKLDSQLCFKLYAASRAVVRGYKPMLDRLGLTYPQYLVMLVL
WEWQATPPSLPTVKALGERLALDSGTLTPLLKRLEQLQLVQRQRSGRDER
EVHLSLSERGLALREQVPPLKAALLCDSGIDLDNLDQLREGLDQLLQQIK
ALS
>PFL_2177 transcriptional regulator, LysR family
MDYRYFLAVIDAGSLAAAGERLHIAPSAVSRQIALLEESVGVALFERRPR
GMQLTAAGEALAEHARRTWLEQENILAELRGEGYPGAKVIRLVSTEGLSR
YFLPRVLLEHYRLRPGAEYRLDVISPHECVQRIRRGEADVGLTFSTEPVE
GVNVCYSIRSPIRALMRAGHPLASAGVLSLEQVQAFPVALTPKGTTQRQL
LDLVCQMDGLSFDQVMTCNFSGALHEFVRQSDTVAFASAISGEGQGMDGL
VSVPLSNPRLGDRDIQVLTMPKRVLPESLAFFIDTLIARLQKEG
>PFL_1511 transcriptional regulator, LysR family
MNLKFLETFVWVARLKSFSHTAEKLFTTQAAISSRIAVLEGELGVKLFLR
DSRGVSLTPEGVKVLEHAEQMLDTLQVLKQSIQAPSSKVGRVRIGVMDTV
IHTWLSPLVAEMMDHYPQVEIELVADTSLNLCDQLQKGFLDLVLQTDLLR
QESIRSLELASYPMGWIAASNSIYNRDYANVAELARERIVTYSKNSLPHQ
QVLSLMQANGVLAPRLNCVNSVSAITRLLRDGFGIGALPPVLVREELARG
ELTLLAIEQRPPNLQVVVSWRVGVELVEDIVELCQRVVQRYGQKVGADYL
VLSEPQ
>PFL_3497 regulatory protein Pchr, putative
MLSPNAAPQPVKRDSTLHFPNPQHTGSAAVVPEVTLSTGTVLMDSQMWMQ
EPLWEGLKIILVLSGQLNCRVEGQPEVEIRGPTLCAVANQGEHCGDHLFA
SGVPVRYTTVQLDFPSIRNVGLEPERLLDQRGGGPMLFCQPASKPLLALA
QQIFTCPLQGPTRSFYLGGKALELTALGVEGILAQAESRPLQDSPCSSAD
IERIHAARDLLLNSLQDSPSLSELSRQVGLNPRKLTAGFRQVFGTSVYAY
LQEQRLGEAYRLLASGETNVSSAAYRVGYSPAHFSTAFRKRFGVSPKSLR
>PFL_4135 sigma-54 dependent transcriptional regulator
MTLIKTIKGEQQHEARLARERLHLEGQIPDGVLRAEIDASWRRSLSHGVH
FGSQHQLTLESSASLEVLLASNRLLLDAAIPAIDYLSQHQGKDGMIILAN
ADATILAIEGRADRLKDSGVQDITLGACWSEATRGTNALGTALVEARPTL
IDCGEHYLDRLSHFSCTSVPIQCPQGEILGVLDLTREGPLGRAQDSTALL
AMAVSQIEARVFHATYPEQIVLAFHSRRQYLESPWQGLLALSLGGQILAV
SGQACQLLNTPRAALVGRRCEEFLGGDGLQLLARLQQGAVGSLQTAKGEL
FYKALRAPQPALNLHRAPRSAPKAAAMPQDLEALAGGNSRYARTLRMARQ
GLANDLPVLLLGETGTGKEVLARALHRAGSRAEKPFVAVNCAAIPEGLIE
SELFGYREGAFTGSRRGGMIGRLQQAHGGTLFLDEIGDMPLALQARLLRV
LQDRKVAPLGAGEEQDIDIALICATHRDLKQQVQDKAFREDLFYRVNGIS
VLLPALREREDLQPLVDSLLAKLGGAQVSLSDELRRLLADYHWPGNIRQL
EMVLRTALALREDGECHIGLEHLPDSMLDDLNASARPQTGSIRENELELI
RSALDNHQGNVSAAADALGISRATLYRKLKQLRA
>PFL_4080 RNA polymerase sigma-70 factor, ECF subfamily
MAGLAQGQNRPSGRSGALLENYYRELMCFLNAKLGNRQVAEDVVHDAYVR
VLERSSDTPIEQPRAFLYRTALNLVIDGHRRNALRQSEPLEVLDNEERYF
NPSPQTSLDHGQRLEMLQRALAELPRLCRESFLLRKLEGLSHPQIAEQLG
ISRSLVEKHIVNAMKHCRSRLRQWDAQ
>PFL_3422 acetyltransferase, GNAT family family
MQSRLLPSSATGLAPREITLDDAALLQRFFVENPEYFHIVHGAAPQPDEA
RDEIDDALPAGWSYTHKWKIGYFDSEGRLLAFVSIVTDLLAQGVWHIGLF
MLATPCHGSSLARQLHAELEAWAAGEGARWLRLSVVQDNARAQGFWNACG
YAQVRTRDGIELGRLQHQVRIMIKPLAGDALADYLALMPRDRSEEQVPS
>PFL_4124 transcriptional regulator, AraC family
MSDLLVVSSIDCLSMPVTSIAVDYPNGHEIPAHSHPRSQLAYAIEGVLVI
DTESGRWVVPPSRGVWLQAGVEHRVRMRGAVRMRSLFINVDAIAGLPEHD
CVIEVSPLLRELILAAAQVGTHYSPDSRDGRLMRLILDEMRSLPVLPFSL
PWPHEPRMLRVCQALADDPSDNRTAEQWGDCLAMSAKTFHRQFQRHTGIT
FGRWRQQARLLMSLECLAEGMPVVQVALQHGYDSQSAFAAAFKRQFGTPP
SEFYR
>PFL_0254 transcriptional regulator, LacI family
MSSDQAPGRKRRGAGRVTLNTVARQAGVSAITVSRYFNQPDSVSPERRER
IAAVVAELGYVPNLVAGGLASARGRIVAMVIPNISGPIFAQTIQGFSDTL
SRHGYQLLLASSYFDARQEESAVRAFLGWSPAALVLTSHFHSPGTEKMLA
DTEIPVIETWDYQPQRQPLQIGFSHFQVGVTAARHLHAKGYRRIAFVQNS
APGDFSALERRDGYLATLAELGLAPRVFAPDADRAPFEAGKQAMEALMGS
PERPDAIIFANDNLAAGGLLAGQRAGLKIPEECAVLGFGDYPFAQMLLPS
LSTIQPPALQIGVLAATRVLESLGVLPVAGTVQRLNLLQCRLIERESS
>PFL_1112 PspA/IM30 family protein
MNVWSKLLTALRGGANEAGEALVDSQALRILDQEIRDADQELRKSKEALA
EIMARQKLAAERANGSAAKIAEYESYALKALEAGNEALAQEVAQKIANLE
NDLAVEREQADGFAASVAQLRKAVTQAEGNIKHLKQQVDTVKATESVQKA
QQAVAQRYGGSQSKLHTAVESLERIKQKQAERAAKMDAAAELANTSSPDD
ALDAKLREAGIVAGSTSADSVLARLKDRSKS
>PFL_2355 transcriptional regulator, MerR family
MKIGEIEARSGASRHTLRYYEQIGLISSLRRTNNYRVYTEQTLQDLDFIQ
RAQSMGFSLGEIGEILNAQRNKLIDCAEGAKLIEKKMAEIKQKIANFQSI
YRYLDEERAKLEASAAEQLELQRLNNASI
>PFL_2725 transcriptional regulator, AraC family
MTTPNWIDLAQDADTGIETLRAHFTGHAYDPHWHDSYLVGVTEQGVQQFN
CRRARHQSTPGKVFLLEPGEIHDGEAPTEGGFTYRMLYLDPQWLERELGA
LFAEAPANAQLAFGSTLASDPRLASATSAAFHSLHHGELRIVRQSALDQL
LEQLTGHLHWRRRYAQDPRLPLVAQRARDYLHAHLAQDLSLEALSQACGV
DRFRLSRAFKAAFGLPPHAYLVQLRLSRARRLLAGGAAPAEVATALGFAD
QSHLGRWFMRAYGLSPALYRKRCTKLPDA
>PFL_2167 transcriptional regulator, AraC family
MRESDSVAVYFVRVMTHALRQQPARLAAVLREAGIDPALLDQPRARVPGS
AFAALWLIQIRELQDEFFQLDSRGMPPGAFALICRGLIQEPNLEKALRQC
LNNFGLFLRDVGASLSLRGKRAVISLVSRCADPLRSHYAEETLLVLIISL
LCWLGGRRIPIDRADFRHSRLSLSDDPLLWGSNLTWNAGRTEIEFASRFL
RLPVVQDLASLKVFLRSAPQWLVIRFRNQHGLTTQVHQRLRGSHYSQWPT
LEAFAREVQMSASTLRRRLEREGGSYQEIKDEVRRGVAVELLRRTSVSIS
EIAELTGFQEPSAFHRAFKKWTGESPGRYRARFQPAPA
>PFL_5197 transcriptional regulator, AraC family
MAKPAAVTDWVHRAPPARGLERIEAYFAGHGYDMHRHDTYAIGRTLHGVQ
SFQYRGGWRHSLPGATMVLHPDEAHDGEAGTHDGFHYRMLYVEPALIQQI
LGGQPLPFITGGLSNDPRLFAATEALLRGVDSPLDPLEQEDALFDLAHAL
NSVSGVAQSRQRFDYVAAERAREYIHSALDRTLTLEELAAHSGRDRWSLS
RDFRLLFGTSPYRYLSMRRLDLVRALLVQGQSLANAALIAGFTDQSHMTR
QFRQTYGLPPARWLKMLGR
>PFL_1311 transcriptional regulator, LysR family
MPKHLPPLLALRAFEAVARHLSFSKAARELCVSQSAVSHQVHKLEQHLGQ
PLFVRRTRAIDLTTAGASYYQQIHPALEQIAEATRTLLAAEPSQVLRIGL
LASFATLWLAPRLADFSRRHPQIQLELQPAINLADVAGAEVDLAIRYGKG
HWPNVQATRFLAEQLSPVCSPEFKAGALANGTLLMARSHRPFEWDDWSRQ
NTVDLSPHPSVMLHDYNIVVEAAVAGQGIAMGRRQLIRRHLAQGSLVDAF
DLPALHNDQIGYWLVTAEGPANPAVQCFAQWLLEQGSDP
>PFL_2034 transcriptional regulator, LysR family
MFDALLLRTFVAVVDEQGFSRAALKLHLTQSAVSGHLRRLEQQVGKPLLQ
RTTRSQQLTADGERLMAYARAILALNRDAWTELTRVPFHGRVGVGLSEDF
ADPRLLRALQDFAGRYPGIRLDVQVGIPGTLLDLLAQGNLQLVVGSLCET
AEPGRLLWSEPLVWAGLVQPAGLLPDPLPLALFPEPCPYRAAALGRLAQA
GIAQRTVMLCSSNWALRAAVLSGFAIAPMAASQLGAGLCTLGEEYGLPPL
PDAQYRLFTAPEADQTVLAALSEVFVEYCSSRRSAL
>PFL_3383 transcriptional regulator, LysR family
MSSILDLEIFVRTADAGSISAAARSLGLTAAAASIALKRLETRLGSRLLA
RSTRSMRLTEEGRRYLESVRLALATLEDGELALKQQSLGLAGVLQLSAPS
DFGRNALLPWLDEFKAEHPQLRLQLRLDDRHADLFRDAVDVALRFGVPED
SSLVALPILPGHRRIACASPAYLARCGVPQNPEALAGHSALLYLRNGQPY
DRWRFSRGSETREVLVRGDYLCDDGEVARRWALAGHGIVYKARLDVAEDI
RAGRLVPLLGDWQGEPAPFNLLCPHRLQVSQRVRLLHSFVLQRCRALCP
>PFL_1703 transcriptional regulator, TetR family
MSTIRERNKELILRAASEEFADKGFAATKTSDIAAKAGLPKPNVYYYFKS
KENLYREVLESIIEPILQASTPFNADGVPSEVLSGYIRSKIRISRDLPFA
SKVFASEIMHGAPHLSPEQVEQLNAQAKHNIECIQTWIDRGLIAPLDPNH
LMFSIWAATQTYADFDWQISVVTGKTKLDEDDYEAAAQTIIRLVLKGCEL
DR
>PFL_2393 RNA polymerase sigma-70 family protein
METGDDQQQLSALFIAQRGGLIRMLARVVGCANLAEDLAQETYLRVAKAL
NARPIEHLQPFLYQTAQYLAFDHLRSQRSKRRFEYQPTDASQLSEVPTAA
PGPESHVQGQQQLHLLQQVLATLPKRQQQILVLHKLHDLSQSQIAQRLQV
SLSTVEKDLRHALNACIKATDRQNPDD
>PFL_6078 ppkA-related protein
MASVYLATQRSLERKVALKVMAAALAADPSFCERFLREGKTLARLSHPHT
VTIHDIGNVGELYYMAMEYLPNGTLKERIAAGLTPEQGLTYIRQIASALG
YAHAQGLVHRDVKPANILFRADGTAVLSDFGIAKSLDDRTQFTQAGFAVG
TPSYMSPEQARGQDIDGRADLYALGVVLYEILVGELPYNGTDALSTALAH
LTEPLPELPLHHGRYQHILRKLLAKDPAERYPDAAALLAALDNLPAATAE
VEATLIQPLPLPPQAASQPVPQGNDLAGLTPVSIEIPQQAPRPAPRREPP
EEPPAPPRTANLPPAGSGPSEQRRGPVLALAGVAVAVALAVAGAGYWWLS
GDSPAPEPKTASTAGTTPAVVAPPASQPVAADVDGGQRPLLMPGKKTLFQ
RVLSKPGASFSSEPGAAPGQAVPAFSVLYVYQRKNLDGRSWLRLGAASDG
RSAGWLPAEQVSDWKQSLVLKFTERSGRAPVMFVRQASELERLLADPAAA
KNLLLKAQKNPQDEQQVLALEPNASAVPQDQFYLLPIFDSKESFDDNGQP
VQLLNVASIDPGNSPQSISDSSGKRLPANAPPAAGDAFRTAVVLVVDTSV
SMQPYIDQVRDVVHELQSKIAQRGELDSVSFGLVGFRNNTSKTPGLEYVT
KTLVTLDQGRDPQRFQELVSQVKATSVSSHSFNEDAFAGVMQAVEGMDWK
GYGGRLILLVSDAGALRKNDPYSRTQMNEAEVRQAALGKQIKIYALHLRT
DAGKKNHAQAETQYRVLTADANPKIGDLYIPVPGGDVGKFGERVDEIGTV
FADLVHQVRSNQSQEVPVLAAAPSIAQKSAAIGYAMHMDFLGRKSASQAP
QLVSAWTADRDLTNPALPAFQVCVMLTKLQLNDLQQSLKLIVDAARKTQT
SPKDFFQEIASASAYMSRDPSALRKGGNLADGGVLGEYLEGLPYRSKSLS
MTQDLWLSLSVAEQEDFIDELDSKIRLYETFHNDLANWVRFGDAEPGDAL
YRVPLSTLP
>PFL_3362 transcriptional regulator, AraC family
MSPCALLETRHASTQAVDLDQRLAFWEDYNASTLVGLKCNSYAEGGFAAS
QDNLQLSAMRLARIVGNEHVVERDTSMIRGVPKESIFVSLVTGSGSFFYQ
DGACQVLEPGELVVYRTDKPYLFGFSGAMRQFIFDIPQQQFAERCLKRFD
RPLRTSVESGVQRLLLRTLGERTRGFFQQPLCAEAEAYQEQAFELLASII
AGHVGERPINALSASYLLAAKQCIHEQLADPTLSCERVAAQTGISTRHLA
RLFALEETLPSRFILEKRLQQARQLLCSSQGAGLDISEIAYRHGFASQAH
FARAFKSRFQQTPSEARALGLAATLAIPAAESVGHACGDNLRGLEQGN
>PFL_3638 DNA-binding response regulator, LuxR family
MKKIRVALADDHPLVLAAVSDLLKKTRQYEVVAAVTTPSALVQQLSDDPR
IDVVITDYFMEGDPTFGDGIRLVTYLIRHFPRVQVLVLTMMSNPMIVAAL
YDIGVRSVLPKRHDMSELLSALENVRQGRIHHPPSLVQNELNSSPLRSMA
DGLSSLTPKEYEVLRHFVRGESMMQIAANLKRSVKTVSAQKISAIRKLNL
DSDQALVAFCLESGEFQ
>PFL_1240 transcriptional regulator, LysR family
MRFTLRQLQVFVAVAQQESVSRAAGLLSLSQSAASTSITELERQSSCQLF
DRAGKRLSLNALGKQLLPQAVALLDQAKEIEDLLNGKSGFGSLSVGATLT
IGNYLATLLIGSFMQVHPESQVKLHVQNTAHIVQQVAHYEIDLGLIEGDC
SHPDIEVQTWVEDELVVFCAPQHPLAKRGHATMEELTHEAWILREQGSGT
RLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCISRLALRDAFR
RGSLVPVETPGLDLARQFYFIWHKQKYQTSAMREFLELCRAFTAGVQRSD
EIVLPSIP
>PFL_0792 transcriptional regulator, AraC family
MHPIDIDPYENIPRDALVTAIDYADGQHFAEHQHRRGQFAYAATGVISVY
TEQGNWVVPPQRAIWVPAGVTHAMHMSGPVTMLNTYVRPQAIKNLGLPGH
CQVLEVSELLRQLLLRAVDIPALYAEDSAQGQLMNLLLHEIAAMPALCLN
APLPSEPRLARVCREMLEQPSLELGIDAMAERAGMSRRTFTRLFRQHSGI
SFVEWRQQACLLAAVVRLGQGQPITRVATDLGYSSPSAFSGVFRKVLGEP
PSRYFAQGRV
>PFL_3531 transcriptional regulator, LysR family
MNDLIDLKRVRHLVYLSEELHFSRAAARANLSQTAFSRSIQSLEADLGVR
LFDRDTRTVMLTAAGQQLIGRAHELLGCARKLVAQAIDIAGAEGGELRLG
INPMAATLNTVDILIRLRKQVPRLVLNVQVGYWNQLCHLLETEQLDFVVA
SLKSGEEIDPRFSVTHLPPQPASVFCRRGHPLARQAGPIARAQILDYQWS
GVSPSNEASLYALFDLAPGTLLPWTLSSNDLNLLRETTLSSDSLLLTWRS
WLDQDLHNGLLVDLAPFIQPPWPADVLTIRYAVVTHAGRTLSPIAQQAVD
MIVREAPGSAGLSTFPGA
>PFL_5640 DNA-binding response regulator, LuxR family
MIRVLVAEDHTIVREGIKQLIGLAKDLVVVGEASNGEQLLETLRQVPCEV
VLLDISMPGVNGLEAIPRIRALSNPPAILVLSMHDEAQMAARALKIGAAG
YATKDSDPSLLLTAIRKVASGGRYIDPDLADRMVFEVGLTDTRPLHSLLS
EREFSVFERLAQGANVNDIAQQLALSSKTISTHKARLMQKLNITSLAELV
KYAMEHKLL
>PFL_3810 transcriptional regulator, AsnC family
MKRILDPLDECIIAELTRNARAAHAELAAKVNLSRNAVRQRIERLERDGA
IQGYTIRLGEGRGADTRINALIFVYRYDRMRGADVLQALRAMPEIIQCEV
LSGEFDVLVRVSAASVERVHRVWNDIAALPGVENTVTSFVLSSVA
>PFL_1824 transcriptional regulator, GntR family
MTNLLLYQRIAQQLAEDIRRGVYQPGERVPSVRKMSSQLNVSHATVLQAY
ANLEDQGLIRARPQSGYYVHQTPALTAPTPDIARVERPGLVTRSSIIQQV
LVESRREGVFPLGAAVPSVDYLPVRALHQQLAKVTRFHSPRAFSYMFSPG
FEPLRRQVAIRMRDAGVVVDPSEVVITHGCVDALQMSLRVLTRPGDLIAA
ESPTYYGLLQLADLLGLKVIEIPSDPSTGMSLEALQLAANQWSIKALVLT
TRLSNPLGGTMPEERQKQLLRLASDFDIQVVEDDIYGELMFEVGRTKALK
AYDRLDRVIYCSSFSKTLSPGVRIGWMIAGKYQQEIQRLQTFSTHSACSV
TQMGVAAYLENGGYDRHLRYIRQEYRKNLSAFQLAVQQYFPEGTQITRPN
GGFILWVSLPGRVNTQELHVRALQQGISIAPGLIFSNTEQFNHCVRLNCG
TPWNREAERALMTLGMLASQLCQEAAGGF
>PFL_4562 RNA polymerase sigma-70 factor, ECF subfamily
MSDQPREVIAATVAQVYREQSRRILATLIRLLGDFDLAEEALHEAFFVAV
ERWRSDGVPDNPRAWLVSVGRFKAIDALRRRARFAASQAALLSQLEQLEQ
DDWSAEDVQDDRLRLIFTCCHPALAADAQVPLTLREICDLSTEEIARAFL
ATPATIAQRIVRAKAKIRDARIPYQVPALSELPERLESVLRVIYLVFNEG
YSASMGAELTREDLTREAIRLGYLLLELLPEAEVMGLLALMLLHESRRGA
RLSSDGELVLLDEQDRGLWQQDLIEQGCALVERGLRSGQAGPYCLQAAIA
AVHAEAPSAAQTDWPQIVGLYDVLLRLQPSPVIELNRAVALAQRDGPGAG
LAQVEAILLRGDLQDYHLAHAARADFCRQLGHIAAARQSYQRALALVRQA
PERRFLEQRLAQLPQ
>PFL_4639 sigma-54 dependent transcriptional regulator TyrR, putative
MRIHVSFIDRVGITQEVLALLGGRNLNLDAVEMVPPNVYIDAPTLSPQVL
EELRDALFNVRGVQAVTVVDILPGQRRHLQLDALLAAMTDPVLALDSAGK
VLLANPALIALYGREPAGESVAELFADPALLEALLENGFRLPLREITVNG
QTLLLDATPITDAGALLTLYPPNRIGERLSALHHDHAEGFDALLGESPAI
RTLKARAQRVAALDAPLLIQGETGTGKELVARACHAISARHGAPFLALNC
AALPENLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSP
YLQAKLLRFLNDGSFRRVGGDREIKVNVRILSATHRDLEKMVNEGTFRED
LFYRLNVLNVEVPPLRERGQDILLLARYFMQQACAQIQRPVCRLTPGTYP
ALLGNRWPGNVRQLQNVIFRAAAICESNLVDIGDLDIAGTSVARQNDAEV
ASLEQAVEAFEKELLENLYVSYPSTRQLANRLQTSHTAIAHRLRKYGIPS
KA
>PFL_5298 autoinducer-binding transcriptional regulator, LuxR family
MQSRLAEFDTHLLSGNSLHERMTGTMTLASELGFDALVYDYSPVPFDQAG
ELIIPSAMVCNTPRDWLELWCDQGYYHIDPVQQVALDSSSPFIWSYKPEA
ETVLRQALGQQHAPVSSYLHHHQMAHGMTVPIHLPRGGFASLTGLRSGNA
TVALQDLQQVQGHFTLLAHALQEHLYPQLSKCVRSYPVDLTRRERECLKW
AAEGMTSGEIAERLQRSQATINLHLTSAMHKLGARNRVQAVVRAVHYRLL
GN
>PFL_0336 transcriptional regulator, LysR family
MRYPSITALRALDAVARLGSVTAAAQQLSLTRSAISHQIISLEQSLGFAL
TERVGRGIGLTYQGQCYAREVRRILADIQDAGRRFDGLSVSGKLRISCNP
GFASFWLCNHINGFLRQYPQVQLQVVSPRSQDDTSDAEADLFIAYGIGDW
PGLLVEQIVTLRFSPVCSPRLINAIGGLKTPLDLKDFPLIHMSDTSDWRV
WLAAAGASQVNADSGITFSDAHCAQSACIAAQGVAIGDNLLSGDALARGL
LVRPFDISISALRGYFLVIDPAKAERSVVQAFSAWLKNQLQTSAQHISDA
PSGEP
>PFL_1291 transcriptional regulator, LysR family
MDDLAAFAVLVEAGSFTLAAQQLGCSKGQLSKRISALEARYAVVLLQRTT
RRLDLTAAGAALLPQAQALVAQVERAHQALARLKDDMVGPVRLTVPVSLG
ETFFDGLLLEFSRHYPQVQIELDLNNSYRDLTREGFDLAVRSEVANDQRL
VARPLLAWHEMTCASPAYLEQYGEPRTPQELAGHRCLLNSHYSGREEWLY
HQRHELLRVRVSGPFASNHYNLLKKAALVGAGIARLPSYVLHSELADGRL
RWLLRDYQTRSMPMYLVHSYQGGLPKRTQVLADYLMDWFRRSGEALDRL
>PFL_4049 Sigma-70 region 2 family
MNETDPDLELLKRIGNNDAQAVKEMVTRKLPRLLALASRLLGDADEARDI
AQESFLRIWKQAASWRSEQARFDTWLHRVALNLCYDRLRRRKEHVPVDSE
HACEALDTRPAPDEQLEASAQSRRMAQALDQLPDRQREAIVLQYYQELSN
TEAAALMQISVEALESLLSRARRNLRSHLAEAPGADLSGRRKP
>PFL_4139 transcriptional regulator, LysR family
MSDRDARRLLNDRLDWNLLRTFRVIGQELSISRAAARLHLTQPAVSQALK
RLEEQLGRQLIARRGPRFALTEVGEQIFALAGEIYGQMSQVSSMLEQPAD
EVIGKVRLLIISRISSERFDDFLADFHRQHPRVDLEVEVMRSSDIVSALQ
EKTATLGLSLNRRPQPRLEQRLFLRQRYAFFCGKHHPLFGRGDVAEGDLQ
RENFVSFTSDQIGGMLSPLTIFRDQQGFSGRIVASSPSLEEVRRLVIAGF
GIGCLPEHVVAADTEAGLLWRLPPHEGIADVDIHLLWNREQRMSRAEVLF
LQSIQHMLSQHEPAPGSLMLK
>PFL_3947 ECF sigma factor PrtI
MNDLDQQLRPLIPRLRRFALSLTRQPSSADDLVQACLERALAGWTEKRPE
GDLRAWLFAILYRQFLDAHRRSRRYARMLEFFTGRDDSQPSVERTVMAQS
TLEAFDRLNAEQRALLLWVSVEGLSYKEIAEILQVPTGTVMSRLSRARQA
LRQLSDGEISSPSLRILK
>PFL_4816 transcriptional regulator, LysR family
MDRLQAMRVFVTVVDLGSQSAAADHLDLSRPVVSRYLAELEDWVGARLMH
RTTRKLSLTAAGGEILPRCRQMLELSSDMQAAVGEPDDAPRGLLRISVST
SFGQSQLADAVADYVKRYPGVSIDLQMLDRTVNLVDERIDLAIRTSNDLD
PNLIARRLTVCRSVICASPAYLREHPAPQRVEELNRHNCLTHSYFGKSLW
HFEQDGEQVSVPVQGNISANEASTLLRTTMAGAGIAMLPSYQAGEYIKRG
ELVRLLPHAEPRTMNMYAVYASRKHMPATLRSMLDFLVLRFPQQPLWDEG
L
>PFL_4654 acetyltransferase, GNAT family family
MSNVRIRQATTDDLIGIFEAHRNSVERLCTSEYSDQQIRMWLDGRSPETY
REAVEKGSLWLAEGEQIEGFVELDGNEVSKLFIRGDVARRGLGSRLLEVA
LARLRASGASSAYLEATLTAEGFYAYHGFQKIGEGTFSRGNSPVSIEIIK
MERPL
>PFL_2986 transcriptional regulator, LysR family
MPNFADLELFILIAELQGLSPAARVMSITPAAASLGLKRLENRLGVRLFT
RSTRTMKLTPEGARYLESAQHALKILANGKRSLRHDDGMLELTVSSDLGR
NLLLDMLARLKQERPRMYIKLALSDKEEDLLKGRFDAALRYGKNLALDLV
ELPVLKQHYFIACAAPEYLAEHGQPESPEQLSEHECIICHSIGRPESRWR
FHGAGKVEDVPVQGHFCCDDGDAARRWAVAGHGVVNLPLLNVVEDLLAGR
LLALLPGWQSDAAPLNLVVSHRSQITSSLRALHQCLVEHCTDRMARYQAL
TQDTR
>PFL_3054 transcriptional regulator, LysR family
MDIDLARTFLEIVRSGSLIAAAERLHLTQTAISARVQNLEGQLNCKLLVR
NRAGARPTADGEAFISYANQLVQTWEAAQRDLPLLAGYRNVLHIGGELSL
CSPLMLNWVRRLRQALPNHAVRTQIGEGASLQRQLELGVLDAALVFQPLY
SPGLQVEQLLEEKLIQVRLAGRPEPYVYIDWGEDFRRQHDAALPAQAKAA
VGFNLGPLALQFILDAGGSGYFRTRVVQSYLDSGVLERVEKAPEFNFPTY
LLYARERDTPELQQAFAVLREVIESDTDWSQRWSPMV
>PFL_3156 RNA polymerase sigma-70 factor, ECF subfamily
MSWTRRAHPVRKKEAQDARKAPQPEGQTGGKSQVGKDTKDTVSHLPLWNN
PPPRSADRPPMLPTPSLLRSFQEHYDDLLKFLTRRMSDRQRAADVAQETY
LKLLKVDPQTVEVHNDRGFIFRVAGNLAIDTLRREQRLAANLSDGQEHAE
AVDPAPAPEAVLLAKERLAVLDEALAQLSDNARQALLLNRLEGLTQAQIA
LRLGVSESMVAKYIGQALRHCRDWLKVHHE
>PFL_0348 transcriptional regulator, IclR family
MHYHTPTDRLLQILVALGQSPEAMSAKELSLNLQQPLSSTYRHLKTLLRW
GLAQDNGQGRYLPGPACLQLAKKFDREGLLVTLAKPELNRLAELSQESVA
LMVPSNGQAICIELVDSPQPLRCCYQKGLAQPLLLGASAKVLLAYMEPEL
CLSILRQQGVEEADFAAHLDSYGAIRAAGHAVSLSEIDLGIWGVSAPLLD
SRDRLQGAISLMAPAFRAEQRSERLIRWTREAAQRLSARMD
>PFL_2614 DNA-binding protein
MHKENVQRASVLQHVSLNVRRLRNAAGLSQSALAEKSNVSRRMLVAIEAG
EKNVSLGTLDRVAEALDVAFSDLIQAPESRDSSRINELAWAGAIPGSKAL
LLAKAEATREVELWEWQLEPGEVYHSECDAEGWSEQIYVFEGCLTVFFGD
TERRLECGDFFMFASHVPHGYRNDGTRATRFVRNVVI
>PFL_1307 RNA polymerase-associated protein HepA
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNA
PLTRVRFSPGDSITHFEGWKMTVQEVDDVDGLLVYHGLNGQNEAVTLPET
QLSNFIQFRLASDRLFAGQIDPLAWFSLRYHTLEHTSRQLQSSLWGLGGV
RAQPIAHQLHIAREVADRIAPRVLLADEVGLGKTIEAGLVIHRQLLSGRA
SRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDASNPFEDTQLA
LVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSPEYALVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPV
AEAVQELMDKGRLSPEAHKTIHGFLGNEGEALLAAVNDGDSEASARLVRE
LLDRHGTGRVLFRNTRAAVQGFPERKLHAYPLPCPDEYLELPLGEHAELY
PEVSFQAQPDVSDDEQRWWKFDPRVEWLIDQLKMLKRTKVLVICAHAETA
MDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGAQVLICSEIG
SEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETS
PQERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDGEWQALI
DAARGERERLEAELHTGRDRLLELNSGGAGEGDALVEAILEQDDQFALPI
YMETLFDAFGIDSEDHSENALILKPSEKMLDASFPLGDDEGVTITYDRNQ
ALSREDMQFITWEHPMVQGGMDLVLSGSMGNTAVALIKNKALKPGTVLLE
LLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSARVAFETLNDQLES
VPKASANKFIQAQRDQLAPKINAGEAKVAPRHAERVAEAQRRLAADTDEE
LARLTALQAVNPTVRDSELVALRQQREQGLAMLEKAALRLEAIRVLVAG
>PFL_0154 transcriptional regulator, MarR family
MNISSGMVVASRHWRRICQTTLVNFGISEACAVPLLMIGRLGEGVRQVTV
AQAAGMESPSLVRLLDQLCSAGYVCRSEDPHDRRAKCLSLTDTGRELVQA
VESELVRLRHEVLEGIGSADLEAALRVIRAFESASHVPVLPS
>PFL_3830 transcriptional regulator, LysR family
MDLVQLEIFKAVAEQGSISAAAQLIHRVPSNLTTRIKQLEQDLGVELFIR
EKSRMRLSPAGWNFLDYARRILDLVAEARLTVAGEEPQGPFALGSLESTA
AVRIPALLAAYNQQYAKVELDLSTGPSGTMIDGVLSGRLVAAFVDGPVRH
PALEGLPVFEEEMVLIAPLGHAPITRAREVNGESIYAFRANCSYRHHFES
WFTQDAAVPGKIHEMESYHGMLACVSAGAGLALMPRSMLESMPGCATVSV
WPLSPRFRFLRTWLVWRRGTVSQSLSSFVKLLEERGAVLAEV
>PFL_2350 transcriptional regulator, TetR family
MARRSNTDERRGQIVAALQAVMAKAGYAGATVAAIARHAELAPGLVHYHF
KDKREILVALVDSLAGYAHQRYESRAAEAQTAEQRLQAYIAAHLAYGSDA
QPDAVAAWVMIGEQSAHDPDVREVYQAVLAAQMKLLKGLLRQRFAERGRR
ARGLDALVAGITCFIQGAFTLSTTARPLLPTAFAAPTLIAWVERYIDGEE
ER
>PFL_2213 conserved hypothetical protein
MVWQILSKADKAMSTMNISLPDALKSFVDDQVSQRGYSTSSEYVRELIRK
DQDRQHLRGLLLAGAQSAPGTAVQGDYFESLRARVHKARG
>PFL_1480 transcriptional regulator, GntR family
MSEGPIPLPTLRQVSRDTLQEQVYRQIREALMSGRFQPGQKLTIRGLAEA
LGSSPMPVREALQRLSAENAFEVTETSRLRVRMMTVERLREIRDARVALE
GLLAEKAVQHLHKADMQEIADLCRQMQKAADEVDVSRYLWTNFAFHRRIY
AVARAELTMAAVENFWLHMGPCFALVAPDKAHLQRSMEAHNRIVEALVAG
DGPAARAAVTDDIMQAADSLGRLLAKSDGAAQRKGGRA
>PFL_0212 transcriptional regulator, LysR family
MHIDLRQLRHFIALAEQRSFVAAAAAVNLSQSAFSRSIQALEHSVGCQLV
DRGRKDLAPTKQGQLLLEHARRLVSGAQQMANEISQFNGLEAGELRFGCG
PAPAAGLIPRAIGSFIGRYPKARVQFQVDDWQSLSKRLLSEEFEFFVADT
RHFEADPDYLTQRLRPRKWHFCCRAGHPLAQRESVSASELMSYPLAVTIR
PPNLRKVIVDLSGKPDFTPNVECENSYSLLGVVMRSDAIGIVGSYSDALH
NAKGELVCLKIDGLADDLEELYTRYGIVSRAGYRLSPLAAAMIDEIKRID
EQDEDVCSLDNLAV
>PFL_2731 transcriptional regulator, AraC family
MVQQLSTRYWPEHQCQPRWAEAIGNAYFPLSLEFSSDRPFQGNLRIWETP
SSALALSRLRSSRLGYSRSKAQVSNDTQACYLVTIPRRHEVLFEQDGREL
HCRPGSFIFERGDAPYRFRYASDNDLWVFKLPEQALHGQLRGAERYTRFC
FDARRGLGRIFADQLAMCAARFDECAPAARHMLLEQALATLLLTLRQDER
VLSSESSSLAALHLQRIESYVEQHLGSAELNPRQIASACGISLRYLHKLF
ADSPFSLGEWIRQQRLCAVHRQLRDAHCRLSIGELAARWGFADQAQFARH
FRQQFGCTASEVRAGQGTAVPRH
>PFL_3032 conserved hypothetical protein
MDRQAASPCARACYACVVAGVMDAPDTPPVHWLMAQMSLISPSTEKKSPG
ATAERILFLLKTRGPLKTADLAPLLKVSQEAARQQLQKLVDSELIVGQLM
PAQGAGRPSQKWVLTELAQARFPDTHANLTLQLIDSIRAVYGTDGVERIV
SDMERANSAEYLSVCAPLPTLEQRVRALAQIREVAGYMASVEADGDAWLL
IESHCPICVAAQQCQGFCRSELQVFQAAIGELGQVQRVEHLITGDRRCVY
RIRATPVS
>PFL_3021 transcriptional regulator, AraC family
MSSTAQFWRDPNLPYVESRRACDSRANYKAHSHPTVSIGAVDRGVSVFSG
GAQGPTRIQAGSVVFVPADCAHACNPLPDSAWSYQMLHLDPRWVDAVREE
AQQHGAALSQVVLSHDSGLYQAFCRLNQLLFSSASWQHKEAALIEFIGGL
ATREQPVIALAADPARASAGVRRVVDFLQCDPQQAGPLEHLAELAGISRY
QLIRAFRAATGMTPHAYQLNQRIIQARASLQAGEASAALAQRLGFADQAH
FQRVFKAHVGVTPGLYKA
>PFL_5189 transcriptional regulator, MerR family
MLPGLSLPLGKGSACPAAQPHQGRSMLTIGQMARCHGLTTKTLRHYNSIG
LFTPALTGRDNGYRYYSPEQIVTLGRIAWLRQLGMSLEDIRTLADQGGLD
SVLHMQQSLQAHARQLQSEIARSQKVLGHLQRYLAQPQRQLPAAQTPQKV
FLASQRIIGMAWQQDDPGTIAELWQRFEPREQEIQRLAEPVGTYGICQPL
EDGQWRYVAGLPVAADAPLVPGMVELEIPARHYARVEHHGSVATLPETFR
AAYSEWLPAAGLMPIDAVEFEYTGERFLGPMHPDSVVELYIPLSA
>PFL_5421 transcriptional regulator, AsnC family
MSKLDRYDLSILAELQRDARISNQELAERIGLSPSPCSRRVKQLEDDGYI
SRQVALLDRKMLGLSLTAYVLIGMDRHTPERFENFEAAIRSLPQVLECSL
VTGVDADYQLKVVVPDMDHYQKLLLGHLTRIEGVTSVRSSFVLNQVLNST
ELPLTHLRN
>PFL_1828 conserved hypothetical protein
MPALPGPPSGGLVIAVFRQRGGTIARCSGSRCCQPTHGAIEEALMQKWQV
TFVDDHGVQSVEHFDCDQQPTMERAAQLVRAKLLPVSAELDLNDLDGRTE
DPTLKSLKEQNSIQILSITPI
>PFL_4905 conserved hypothetical protein
MQLTYPKAPVDGVQHLRSALQAALQTQGFGINRGFAKASARNLNLSQAFR
GYALSLEDLAQGKGLAEAKAGDWHYLVFDAGVSIADAQLTEVAGKVGFSA
LNHGSLAASAVNALDLAEQAPQLQGKSYELRLLFISALQVTAIWLHGPGE
EVLIPIEPTPKTLAAHQLHSETALLALLAPAALQAKAIFDADTSGTLGG
>PFL_5538 transcriptional regulator, AraC family
MAAPTLTGGKLTVGIQGTHAELGVLLYPGVQMAAVHGLSDLFEVANRIAG
EQPQAQLPRLRVSHWQASGELPPVRVHDSLAEAPGALLAVLIPPSLAGFS
SHQSSAALMDWLRQQHAAGATLGGVCVGSILLAESGLLDGRSATTHWTSA
QAFAERYPQVRLEADKPIVDDGDLITSAGLMAWAELGLRLVNRLLGPSIA
SATARFLVMEHSASASQCGSNFAPILSHGDGAILKLQHWLQANGAVDVSL
PVMAQQAGLEPRTLLRRFRAATGLKPTQYCQHLRVGKARELLEFTNGSID
HIAWTVGYQDPATFRSLFRKITGLAPSEYRNRFGATSTAASRVP
>PFL_0760 transcriptional regulator, AraC family
MNSKADGQFREIRIDRFDLEGARNWMAGICGPHRLETANPERIRFHHSAN
VLRSRSTTLGIIEYGTDVVVDIQDTERFSSYSLSLPLCGEQELSKDGRLL
RSDRGQGVIIAPNESQVLAISGDCRKLQVVISRPAMSEALEGLLQRPVLE
PLRFEPGMDALHGAAAAWWRMAQHFIGELAQGNELYEQLAFTREIESSLI
KGLILAQPNNYSSELRAMLGVKLPHYLVRARQHLHEHARETVHLEDLEAA
AGVSRFKLFEAFRKYFALSPMAYLKRHRLNGVRQEILEHGSARNISEIAL
GWGFTHLGRFSAEYRKLFDETPSVTAQRHPARRPAGF
>PFL_4674 helicase, SNF2 family
MMNRQPVLIEKAVFDGYDFGIQMPFIEGANKVLLRRGGFFIRRGEHPLNR
HWRIPKNKLNSELDLVFHELIELGQDRFTESWQSFQEKLEQAQASPQRDA
FIWGMQLRIAPLAGRGVLLSGDYHPGVVAVARRMRGVFLGKSTSWRIDAS
AELVRSNLILELGLAEEQIGLLDIVQELLDDGSVAPAEGIPRISLGGPPQ
EAMEATSTEEVSNEIYLAAVSPIERTEYSAQAISKALEGYSLLDHQPAGI
AHLLQRTSALLADDMGLGKTRQAVIAAHIRAAGLPILVVTLSSLLINWER
EIHVVYPAATVAQQKFAPEAQWMIINYERLGDYVTVAERYAVMVIDEAHR
LKEPTALWTRHGFDIAAKIPNRYLLTGTPILNRETELHTLLRLSGHSIGQ
LPLKDFCEQFSGSPEFRQNLRAQLGDWMLRRRKDVLPGLKSKQRQLLAIA
MSDEERRQYDVIRLEDKPIFARLGALRFYLEQLKIRIAMDLLSELDPDDK
VILFCEFKPTVAALKALCEEAGIGHVTLVGSDSPAKRQKAIDRFQQDPDC
RVFICTTSAAGTGNNLTAANYVFFLGLPWTPGQQDQAEDRAYRNGQLRMV
IVKIPLIEASIDQQLWELLLAKRQVSLELIEPEGQQEALAKTLLAASMGH
>PFL_4181 DNA-binding response regulator
MHVLVCEDDELIASGIVAGLTAQGLTVEHVATASAARAMLGVADFDVMVL
DLGLPDEDGLKLLKQQRQQGLEIPVLILTARDSVTDRVDGLQAGADDYLL
KPFDLRELAARLHTLLRRVAGRSVNLIEHGRLTYDPSTRETLLGGQPVDL
SRREQSLLQALLHNRGRVLSSEQLKDSVYGFNDELESNALNVHIHHLRRK
LGNGIVETVRGLGYRLGPADGEENR
>PFL_2582 transcriptional regulator, GntR family
MPLDLPLPQHCDEAPGKQDSAYSALRQAILEKRLPAGCRLPSTRTLAQRW
GLSRGTLEVVFDRLRSEGYVSRASGSGTRVCAVVPDLYLSAPARAAAPIV
SESEPPYPPLSVRAGQPFVARLADPALFPLQRWTRSLTRALGNASAQSLW
DADPGGLPALRQQIAQYLGQHRGIACEPQQVMITTGIRHGLDLLARSLLQ
AGDKVCLEDPGYLSARSLFALAGARLVPIPVEEDGIDVQQLQHHQDARMV
YVTPAHQAPLGMTMPVSRRLALLEWARHSEAWVVEDDYDSEFNYQSAPLA
ALKSLDRDDRVIYCGSFNKTLFAGLRVGFMLLPERLRPRLLATLQDTGRS
VGVIEQLALADYIASGAFLRNLRAARQAYQERRDLLLAILASEAPGCYSI
SGQQAGLHLLLTLPPGSDEARFRQRAAQQGLLLQGLAEHCQQVRRPAAVI
VGYAALSLAQIRFSGSRLAALLVAEAGPVEGR
>PFL_0299 conserved hypothetical protein
MNRDSRYLESILHHDIPLTRDMGLQVLDWQGQELRLHLPLEANVNHKSTM
FGGSLYCGAVLAGWGWLHLRLKEQGIDDGHIVIQEGQISYPLPVTGDAVA
ICAAPDDKVWNKFLAMYQRYGRARLTLHTRVVNAGSAEDAVRFTGQYVLH
R
>PFL_2810 transcriptional regulator, LuxR family
MPLDLHSLAWHRSIGKLILQLNRPEFWSSLIRTLNEYVQIDNWVVLIFSN
QQVQVVSLPEVADAEEVDAFIHLYVKGLYLLDPFYIANRENPQSGFFHLL
DIAPEYFVETEYYHKYFAQYICVDEVQYNIQLDADRTLCISIGSNAHFSQ
EHITMLDIIKPWVTALMHQRMCFEVDVEKSLSEPPQWPETITQFGTQITT
RESDVLRLLLSGFSNKEIAGKLSLSTETIKVHRRNIYAKLNIKSQSELFA
RFFMPRQDVLSLS
>PFL_2496 transcriptional regulator, LysR family
MEYELQDIRSFVKIAELGSFHEAADALHLSQPALSRRMKKLEEGLGTALL
DRTTRKVSLTSVGRDFLPKARRLLDDFDDSILNIRELAERQIGQVTLACI
PTAAFYFLPSVIRLYNLRYPKIRIRLLDLSANEGLEAVLRGEADFGINMM
SGQHPDIEFVPLVNEPFVLACRRDHELAERSSVTWSELSDYRLIGVGRLS
GNRMLLDHALSGLSWRPQWFYEVQHLSTSLGMVEAGLGVSAMPSLAMPAA
DHPTLVSVPLTEPVVNRTLGLVSRRGASLSPAAEKFVSILLEQWPH
>PFL_1046 ATP-dependent RNA helicase RhlB
MLKALKKIFGKSEAEPLAPSPSAPSPSSSSRHDGRQPERSAPATAAKKEP
VNTPATPSAPKAPRQEKPKAEQPKAEQPRRPRAPKPPVSTWKLEDFVVEP
QEGKTRFHDFKLAPELMHAIQDLGFPYCTPIQAQVLGYTLAGKDAIGRAQ
TGTGKTAAFLVSIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDA
AALTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDFNQRGD
VHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTE
DVMNLAKQWTTDPAIVEIEAENVASANVEQHIYAVAGADKYKLLYNLVTD
NGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFR
EGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGAD
GVSISFAGEDDSYQLPSIEALLGRKISCEMPPAELLRPVERKRPQA
>PFL_2143 transcriptional regulator, LuxR family
MSLTSSIANLETPHFYFELGQLISSSGHPQFASEMLQLVDKLVPLTQLVL
SEWTLDERQASPLAITLLGRAGLHKDLPLPEPPRRHDPLLQQMLEMDDSL
LIQMNAQARSGPSRTTAHQCHLVSRKANRRCVIALYRAPDQGGFSLSELS
FLKSLSQTLLPLLERHAQLHRQQALKNLRSWSAKPADALQQTPLQREFDE
RLSLGDITLSAREKEVCLGLLTGGTVPEMAQRLSVKNSSVETYLKRAAAK
LGVSGRHGLAKWMVGA
>PFL_0008 DNA-binding response regulator
MRVAILDDEPAELARVEQTLREIPGPGEQPWTLHSFERGEDLLRQLRRET
FDLLILDWQVPDLSGLSLLRWTREHMDSPPAAIMLTSRDAESDIVQALNT
GADDYLSKPFRPNELKARVNAVLRRHGLQRNHSEEVQSFNDLSFDDAELT
VTRAGAPISLTEREYRLARCLFANLGRPLSREYLYERFWTHEEIVSSRPL
DTHIYRLRNKLGLTADRGWQLLTIYGYGYRLESVASPEEQGS
>PFL_4531 transcriptional regulator, TetR family
MTAPKRLTDLKRSAIVQAAISEFRTSGFEITSMDKIAATAGVSKRTVYNH
FPSKEELFAEILHQLWASISAQSEIIYRSDLPLREQLEKVVRAKLQLLAD
DNFLDLARVAIAAAIHSPERAQNMVARLGEREEGLTLWIRGALADGRLKP
VDPEFAATQMHGLLKSFAFWPQITMGQAPLATGMQNQVVESALDMFLGHY
QA
>PFL_1162 cold-shock domain family protein
MRQSNNKKMRYGFMTTRETGNVKWFNDAKGYGFIQREGGADVFVHYRAIR
GEGHRSLTEGQQVEYAVVEGQKGLQAEDVVGL
>PFL_0141 transcriptional regulator, LysR family
MQLPDMNLLVALDALLDEGSVVGAARRMNLSPAAMSRTLTRIRDALGDPV
LVRAGRGLVPTPKALELRSQVRDVVEQAALVFRSADKVDLGSLQRRFNVR
ANDFFVGVYGGRLIDTLERQAPLCELRFVPEGDGDDEALREGRIDLRISN
TRPLTPEVKVQNLFTTAFVGLVREGHPLLDEDITAERFAAFPHISMSRRG
IARGPIDAALAEQGLERRVPLIAPSFHAAMFMLPDSDLILPVPQETLLSV
SRLGLRLRSFVLPISLPTLVLTQAWHPRYDKDPAHKWFRETLRTSCQATW
QEAQPTSS
>PFL_5146 transcriptional regulator, MerR family
MKPFPPAVDEDTAPDTDCQEQGWLPIREVARQTGVNAVTLRAWERRYGLI
VPRRTPKGHRLYSSEQVQQILTILTWLNRGVAVSQVKPLLDSDTSSSPQV
ENDWLHLRAALARAISQLAERKVDDTFNQAMALYPPRTLCEHLLMPLLAE
LQQRWQGQFGSQMEQVFFYSWLRSKLGARIYHNNRQVQGAPLLLVNQSDL
PLEPHLWLTAWLASNADCPVEVFDWPLPAGELALATERLQARGLLLYSGK
ALNPAQLPRLLSGVACKKFIVGPAVCIHPAQWSVCTTEIADLYLAQDPIA
ACQLLLERGLF
>PFL_2263 LysR substrate binding domain protein
MHGFNDLGFKALRLFIAVLDQGSFSAVARREGLAPSSISRQIQLMEQALG
QQLLYRHTRAVSPTEAGRLLGHHARRVLAQWEEAEQALQEQQDEPAGLVR
INAPVVFGQRHLSPWLGELHGRYPKLQLDIQQTDRYIDPLQDGTDLLFRI
GTLEDSSMQARLLAPQRYRVAASPAYLARHGTPQHPEQLQRHQCLAYKGE
TGQQRWFFRQGRADWTPYSVKGPLTGNHADTLTQAAEQGLGLVMFPSWLI
GEALHQGRLVALFEDFDVATSLEPQQIAALWPGSRRLSVKVRTVIDFFVE
KFGPEPYWDRRPAP
>PFL_3594 transcriptional regulator, LysR family
MDNPLRLPSLQALQTLVSVAQTHSFTESAARLHLTQSAVSRQIQQLEEHY
GVSLFERSSRRVSLTEQGRDVCTVATQVLRSLGSLQERLAPAPLDRPFRI
RIFVSLAVRWLLPRLSGFYAANPGLCLSIETVGGATVDPGGDCDAYVLYL
PEGLDERPLTPLFDEYLVPVCAPTLSDGQLPPRSLEELAGHALIHGSTSR
QEWTAWLQAQDDQTPHSYKHLLFNLDDLALDAAARGLGVAMTDLILAQDS
IARGSLLIPFGQALKTGGVYALWLRDSGAAHPACETVLNWFQAQAAERDL
PAAQGLAGTIAAALGTPGRQSIPG
>PFL_2247 transcriptional regulator, putative
MPSLRDLITDPALDLTPSERKVVRALLDHYPRNGLGPMSRLAEHAGVSDP
TIVRLVKKLGFSGYGEFQEALLSDMDDRLRSPSTLLRPRSQVAQGDTWGR
YLADSQRVLQDTQALTQPEDIRVLMDWLLDSRHSVYCFGGRFSSFLALYL
FNHLRLMRPGCFFLDDNAQLPDRLFDVQRQDLVLLFDYRRYQSQAMRVAS
AVKARNARVVLFTDIYASPLRELADLVISAPVESLSPFDTLVPALAQVEA
LVACLTPRSPHLDQRLEGIDALRAEFATHVLEEK
>PFL_5951 transcriptional regulator, TetR family
MAVSASPQPTAARTPRQDGQATRQQILETAGQLFAELGYANTTSKQICEN
SRANNASVNYHFENKDGLYRAVLREAHDRLVRIETMISLSESQGSPEDKL
RAIITVLIEGLGNQREGWALKVLTRELLSPSAVLPAILEEQAFPKAKIVR
TILGQIMDLSPEDPVTLRSAVSVFAPCLFLLIAHQPLARNVLPGLELDPP
ALIEHMMSYALAGLAAVSRTPGV
>PFL_3186 transcriptional regulator, AraC family
MISSSPLVDWLLEGLELDASLFHVGRYCGGWHASTQGLARASFHLIVQGH
CWLHIDGAPQALRLDAGDAVFLLQDLGYRLSSAQQAEAAQQLPRTPMVPL
EPGAQDGVGLVCGFFHFKPGLSSLIIDSLPGWLILRAGDPSLSAARALFQ
LILEECQRTPAPSSALLERLSHLLFLYVLRQQVNANQDLGGLVALARHPG
FAPLLEQLIQRPGEAWPLESMAALTGLSRSAFFKRFNELAGQSPGQVLLA
LRMRHACQLLKANQTVEQVGAAVGYQSIAAFTRAFTKAVGLQPGAYRKQH
EGR
>PFL_3621 transcriptional regulator, IclR family
MIQSVSIAARFLNTLANAEGELALGEVARRTGTGGSTAHRYLQSLVKEGL
AKQDPLSGLYDLGPAALSIGIGALKRIDAVDIAAQRMKALAQRHAASGGV
AIWTDRGPTLVRWYRSAYFSINPLALGDILPIDNTACGLVFQAFLPKAVI
DAARKQQPAHFRGTPPSAAVLDEVRRRHWAELTSHLLSNVTGQAAPVFDA
QQEIVCVMTTVTDLGQLQAPQDRDALFHEAAQVNQATGGQRVPQEALPAR
P
>PFL_0926 BolA/YrbA family protein VC2515
MYDVRPARTGRRLRLSMQANEVKSFLEGKLPGAQVEVEGEGCNFQLNVIS
DELSALSPVKRQQSIYAHLNPWIADGSIHAITMKFFSRAAWAERT
>PFL_0690 DNA-binding response regulator, LuxR family
MKVLVVDDQPLIVEELCEFLESSGYRCVPCQSSRQALECFNRDPEISLVL
CDLHMPDMDGIQLVQELQRMAGKQRVFEAIMLTGQSDKQDVIKALRAGIA
DYYQKPIDLDELLEGLQRQEVALQERQKNLHLGHLNQKLQFLSESIDDLY
QDLDKVRRSPATSRSEEPRGEGAGEGDAIEIPAIFNQLSPRQLDVARLVG
KGQTNYQIACELGITENTVKLYVSQVLRLTHMHNRTQLALALSPSNSGLR
QRVTAH
>PFL_3236 transcriptional regulator, LacI family
MASVKDVARLAGVSFMTVSRALNTPEKVNQETLAKVLQAVETLGYVPSLS
ARKIRGGASRGKTIGVFALDTATTPFAVEMLLSMERTAREHGWNIFILNV
FEVPPSQQTIDLMLSHQPDGIIFSAMQLRTVEIPAGLRSLPLVLSNCVSL
EPGVACYVPDDADGQYQAVRHALKRGYRRPLCINLPQASLAWQPRQLGLC
RALAEAGISVADVPQYSLSQDDAYQETLSVLETQLRESQEGPAFDLLICG
NDRIALVAYQYLLSRGLRIPNQVAVLGYDNMIGVAELFYPPLSTVQLPYY
EMGRRSVQYIIECRNEPGIQRVECPVVERESC
>PFL_3812 transcriptional regulator, LysR family
MKQKSLPPLNWLRAFEVSARCLNFTHAAEELFLTQGAVSQQIRQLESHLG
VALFKRLPRGLDLTEEGRSYLPVVQDAITRLAVGTNEIFGQHKRRPIKVR
GSLAFFVHWLAPKLADFQHRHPLVDIRYISNIWVKELDGEDDLEIRWGHG
HWPGLVAQRLTWDTLFPVCAPALLDKAPLEVPADLARHPLLHVLGYEEGW
GYWLQRAGAEQVDSSRGMQFDTLISTLRMAELGLGVALARSSMVDQMLAD
GRLLEPFSQRIEASESFYLVRGAGADPHPDALEFSTWLVEQAHRHK
>PFL_1246 acetyltransferase, GNAT family
MRQHSVVHTPKLSDYPELTQVWEASVRATHDFLPDSYIELLRKLVLTRYL
DAVMLICTRDARQRITGFAGVAAGKVEMLFIDPAHRGQGLGRQLLQYAVE
HLNAQQLDVNEQNPQALGFYFRQGFEVVGRSEQDGMGQPYPLLHMRLKQA
QLQARRG
>PFL_5558 DNA-directed RNA polymerase, alpha subunit
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSS
MPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTL
TLSKKGSGVVTAADIQLDHDVEIVNPDHVIANLASNGALNMKLVVARGRG
YEPADSRQSDEDESRSIGRLQLDSSFSPVRRIAYVVENARVEQRTNLDKL
VIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPVVVEQEDEIDP
ILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
>PFL_3379 Putative sugar diacid recognition family
MFELDHDLAQDIVDRTMAILPYNVNVMDSQGLILGSGEPERINTRHEGAQ
LVLANGRVVEIDEPTARQLKGVQPGINLPLLHDQRLIGVLGITGDPAQLR
TYAELVRMTAEMLVGQRHQQAEQQWRRQRCDDLLALLLSDGGDSPRLVDE
AQQMGLKPQLARTPYLFELAQEPASGQGVDSLSSWLLSRYPDSWCVSSSK
SSLLWCRPASLSLDNPRLLEKLDGQGWNILRVAVGGQAEGLAGLRRCYRR
VGDLLAYGRDILPDARLLTLNRYRLPVMLWRHRNDDALDELLTPLRKVLA
KDSNGQLLATLRSWCDHDGQSQACADALGIHRNSLRYRMERIAELSGVDP
LRLDGMLALYLGVQLLPHRSEPA
>PFL_3804 transcriptional regulator, LysR family
MSDIEKPNSRLFDLDLLRAIVTVADCGSFTTAATRLHSTQSTISQKIRRL
EEMVGQRLLERGNRDVLPTDAGETLLGYARRLLALNDEMFEALSGATVVL
TVRIGVPDDFAAGRTTEQLAAFNRRYPQVKLEVTSGMSRDLNASYDRGEL
DLVVLKQLRNSREALACWPEKTRWVDSAKNPCIDLDPLPIVTFPPRGVYR
DAMINALEAVGRRWHISFTSSSLSGLQSAIADGMGIGLLPLRAVTAGHQV
LSKSTGLPSVDVFEVALLHRPAADPMVKELARVLSRVLAQDTQG
>PFL_4020 acetyltransferase, GNAT family
MPHPAVTRALAPMPPTIRPAALPDLAAIEGIAKRAYAPYIARIGREPAPM
LEDYSCLVLARQVWVLEEQQAIAGFVVLLDAHQALLLDNLAVHPEAQGRG
HGRQLLAFAEQQAVAAGHSCVRLYTNAAMSENIALYSRHGYVETHRAVEH
GLHRVYMSKPLD
>PFL_0761 transcriptional regulator, AsnC family
MPTMTLDSTDLRILYFLQQDGRISNQELAEKVALSPSACLRRLRLLETEG
IISGYRAQLNAERLGIELEAIVHVSLRQDVEGWHETFIGKVQQWPEVVAA
YVITGASNYVLRIQARNLKHFSDFIVNHLNRASGVTDIRSEIVLQKIKEQ
NSLLDLVQRK
>PFL_1593 DNA-binding response regulator
MSDLLLIDDDQELCELLSSWLSQEGFLVRACHDGLSARRALAETAPSAVV
LDVMLPDGSGLELLKQLRNEHPDLPVLMLSARGEPLDRILGLELGADDYL
AKPCDPRELTARLRAVLRRSHPVAASSQMELGDLCFSPLRGVVNIDEQDI
TLTVSESRLLEALLKQPGEPLDKQELAQIALGRKLTLYDRSLDMHVSNLR
KKIGPHPDGRPRIVALRSRGYYYSL
>PFL_2927 transcriptional regulator, TetR family
MRPKEFDPEQIADAAMQVFWQRGYAATSIQDLVEGTGLSRSSLYNAFDSK
HGLYTCALKRYQQMTSANIELLGADAPARELVRRLLMRIVDNELEDTRRL
GCLAANASLEMAGQDAAVAQLVAQNFQRIEAALEQVLRRGQEQGEIDPQK
NPRALASFVVCTVQGLRVLAKGSLAEQRRQRLLDVVEVVLASL
>PFL_6207 transcriptional regulator, LysR family
MDRFQEMQVFVCVAQEQGFAAAARRLNLSAASVTRAVAALEQRIGTQLLV
RTTRKVHLSEAGQRYLEDCRRILAEVQDAEASAAGIHAQPRGQLSLTAPV
LFGDLFVTPLLVRYLQRYPQVSINALLVDRVANMVDEGIDVAVRIGELPD
SGQHSIRVGQVRRVVCAAPGFLAAHGCPQHPDDLRQAPLIAPSSTGQARH
WQFNDAGRALSLRPEPRLLVSANQAAISAACLGLGLTRVLSYQVADQVAA
GQLQIVLADFELPPLPIHVVYQGGRKAPARVRSFVDFAVQALREHPSLNT
>PFL_3610 RNA polymerase sigma-70 family protein
MIAAVSYLSDKLELYLSHRTALVDYSAPIVGCRAQAEEVVQEAWLRFCGQ
ADSAAQPSNPVGYLYRIVRNLSFDLLRRSTLENRHPDGADLLNELPSSTP
SPEHQALHSDQLRLLQDALALLPERTRRAFHMHRLQHLTFQEIAAELKIS
SSLAHQLVRDALTHCAEHLADD
>PFL_4099 transcriptional regulator, TetR family
MSSRPRAAMIEQTRARLIASARQAFARLGYAKTSMDDLTAEAGLTRGALY
HHFGDKQGLLAAVVEQIDSEMDERLEAISAAASDPWQGFAQRCRAYLEMA
QEAEIRRIVLQDARAVLGQRQPAEEHCIDSLSRRLQALVEAGLITPAPSQ
ALARLINGSLVDAALWIAAAEQPGQRLQQALQALELLLRGLQPPR
>PFL_2488 transcriptional regulator, LysR family
MFDWNDLRFFLELQRSGRLLTAARRLNTTHATVARHIEAVEKALGTALFV
QHAQGYELTPAGEALLKHAEAMENVALLVQEEITQSSAPLGKIRVGVTEG
LGVKFLASRMVGLFERYPGLEVELVAVPRFVSILNREAEISIHLERPSAD
MLVTRKLTDYRLALYASQAYLDRAPPLRSREDLGRHAWIGYVDDLLFSQE
LMFLNSFCRNPQVVFHSTSVIAQQEAARSGLGIAVLPCYMAAADPQLVPL
LPAESIQRAYWISTRRELHKSVRLRVVWDYLVEQCAAQQQVLLGPEI
>PFL_3214 transcriptional regulator, AraC family
MLASHSFSSWVGALQGVCGRFDARPARNPALFIGEVGMQDYAGLEVAQIR
TNAGLISRQSTKVDHEDDRHCFLIIQRSGHARLSQGGESVELAPGDMALL
DSAGACEIVPHGLIEHASFHLCREDVYRHLPAQQRKFGKLSQNCASGRLM
RLLVEQICAGELQGCAAQQEGQALQEALIALLGPTLRQTVNSLDGFDEGL
HGGCLRDQARQLISQSLNEPGLTPVSLAGQLNISVRQLYRLFEEQGDSVC
RFIQRSRLKRSAADLSNPHLRNESITDIAFKWGFTDSAHFSRTFKKHFEQ
SPRDFRARSLNA
>PFL_1558 transcriptional regulator, AraC family
MSAAYHSLHEYTLRMSRVLEHIDQHLDQPLELADLARVAHFSPYHFHRLF
SAWVGEPLGAYLRRRRLACGAYLMASRPSASVLEIALEVGFGSGEAFSRA
FKQHFSVSPSTWRDTEPKRWHRRLDDIRERRLRELRNPDQTHIPAFDDPD
AFIHLKETAMKVTLQQLPATRVAYLRYIGAYGPGIGVFWRETAAPWMLEH
QLFNRVRYGIGHDDPDLTPADKCRYDACVEVPEDFKASAPAVVTTLPGGL
YAVAHYRGLGPAIADAWIELCRDWLPKSGLQFDPRPAFERYPADAFYDVK
TGELECEICIPVKKL
>PFL_4591 transcriptional regulator, LysR family
MNLMHWRLLVAIAECATITRAAEQVGMTQSGASQALAQMEDMLGVQLFVR
ESRQALPTAIGLQVLAQARVMLEALAEVRRQVDAARGIPQGSVRLAGFPM
VLATFLPPLLRRFKQLYPGIEVVQLEVSDDEVETLLEAQLVDLGVVLNPA
PERRSWLLGRDSWVAVLPEDHPWQASTIDLETLLAQPFVLATGGCSVNAR
SLAAEAGIPLADVRVEVREWNSAFSLVRERLGVTLVPQSTLPVQREGLRV
LELSTGVEREFALVAAPGRESSVLVQAFLSTLEEF
>PFL_0984 RNA polymerase sigma-70 family protein
MSHTATVEGLYQAHHSWLNTWLRRRLGCPHSAADLAQDTFIRVLSARETP
ALIEPRAFLTTIAKRVLFNHYRRQDLERAYQETLAQMPEQVAPSEEERAI
ILQTLMELDSLLDGLPRPVKRAFLLCQLDGLTYGEIARELNISIATVKRH
LNKAAMRCYFAL
>PFL_4112 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein
MRRTRYKTIVDHFAQRIRAGQLCPGTQLPTVRALMASEQVALATALRVYH
ELEAIGLVVGEPGRGTFVRDTSLPRGMGLEQHPASAASVDLAFNYPSLPG
QAESLREGLRAIAASGDLDALLHSAPQGGRPHERQTAARHLRNREIRVAA
EQVLIVNGAQQGLAVSLLALLQPGDILAVDALTYPGLKTLAQVHRLDLEA
LPQHNDQMDLDALQALCRRRPVRALYCMPTLHNPLGTVMPLAERRRLAQL
AREHDLLLIEDGAYAFLAEPAPPPLQTLAPERTLYISGLSKSVASGLRLG
FIVAPLEMIPALERAIRVSTWSTPSLTVTLGCRWIESGLVDSLEEQKRND
ARSRQQLARRVLKGCDYQAYGSSYFLWLKLPEGRRADAVVAALEHQGVTV
TSAEPFATTAHVPQALRLALGSIGLPLLEQALEKVRNEITR
>PFL_3111 transcriptional regulator, LysR family
MQDLNDLYYFAKVVEAGGFAAAGRLLGIPKSRLSRRIAELEERLNARLLQ
RTTRQLSLTAVGERYLRHCQAMLLEAEMADEAVASMASEPRGRLRVSSPV
GLAHELLTPLVSSFLEKYPQVQLEMLLLNRRVDLINEGVDVALRVRELGD
EDPLLVTRRLRRAQTAIVATPDFLRQYPVEHPEDLRRVPILGALEADRLV
HLRLLDQQGQACDLALEARLGIDDFIVRRACALAGQGCTVLPMLYCEEEL
ASGQLVQMLPQWSLPGGWLQAVYPHRRGVMPAVRAWIEHLSESFERCGER
LL
>PFL_4031 DNA-binding protein
MNNQLRELRTRQGWSQAELATRLEVSRQTVNAIETGRYDPSLPLAFKIAR
AFEMPIESIFSPDED
>PFL_1376 transcriptional regulator, LysR family
MKIDDLNAFVAVIRCQTISQAADALQLTQPAITRRVQNFEEALGVELLDR
NTKPLKPTSMGLRVYGQCLEVLRSIDALNELVANDGAPSGALRIGVPQTI
GDVVLLDALSQLKALYPQLQTSVATGWGSHLLSKVENGELDVVAALFPAG
KVFPEGVVGRSLGSMNLVVVAAKGEVRKRSCKLADCYQRGWVLNPDGCGF
RAGLQRALSAQGLSLQINLETFGTELQLGLIANGLGYGLVPLPLLENSSH
RDKLEIVPVSDFKPVIDLWLVHPRFLGNLQEPVSMFGEMVAARVGKAAP
>PFL_4386 transcriptional regulator, GntR family
MRIDATKAVTAIGQVLQEQIAHGLLAPGSKLPAERKLSELFATTRITVRE
ALLQLEAQGQIYREERRGWFVSPPRLAYNLMQRSHFHAMVSAQGRVPSTE
VISARLQPASAAVCAWLQLPALSSVIQICRARRIDERLVLYVEHYLNPKY
FPKILDLDLNQSITELYARHYDLHYGRVRFEIVPTSLQPEAAAALKVSVG
SPGLRIARVNYDQHERLIDCDLEFWRHDAIHVGVDVL
>PFL_2510 transcriptional regulator, LysR family
MVESLPPLYALRAFEVAARSSSFTRAAEELSLTQSAISRHIRTLESQFGC
RLFERHGPRLVLTDVGQRLARELKAGFRIIEDACLPLRSGSGQLRLKAPS
TLTMRWLLRALDQLKHQQPSLAVQLASVWMDFDHVDFHAEPYDCAILLGN
GQFGAGVEACKLFDEWLIPIGPPEAVDAPPWTLERLREAPLIHPSADRRD
WRRWLQAQGLLGQVRLDRGNVFDTLDQAICAAMRGHGLSIADLYLVAEDI
RQGLVSLPFPRALASGDGYYLVWLRDSPRREQIDGLRAFLLEQVVSIDDL
ELADLTPGAGSWRGRLNGAA
>PFL_1071 ribonuclease III
MSRLERQLGYSFKDQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEA
LFERFPQAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGG
FRRESILADALEALIGAIYLDAGMETARDRVLSWLASEFESLTLVDTNKD
PKTRLQEFLQSRACELPRYEVVDIQGEPHCRTFFVECEVTLLNEKSRGQG
VSRRIAEQVAAAAALIALGVENGHD
>PFL_4259 transcriptional regulator, LysR family
MSQFPSIDTEVLRTFVAIADEGGFTRAGERVNRTQSAVSMQMKRLEEDVL
QRQLFQRDGRQVKLTAEGQVLLGYARRILKLHSEVFNTLREPHMVGLVRI
GTPDDYVMRFLPGILSRFAQSYPLIQIEVHCESSKQLLQRQDLDLTIVTR
EPGNEIGQLLRKERFVWAVAQCFTPHEQTPLPLAMFNSDCFCRLWACNAL
DAIGLDYRIAYNSSSLSAIMAVVSAGLAITAQLESLITPDLRILGENEGL
PELPEASIMLLRNLNQPSPITECLAEHIVEGFKL
>PFL_5016 acetyltransferase, GNAT family
MHLSRALALEYAETQYLRARVQGLASLPGNPYRACLYGEPGCGAFVVGGN
PSPMMNRVHGDRAQDARRLVDLLQSCVAYAPAIALIAESAKVVPTLELQG
LPLQRLKGWTHGQLFAPVGEIVAPPSVLDIEPVTASTLEVFCTLHREGFN
TPAAARPATQAAFGGLLNDGRGHLYLLREQGVAVAGAALFIADNGVAYLG
TAFTTRAARGLGYHRALIAHRLQQAAALGARSVAATALVNSQSRRNLEHC
GLRLSHLQTLYRAVP
>PFL_5931 transcriptional regulator, TetR family
MTRTAPLRKPRARSQARIDSILDAARTLLAAEGVASLSIYSVADKAQIPP
SSVYHFFASVPALLEALTADVHAAFRACLLEPIDHERLSSWRDLSRLVEQ
RMLDIYGEDAAARQLILAQHGLTEVTQADRQHDIELGDLMHKLFDHHFEL
PTLPVDVDVFALAMELGDRVYARSVQQHGQITPRMAEEGMRVFDAYLGLY
LPPYLAKRPTPP
>PFL_5518 N utilization substance protein B
MISDDSDRFNPRDPKPANAGKPSKSAKRREARQLATQALYQWHMAKHSLN
EIEAQFRVDNDFTDIDGAYFREILHGVPANKNEIDTALVPCLDLAIDELD
PVELAVLRLSTWELLKRVDVPYRVVINEGIELAKVFGSTDGHKFVNGVLD
KLAPRLREAEVKAFKR
>PFL_2137 transcriptional regulator, LysR family
MLELRRLRYFVTVADELHFGRAALRLRIAQPPLTRHIAALEARLGIRLFE
RSTRTVCLTPEGELFLQQARGVISAVGEAEATARKIAHGAIGRIVIGYAS
SIPLSNAFSEMIRNTSRSLPEVELAFREVSTASQRQQLIDGSLDIGFGWG
APNLPAHGLQSLVSSRDSLVVAVPSRSAFAGRSSLGFCELAGESFVTFPS
AYGSALNTALEDLCAHSGIIPRLGPTASQMTTLVSLVAAERGVAVVPDYT
ATLQRPGVVYVPLAEPYVLEQTVSWRTPLGSRCLERFVELARTLAAPLPA
PAAGPEWRLRG
>PFL_3574 sigma-54 dependent transcriptional regulator
MNDSESLKDYQRVRQLAIRSLFEIIEQSSEGTVIVDRDANIVWMNERYAR
RFGLESAAFAIGKPCESVIPGSLLREVVRTGRPILLDMQDTPKEPLVVMR
LPIHDDAGTVIGAIGFALFDELRSLSPMLKRYLSMQEELASTRSLLRARQ
TKYNFAHFIGTSAASLEVKRRARRGASAESPILLQGETGTGKELLAQAIH
AASPRAHKPFVSINSAAIPEALLEAEFFGTAPGAFTGADRKGRPGKLQIA
QGGSLFLDEIGDMPLPLQSKLLRVLQEKEFEPVGSNEVIHSDVRIIAATS
TDLEAAIKRGEFRADLYYRLNVLPIQVPALRERLDDLPALSEGILEELRS
QHELDRDALALLAQHAWPGNIRELRNVLERAALLSDDLILNASDIRAAIG
SFSPVQRNEALVPGDSPNQETFAAARERFDRQLIGATLAQCAGKVDEAAR
RLGLGRSTLYKKMAALGIVESQ
>PFL_1884 transcriptional regulator, LysR family
MSGRTLRIHSSAIHYFDMVRRCRSIREAARRLNVASSAVNRQILKIEDEI
GAPLFERLPGGLRLTMAGEILSRHANLVLQDLERVRLEFDALRGLKSGHV
EIATAEGATVDLLPSVLKRMRDHYPQVTIGVTVQGSQSIPQALINSRADL
GLAFAVPRAAEIRQLSVGHFRLGALVGPDHPLAERGSVNFATCAEHGLIL
AKSELSIHHLLAPLHKRLGLLDKPPLQSNSMELARQMARHNMGVAFQTRV
GVEVDLQKGELLHIPLSDQGGIYSDLGLYARSGRDLPSAVEALAHLLSEE
IALRERAERAFGQPVL
>PFL_1860 transcriptional regulator, GntR family
MLDQLEHPMQAQDDSETLSENVFRRIQAAIVKGEIAPGSKISEPELARTY
GISRGPLREAIHRLEGQRLLVRVPHVGARVVSLSHAELIELYEIRESLEG
MACRLAAERMTTEEIDELRRVLDTHERDAAFQAGVGYYQQEGDFDFHYRI
IQGAGNRTLTQMLCGELYQLVRMYRIQFSATPNRPHQAFAEHHRILDAIA
DRDGELAELLMRRHIGASKRNIARHYQDSAHQTATPRGES
>PFL_0595 transcriptional regulator, LysR family
MLNKRYLPSITALQCFEAVTRHLSFTRAAEELNLTQSAVSKQVAQLEELL
QHLLFRRVRRRLQLTPAGDLYLVEVRKILTQVEMSTHYLRSYGGETEVLR
VSTPYTFGARWLVPRLKGWRLRHPHIHLDLCNEQEPDELLQGHADLAFYF
GQGSRPGTESLKLFSEELVAVCAPDSLPAEPLTDPRQLTELVLLQNASRP
QGWHEWFDQQGYQTEHSYHGPRFETFYMCIRAAQVGCGVALLPRFLVEEE
LAEGKLVIAWEYAMPSQDAYYLAYPEHSAEVPKVRDFVRWMLEHNDSPLS
>PFL_4818 transcriptional regulator, AraC family
MNKPALASIPVFKLYGESLDWPTPDLLHCEPISQRSREHHWEIKPHRHAD
LCQLLFVYRGQAELEIEGQRTLLDKSMVQVLPPLSVHGFRFSEDIEGYVV
TLAAPLVSHLQTQLGQGQNTLARPEGYPTGADEAYLNGLFAALQQEYQGQ
QPAREMLMHALVSMIVVWVGRQALQRSSASRRPQRAREYFNGFIQLVEAH
YREHVKVEDLAHKLGISVSHLNGTCRELAGQPALQIMHERQLLEAKRLLT
YTGMTIYEISADLGFSDPTNFTRLFRRREGISPKVFRDRLKADQAGDADS
LTLT
>PFL_5669 transcriptional regulator, AsnC family
MLEPTLSDSRPPVLDEVDRQLIAALQINARESVAMLARQLGIARTTVTSR
LARLEKTRVITGYGVRLGQRVVDGGLQAYVGIKVQPRSGKEVLRRLSGMA
QVQQLCAVSGEFDYVAWLRTDSPEQLDQLLDQIGSVDGVEKTTTSIILSS
KIDRGHAL
>PFL_2545 transcriptional regulator, TetR family
MGNHKIEIRRSNVEKILLGAEKIFAEKGYAGTAMADIAEEVQLPRSNLHY
YFSTKNELYSAVLLDLLDVWKQDALCFEMFDDPRVVLSSYIRAKMQHSRS
RPYGSKVWANEIMHGAPTLGETLDASLYDWAKMKEAKIRQWVEDGRILPV
EPSSLLYMIWASTQHYADFDHQVMILNDHQPLSDLQFERAVQTVTSVILR
GIGLEP
>PFL_2362 transcriptional regulator, AsnC family
MRDLDVKDREILDILSKEARIALKALAARIGLSRSATSERVLNLERNGVI
RGYRADIGEIDANVIRAMFLVCLKRTPAISLLDMLAQHSQVRRISSVSGQ
LDLVIEIESRTIDDLNRVRDAVASHESVEDITTAVVLRRDIDRQTS
>PFL_0795 acetyltransferase, GNAT family
MQYQVRPAVPADAPQVSQVILAALLASNAQDYPATVIERVQASFTPDAVR
QLMQRRQMFVALVHGELRGTASLDGRAVRSVFVDPAYHGQGLGRQLMAAV
EQAALDSGQTSLVVPSSVTAEGFYARLGFVRVREHYEGEELTLIMERALV
ATETGPGLG
>PFL_5811 malonate utilization transcriptional regulator
MLIDEELTLKKLEVFLAFMRTGNLARAAAELQTSNVSVHRAIHSLENALR
CPLFKHEGRNLTPLESAFVLEERAQKLVQDVVESVRLTREAAGFSAERFK
LGALYSLTVKTVPQLIMGLKLRRSELNIDLILGSNIDLLYKLKDMEVDAI
LISLDDSAHDPDCEQLPLFSDDIFLATPADSPFAQQSEVDLADVRDATFI
TLTQGFATHQDGVRVFKQAGFEPKVAMQVNDIFTLLSMVSSGVGYALLPG
RIAAVYENRVKLIPLQARYRLQQHIGVVFLKAKERDPNLLALLAECRMYA
NRQTP
>PFL_4251 ATP-dependent RNA helicase, DEAD box family
MTQEIGGFAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQA
QTGTGKTAAFALPILHRIDPSKREPQALILAPTRELALQVATAFETYAKQ
MPGVTVVAVYGGAPMGPQLKAIRNGAQIVVATPGRLCDHLRRDEKVLATV
NHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFSATLPQSIRAIAER
HLKDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLLEVEDFDALIM
FVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVT
PRERRMLQVIERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAEA
THGDLLDRLTADIGCSPRALAAALLRKATNGQALNLAAIEKERPLVPNSA
PRGDRPERSGDRPDRGDRERRAPMPLGEGRARCRTALGARDGIAAKNLLG
AILNEGGLAREAIGRIQVRDSFSLVELPEDGLDRLLTKLKDTRVAGKQLK
LRRYRED
>PFL_0323 transcriptional regulator, AraC family
MTHATPSIKLSTLQQIAPYLSMRGVSPLEFFRRYGISPQVFQYPDAWVPR
ATCFHIANEMAAVAQDPFAGATVGHLIEVRSLGAWGGLILGSTNLAQACA
VAAIHTDLLHQGSDVRIVTEGRTTKLIQQFTGQHGADPKQVILGTLALLR
KVPLMSGEPCAIRVHLQNPRERGDEALEEYLGPNLHMNAKHNMIEFDREL
LDTPLQPARDDAWKVTEALKSTAQAAGVLIERIADQDRSKLTAISRNIGL
SSRTLQRRLKYCGIDFEDLRDETRRSEALQLIASGKYTATEIAYMVGYSD
QAHFTRAFKRWTGSSPSRYRSLLKDDR
>PFL_2250 transcriptional regulator, AraC family
MHNHPGLVAILAYDGLCTFEFGIAVEIFGLARPEFDFPWYRQTIAAVDPG
PMRALGGIQVLADGGLELLEQARTIIIPGWRSREQAPPPKLLEALRQAHQ
RGARLLSICSGVFVLAATGLLDGCSATTHWRYARELAEGFPNIRVDPDVL
YVDAGQLITSAGSAAGIDACLHLVARDFGTQVANSVARRLVMSPQRTGGQ
AQFIPAPVSRTPRSDLSRVMQWARERLHQPLSVSELAARALMSERTFLRR
FHDATGASPKAWLQHERLARARELLESGSESTESIALRCGYRSVESFRVA
FRGLVGVPPSVYRERFGRGLETTTPPRPS
>PFL_3213 transcriptional regulator, LuxR family
MGLHAGLGRTLTLIGNPRFWKQLILLLHQATPFDNALAIFYPLDGPPRAL
EEYDAEPSSKPASMLTYLNGLYLLDPFFQACREGYPSGLYRLEEVAPDHF
RQSEYFLSYFHDNVLEDEVQLILQLPEAGTLSLSLGSQCVFSHDEIGLLT
TFSAWVLPLMEQHWQHSQARPQSPAPQEMASQIRDALSHFGSAVLSEREL
EIARLILRGFSSKAMAERLKISPDTIKVHRRHLYAKLDISSQPELFSLFI
QSLGHDLENP
>PFL_0802 transcriptional regulator, LysR family
MSIKISNLQFFVAVATSQSLTQAAQRLHRTPAAVSLSLKQLEEELGGALF
EGERKNQLSPLGRFVLLEAQRELAHFDRTISTIKTYAKAETGLVRVAAVP
SFAITLLPPLLKQFHEQHPQFHLDIRDMDSERVVQAVLSGDVDIGIGTVP
ASIPNIDQDFLFSDAFCVVCASDNPLNRLARPLRWSDLDGQNFINSGLGA
EINAAEFRHIRDHSTLSVRNTTSLLALVAQGMGVTLLPELLSRSAAGDQL
NFLRLEDQRIVRSVSVITAPRETLNHASYTFLKALKGSRFA
>PFL_3687 transcriptional regulator, LysR family
MKLNVQRLDLNLLRVFDALMQEQNLSRAAVRLNLSQPAVSNALARLRRHL
DEPLFIRTARGMQPTSRALSLHVAVRQALHLLQQGLDPAAAFEPAAAQQL
FTLSMNDYAQARLLPALSRRLQQVAPGVRLAVRSDSADAIAAWLGAGMLD
LAVDYLYFDSPDLCYQPLLEEQLVVIGRRDHPAFAPELSLEAYQACLHVA
IPDRGGRGSPLEIVLGSAKVQRQVQVFVPNYLSIPLIVAQSDLLGTVPRY
LAEHFCALLPIRIASLPLLAAPVQVSLIWHRQQQQAPGLQWLRREIAAIA
SAP
>PFL_2447 transcriptional regulator, TetR family
MPAPARQERRSRLRHRQLILDAARNEFAAKGFSACQTLDIALRAGVPKAN
LYYYFHTKENLYAEVLQPLLEPLHQASRLLHPEADPAQALQAYIEARMQI
VEDFPLRSKILCSELLHGAQQLPEAWRESLEAQNRSEIACLRNWAERGLI
RAIAPEHLLLFIGAATQTYPTLGWQIALMSGVAQPSSRDFQSVAATLTRM
VLAGALPALASAQGLPARALAI
>PFL_5114 transcriptional regulator, LuxR family
MTDLSPLQRPASAVIPALEGRFYRPPLPDGYVQRPRLCERLSAGLKGRLL
LVCAPAGFGKSSLAVEFCQGLPDNWQSLWLGLSRRDSDPGRFLERLLAGL
QQYFPQLGRQSLGLLKMRQRHQPFAFEEWLDGLLDELAVQLTGASPLLLV
LDDYHLAQGPVLDRCLQFFLNHLPDGLLVLVTSRQRPDWHLARLRLSRQL
LELHEQDLRLTHDESLSLLDRHSSSLRGEALENLIQRSEGWVAGLRFWLL
AASEAGAGGALPQGLHGGEGLIRDYLLEEVIDCLPAEVQSFLYDTAPQER
FCAELCDALREAHDSAEILGFLQAHQVFLVPLDEHGHWYRYHHLFSDLLR
TRPTANALVPAASLHLRACRWFNAQGLLDEAVEQALRAGHLDVAANLVQN
LSEEQLLAEQNVGMLLRWKMDLPDSLLISTPRLIVLYSWALGLACQLDAA
EELANHLSRFLPAPSATAQKSMLAQWLALSGIIARGRGQRENTLAYCSEA
LESLPPKRYGQRLMCLSTLSNLAITDADLWRARSLNRESLELAQRVGNPL
FEALAHYDRARVLQARGEVLRAQEEVHQGLRRLQGLSAQRLYAVRARLTL
YDGYLLTLRAQPEAGLLRLQAGLVEARACRDISVLIGHCVIAKQEGLGGE
FSRAFAELAEAERLMHIWDVPPIYYLAMITLVKCELWLAQGRTDLAEAWL
ARLGQTYTGEQAAAPPEFHPQLPLHIELQQAQLESIKGDLGRAEQRLNRL
VEHGQQSGRQLLSVMALTQKAALLLAAGRGPQARQDLAQALEAGVGGAMQ
PFMALLHGHPGWMREQLQQGVSTALTQALLERLPAASREPQEIAAHNESL
SSRELSVLQLIAQGCSNQEISERLFISLHTVKTHASHINSKLGVERRTQA
VARAQELGLLG
>PFL_3599 transcriptional regulator, LysR family
MEIRHFRYFLAVARQRNFTRAAEQLGIAPPTLSRQIQDMENTLGTRLFLR
QQREVSLTEAGATLLLEAEATVRQFEFAQRNAQRAGRGEIGHIELGYVAS
AVYCGLLQKQVQGFGRDCPDVSLNVRECPMATLPARIADGRLDVGYIRSP
MTLPEGVEAIRLDAEGFVLALSDESWLCRLPQIASEHLLNETFILPEQIS
GTLQVAAQGAYAPKLGPQPGGLVAVLALVSLGQGVAVVPESVVGHISLPH
VLYRPIGGSSATSWLSLIHRRFEQAPAVVRYIEQVRREYRGKA
>PFL_4584 pyoverdine synthetase, putative
MSMGIANLEAELGYALFDRSHREPLPTPLALSLAPHARLIADQLKQLQVH
AVELSLGLESKLSIAVVDDIDKQRVLAAIKLIAERYPLLEVELLSAPQDD
VLHLLHSGRVSVGVAFAGLSVNALEYFQYLGCERMIACICAGHPVFQASD
GSLYLEELIKVRQVVVASRDLPLSDTRPLVGESLWRTDSLAMALHMVEAG
IGWGNFPLSVIQPLLAAGRLQRLHFKNIDNGLVLPVHAVWLKNQPLQKGA
LALVQLLSGEDPALGAVAPPA
>PFL_4560 transcriptional regulator, LysR family
MDVRHLKAFLAVFEERNITAAAQRLCISQPTLSVTIKQLEDELGAQLFLR
QPRGVEVSEQARVLYPQARRMVAEAESLSRLFRQDESRLALELGVEGDIA
DSQVSAFVRMAQQALPNLLLTLQEGCVGDARLAVEELCCEDELFLPLWEE
PYVLAVPVGHRLLEQEQPQPRVEDWVTCPEHASHQRLMALYGGAVQAQAG
HAGSLKQALNMVAAGLGVAMLPLSLVQGREGVESRALHLPAPSRRIGLCY
AVQALESATLRTLHDYLRTLRPIG
>PFL_5854 transcription initiation factor sigma 32
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLEA
ARQMVLAHLRFVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGV
RLVSFAVHWIKAEIHEFILRNWRIVKVATTKAQRKLFFNLRSQKKRLAWL
NNEEVHRVAESLGVEPREVREMESRLTGQDMAFDPAAEADDDSAFQSPAN
YLEDHRYDPALQLEDADWSDNSTSNLHEALEVLDERSRDILYQRWLAEEK
ATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
>PFL_2281 transcriptional regulator, IclR family
MSDNNNSLFNQSLEKGLAVLRAFNAAQRTMNLAEIATAADINKSSAQRMI
HTLEQLGYVRKHPQTKRFQLTPRVMEIGYNYLAADTLVDVANPFLAELAQ
VTGETTNLTEPDGLDMVYVARFVAPKFIPIHMPIGSRIPMYCTGSGRAYL
SALPAAEALQILQASDRKAHTRHTRTDLDEIQREIDATQRRGYALNPEEL
FLGDMAIAAPILDGKGLPVAAVHVVVPSSRWTLEEAERKLAPSVIECARA
IRTSIRTL
>PFL_2374 acetyltransferase, GNAT family
MAGTCLGRDQPFWLAIEDGQPLGMIGAAVSEANRYNLIGMWVAPAARGSG
VAARLVEAVKSRAREQGHERVFLDVSPANARAASFYLRQGFAFIDEWEPL
QSHPHIQVQTMLWTVQG
>PFL_2371 transcriptional regulator, LysR family
MISDPGTPTLDQLRVFLTVVEVGSFAGAARKLHRATSVISYSIANLEMQL
GVSLFDRQSTRKPQLTEAGRTVLVEARTIANGVHGLRAKVRGLLQGLEAE
VHLVLDVMLAPERVVDALKAFREVFPTVALHLHMEALGAVTERVIERGAV
VGISGPMNESIDGIERIGVGSVELIPVAAPDHPLAASDANLTGAGREFIQ
LVLSDRSTLTRGRDFAVLSNRTWRLADLGAKHMLLRAGIGWGNMPRPMVE
EDLRSGRLVRLNLPEYQSGIYPFDAIYRSDTPPGPAARWLIERFLQQVST
PPAIQPQA
>PFL_5772 ATP-independent RNA helicase DbpA
MTTIATAFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQA
KTGSGKTAAFGIGLLNPINPRYFGCQALVICPTRELADQVAKEVRRLARA
EDNIKVLTLCGGVSFGPQIASLEHGAHIIVGTPGRIQQHLRKGSLVLDGL
NTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTLLFSATYPVGIKQLASK
FMRDPQTVKAEAFHDDTQIEQRFYEISPEERMSAVTKVLHHFRPASCVAF
CFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAP
SEAHRAQAIEQLQKAPLNWDQVDNLKSQGGAPLQPPMSTLCIAGGRKDKV
RPGDILGALTGDAGIPGAQVGKIAIFDFQSYVAVERTVVMQALQRLNNGK
IKGRSLRVRVL
>PFL_4070 transcriptional regulator, AraC family
MAWLEPQALFDPDRFDAPLLGIAATLGDHDSGLHRHRRGQLLYTRQGCTR
ITLDHRLCLLPPSRAAWIPPGVTHRAQMQQSVDYRSLYFSAELSQRLPAE
VAVIEVSPLLQAVLEPMAQAAFDCDWSQGRYPHLLGLCIEEIRQALHQPL
SLPLPRDKRLQPLLANLEQLPPQLQVLATQVGASSRTIGRIFQRETGLSY
QQWRQQWRLMRAIELLATGRGIGYSACALGFASDSIFIAFFKAMTGTTPR
AYFK
>PFL_1407 acetyltransferase, GNAT family family
MSASTGASVIDLYHQAQDYFFVSISQFYRRFGSGLSAYCTGVEASSLNLL
MMNVCAVDEPGALAEGVAFLQRTGMPFCVVVPEALVPRVSGQLHQQHLLA
ADKTTCMVLDLTRHEPRQALAAQAQVRCSDLRLEDWAQPVQSAFESGEGG
IEQYLARHRAALSAGRALSHFTLYVEERPVSALTLSLLPGLARLDDIGTV
QDCQGQGYATALIQAVLAFARARGARTCVLEASLDGLSIYRKAGFEALFD
YRTFCQE
>PFL_3433 conserved hypothetical protein
MQRKSLIEAECPIARGLERVGEWWSILIMRDALHGLRRFDEFARSLEIAP
NMLTRRLNSLVEDGLLVREAYSQRPLRYQYVPTAKGEDFRVVLMAFVAWG
NRHYAPEGESVQLVERETGLAVQPVMAEVASGRLVALQACTVQAGPAASA
SMRQRLGATAD
>PFL_3269 DNA-binding response regulator
MPNILLVEDDTALSELIASYLERNGYQVSVISRGDQVRERAKASPPDLVI
LDLMLPGLDGLQVCRLLRADSATLPILMLTARDDSHDQVLGLEMGADDYV
TKPCEPRVLLARVRTLLRRSSLSEPQSASDQILMGNLCIDLSERTVTWRE
QLVELSSGEYNLLVVLARHAGEVLSRDQILQRLRGIEFNGTDRSVDVAIS
KLRRKFDDHAGEARKIKTVWGKGYLFSRSEWEC
>PFL_2165 transcriptional regulator, TetR family
MAERCSRFAESRDKALELFASKGFGQVGMRELASHLGLTPGSLYHHYPSK
QHLLLDLIEEFFDELHSTLKRLQRRKLQGDCLPALIRAHLKLHRELPRHF
RLVERDSGCLNPDQQLRVGQLRERYEQQLVQLLGTPTGLGPQAQRAAAHA
LANLLNSAPSWFSEQPLAEREREALLENLLSGAIERLLGGVPVRSAVA
>PFL_1470 transcriptional regulator, IclR family
MRRFRDNIFPLFPRIRCVVNRHCARHQPLPEAPMQDPNDSPEQAPKDRKF
VEALARGLEVLRAFTHGHAVRGNQDIARITGLPKPTVSRLTYTLTQLGYL
KYNQDLEKYQLDSAVLALGYAYSASLRVRQLGKPFMDEFSRRTNTTVSLT
CRDRLSMIHVDSSRPPEVASLRMEPGLRLPLATSAAGRAYLAATPKIERD
HLLGEVAKKLGDEWPALEKSLEDSFREYEEFGFCLSLGEWDRNVNGAGVP
LRLADGSIMALTCGAPSFQLSSEKLESSLAHQLVMLARDLESLGV
>PFL_3639 transcriptional regulator, AsnC family
MKKTTRSVNLDDTDLAILALLQQDASISNAELSERLSLSLTPCWRRRKRL
EEEGVIRDYQANLDRRLLGLDILAFVHVRFATHSDQTPDDFETVIMRLPE
VQACHKITGDADYLLQVLARDLDSYSDFVEHVLRRQPGIASIQSSLALRE
VKATSRLAIPQPLPR
>PFL_0167 DNA-binding protein, putative
MAENITGFAERLRSLRKQKNLSQTELGQLAELHYTHIGRYERGTSRPSGD
TLKRLADALDVSSDYLLEGASDDAAKAKFEDRELLRQFQEVEQIPEEDKK
VVKTLLDAFLIKKHLQTLTR
>PFL_2721 transcriptional regulator, LacI family
MNQFSAAQRSRVTMLDVARRAGVSKASVSRFIGEDRALLSDAIALRIDQA
ISELGYRPNQMARGLKRGRTRLIGMLVADIRNPYSIAVMHGVETACRQHG
YSLVVCNTDRDDEQEARHLANLRAYNIEGLIVNTLGHHLEQLQQLQEEMP
MVLVDRKLSQLQADLVGLDNPAAVRSALDHLQQQGYRDLLLVSEPHDGTS
SRLERSASFQAEIERRPALRGQLLETGSHLTSQLQAFLAAPGPGPKALFC
ANGVATLAATRALRELECPLFEGVGLIALDDLDWYPLVGNGITALAQPTE
AIGTSAFECLLKRLRGEDAPARVVDFPAQLIVRGSTRL
>PFL_4046 transcriptional regulator, AraC family
MPVLNEQDQPQDPDAIARPVCALRISTQEQRWERPWHSHRKAQLLFPLSG
VLSCESAEGLWLAPPQCAVWIPSATDHRVQGLENALGYCLFVEPEHARSL
PQACCTLAVSPLLQELLQRCAQLPYLYDQQGAEGRLMAVALDELAAAPRE
QIHLPMPRHEQLRRLAGQILEQPERRLSLGQWAEQIGLSERSLSRLIVAE
TGLSFGRWQRQLHILLGLKQLGRGDSVERVALTLGYDSASAFIRMFKKAV
GQPPGRFFAERRQALEHDLPL
>PFL_3959 protein kinase domain protein
MLTLFMDTLAQLRAGQLAGIKRLDLSCGLTEFPREIFDLADSLEILNLSG
NALSSLPEDLHRLTRLRILFCSDNRFSEVPACLGQCLQLSMIGFKANRIE
RVPAAALPPQLRWLILTDNRIAELPEELGQRPLLQKLMLAGNRLTRLPES
LGQCHRLELLRIAANRLTELPPFLLALPRLTWLAYAGNPLESEADATALA
STPSIPWSELTLEQRLGEGASGVIHQAQWQPAGQPPRAVAVKLYKGEMTS
DGSPLHEMNACISAGLHPNLIRVEGRILDHPQGQNGLVMQLIDKSFANLA
ALPSLDSCSRDIYPDDARFNADVTLGIARGIASVGAHLHAQGITHGDLYG
HNTLWNAQGDCLLGDFGAASFHAQDDTVQSRALQRLEVRAFGILLEELLE
RGDGSLSLEQRQKLAALVQRCCQPEVLARPGFTQVCEELAGL
>PFL_0999 transcriptional regulator, AraC family
MHALDTLQVFQALNRSPNARLEHSAELGDGLSAALWSNHHDAQEYEAPSH
HTLSCYLAGGTGTFRRDQPGSKGGPGKLCILPAEHQSAWVINGDIRLAHL
YFSPEQFALGCVTLLDREPRELQLRESTFLDDPEQTQRFAQLVRLNWDEP
GERLLTSSLAHEMLSHALLNQVGQRQGARLKGGLAAHQRRLLVDYIDSQL
DAPLSLGQLAGLCALSEYHFARMFRASFGLPPHQYLLARRLSRARHLLRT
TAQPLGEIALACGFASASHFSNRFRHALGGTPGDYRLAFLR
>PFL_0774 transcriptional regulator, putative
MDILYQIRSRLDFLSAGEGRIARLMLDDVGFAASASLDELARRAEVSAAT
LSRFARSVGCRDLRQLRLQLAQASGVGSRFLDPAGTPEQSGFYRQIVGDI
EAALHQHLAGFEEAQFADAVRLLGRARMIHAFGMGGCSTLCSSELQVRLV
RLGYPIAACHDPVMMRVTAAALGPQHAVIACSLTGITPELLEAVALARTY
GAGILAITLPDSPLAQLADVLLPLHSAETSFIYKPTAARYGMLLAIDVLA
TELALALPDDNQERLRRIKLALDHYRGGDDCLPLGD
>PFL_4566 acetyltransferase, GNAT family
MTTRLVPYEQLDSHQHARLLELEVLPGQKAFSGDIHGALYTLDNAPRGAI
RGFALLSEEWPVAFLLLKRPPCLPAWADADSASLHALQVDRRHQGRGFGQ
ACLQAVPEAARQAWPELKGLTLAVDSDNQPALRLYRKLGWVENGEACKGR
IGYERRMALAF
>PFL_5210 transcriptional regulator, LysR family
MDKLEQYRVFIQVADMGSFIKAAHALELPRATVSSAVQQLETGLGTRLLH
RTTRHVQLTADGAILLERARRLLADAAELNQLFHHRQIDVSGRLNIDVPS
RIARRLIVPALPRWLAQYPGLQLALGASDRNIDLVQEGIDCAIRVGSLAD
SSLVARPLGQLALINCASPAYLAEQGEPHTPQDLQNGQWMVGYASPDTGR
EQPWEYLLEGREHLLGLPSRVIVNNVENYIACCRQGLGLIQVPRFDVQHL
LDRGELVQVLRELPVAPMDICALYPDRRHRSRRLNVFIEWFAELIKPHLE
AC
>PFL_2966 transcriptional regulator, TetR family
MTKHSPRSRDAYHVGNLAPQLLKAARHMLEQVGPTKLSLRAVSERVGVSA
TAAYHHYANRAELIGHLAAQGFRELAQELPTHGSENGLQALRNACLAYFS
FARANPALYQLMFGPEFADGQMPLELHGARDQAFSELRRIVAEVLELDME
QPEVRRAALAGWSYTHGLASLVIHRVLIFPAGTTDQCFVDSTLQGLLQLF
QVEKGT
>PFL_3483 RNA polymerase sigma-70 factor, ECF subfamily
MVPNPSLQHAVGELYLQHHNWVVQLLRRKLGNQDQAMDLAQDTFVRILRS
ERLPVLREPRAYLNTVASRLCGQYFRRQALERAYLETLAQLEPQYQPSPE
TRLLVLEALDAVGQVLDGLGSRVREVFLLSQLEGLTYPQIAQRLQLSVNV
VQKAMLKAYRHCYAAVYPG
>PFL_1817 transcriptional regulator, AraC family
MLLTRHLDANATLVSLIQPLASRDGFVATALPGVQVLRASCDVARGPQIY
EPSLMIIAQGSKLAYLGTRTLEYGAGHYLIQALSVPFECETFALPDAPLL
GVSIAIDRAVLSELVLAMGVTEGRAASAQTLESMTSAVLDDAMRGCVERL
LRCLHDPLECKVMGPSRVRELLFAALRGPQADALRALVEQQGQFARVAAS
LNHLHEHYTEPLNVETLARCANMSTSTFHEHFKRSTLLSPVQYLKRLRLL
KAQQLLLGEGLGVAQVAHRVGYQSTSQFSREYKRYFERNPGEERAA
>PFL_2423 transcriptional regulator, AraC family
MHNPPMNDFTVLLLPGSFASSVALTLDMLSSAALLAPRLGLGAPRWRVCA
LQAGQVALGQGLLLEVEALDARDDDRSCWIVPGLGIDTPEAIAQRLLQAD
IAPLLDALRDHLELGGEVAASCSAVFLLQAAGLLPGRRVTTSWWLAPLLQ
EWAVDTKVDPDQMVVVDPPLTTAGAAFGQSDLMLHLLRSRFGTSLADAVG
QTLLIDRRQLQAPFRVPAMMAQGSTLISRLTAHIEAGLPNLPSVGELAAQ
FSMSERTLGRQIRKVTGHSSLRLIQNVQLNRARALLQSSKYSVERVAEQV
GYQDATALRRLMRKLLNATPRQLR
>PFL_5635 sensory box-containing sigma-54 dependent transcriptional regulator
MLTVESRVNFNDASFEELLNALHDGVYITDGQGQTLKVNQAYERLTGLNG
AELLGRPMQELVKSGVISQSASLRVLQDGRPVSVMQSLSHGKKLLVSATP
ILAADQSIRYVVSTVRDMTELLRIKRERDELQQLKQLRTSTARLHAGQRD
DLLQSPLMADQEVSGRVFAQARQVADCDVKVLLQGETGVGKTLVAQFIHN
ASARAREPFLALNCGALPENLIEAELFGYAPGAFTGAGSKGKRGLLELAH
NGTLFLDEIGDLPLAVQVKLLKVIEENRFIPVGGLELKEVDVRIISATHH
DLKQRVAEGKFRADLYYRLNVVPIAIPALRERSEEIGPLLEYYLEHFNQR
YQRQVQWSLEALELLGEYAWPGNIRELINVVERLVVTCSGQVIEALDLPE
DLIEQQARNTDDSRLPLRKVLENAERQAIRAALQLHKTTRLAAKALGVSQ
ATVVQKMKRWEHSD
>PFL_2955 DNA-binding response regulator, LuxR family
MSKSVLIVDDHPVVCEAIRKTLESQGYTIVGETADGISALNMILSLRPDI
VILDVSLEKMDGLTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGASG
FVSKNEPLTKLLKAVDTIVEGYVFFPKKSMPFSDGGRGKHSSDVLAALTN
RELEVLKLLAEGLTNLEIAEKLHLSNKTVSGHKINILSKLGVTSVVDLVN
IARQNELV
>PFL_2911 transcriptional regulator, LysR family
MLRNVTDMDLRLLRIFSVVVKCGGFTAAQAELNMSQSNISMHISSLEKRL
GYRLCERGKGGFRLTEKGQRILAAAQALFGAVEAFKSEAQELSGRLVGDL
YLGLADNIATLPAARIDAAIARFYRREHDLHLHVFINSPTELERAVIDGQ
LDLAISYFSRSLPTLDYQPLYAEEIALFCGASHPLFPVLEPELAHIKACD
WIKHGFLPASQVLPVTPQRASATAYHMEAVVHGVLAGTHLGYLPSHYAQP
WVAAGQMRVLHPETLRYEVQHSMITHAGHARGEALKAFIADLLAEHGG
>PFL_2637 transcriptional regulatory protein RstA, putative
MENLGLGKVLLVEDDEKLAGLIAHFLSQHGFEVLTVHRGDTALAAFLEFK
PKLVVLDLMLPGQSGLHVCREIRAVADTPIVILTAKEDDLDHILGLESGA
DDYVIKPIKPAVLLARLRALQRRQVPETTTLRGALAFGVLSIDRNSREVR
LAGEPVELTTMEFELLWLLASAPGKTLSRDDILNRMRGIEFDGLNRSVDV
YISKLRGKLKDNPREPVCIKTVWGKGYLFNPFAWEV
>PFL_1965 DNA-binding heavy metal response regulator
MKLLIVEDQPKTGHYLRQGLSEAGFNAELVADGSTGQHQALTGDYALLIL
DVMLPGRNGWQILQAVRSAGLEMPVLFLTARDAVQDRVHGLELGADDYLV
KPFAFSELLARVRSLLRRGSAVAQETSLQLADLRLDLIRRRVERGSQRID
LTAKEFALLEMLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRL
KIDDDFPNKLIHTVRGMGYVLEERQA
>PFL_3837 transcriptional regulator, LysR family
MEIRQLKYFVAVVDAGSLSRAAREVHVAQSALSKQMSALEADLGAQLFHR
SNSGIRVNDAGKLFYEYAQGLLKHLQDARAAISSEPGALSGSIVVALPQS
VASTVALPLIQAVARTYPKVELHLNEELTGNLVDQLVRGRVDIALFTPIG
LPPQVSFSPLLEEDFYLIHRADDRHAPPPGCVTLAEAVARPLVFPSRAHS
HSTRACVDQALERLHLPPAQVAMEVNSVHILKSAVEAGIGPSIMPLNLAL
REVAEGRLVAHTIQPREVFRTLGICVCEALPGSNLRSAIANLIAQVVRDM
SRSGEWPATRLLPEA
>PFL_4810 transcriptional regulator, AraC family
MPSLETPPPPLAPEMERQRVELAAIIARNTAEDGSYATAIDSLFVSRHSS
SHQFGSVLAQPALCIMAQGRKEVRLADESYNYDPLNYLVVSVSVPLSGKV
AIVSPEEPILALRLDIDPGEINALIADAGPIGVPARPTGRGLYVERLDPA
MLDAVLRLTRLLDTPKDITMLAPLVRREILYRLLRSPQGHRLYEIATANS
QGHRVNQAIKWLNGNFVHPLRIDDLAREVNLSVSTLHHRFKAMTAMSPLQ
YQKQLRLQEARRLMLAEGLEASVAGYRVGYESPSQFSREYSRLFGAPPLR
DMARLRVSS
>PFL_5173 transcriptional regulator, LysR family
MVEQRLPPLNAVRAFDAAARLGSYVEASRALHVTQPAIGRHVKLLEDWLG
VQLFERTSRGVNLTPAGEKYHRKIAAALQLIIEAGREVQPRAAERWLRIM
VVPGFAKRWLTPRLEALRHVRPGLKFAIEPNSTFSEVDAKSSDLGIAYGL
DGQYAESRVSLICPRVFPICTPAYLASIEAIREPADLARHELIHFDDGEW
WNMWFAANGLDIQLTSDLIYVNNDHALSVAESGGGIALANEVLVREELKA
GTLVRVLEDQVQLESYRVLTPASEWSEDVEWFIQWLKAELEADFPEARIG
VR
>PFL_5085 transcriptional regulator, AraC family
MSNQTSTPLRRVSILAIDRVFASTLMQAKDFFHLASLRYGKQLGQGLTPA
FETRLVSPDGQPVCSFSDVIMPVDGPLEDTDIIILPAFWDDFDTLCQRYP
QILPWLRAQHARGAVLCGEATGVFWLAEAGLLDGKEATTYWRFFSAFNER
FPKVQLNQDKHLTDADNLYCAGGTTSACDLYIYLIERFCGANVAQAVARD
ILYEVQRSYAPGRIGFGGQKLHQDVIILQIQHWLEEHFADKFRFEDVARE
HGMSIRNFMRRFQTATGDKPLHYLQRLRIETAKGLLSGTRKSIKTISYEV
GYDDASFFARLFRQHTELSPNQYRQQFQQQAA
>PFL_2706 transcriptional regulator, TetR family
MSQEARFSRLEPDLRKAELIEATLTCLKLHGFQGASIRKISAEAGVSVGL
ISHHYSGKDELVAEAYRAITGRVMTLLREAMEQAAPDPRQRLSAFFRASF
CAELLDPRLLDAWLAFWGAVKTAEAINLAHEHSYGEYRNELAGLLGQLAG
LQGWKGFDADLAAISLSALLDGLWLESGLNPGTFSPQQGVQICEAWVEGL
LASQGRGFIRPT
>PFL_4492 hypothetical protein
MAHNSSAITGIELEQFMDRLEAQQQEQETDALLAQLQAQPLQADSLASID
RLHTLWMQAGDSAAARAVIDQDGDALVQAAPEPARAELMMNLAILRLRVA
NYLDDEPTLIEVLGQLEQMATQTLDFNVEHYRRYRIFDDLERASCEIALK
TIEVRYALTLGNPARAALRAWDAADQYQRRARVLAHHDRNEEARSAALEA
VNAVRTAGPDQDIDEGDWLWLGNSLIEIIPLRLALFEQPIAQLTAGRSLP
QRREWEVRTARLAARALHAQGDLAGALNICNAAALSLDSDGGNNFIEYEL
PWLMEAGRIDEAGFRAFIDVYDRQTELWPATARLVLDRLQDPDERSAWWP
ICVMRACITEEVLQSFLQALPSIETSESATTPLLAALSLAMEDLQAGDAL
YTEARAEAVRRAPDHPWITRLAAVHDAEHGLIDAATEASLLQNAIQAGRM
QDNRSAFSLFAARINSQGIIEALKAPKPVLSCGKHAYNYALGIEDLAEAE
ADKLPPDARDQAYSLLREAQRDAYEQGQAHMERYFASGSGHPYDACAHLY
SMLCNNLAINYRYYNPIRYEDAIELHTRGIAASPFAEHYNGLLSARISLE
DLPGIIDAAEQLWHYSAEFGYSRHNPDEYVASVAYALYKLDRDNEILIWL
ERLLKWQEEQGVSDQQLDSSALFARIQVARYLAHAHPDNADSLWQRYQPA
VLSLNEVSVMSASVDFLKARGRAAEAIDYCARTLALCAPDDDYDIRCRAR
IEQILSELQAPAQPAGKKNWWQIWK
>PFL_1031 transcriptional regulator, LysR family
MVTVLLRNIDLNLLVVLDALLTEKHVTRTALRLHLSQPAISHSLSKLRGL
LDDPILIRRGSELVLSSLAQNIQQPLREILGQIETLFGKSIDFDPASSQR
IFTLAMSDYGAALVLPNLMVRLRRDAPNTTLVVTQDTRHGMFEQVSQGKI
DLALGVFPNLSGDISTEVLFEETFSCLLDRRTLPADGTLDLDSYLARPHI
LVSMDGSANGEVDSLLRDEGLQRRIAVSVPHWRTAPSMIHNTDLILTVAT
RTLDEALLNQDLIQLRPPLPIPPFPFVQIWHQRFDNEPAHVWLREQVKQV
VAHSALGG
>PFL_2326 transcriptional regulator, AraC family
MAVAPGSSQSYRLPCHAPREHSQAPGGGSRQQLPEILGDCHFESLPLARG
LTLVHSRYHPNRPLIEEASSCHAGRLLVITCALQGTSGYLDTKGSSLAFR
AGHTTVSAFQASRGERRYGANETVEQLRLLVGEALLQQYLGPARACELLG
QDALQLLACGPTSRASAGHLSALAQPLGLQQPPTLELHIHALSLLSLQLQ
ALAPAPAVPGRRLKAADLERLQQVRDLMFEQMHQPLTVAYLCAAVGLNEF
KLKQGLREHYNTTPQRMLLEIRMGHAHRLLEGGCQVAQAAYQVGYRFPGN
FSAAFTRFYGKPPKSVFGPRR
>PFL_0535 transcriptional regulator, LysR family
MQWNLEQLRLFVGVAELRSFSAVARQQRKAQSAISSAIAQLEDDLGVSLF
ERSSGRQPRLTEAGSALLQEAREILRQCDRLNGRALALMRGQEARLRLAQ
DEAMPYQPVLDSLEALAEHFPSLEVQLASGAQGDVARKLVERRADLGLLF
HHEQMPETLERRALGSVEMVTVCAVGHPLAHEKRVNRQLLALHRQLLIAP
QASGYPGGEQVSPQVWRADSFYVLAEWLMRGLGWAWLPRHVVQYPAYQNQ
MVELASQWTPPALVVELAWRRDEPLGPAAHWLAERFAVHLKAIG
>PFL_2453 NAD-dependent deacetylase
MQFDPKRLAQARHVVVFSGAGVSAESGIPTFRDALTGLWEHFDPARLATV
QAFREDPALVWGWYEWRRQKVLQAQPNPAHLALAELARRVPRLTLITQNV
DDLHERAGSPSVLHLHGSLHTPKCFACSRPFKGQLPLPDLPEQGASLEPP
RCTGCNGKIRPGVVWFGEPLPQATLKAAFNAAEECDLLLSVGTSGLVQPA
ARIPQLALQHGACVVHINPQPQACTGAEEYSLEGKAGQLLPELLRQAFA
>PFL_3895 acetyltransferase, GNAT family
MNKIHVRVADWQKDNAEIRRIREAVFIAEQSVPPELEWDADDDSAVHFLA
FEGDFPIGTARLLPDGHVGRVSVLKDWRGLKVGDALMRAVIDEAEKRGLK
QQMLSAQVQATAFYERLGFSIVSEEFLEAGIPHVDMVRGA
>PFL_3150 acetyltransferase, GNAT family
MDVADVVVLQASYSNPVHAEAIGVLLNHYAEDPMGGGQPLDADRLQQLPA
ELAKRPQAFSVLAFAGGQPVGLVNCFEGFSTFACRPLVNIHDVVVLDSYR
GQGLSKRLLQKVEDIARQRGCCKVTLEVLEGNAQAQAAYRACGFANAMLD
PAHGRMLFWSKAL
>PFL_2462 transcriptional regulator, LysR family
MDLFQAMSVYVKVVEAGNMTAAARECGMSTTMVGNHLRALEQRLGVRLLN
RTTRRQRLTDFGRDYYQRCLAVLGLVADSERLAEQVQGEPTGTLRITAPL
TFGTERLAPALDEFRQRCPQVKVELTLANQRFDLTDGTFDVAVRLGNLDN
ASLIARRLQDYTLTICAAPEYLERCGTPQVPEDLQRHNCLAFAYPAGDEW
SATATLWPLRGPEGDVQVPVSGSLLANTSSGLHRAARGGLGLVMMPDALV
EEDLQQGRLVPVLQDYQLPFRTMHLLYAQDRYRLPKLRSFVDFALEKWGR
QADSLASSIIAADSV
>PFL_1804 transcriptional regulator, TetR family
MQKEPRKVREFRRREQEILDTALKLFLEQGEDSVTVEMIADAVGIGKGTI
YKHFKSKAEIYLRLMLDYERDLNELLHSADVDKDKEALSRAYFEFRMRDP
QRYRLFDRLEEKVVKGNQVPEMVEELHKIRASNFERLTLLIKGRISEGKL
EDVPPYFHYCASWALVHGAVALYHSPFWSNVLEDQEGFFQFLMDIGVRMG
NKRKRDPDTSNS
>PFL_5749 DNA-binding protein
MNVPTDIQIIHGPDGSPAFVVIPYAQYMAQYKEADLIPHDVVSRMVDGAT
PIRAWREHLHLTQDEVARRLGISQPAFAQQESVARPRRATREKIATAFGI
RADQLEL
>PFL_2957 DNA-binding response regulator, LuxR family
MSLAVNKPLRIAVLDDHALIRMAMQLQLQSVADFQLVGLYASSGELISAL
RDTELDLLVLDYQLQECDLDGLRLIRLLRNKYPHLLILVSSATETPFFVK
QIIDIGANGFLGKSQSLDDLIPAIRTVASKRLYLSPLLAFAVQHPPIGPA
AEPGSPPLTSLETLSPKENEVLRCFLDGLRISQIASKFSRSIKTISGQKQ
AAFRKLGIRTDAELFKVQRKLDLHIASREPAEDAFHDEASEPTLPPTRST
I
>PFL_5944 transcriptional regulator, AsnC family
MHSDLDAYDRRILALLQEDASLSSAQIAEQVGLSQSPCWRRIQRMKEEGV
IRGQVTLLDRKKIGLNTQIFAEIKLNAHGRSNFTEFTEAIRGFPEVLECY
VLMGAVDFLLRIVTADIEAYERFFFEKLSMVPGIQEVNSIVALSEIKSTT
SLPVMR
>PFL_3389 transcriptional regulator, LysR family
MTLTQLEIFSRVAELQGFTSAATRLGITQSAVSHAIKSLEQELQVDLFRR
HQAQVELTDIGTQLLLRARAMLGLAATLAQEAADARGMKRGTLRIGSFGP
TSSIRLLPRILHDYRREYPDIEVHIDEGPDRQVLQWLEERRVDLGFVVLP
QERFDTVPVVEDQLLALIPASHALASEAQLRLDQLCHDPFVLTEAGSAEL
VSRLFIGAGLRPNIRYRSTQLLSTLETVARGDALSIVAELSLPQAADPRY
TSRPLEPAVRRQVGIAVLDRRQASPAALAFIQHAQRLYRR
>PFL_3826 transcriptional regulator, AraC family
MPPKGHEKIVRRSIPGLPSLPRPVYGRTESLPNRALTRRHSHPWVQLSYA
IAGVLEIQTSGGRFIAPPQRAVWIPAGVPHRVFSSPRTEMRSLYLDCSVT
TWAAPDSCQVLAVSSLLRELIRAFSELPVEYVEDSADGRLAQVLLDQLAA
APQLDLMLPLPHDVRLRAIYRSLQAHPEQATTLGQWSQKLGVTEKTLSRL
FLKDTGLTFRAWRQRLRLLGALTPLEQGERVTDVALACGYDSTSAFIAAF
RQHFDATPGEFFRDL
>PFL_2062 transcriptional regulator, LysR family
MDLANLNAFIAIAETGSFSGAGERLHLTQPAISKRIAGLEQQLNVRLFDR
LGREIGLTEAGRALLPRAYQIINVLDDTRRALTNLTGEVSGRLTLATSHH
IGLHRLPPLLRAFTRRYPQVALDIQFLDSEVAYEEILHGRAELAVITLAP
EPHSLVKATAVWDDPLDFVAAPEHPLVSSGQVSLADIALHPAVFPGGNTF
THHIVQRLFEAQGLTPNIAMSTNYLETIKMMVSIGLAWSVLPRTMLDDQV
ARIPLPGIQLHRQLGYILHTERTLSNAARAFMALLDAQVDWPGNPA
>PFL_2948 transcriptional regulator, TetR family
MVAKKLSAPNVTKTRLLEATEALFIKYGYDAVLLRQITERAKVNLAAVNY
HFGDKDSLMKALLMQRLGPLNDQRLELLAKCEEQAEGPLDCETLLGVLFA
PAMGLERSDESGGVEGRSFIRFLGRVYSDTSPFIQEYLKEHYQPVFERFF
KAFALALPDLPRNELGVRLQFALKAISGVMAGTELRLLMQAMSLGRPATD
AEVMAKLISLVSAAIRAPMQDPDSEQALEKVLDTQRLIRQQSHSLAG
>PFL_0980 transcriptional regulator, LysR family
MSRQFHAQTYVWLHVFSCAARHLSFTRCAEELHITPGAVSQQIRQLEERL
GFRLFHRRPRGVELSAEGQRLALTVSEAYGSIDAELRRLDAGMIGGTLRL
RSIPSFLGKWLTPRLPRLQQRYPEIQLRLVAEDSSVALHEGDFDLAIDLN
DGSYPGLQSTALLDEQIFPVCAPSLLRGRPPLHGPADLAHFALLHDITAW
RGSYEYAEWEFYLNAIGFEGADVRRGHTFNRNHLTIEAAIAGMGVAIARR
TLLNDELERGTLIVPFGLAVPNHKRYVLLYAPGALSHPGVRAVHDWLVEE
AEIFRGLHPLGEGQL
>PFL_2521 transcriptional regulator, AraC family
MNKAAQQLHLPPFSEALPAPIFFRAANLPAHATYPRHRHPWGEFVYAYSG
VMEIELGDHHYLAPPQYGIWLPPNVEHMGFNRHEACHCSLYLAPELCTAL
PARHCALSLSPLVLALLDDLRQAPPGLPQSDEQQRMLQVLVDKLGHASCA
GSYLPSSDDPLLGPVLRTLKANPGDPRSLPQLAHAANTSERTLMRRSQRE
LGMSLVEWRQRLKVVQALALLEQGRTVESIGLDLGYSSASAFISMFRRMM
GTTPDEYRRQAMGRD
>PFL_4899 transcriptional regulator, LuxR family
MTLSLDDIAWHRSVGQMIEALDQASFWPQLVRLLEQYVSFDSWVALLFCS
ERKPLVFAECPGEDGSPDQLFQDYLNGLYLLDPFYVASREQSRSGLLRLA
EVAPEHFQLTEYYQRYFRLNVVADEIQFNCQLADGRTLCLSLGSRQRFAP
PQIALLSLIEPWVVALLRQRLPHESIEQDNPAQLHPMPDWRSQLDHSMQQ
LRGAQLTARELDVGRLMLSGCSNKEIARKLEISAETVKVHKKHIYSKLGI
KSQSELFSIFLQAQSA
>PFL_0200 DNA-binding heavy metal response regulator
MRLLVVEDEAKTAHFLAKGLGESGFAVDVALNGLDGRYFIEQQEYDLIIL
DVMLPGLNGWQLLQLVRQRGATPVLFLTARDAIEDRVRGLELGADDYLLK
PFAFAELLARVRTLLRRGPLREAESFSIADLEIDVLRRRVSRGGQRIALT
NKEFALLHLLASRQGEVLSRTLIASQVWNLNFDSDTNMVEVAVRRLRAKV
DDPYMPKLIHTVRGVGYQLEAPDEAL
>PFL_1156 transcriptional regulator, TetR family
MSDNISANVGPGRPKDLAKRQAILEAAKVLFLSNGYASTSMDAVAAEAGV
SKLTVYSHFNDKETLFTAAVVAKCEEQLPTLIYELTPETPVENVLLNIAR
GFHHLINSDESVNLHRLIMTLGSQDPKLSQIFIEAGPERVLQGMERLLAK
INQLGTLRIDKPRNAAEHFFCMLKGGANFRLLYGCGEPLRGAAAEEHVQE
VVALFIRAYRP
>PFL_5759 aminoglycoside acetyltransferase (6') type I
MTPIEPGSSANAGGWLQLRQGLWPDCPQDEHQAEIQQILAEPQRYGCWLA
CTENGEAVGLAEAALRHDYVNGTDSSPVVFLEGIYVAPGHRRQGIAQRLI
EQVTYWGQQQGCVEMASDTSLDNLASQDLHHALGFEETERVVYFKKRL
>PFL_0730 transcriptional regulator, TetR family
MTFEVPAHSAPHPGKPASRIRQKNEEAILQAAEDEFARHGFKGTSMNTIA
QKAGLPKANLHYYFTNKLGLYIAVLSNILELWDSTFNTLTAEDDPAEALT
RYIRAKMEFSRRQPQASRIFAMEIISGGECLSEYFSQDYRAWFQGRAAVF
QAWIDAGKMDPVDPVHLIFLLWGSTQHYADFATQICRVTGRTRLTKQDME
DAGNNLIRIILKGCGLTPALKD
>PFL_3313 RNA polymerase sigma-70 factor, ECF subfamily
MPSTPLASPDSVHSLYDAHHRWLYELLRRRLNHAWDAADLAHDIFVRVLK
RPPVLRDEVHQRSYLATVARGLCIDHWRRRQLEQAWLQALAARPQAVQPS
AEQQAIIVETLYEVDAMLSRLPAKVRSAFILAQLHGRPYQAIADELGVSE
RMVKKYLAQALLHCALLEAELDGLLVD
>PFL_0764 transcriptional regulator, MerR family
MYIGQAAQLSGTTVKSIRHYEAIGLLPEAPRQGRYRLYDAQSVEQLIFIK
CAQQLGFKLKELQQVFATHQGQAFPWDRAQAALAQKKRELQQQIEDLQQL
QGRLELFETSLQQAREECPLGSR
>PFL_1815 acetyltransferase, GNAT family
MTVEIRPALPSDAPQILAFITELADYERARHEVIASVADIERSLFSEGAT
AHGLICLREGVPIGFAVFFFSYSTWLGSNCLYLEDLYITPEQRGGGAGKQ
LLRHLAQIACDNDCGRFEWSVLEWNEPAIQFYKSLGAQPQEEWVKYRMDG
EVLRAFARG
>PFL_6062 DNA-directed RNA polymerase, omega subunit
MSPLAHPGSAHIAFATRKTMARVTVEDCLEHVDNRFELVMLSTKRARQLA
TGGKEPKVAWENDKPTVVALREIAEGLIDYAAIAEAEIVEDEPLFAAFED
ESNEAV
>PFL_0614 transcriptional regulator, LysR family
MFAHLPLTALRTFESAARLLSFKAAAEDLSVTPTAVSHQIRSLEHWLGVA
LFERLPRQVRLTEPGQRLFHSLHGALLEVTQSVDTLRPTPSNAQLTVSTT
AAFAALWLVPRLGRFYARHPGISLRLDTQCEVVDLQQDASIDVAIRYSQE
GYLDLHGLCLFDERFAVYGSPQQVALARQQAPTLISVHWRNSRLYADGWQ
AWCAQAGESWFDDAPLIRSYDEEQYALQAAIAGQGLVLASDILVSQSVAS
GLLQPYRPEVQVDGAGYSALCVPGRERHPPVRAFLQWLQQESLLAGHPPL
ARS
>PFL_3973 transcriptional regulator, AraC family
MKTPPMRLGDLSVGFVHSLVDAVLSYGQDPTPLLEQYALDAARLGEAGAR
LSIPRYMRLGHGAIQLTGDPALGLRMGRLSRLSQAGLAGVTAAQAPSVRE
AARCLTRFEALYGSNYRGQSSFHEDASGARLCFYSISPYNAYNRFVVDSI
ISGWLQQLSSVADQAIHAEQIDIEFQRPDYHEAYAVLGPTPIQFGAEQNQ
LRLSQASLGLRNPQHCPSTWRHLVQLCERELEQLTRTRSLRERIIQMLGP
LLNGGREPDLEEVAMRLKLPTWTLRRKLAEEGTQFRAILNDTRRDLAMTY
IRDTELAFGEIAYLLGFASAEAFQRAFKRWNGQTPGDFRRSHRQFG
>PFL_5862 transcriptional regulator, AraC family
MDKPARESIRFWQSAPLAGVELLAARYIEQRFVPHVHEGYVIGMIMAGAQ
RYRYRGAEHLAGSGTLVLINPDELHTGAKGVEDGWLYRAFYPENQQIFGL
LDELELPSGSLPAFGATLYRDPDLVQGFARLHHLLESPATALQQQTQWRE
MLLLLLQRHAGVRAPGEPGQEHRAIVQAKELLRSQLAAPPSLEELAAAVN
LSPFHFARVFRRATGIPPHTWLMQQRIAKARALLRDGCLPLEVATQLGFA
DQSHLSRQFKQVYGVAPAAYRSAVLQ
>PFL_5393 transcriptional regulator, IclR family
MAGSQIERVFSVLERLTADPRGLPLQTLAEQLEIPKSATHRLLAELIRLG
YVRQNPDNLRYQLSTRLVAMGFRYLSASGADIVQPVLDRLAVESGELVRL
GVIEGERQTWIAKSQGARSGLRYDPDMGREAPLFYTASGHAWLATLSDAE
ALSLVERQAAEPPTDLGPNAPRSNIELLERLRLAREQGYAWVEESSAVGT
SAIAAVVRHPIDGRVVGVLSVAGPSARLPLARLHELAPLLLQFAEELSAA
SQASELFN
>PFL_0965 transcriptional regulator, LuxR family
MTRCPERPGFMPRLSSHHFSRSRLSAPLLASGARVKLLCAPAGSGKTALL
AECLQQAPETCRVSWLPLSGGRHSPQGLCAALAQALGLERDDEATVLQHL
AHLQAPAWIFIDDYCRVAAADLDLLLDRLLSLDNPQLTWWLGCRRRPLCN
WPRLLLDDQLFELDGPALAFSQIEIEQLLQRLPQPLCAQTASRILQRSGG
WCAGVRIALLEGSELTIQPCKPGRPNTLLEYLEHELFSVLPAELAQVWQV
LAHLPRFNAELCEHLFGVGEGAQYLRTLQDMACFIEPWDGGGDWLQVFPP
LARLMRDEAWPGGRSWHRRACQWFIAQEDWQSAFEQALRAEEYEVAVSLL
EHFSFEFLFQQDNALLLLQLHERHGGELLLVSPHLVGLLVAAMLFAGRFE
QAGQCMAQMARFAPQPSAAQQRQLLARWQAQQGWLLHLSGRMAAARQHFI
EALDELADSAWTTRLLCLSGLTQQALLGAELDVAQALNREALCLARAQDA
QLFEGLLELDHAQLLEQRGAPHRAQSLLEQVCERLSMQALRATPLLGRIA
LRLGRLALRQGHAEQAAGYFRSGLEDCLLSHDKRALYGFLGQAQLAANQG
DYAQAFVRLRDAERLMQQRQIPDTVYRGVLLQVSSQLWLQQGRPELAQEA
LSRLLRHFRGPQALQAPPATLELIPGIEYLLVLAEVHLGRAQAPIATLQG
LLARAQRHGMQGLEAEVQLALAEVAHLQGNPALAQEALQAGQALVQRCNL
PQALHELRLRQPLLLAAGEALQTPSSAGPLENRESLLSLRELQVLQLIAQ
GCSNQQIAEQLFISLHTVKTHGRRIHSKLGVERRTQAVAKAQALGLMS
>PFL_3820 transcriptional regulator, AraC family
MHRMTSASFRVLADVMREGGANVDALLRTFGSSIQDVEENPKGVRLELVY
QVMREATRRTGNPDLGLLAYSKAHPANLEALGYAVMSCATLGAALQRLVD
YQALTSNGFCMCLERKPDALQLIGFDVTAEPSLIPRAVIDAGAAQTLGLL
HWLLPQHKPRPLVAAFTYPEPADTRMLRRLMGDNLQFCAPHNSLTFSSQD
CAIALPTADPALDVLHMEYARNRLNVLLSGSMTARVRRALSESLAQGAPS
DLPHIAQAVGVSTRSLQRSLGHEDVHFSALQDEARLMLAHSFLRNSMRSV
KYIGALLGFRDQSSFHKACLRWFGMTPGRYREQ
>PFL_6024 transcriptional regulator, TetR family
MSRNDRKDQIIQAALELFRSKGFAEVSTRDLAEHAGLSRSHVYHYFSDWK
GLRREAFVRFADDQLEAVGQPLRGAAPMDALLGFLRDCLPDSAEAGWALW
LDAWDEAMHDAELAQAYLRINGQWRDMLAAIIADGVRTGVFRCASPERAA
RQLFAQTMGYADDLLLRASPEAAQSALQEVMEVAGLLLGFEG
>PFL_3513 transcriptional regulator, AsnC family
MPLDLDRIDKALLIALQDNARLTNAELADSVALTTSPCWRRVKILEESGV
ITGYQAILSPKALGYGVTAFVSVMMESHSQDTARAFEQRLLEIPEIIACH
NVSGRYDFLLEVLAKDLESFGEFAREVLQTLPAVKEIYSSFSFKSVKPLR
QIPVQE
>PFL_3069 transcriptional regulator, AraC family
MGRRSAGLAGAWACSRPCRCVLVLPGRRGCHLAQSPLAFSRSLPKMAIPG
LSKPLAAMSEKDTISMQLVREALLQSCAPGAATDEVLHKVGIDPAGLRQG
TARVPASAYARLWRLLARRLDDEFFGMDPRRLKSGSLAFLCRSAMAQPTL
ASGLDSVLGFLTLMFERMPAQLVHQQSLAEIVLLEDEHEPRRAFTYFTYW
MIVHGVACWLAGRRIPILAIELRGPQPDFCDDYRVMFSDNLRFERPRTRM
IIAADCLDLPIKRSEEELKRFLAHAPANILVKYRDPESLASRIKQQLRQL
PGEQWPESESLAQSLCMSASTLRRRLAEEGQSYQALKDSVRKELAIVWLA
EPQISFAEIAGRLGFADTSSFYKAFRKWSGSNPGHYRSLILNDPHLS
>PFL_4529 hypothetical protein
MIRTQNNCTNIQYKANALPNLPEKTMASLAMKITLERIALYQFTPQHCAQ
ARDMLGWDMDQLSRESAVSVQAIQRFEAGYEVRDVTRLALAFCLEAQGLV
FFPGFTPGRGMNIKGATPNPMERPDYALIE
>PFL_4796 lipoprotein, putative
MRFVLIAALAVSVVGCTRWSMDHHLNNAYRAYDRGNCESVMLELSQVDRD
SRARRYIQPEVSMLRGQCLERQKLFVDAAQTYQFIITQYPTSEYAFRARA
RLDTLQQLGHYPANGAAQVRRTAL
>PFL_0766 transcriptional regulator, LysR family
MHFDLIDLRLYLNILEAGNITAGAARSHLSLAAASARIRAMEASLGIEFL
ERGRRGIRPTAAGKALAQHARTLLLYAEHLQQDLGEYARGVKGQVRLLCN
TTALSEYLPELLADFLHSQPHVDIELQELPSQRITHALRQGAADLGIVSD
AVDTQGLMTRAFRDDPLVLVMPPDHPLSSLPAPSFSDSLAHDYVGLASHS
ALAVYLEEQALHLGRRMQLRIRAEGFDAVLRMVARGAGLALVPLAALQRN
LHLALQSRPLNEAWARRRLLLCARDFDALPLYAQGLCRALLEP
>PFL_2868 transcriptional regulator, GntR family/aminotransferase, classes I and II family protein
MKRYEKFADDIAELIRSGVLGPGQRVPSVRYASQTYGVSPSTVFQAYYLL
ERRGLIRARPRSGYFVNAHAPSPFSEPVISSEVNESTEVDVSELVFSVLD
SIKDPSTVPFGSAFPSPTLFPLQRLSRSLASASREMDPRVVVTDMSPGNP
QLRRQIALRYMVAGLMLPMEELLITNGALEALNLCLQAVTEPGDLVAIEA
PAFYASLQVLERLKLKAVEIPVHPRDGIDLGVLAQTLERHPIKACWCMTN
FQNPMGASMPEAKKQELVELLRQHQVPLIEDDVYAELYYGQQAPKPAKAF
DTEGLVMHCGSFAKSLAPGYRIGWVAAGRYAQKIERLKLMTSLCASMPAQ
AAIADYLQHGGYDRHLRKLRYALEEQQSAMLAAIARYFPAQTRVSQPAGG
YFLWLELPPQMDSLKLFQMALAQGISIAPGPIFSPTQRFRNCIRLNYGSP
WNEAAEKAMETLGRIIRSF
>PFL_1588 transcriptional regulator, AraC family
MSERTTSASWTLGIVKALEMDGLDCRALFKQLGLDYGALEDPDARFTQDS
MTRLWQRAVELSGNPAIGLNMGKVVRPASFHVAGYALMSSRTLAEGFQRL
VRYQRIIAESADLSFRLLPEGYALILTVHGDHLPPTRQSAEASLACALAL
CGWLTGRALQPRKVLLQGEQPGDLQPYKDMFHAPLVFAAPFDALIFERAD
MEATLPTANEAMALLHDRFAGEYLARFSESRVTHKARQVLCRLLPQGEPK
REMVAQTLHLSQRTLQRRLQEEGTSFQALLDDTRRELAEQYLAQPRMTLL
EIAYLLGFADPSNFFRAFRRWFDATPGEYRARLQAAPAPVNDARMPEYTT
RTP
>PFL_4644 temperature acclimation protein b , fragment-related protein
MSQRQSGTVKWFNDEKGFGFITPESGPDLFVHFRAIQGNGFKSLKEGQKV
TFIAVQGQKGMQADEVQAEA
>PFL_6035 DNA-binding protein
MDVGERLQSIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLRKV
LGGIPMSMVEFFSEEVLQETPSQIVYKAHELIDISDGAVTMKLVGRAHPS
RAIAFLNEIYPPGADTGEEMLTHDGEETGILLEGRLELVVGLETFVLEAG
DSYYFESTKPHRFRNPFDVPARLISAATPANF
>PFL_2319 transcriptional regulator, LysR family
MDISLRHIEVFRAIMQAGSVTGAARLLFTSQPTVSRELARLETLSGLRLF
DREGGRLLPTAQALLLLEEVERAYVGLERINSVAQSIRRFEHGQLSLSCL
PLFSQTLLPPVCKQFQAQHPGIGLSITAQESPLLEEALSAQRHDLGLTES
EHLPRGTQGELLFCADMVCILADDHPLLARPRLALVDFRGQDFINLSGLD
IYRQTLDEHFRQAGVDRRIVVETTNAASVCAMVRQRLGVAIINPLSAMEE
AGRGLAIRPLQLSVPYRVMLIRPDYRPSSSFVEGFSEALRTQAKALQEQV
GRIVQGGQGVNRSG
>PFL_1986 peptidase S24-like domain
MIDKESIRHMFAERLHAALDAKEIRQHGRGADIIKYLESKGISKSAQAVS
KWLNGSAIPEIDSLTALAAWLGVRREWLEHGVMPALPFEDENQTDEHKAS
TIQTTRVPVISWVEAINWSSRSLDNETLREKTTLPCPLAISKSGFVLQVA
GDSMTNYGPGKSYPHGCLIFVDPEVVAKNGECVIASLPNLHHAIFKVLVE
DAGKRFLKSVNPLYPMIEITDGARLCGKVIGTFIPET
>PFL_3747 probable phage protein YPO2126
MANHSTNVISFNFGKQQVRTLLIDDQPWFVAADVCVSLAIGNVSLAVNGR
ADRETDGLDEDEKGIATVNTPSGAQEMLVVNESGLYALIFKSRKAEAKRF
KKWVTAEVLPAIRKHGRYEDQGKMAILLDELIGMSELNVIKGLIRDKAKA
VPPSKQQSFSLTMHNRLHTRFSVPRTELIPASQFEQACNFIGGYSLEGEY
LERENTALNTLTDKELYDVFFLMHHFLAVKRIYDSYQLDAALRMLRSGAG
IEMLDHFRDSMMAVSTLQRRLPDMEAAAVRIGHRPGTVMGRAAA
>PFL_3386 homoprotocatechuate degradative operon repressor, putative
MNTPRPSLTLTLLQAREAAMAFFRPSLNQHDLTEQQWRVIRILRQNGELE
SHQLAKMACILPPSMTGVLTRLERDQYVSRRKSPEDQRRLFITLTDKGQA
CFESMSGDMEINYQKIQQQFGEDKMQALLALLNELKQIKP
>PFL_4813 transcriptional regulator, LysR family
MKRLPPLPALHTFLITAQCCNFTRAAEQLHITQGAVSRQIAGLESHLGYP
LFLRQARGLSLTAEGLEWLPRVQQVFEMINGAVDEIGGQKRNLRLKAPTC
VMRWLLPRLLQWQKERPDVPVQLTTTIAHGVDFGREPFDAAVMYGAPPAP
TLGSRHLFNEQLTPVCSRPLLEGPVPLTSPRDLQQHLLLHPSHDQRDWQT
WLKAAGTPLDTLGKGQHFETLDLAMSVASQGTGVAIGDWALIGDDLSAGR
LVMPFELKVPTGQAYYLVYPERPGPSPALQELLDWLVEQARQR
>PFL_1890 transcriptional regulator, GntR family
MTFKAPDSLAEQIAHHLAERIIRGDLKPGERIQEQKVTLALNVSRGSVRE
ALLILERRHLIAILPRRGAHVTELTEHKVRSLCTLMSELYILLGNSVASG
WTQQSDMTPFLQIQQRLESAYERQDIRAFVEDSFSVMRAAYPFANNPYLQ
ETVENLQPAMSRAYYLALDQRKASMSEYLALFEQLLAAVLARDLVQIRQV
LTAYAERSSDLVVSALADA
>PFL_2168 acoR, acetoin catabolism regulatory protein
MLSAHSKAHVDCVSRVLKNADHLPQAPVPSLILDSWRRSMEQHQLDPGSL
QGPRILSENVLKECRERSELFLRIASEEVARLHGRVRDADYCVLLTDAQG
QTIDYRVESTLRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTARTPITVHK
RDHFRAAFIGLTCSAAPVFDPQGELLGVLDVSAVRSPDDRRSQHLIRQMV
VQSAREIEQAFFMNSAQGYWVLRAHASPGYVDSQPDYLLAWDDDGCLRAL
NPAARHYLLRRYGRLPQHITQVFDPQLLQRARDEALCPLSDNLHGRLQAP
RRPAQRPRLSLTGEPLDPRVEQSLRLAVRVKDRHLPVLIQGETGSGKEVF
ARQLHQASQRRDRPFVAVNCAAIPENLIESELFGYVAGAFTGASNKGMQG
LLQQADGGTLFLDEIGDMPLALQTRLLRVLAEGEVAPLGAAQRKAVDIQV
ICATHRDLEALVAEGSFREDLYFRLGGARFQLPPLRERSDRLALITRIVE
EESKRCGAPVQLGNAALECLLGYRWPGNVRQLRHVLRYACAVCEGPLIQL
HDLPEQLRGAEAEGALPALETATSPERQALLDALVRHRWKPVAAAKALGI
SRATLYRRVQQHGIQMPGRSPA
>PFL_2204 agmR, DNA-binding response regulator AgmR
MYKILIADDHPLFREAIHNVISDGFPGSEVMETADLDSALALTQEHDDLD
LILLDLNMPGMHGLNGLITLRNEAPTIPVVIVSAEQDKQIVLQAITYGAV
GFITKSSARSQMTEAIEQILNGNVYLPPDIIRTQKSQPGRRSSETPSFPP
ELLQALTRKQLLVLERMTKGESNKQIAYTLDIAETTVKAHVSAILRKLNV
HNRVQAILSAGDIDFGAYLRR
>PFL_5997 algQ, transcriptional regulator AlgQ
MLESCQNAQERWGGVHLLIDRWLQERHELVRAYDALGAEPEALSESKKPL
QEFCGILVDYVSAGHFEIYEQLTSEAKAFGDKRGLELADTLYPRIDVITE
KLLAFNDLCDAGQCVAQKFKELGGLLHERFELEDCLIEVLHNAHKQEAVA
QA
>PFL_6003 algR, DNA-binding response regulator AlgR
MNVLIVDDEPLARERLSRMVSELEGYSVLEPSATNGEEALSLIDSLKPDI
VLLDVRMPGLDGLQVAGKLCERETPPALVFCAAPDEFALEAFDASGVVHL
VKPVRSELLLEALKKAEKPNRVQLAALTRPAAESGNGPRSHISARTRKGI
ELIPLAQVVYFIADHKYVTLRHEGGEVLLDEPLKALEDEFGDRFVRIHRN
ALVARERIERLQRTPLGHFQLYLKGLNGDALIVSRRHVAGVRKMMQQL
>PFL_4053 ampR, transcriptional activator AmpR
MLRPHLPLNALRAFEASARHLSFTRAAIELCVTQAAVSHQVKSLEAQLNV
TLFKRLPRGLMLTSEGETLLPVLRECFDRIAQTLGRFEGGHYREVLTVGA
VGTFAVGWLLPRLEDFQARHPYVDLRLSTNNNRVDVAAEGLDYAIRFGTG
AWHGIEALALLQAPLSVLCVPELARQLHSPADLLGQTLLRSYRTDEWPQW
FQAAGLGANSLLPQSVVFDSSLGMLEAALQGLGVALAPPLMFQRQLASGA
VVQPFDIGIVTGSYWLTRLQSRAETPAMGAFKAWLLEAVAG
>PFL_4516 argR, transcriptional regulator ArgR
MPAMTAHRIGFLIWPSTKALTLALAEEALRVAQRVHPEVVYELAFLQAEA
PAEGAWQLPGEPWAGKLEGCQKLFLLADEPPAPMSSGLSSALKQLVRAGC
VIGGLSAGVYPLAQLGLLDGYRAAVHWRWQDDFAERFPKVIATSHLFDWD
RDRLTACGGMSVLDLLLAVLARDHGAELAGAVSEELVVERIREGGERQRI
PLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQ
YLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRN
FFGATPREDRNQRRSSSPFELSSVPSERG
>PFL_2186 arsR, arsenic resistance transcriptional regulator
MITPPEVFKSLADETRVRATLLIADQGELCVCELMCALDDSQPKISRHLA
QLRSSGLLLDRRQGQWVYYRLNPELPGWVREILHVTAKANAAWLKDNAAR
LQNMDGRPVREAACC
>PFL_3859 benR, transcriptional regulator BenR
MQMHLLSERSSVFVQADPYAVSGYVNQHVGSHCIRLPRAGHPQASLQHRA
LASLDLCSISYGASVRVTSPALESIYHLQVLLRGHCRWRGPGQEHYFAPG
ELLLINPDDPVDLTYSDDCEKFIIKIPTHLVENACQEQRWQYPGQGVRFL
RQRYQLQELEGFVPLLSLLCQEAEALESMPKVQEHYAHILVGKLLGLMQT
NVQRGALGASAATFERIADYIERNLKHDIGCEELAQQARMSLRSLYALFE
RNARTTPKNYIRQQKLQRVHACLSDPHSPVRNVTELALDFGFLHLGRFAQ
SYRQQYGELPSDTLKRRH
>PFL_5766 betI, transcriptional regulator BetI
MPKVGMQPIRRQQLIEATLQAVDQVGMGDASIALIARLAGVSNGIISHYF
RDKNGLIAATMGYIMSMLNEGVRARRQALTDDSPRAHLKVIIEGNFDASQ
VNGPAMKTWLAFWASSMHQPDLHRLQRINDHRLYSNLCCQFRRALPLYHA
RKAARGLAALIDGLWLRGALSGDAFDTDQAIRIAYEYMDLQLAKQER
>PFL_2535 bkdR, transcriptional regulator BkdR
MRKLDRTDIGILNSLQENARITNADLARSVNLSPTPCFNRVKAMEELGLI
REQVTLLDADLLGLHVNVFIHVSLEKQVEEALQHFEEAIADRPEVMECYL
MAGDPDYLIRVLVPSIQSLERFMMDFLTKVPGVANIRSSFALKQVRYKTA
LPLPANGLTLGT
>PFL_5893 cadR, Cd(II)/Pb(II)-responsive transcriptional regulator
MKIGELAKLTDCQVETIRYYEREGLLPEPARSEGNYRLYTQAHTERLTFI
RNCRSLDMTLEEIRSLLNLRDSPQDQCASVNALIDEHIHHVKARIDGLLA
LQEQLLDLRQRCSEGPDLEHCGILQRLEVSGSVAPNESEPSHVGRSHGH
>PFL_3863 catR, transcriptional activator CatR
MELRHLRYFQVLGETLNFTRAAERLHIAQPPLSRQIQQLEDELGVLLLER
GRPLRLTAAGRFFYEHSNRVLEQLGKVCDNTRRIGLGHKTWLGIGFAPST
LYGVLPQLIRRLRSNGTLELELGLSEMTTLQQVEALKAGRIDIGFGRIHI
DDPAIVQKVLTEDRLVVALPAGHPLLGQPVSLAQLADEPFVLYPANPRPS
YADHVIALFSARGLNLKIAQWTNELQTAIGLVGAGIGITLVPASVQVLHR
DDIGFCPLLEAEATSPIILSRRIGEPSPGLTHCLHLIAQLRSEIGREHPI
VS
>PFL_4836 colR, DNA-binding response regulator ColR
MRILLVEDNRDILANLADYLGLKGYTVDCAQDGLSGLHLAATEHYDLIVL
DIMLPGIDGYTLCKRLREDARRDTPVIMLTARDQLDDRLQGFKSGADDYL
LKPFALSELAARIEAVMRRSQGGGRRSLQVGDLSYDLDTLEVTREGRLLK
LNPVGLKLLAVLMQKSPHVLRREILEEALWGDDCPDSDSLRSHVHQLRQV
IDKPFAKPLLHTVHGVGYRLAEGRDGV
>PFL_5713 creB, DNA-binding response regulator CreB
MDAMPHILIVEDEAAIADTLIFALQGEGFTTTWLSLGRAALEHQQASPAD
LIILDIGLPDISGFETCKQLRRFSEVPVMFLSARDGEIDRVVGLEIGADD
YVVKPFSPREVAARVKAILKRMVPRVAPEAVAALFVIDPERVQISYRGQP
LSLTRHEFRLLQCLLEQPERVFSREQLLDALGVMADVGYERNIDSHIKSL
RAKLRLVAAQAEPIQTHRGLGYSYSPSHA
>PFL_3887 cspD, cold shock domain protein CspD
MASGKVKWFNNAKGYGFINEEGKTDDLFAHYSAIDMDGYKTLKAGQAVSF
EIIQGPKGLHAIKISALKVPGEIVTAEAQPESALS
>PFL_0709 cueR, Cu(I)-responsive transcriptional regulator
MNIGQAARKSGLSAKMIRYYESIGLLKPAHRSDSGYRLYGDDDLHSLAFI
KRSRDLGFSLEEVGKLLTLWQDRQRASADVKALARQHIDELNQKIRELAG
LRDTLQDLVEHCQGDHRPDCPILKELASGSCCGS
>PFL_1492 cynR, transcriptional regulator CynR
MLLRHIRYLLAVAEHCNFTRAAEALHVSQPTLSQQIKQLEEGLGAPLFDR
SGRSVRLTDAGQAYVAYARRALQDLEAARRAIHDVQDLSRGSLRLALTPT
FTAYLAGPLLSRFYRQHPGIGLSIEEMTQDRLEAALAEDRLDLGIAFAGE
HLAEIESQALFIETLSLMVGPQYPQPERLPLSAEALGRQPLVLLSADFAT
RRHIDLYCRQQGIAPPIAAEANSVSAIVEMVRRGQLATILPSSIAREQPG
LRTLALQSPPAPRSVVLLGRKGAYRSAACQAFRQLLLDQDEGAASH
>PFL_4268 cysB, transcriptional regulator CysB
MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFA
RSGKHLTRVTPAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATT
HTQARYALPPVISSFIKQYPDVALHMHQGSPMQIAEMAADGTVDFAIATE
ALELFGDLVMMPCYRWNRCVVVPQGHPLTKLPKLTLETLAEYPIVTYVFG
FTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGVGIVAKMAVDT
KLDSDLVVLDASELFESSITKIGFRRGTFLRGFMCDFIEKFAPHLTREVM
AKAIACHNKQELEELFDGVELPVH
>PFL_4108 darR, transcriptional regulator DarR
MAHTPTSPRFTPTMPTAPKNVFVLAFANAQLLDVSGPLQVFASANDRARG
LGLPLPYLPRVIASPGGATLSSSGLALLAEPLPLPQEPCDTLIVAGGWGV
YEAARDPELVAWVAARAAASRRVASVCTGAFLLAASGWLDGRRVVTHWTR
CEQLAEQYPRLQVEANPIFINDGPVWTSAGVTAGIDLALALVEADLGRAV
ALEVARQLVVFLKRPGGQSQFSVTLSLQNQGGRFDRLHAWIAEHLDRELT
VPVLAEQAGMSERSFVRHYRADTGQTPARAIELIRVESVRRLLADSTLPI
KRIAAQCGFGSEETLRRSVLRALGVTPQAYRERFASIAQP
>PFL_1279 dinG, ATP-dependent helicase DinG
MISNELKTTIQGAYSRFLEAKSLKPRYGQRLMIAEVAKVLGDIDTDDEGR
RSGDPAVVAVEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQI
VYKDLPDLMRNSGLNFSFSLAKGRGRYMCLSKLDMLLQEGHAQTATAQLF
EEEGFKIEVDEASQKLFTSMIEKLAGNKWDGDRDSWPTALEDADWARLTT
DHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTNHDMVLADLALGGGAVL
PDPRDTLYVFDEGHHLPDKAIGHFAHYTRLRSTADWLEQTAKNLTKLLAQ
HPLPGDLGRLIEQVPELAREIKTQQQFMFTACEQIADFRTGEDMEGRERP
RHRFVGGLIPEHMREMGLELKKGFSRLTDLFTRLTELLKEGMDGEVNIGI
ASNQAEEWYPLFGSLLARASGNWELWTAFTVEDPEDNPPMARWLTLAESG
SLFDIEVNASPILAAEMLRRNLWNVAYGALVTSATLTALGTFDRFRMRAG
LPKKAVTAVVPSPFHHADAGVLRVPDLRADPRDAPAHTAAIIRDLPELVE
GSRGTLVLFSSRKQMQDVFDGLDRDWRKQVFIQGNLSKQETLNKHKARVD
GGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAALAEWIE
ARGGNPFMEISVPDASLKLVQACGRLLRTEQDRGTITLLDRRLVTQRYGK
AILNALPPFRREIS
>PFL_2291 fecI, RNA polymerase sigma factor FecI
MPADDLSLRCAVTDLYTHHHGWLQGWLRQRLGNAFDAADLAQDTFVRVLK
ARNAVEIREPRPYLSRIARGLLIDLFRRRSLEQAYLEALALVPEGEHPSP
EEQSVLFQALMEVDRLLDGLGPKVKQAFLLSQCDGLTYEQIAERLQISVR
SVSNYMAKAMEHCCLMQMRMQLS
>PFL_0667 fis, DNA-binding protein Fis
MTMMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHL
EGAAVTDVYNLVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKL
KQYDLL
>PFL_0858 fruR, fructose transport system repressor FruR
MKLSDIARLAGVSVTTASYVINGKAEQQRISNATVERVRAVVEEHGFTPN
PQAAGLRSRHTRTLGFILPDLENPSYARIAKLLEQGARARGYQLLIASSD
DAPDSERQLLQLFRARRCDALFVASCLPPEDDSYQQLQAQGLPIIAIDRV
MPPELFCSVISDDLQASLHLTQSLLEPEPKQIVLIGARPELSISQERAAG
FRQALEGFGGEVLIEHGEAFSRDCGRQLMEELLQRLGHLPDALVTTSYVL
LQGVFDALHDFPLKSRPLRLGTFGDTQLLDFLPLPVNAMAQQHQLIAEKA
LQLALAAIEEAHYQPGVQAIARTFKQRIQQG
>PFL_3563 gacA, response regulator GacA
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLLKARELKPDV
VLMDVKMPGIGGLEATRKLLRSHPDIKVVAVTVCEEDPFPTRLLQAGAAG
YLTKGAGLNEMVQAIRLVFAGQRYISPQIAQQLVFKSFQPSSDSPFDALS
EREIQIALMIVGCQKVQIISDKLCLSPKTVNTYRYRIFEKLSISSDVELT
LLAVRHGMVDASL
>PFL_0116 gcvA, glycine cleavage system transcriptional activator
MRLPYMRRKIPSTTALISFEAAARHESFTKAAQELSLTQGAVCRQIASLE
EFLGLELFRRSRRGVKLTEAGLSYSRRVATQLDAVERDTLSVMGQQGANV
IELAVVPTFGTQWLLPRLKDFQQQHPEVTVNLTNRTRPFLFADTPFDAAI
YFGDADWSGTQSHWLMGENPMPVCSPAMLGKQQELSAEAIAELPLLQQTT
RPYAWRQWFNSQQLNIPRDMTGPRYELFSMLAQAAMHDMGIALIPPFLIQ
RELAEKRLVIANPQALSSIKAYYLMIPERKVESASLRAFRDWLVNQANSY
NLEK
>PFL_2270 glcC, glc operon transcriptional activator
MQDTQAGRRPQVADLVCARIERLIVDGVFKTGQLLPSERRLTAKLGVSRT
ALREGLKLLRARGIIDTRQGRGSQVAQLSAPAAQSPLMHLFSSQPRTLYD
LLEVRSLLEGESARLAALRGTEADFVLIERAYQALLQAHEQALEPAALAR
LDHAFHLAICEASHNPVLVQTLGSLTDLLLNSVFASVNNLYHRPAPKRQI
DRQHARLYNAVTGRLPEQARKAAVAHIQGIARNLRDIEDEEQRLVRATLR
LQGWE
>PFL_4869 glpR, glycerol-3-phosphate regulon repressor
MNLPPRQQQILDLVRERGYVSIEELAQLFVVTPQTIRRDINQLAEANLLR
RYHGGAAYDSSVENTAYAMRADQMRDEKQRIGEAVAAQIPDHASLFINIG
TTTESIARALLNHSHLKIITNNLHVASMLSAKDDFDVLLTGGNVRRDGGV
VGQASVDFINQFKVDFALVGISGIDEDGSLLDFDYQEVRVSQAIIANARQ
VILAADSSKFGRNAMIRLGPISLIDCLVTDQQPVPALTQLLNQHKIRLEV
V
>PFL_4620 gltR, DNA-binding response regulator GltR
MSSVSKSILLVDDDQEIRELLETYLSRCGFQVRSTADGAGFRLALNEAPS
DLVILDVMLPDEDGFSLCRWIRQHPKRSQVPIIMLTASSDEADRVIGLEL
GADDYLGKPFSPRELQARIKALLRRVQFTQERVVGEVLCFDEWRLDVISH
RLFHNDGEEVILSGADFALLKLFLDHPQEILDRDTIGNATRGRDLMPLDR
IVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAANVVAGSGH
>PFL_4581 gntR, transcriptional regulator GntR
MTTHKNDKNTRTTGRPTLNEVARLAGVSPITASRALRGVSSVATELVEKV
QKAAQELNYVVNSAARALASAQSQSVVVLVPSLSNLLFIETLEAIHQVLR
PKGFEVLIGNCHYSRDEEENLLRNYMTYQPRGLLLTGFDRTESARRMIEA
NNIPCVYMMDLDSGAGLNCVGFSQLNAGETAAQHLISRGRKHLAYVGAQL
DQRTLLRGEGFRRALQQAGLYNPDLELLTPRPSSVGLGAELFLQLMQSQP
QVDAIFFGNDDLAQGALLEAMRCGIKVPEQVAVLGFNDLPSSEHMVPRLS
SISTPREAIGRRAAEQMLTLLAGNSVAEPVVDMGFELRVREST
>PFL_0832 greA, transcription elongation factor GreA
MNKYPMTVQGARALEEEHAHLTKVVRPKLSQDIGTARELGDLKENAEYHA
AREQQGMVEARIRDIEGRLQNSVVIDVTTIPHTGKVIFGTTVEIANVETD
ESVTYQIVGEDEADIKLGKISVGSPIARALIAKEEGDVVAVKTPGGVIEY
EIVEVRHI
>PFL_4281 greB, transcription elongation factor GreB
MSTKLITQDGYDALKQELDYLWREKRPDITQKVTWAASLGDRSENADYQY
NKKLLREIDRRVRYIRKRLEDMKVVSYAPEQEGRVFFGAWVEVENEAAEI
KRFRIVGYDEIYLRKDYISIDSPMARALLKKEVGDEAVVHTPAGETCWWI
NQIDYVK
>PFL_5342 greB, transcription elongation factor GreB
MRPGPIVRRRSLSGNRPGEKPATMVHPPPFKEKTVSRAFVNEDQAAQAEQ
PVERQISAQPNYVTPQGLAELQARVALLHSQHSEQNDLGDDADKQRMAEL
ERDLRYFTQRLHSAQVVTTANSTDKVQIGSRVTFADEQDRQQSVQLVGED
QADAAKGLINWASPLGRALLGAQPGDEVLWQRPAGNQLIEIIRIEPA
>PFL_4611 hexR, transcriptional regulator HexR
MDRVRNLLEQIQNRLEELNKAERKVAEVILLNPQQATRFSIAALAQAASV
SEPTVNRFCRSFGVSGYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQ
KIFGSAIASLDSACQALDPNLISKAVDLLIQARQIHFFGLGASAPVALDA
QHKFFRFNLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVAR
IARENGASVLGLTAENSPLAKASTLSLNIPLPEDTDIYMPMTSRIIQLTV
LDVLATGMTLRRGVDFQPHLRKIKESLNASRYPVGDEFN
>PFL_3369 hpaA, 4-hydroxyphenylacetate catabolism regulatory protein HpaA
MNPRQPIPNINIGQVYDQRYADAQVHYDKLSNLAGFFGRNMPVHRHDRFF
QVHYVQSGAVRVYLDDQQYLESGPMFFLTPPTIPHAFVTEADSEGHVLTV
RQQLVWELIGADPALAPAPQVPPVCVALARLGPQFAGEVRRLEGLFHELQ
REIAGQGPGREPALEALTRLLMISLLRLSANSLTARPARHEDLQIFHRFN
ELIEARYLEHWPLGRYASSLGVTEARLNDVCRRIADLPSKRLVHERVMQE
SKRLLLFTGSSINEICYQLGFKDPAYFSRFFQRYAKTAPGEYRLRQGQAP
APGANAPGA
>PFL_0399 hutC, histidine utilization repressor
MPTPPAKSPLAAHLGDSPAPLYARVKQMITQQIESGNWPPHYRVPSESEL
VNQLGFSRMTINRALREMTAEGMLVRMQGVGTFVAEPKSQSALFEVHNIA
DEIASRGHRHTCQVITLGEEAAGSERALALDMREGQKVFHSLIVHFENDI
PVQIEDRFVNALVAPEYLKQDFTLQTPYAYLSQVAPLTEGEHVVEAILAE
AEECRLLQIERGEPCLLIRRRTWSGRQPVTAARLIHPGSRHRLEGRFHK
>PFL_4823 iciA, chromosome initiation inhibitor
MFDYKLLSALAAVIEQAGFERAAQVLGLSQSAISQRIKLLEARVGQPVLV
RVTPPAPTEIGRRLLNHVQQVRLLERDLQSLVPALDEEGLPERLRIALNA
DSLATWWAGAVGDFCAEHHLLLDLVVEDQTVGLKRMRAGEVAACVCASER
PVAGARSLLLGAMRYRAMASPEFIVRHFPQGVRAEQLPRTPALVFGPDDF
LQHRYLASLGVDGAFEHHLCPSSEGFIRLTEAGLGWGLVPELQVREQLER
GLLLELLPDKPIDVPLYWHHWRNGGQLLGLLTEHLARLSAQWLVPWEQP
>PFL_4966 iscR, iron-sulfur cluster assembly transcription factor IscR
MRLTTKGRYAVTAMLDLALHAQHGPVSLADISERQGISLSYLEQLFAKLR
RSNLVSSVRGPGGGYQLSRDMQGIQVAQVIDAVNESVDATKCQGLGDCHA
GDTCLTHHLWCDLSLQIHEFLSGISLADLVTRREVQEVAQRQDQRRCNGK
APRLDKIEASAVE
>PFL_4569 kdpE, KDP operon transcriptional regulatory protein KdpE
MSSARILIVEDEANIRRFVGIALEDEGFQVFEADSVKRALIHAASRQPDL
VIVDLGLPDGDGKQLISELRGWLAVPILVLSARDREDEKVAALDAGADDY
LVKPFGVPELLARIRAQLRRHGQSGTAAATSKVAFGAIEVDLATHEVRRE
GLPVHLTPIEYRLLCALIRGQSRVLTHRQLLLEVWGLDYVDRAHYLRVHM
AHLRQKLEADPAQPQHLITELQVGYRLVGL
>PFL_4293 kdpE, KDP operon transcriptional regulatory protein KdpE
MSQTATILVIDDEPQIRKFLRISLASQGYKVIEAGTGTEGLAQAALNKPD
LLVLDLGLPDMDGQQVLREFREWSAVPVLVLSVRASELQKVEALDGGAND
YVTKPFGIQEFLARIRALLRQAPSGEVQEAALQVGPLTVDLAYRRVLLDG
VEVALTRKEYAVLAQLARHPGRVITQQQLLKDIWGPTHTEDSHYLRIVVG
HLRQKLADDPTRPRFIVTEAGVGYRLLGADS
>PFL_3700 lexA, LexA repressor
MTTLSPRRSAILTFIRERIADHGQPPSLAEISQAFGFASRSVARKHVLAL
TEAGFIEVNPHQARGIRLLNQPRRPELLEIPVLGRVAAGAPIGVDADIHG
QLLLDPGMFSRTPDYLLRVQGDSMIDDGIFDGDLVAVRRSSEVRNGQTVI
ARLDGEVTIKRFERKGQGIRLLPRNPAYQPIEVTADHELFIEGVFCGLVR
QG
>PFL_1949 lexA, LexA repressor
MLKLTPRQAEILAFIKRCLEDNGYPPTRAEIAQELGFKSPNAAEEHLKAL
ARKGAIEMTPGASRGIRIPGFEAKADDTLPIIGRVAAGAPILAQQHIEES
CNINPTFFHPRADYLLRVHGMSMKDIGIFDGDLLAVHTTREARNGQVVVA
RIGDEVTVKRFKREGSKVWLIAENPEFAPIEVNLKDQDLVIEGLSVGVIR
R
>PFL_6039 lrp, leucine-responsive regulatory protein
MRTNHQTRRALDKIDRNILRILQADGRISFTELGERVGLSTTPCTERVRR
LEREGIIMGYNARLNPQHLKGSLLVFVEISLDYKSGDTFEEFRRAVLKLP
HVLECHLVSGDFDYLVKARISEMASYRKLLGDILLKLPHVRESKSYIVME
EVKESLSLPIPD
>PFL_3233 mexT, transcriptional regulator MexT
MNRNDLRRVDLNLLIVFETLMHERSVTRAAEKLFLGQPAISAALSRLRNL
FDDPLFVRTGRSMEPSARAVEIFALLSPALDSISTAVSRAAEFDPATSTA
VFRIGLSDDVEFALLPMLLKRLRAEAPGIVLVVRRANYLLMPALLASGEI
SIGVSYTADLPANAKRKVLRRSLPKLLRADTVPGPLTLDDFCARPHALVS
FAGDLSGFIDEELEKLGRKRHVVLAVPQFNGLSTLLAGTDILATVPDYTA
DALTAAGGVRAEDPPLPVRSFELHMAWRGSQDNDPGERWLRSRIQMFFGD
PDSL
>PFL_1954 mfd, transcription-repair coupling factor
MPVLRLPLLPAAAGKQHWGNLPGAALSLAIAEAASAAKRFTLLLTADSQS
ADRLEQELSFFAPDLPVLHFPDWETLPYDLFSPHQDIISQRIASLYRLPE
LEHGVLVVPITTALHRLAPTQFLLGSSLVLDVGQKLDVEQMRTRLEASGY
RYVDTVYEHGEFTVRGALIDLFPMGSKLPYRIDLFDDEIETLRTFDPENQ
RSIDKVDSVRLLPAKEFPLQKEAVTRFKARFRERFDVDFRRCPIFQDLSS
GITPAGIEYYLPLFFEETSTLFDYLPQDTQVFSLPGIEQAAENFWNDVRN
RYEERRVDPSRPLLPPAELFLPVEDCFARLKNWPRVVASQQDIETGVGRE
RFPAHELPNLAIEAKANQPLAALSGFLDEFPGRVLFTAESAGRREVLLEL
LERLKLRPKTVDSWPDFVASKERLAITIAPLDEGLVLDDPALALVAESPL
FGQRVMQRRRREKRADANNDAVIKNLTELREGAPVVHIDHGVGRYLGLAT
LEIDNQAAEFLTLEYAEGAKLYVPVANLHLIARYTGSDDALAPLHRLGSE
AWQKAKRKAAEQVRDVAAELLDIYARRAAREGYAFADPKADYATFSAGFP
FEETPDQQSTIEAVREDMLSGKPMDRLVCGDVGFGKTEVAMRAAFIAVHG
GKQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSTKEVNAAVAD
LAEGKIDIVIGTHKLLQDDVKIKNLGLVIIDEEHRFGVRQKEQLKALRSE
VDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKSTV
KEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRER
ELEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIIIERADKFGLAQLHQ
LRGRVGRSHHQAYAYLLTPPRQQITPDAEKRLEAIANTQDLGAGFVLATN
DLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIRKGEQPNLDQPL
GGGPEINLRLPALIPEDYLPDVHARLILYKRIASATDEDGLKDLQVEMID
RFGLLPEPTKNLIRLTLLKLQAEQLGIKKVDGGPQGGRIEFAADTPVDPL
ALIKLIQGQPKRYKFEGATLFKFMVPMERPEERFNTLEALFERLTPKSA
>PFL_3254 mltR, transcriptional activator MltR
MSRPGKITDPSYELMDDHNGLSIIYRQHGFPCPLVRWHFHKEYELHLIVA
SSGKVFIGDYIGNFYPQTLFLTGPNLPHNWISQVAEDEVVAKRDMLVNFT
DELFDSGSQVFAELKNLSPLLERAQYGIEFRCPQTIAQALPLMQRIADSS
GITRLGHFLILMELLAACDDYQLLSGATSVQLADEHSVDRTNRAVDYIFA
HYARELPLEEVADYLGMKPSYFSRVFKQATGRCFVEFVNRLRISKSCELL
ADGDKPVTDVCFESGFNNISNFNRRFQQLKGMTPSHYRRLAVQRLTEQNL
G
>PFL_0843 nusA, N utilization substance protein A
MSKEVLLVVESVSNEKGVPASVIFEALELALATATKKRFEDEVDLRVEIN
RHTGSYETFRRWTVVEEADLDDPAVETWLSKARETHPDAKVGDVIEEKIE
SIEFGRIAAQTAKQVIVQKVREAERAQVVDAYRERLGEIISGTVKKVTRD
NVIVDLGNNAEALLAREDIISRETFRVGVRLRALLKEIRTENRGPQLILS
RTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAVRSKDKRIDPQ
GACIGMRGSRVQAVSGELGGERVDIVLWDENPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQ
QAETGDILRNFIDELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGF
DEDIVNELRARAKDRLLTKAIATEEKLADAHPAEDLLSLEGMDKDLAMEL
AVRGVITREDLAEQSIDDLLDIDGIDDDRAGKLIMAARAHWFE
>PFL_5594 nusG, transcription termination/antitermination factor NusG
MAKRWYVVHAYSGYEKHVMRSLIERVKLAGMEDGFGEILVPTEEVVEMRN
GQKRKSERKFFPGYVLVQMDMNEGTWHLVKDTPRVMGFIGGTADKPAPIT
DKEAEAILRRVADGSDKPKPKTLFEPGEVVRVTDGPFADFNGTVEEVNYE
KSRIQVAVLIFGRSTPVELEFSQVEKA
>PFL_0276 ompR, DNA-binding response regulator OmpR
MSSTVQTAEGEKILIVDDDPGLSSLLERFFVSKGYRARAVPNTEQMDRLL
GREVFNLVVLDLMLPGEDGLTACRRLRSANNQIPIIMLTAKGDELSRIKG
LELGADDYLAKPFNPDELMARVKAVLRRQSAPVPGAPGSEDESVTFGDYE
LSLATRELKRGNEVHMLTTGEFAVLKALVMNARQPLTRDKLMNLARGREW
DALERSIDVQISRLRRMIEPDPSKPRYIQTVWGVGYVFVPDGTATK
>PFL_6070 oxyR, oxidative stress regulatory protein OxyR
MTLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFER
SKSAVRLTPVGETIVAQAQKVLEQAQGIRELAQAGKNQLTAPLKVGAIYT
VGPYLFPHLIPQLHRVAPQMPLYIEENFTHVLRDKLRNGELDAIIIALPF
NEADVLTLPLYDEPFYVLMPSGHPWTKKETIDANLLNDKSLLLLGEGHCF
RDQVLEACPTLTKGNDGAKHTTVESSSLETIRHMVASGLGISILPLSAVD
SHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILADSIRLCSVA
KPPAAS
>PFL_3128 paaX, phenylacetic acid degradation operon negative regulatory protein PaaX
MSSLAPLNHLIKRFQEQTPIRASSLIITLYGDAIEPHGGTVWLGSLIQLL
EPMGINERLIRTSIFRLSKEGWLSAEKVGRRSYYSLTLTGRRRFDKAFKR
VYSAGVPAWDGAWCLVMLSQLSVELRKQVREELEWQGFGAMSPVLLACPR
SDRADINATLAELGAQEDTIVFETTPQDVLGSRALRLQVRESWNIDELAA
HYSEFIQLFRPLWQALREQEQLQPQDCFLARLLLIHEYRKLLLRDPQLPD
ELLPGDWEGRAARQLCRNIYRLIQARAEEWLATALENADGPLPDVGESYY
RRFGGLV
>PFL_6223 parB, chromosome partitioning protein ParB
MAVKKRGLGRGLDALLSGPTVSALEEQAVQADQRELQHLPLDLIQRGKYQ
PRRDMDPQALEELANSIKSQGVMQPIVVRPIGGGRFEIIAGERRWRASQQ
AGQETIPAMVRDVPDETAIAMALIENIQREDLNPIEEAVALQRLQQEFQL
TQQQVAEAVGKSRVSVANLLRLIALPEVIKTMLSHGDLEMGHARALLGLP
ENQQVEGARHVVARGLTVRQTEALVRQWLSGKQEPAEPVKPDPDIARLEQ
RLAERLGSAVQIRHGKKGKGQLVIGYNSLDELQGVLAHIR
>PFL_5397 pcaQ, pca operon transcriptional activator PcaQ
MNIDTRIKFRHLVCFLEMARQGSLARAADVLAVSQPAMSKTLKELEALLE
TRLFARSKAGLSLTEAGRAFLRYAGPSVQALREGVSSLRGGEYAAGLVRI
GVLSTVESLLLPEVMRRLHQRHSALTVSVLTGPSAYLLSQLRVGDLDLVV
GRMTESPEIHGLSFEHLYSESMTLVARPQHPLATGPLDRDAVSAYPLVLP
LAGTSIRKHADSLFIQCGIAPSQQRLETLSVALSRRYTLSSDALWIAPLD
AVRLDLANGELRELDLGLREPGGSVGISSNASLPLSLAAQWAVEVLREVG
LAYREGSYP
>PFL_1315 pcaR, Pca regulon regulatory protein PcaR
MCFFANTACNTEEFRRREPEMNDQMRNSFTSVAPPIVASAAKRIQALTGD
PDFMTSLARGLAVVQAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLIKL
GYATTDGRTYSLLPKVLTLGHAYLSSTPLAVSAQPYLDRMSEQLHEACNM
ATLEGDDILYIARSATTQRLISVDLSVGGRLPAYCTSMGRILLAALDDSS
LHEYLDHADLQAKTSRTLHTPEALLECLQQVRQQGWCIVDQELEQGLRSI
AVPVYDASGQVLAALNVSTHAGRVSRAELEQRFLPGLLSASRDLSAQLFA
>PFL_2665 pfeR, transcriptional activator PfeR
MTPNLLLVEDDARLRDDLDLHFRQRGFTVTTCTDGRQGLAAVRAGHFDLV
LLDIMLPGMDGLALLETLRQEQGTPVMLMSALGAEQDRITGFTRGADDYL
PKPFSLAELDARADALLRRMARVQQLQATRQDPHLSFDDQAQDVLHQGRA
AGLTGSEYRLLATLREHPGETLSKPFLYQHVLHRIYTRLDRGLDVHVCNL
RRKLADLGVQHLQIQAVRGAGYILVEAERH
>PFL_4193 pfiT, transcriptional regulator I2
MDEQKAQQVVRELIASGQVTDPESARGKLLQTAAHLFRNKGYERTTVRDL
ASAVGIQSGSIFHHFKSKDDILRAVMQETIHYNTALMRAELAEAGSVRER
VLALIRCELQSIMGGSGEAMAVLVYEWRSLSPEGQAAVLALRDIYEQIWL
QVLGEAKEAGFIKGDVFITRRFLTGALSWTTTWFRAEGSMTLEQLAQEAL
LLVLKDH
>PFL_0431 phaD, transcriptional regulator PhaD
MKTRDRILECALQLFNQKGEPNVSTMEVANEMGISPGNLYYHFHGKEPLV
LGLFERFQNELTPLLDPPSDVQLAAEDYWLFLHLIVERLAHYRFLFQDLS
NLAGRLPKLAKGIRNLLNALKRTLASLLARLKAQGQLVSGTQALGQLVEQ
ITMTLLFSLDYQRILDREGEVRLVVYQIMMLVAPHLLPPAKMATEQMALR
YLDEQG
>PFL_1612 phhR, sigma-54 dependent transcriptional regulator PhhR
MRIKVHCQNRIGILRDILNLLVEYGINVARGEVGGEHGNAIYLHCPNLIN
LQFQALRPKFESIAGVFGVKRVGLMPSERRHMELNALLGALEFPVLSIDM
GGSIVAANRAAAQLLGVRVDEVPGIPLSRYAEDFDLPELVRANQSRINGL
RVKVRGDVFLADIAPLQSEHDDSEAMAGAVLTLHRADRVGERIYNVRKQE
LRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGTGKELLARACHL
ASPRGQSPLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTA
GGTLFLDGVGEMSPRLQVKLLRFLQDGCFRRVGSDEEVYLDVRVICATQV
DLSELCVRGEFRQDLYHRLNVLSLHIPPLRECLDGLTPLVEHFLDQASRQ
IGCPLPRLAPAAMERLSHYHWPGNVRQLENVLFQAVSLCDGGTVKTEHIR
LPDYGARQPLGDFSLEGGLEQIVGRFEKAVLESLYAEHPSSRQLGKRLGV
SHTTIANKLREYEVGKNAGDNP
>PFL_5953 phlF, transcriptional repressor PhlF
MARTPSRSSIGSLRSPHTHKAILTSTIEILKECGYSGLSIESVARRAGAS
KPTIYRWWTNKAALIAEVYENESEQVRKFPDLGSFKADLDFLLRNLWKVW
RETICGEAFRCVIAEAQLDPATLTQLKDQFMERRREMPKKLVENAISNGE
LPKDTNRELLLDMIFGFCWYRLLTEQLTVEQDIEEFTSLLINGVCPGTQR
>PFL_6108 phoB, phosphate regulon transcriptional regulatory protein PhoB
MVGRSILIVDDEAPIREMIAVALEMAGYDCMEAENSQQAHAIIVDRKPDL
ILLDWMLPGTSGIELARRLKRDELTGDIPIIMLTAKGEEDNKIQGLEVGA
DDYITKPFSPRELVARLKAVLRRAGPTDGEAPIEVGGLLLDPISHRVTID
GKPAEMGPTEYRLLQFFMTHQERAYTRGQLLDQVWGGNVYVEERTVDVHI
RRLRKALGDAYENLVQTVRGTGYRFSTKA
>PFL_4470 phoP, DNA-binding response regulator PhoP
MKLLVVEDEALLRHHLQTRLTDSGHVVESVANAEEALYQTEQFNHDLAVI
DLGLPGMGGLDLIRQLRNRGKTFPILILTARGNWQDKVEGLAAGADDYVV
KPFQFEELDARLNALLRRSSGFTQSTIIAGPLLLDLNRKQASLDEQPLAL
TAYEYRILEYLMRHHQQVVAKDRLMEQLYPDDDERDPNVIEVLVGRLRRK
LEGPSGFKPIDTVRGLGYLFNERCR
>PFL_2785 pltR, transcriptional regulator PltR
MKALGVVNDIDLYISVTKTGSFSETGRLLGIPPSSVMRRINSLEKELETC
LFNRSTKCLILTETGLLFLEHAKNISRCIGHARSEVKEHTASTLGVLKVS
APVAFGRRHVAPLLSRILNHHPGLKIEFSLNDKALDPSIDNVDICIKLGI
LPDSNLIPTKLADMRRVLCASPEYIRQHGCPQTLEDLYQHACLIHSTCSN
FSLTWQFKVDGLLKKLMPSSRLSVNSSELLVDGALQGIGIIHAPTWLVHE
QIASGQLVSLLDEYCEADPQQGAIYALRARSSVVPAKTRLFINELKRSIG
STPYWDLPFEKEIPQTLATLHFDTAMHSALSRATTLQDKSQTS
>PFL_2794 pltZ, transcriptional regulator PltZ
MKQPPAQTTRNIMNTRRRTSRSDGEHTKIRILEVAARLFAQHGYANTASK
LICEEAGADLAAINYHFGSREALYKAVLIEGHKQLVSFEALSQLAQSEEP
ALIKLDSFIDAIVTRVLDEQSWQSKVCAREILAPTVHFTSLVQEEVMPKF
RLLEALISEITGFPIGDPALARCTISIIAPCLMLAVIDRQQPSPLQAVLQ
HDANALKAHFKLFARSGLAAIAQ
>PFL_5171 pobR, transcriptional regulator PobR
MKASRSSIPVFKLYGENQAWPTPDLLHCESIPKRSSLHHWEIKPHRHADL
YQLLYVQSGQALVEVEGRREDVREATIQVVPPLMVHGFQFSENIEGYVLT
LGAPLVAQLESQLGAPLAVLAAAGRYPVGRDRQRLNSLFKTLLEEYEGSA
SARDLLLHSLVNVLLVWISRRRQQNVTPSNRSERNQQLLGHFIKLVEQHY
QEHPTVEALAHRIGLSSVHLNTLCRELAGQTALQIIHQRLMLEAKRNLIY
TNISISQLSDNLGFSDPTYFSRFFKRLSGQTPNAFRQGTGHTRQGG
>PFL_3948 prtR, transmembrane regulator PrtR
MISLPPSDSDLHAYVDHQLSEQDRRLLEHYLASHPQVAARVQAWQQDAQH
LRAALGGALLQPANPALDPVQIRARLKQRSLRRLASAAVLLVAVGVGGLS
GWQARELTLAGSSVLPMTDALQAYRLFAEQGMLPADFKVQGNQSMQTWLD
RYFTQASPLPDLQGAGFRAVSGRLLSTEQGPAAMVLYEDREGRKVSFYIR
PPGPQNKLLPPGSRREGPLQAQYWSGQGYNYAMVGPAEIPL
>PFL_1950 psrA, transcriptional regulator, TetR family
MAQSETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFGSKK
ALIQAVFSRFLGPFCISLDRELERRQSRPENKPSLEELLEILVEQALVVQ
PRSGNDLSIFMRLLGLAFSQSQGHLRRYLEDMYGKVFRRYMLLVNEAAPR
IPPIELFWRVHFMLGAAAFSMSGIKALRAIAETDFGVNTSIEQVMRLMVP
FLAAGMRAETGVTDEAMASAQLKPRSKSAPAAAKA
>PFL_2104 rbsR, ribose operon repressor
MATIKDVAALAGISYTTVSHVLNKTRPVSEEVRVKVEAAIARLDYVPSAV
ARSLKAKTTATIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDN
PQKQRNYLRVLLEKRIDGLIVTSAGGDSGLAQGLAGVRTPMVIVDRGLEG
VNADLVRIDHQHGAYLATRHLLELGHRDIACIGGPGNTSVAQMRLAGFQQ
ALREAGVEAPAERILESDFSSTGGYRAAAQLLDGGQPPSAIFAGNDMMGI
GVLRAAAERNIRVPSELSVIGFDDILMSRYVYPALTTVGQSILQLGETAA
ELLLRRIACRELPVDQRIVTPNIVLRESTAPLGGAFAEYR
>PFL_6071 recG, ATP-dependent DNA helicase RecG
MTELSKVPVTALKGVGESMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVP
IGALRPGQDAVIEGTVSGADVVMGKRRSLLVRLQDGTGGLSLRFYHFSNA
QKDGLKRGTRVRCYGEARPGASGLEIYHPEYRAISGDEPPPVDQTLTPIY
PLTEGLTQQRLRLLCQQSLALLGPRSLPDWLPEELARDYQLAPLDDAIRY
LHHPPADADVDELALGHHWAQHRLAFEELLTHQLSQQRLRDSLRSQRAPV
LPLARKLPVKYLKNLGFAPTGAQQRVGNEIAYDLSQPEPMLRLIQGDVGA
GKTVVAALAALQALEAGYQVALMAPTEILAEQHFITFKRWLEPLGLEVAW
LAGKLKGKARSAALEQIAGGAPMVVGTHALFQDEVQFKNLALVIIDEQHR
FGVQQRLALRQKGVGGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDEL
PPGRTPVNTVLVTDSRRIEVIERVRAACAEGRQAYWVCTLIEESEELTCQ
AAETTFEDLSSALGELRVGLIHGRMKAPEKAAVMAEFKAGNLQLLVATTV
IEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPL
SQIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTGLLQFKVADLM
RDADLLPAVRDAAQALLERWPDHVSPLLERWLRHGQQYGQV
>PFL_4446 relA, GTP pyrophosphokinase
MVQVRAHQPINTDGSINLEAWLDHTVSVDMALDREALKEACEFAREAELQ
HIATKNLSPEDVSSFSTGLEIAEILADLKLDQDSLVAAVLYRGVREGQIQ
LPAVSQRFGPVVTKLIDGVLRMAAITASLSPRQSLVLGTQAQVENLRKML
VAMVDDVRVALIKLAERTCAIRAVKSADEEKRNRVAREVFDIYAPLAHRL
GIGHIKWELEDLSFRYLEPEQYKQIAKLLHERRLDRERFISDVMNQLQNE
LKATGVNADISGRAKHIYSIWRKMQRKGLEFSQIYDVRAVRVLVPEMRDC
YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIR
THAMHEEAELGVCAHWKYKGTDVKSGSNHYEEKISWLRQVLEWHEELGDI
GGLAEQLRVDIEPDRVYIFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCR
GAKINGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNPNLGYVTTSRARA
KIVHWFKLQARDQNVAAGKTLLERELSRLGLPQVDFDKLAEKANMKIAED
MFAALGAGDLRLAQLVNLAQQLVEPERGNEQLELIPRKAAGYKPGKRGDI
QIQGVGNLMTQMAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLAGR
EPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAV
NTRSNKEDNTALMSLTIEIPGLDALGRLLGRISQLPNIIETRRNRTP
>PFL_5981 rho, transcription termination factor Rho
MNLTELKQKPITELLELAEQMGIENMARSRKQDVIFSLLKKHAKSGEEIS
GDGVLEILQDGFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGK
IRPPKEGERYFALLKVDTINYDRPENAKNKILFENLTPLFPTVRMKMEAG
NGSTEDLTGRVIDLCAPIGKGQRGLIVAPPKAGKTIMLQNIASNITRNNP
EVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHVQVAEMVIEKA
KRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRKIA
EKRVFPAININRSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLV
DKLKQTKTNDEFFLSMKRK
>PFL_6009 rnk, regulator of nucleoside diphosphate kinase
MSTAPSIILTRLDVQRLERLIDSLDDSLPGVIALQTELDRAETLVGHDEV
PAGVVTMNSRVHCREESSGKDYHLTLVYPQDANADEGKISILAPVGSALL
GLQVGQYIDWPAPGGKTLKLTLLEVEYQPEAAGDYHL
>PFL_5589 rpoB, DNA-directed RNA polymerase, beta subunit
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYREFLQAGATKDQFRD
VGLHAAFKSVFPIISYSGNAALEYVGYRLGEPAFDVKECVLRGVTYAVPL
RVKVRLIIFDKESSNKAIKDIKEQEVYMGEIPLMTENGTFVINGTERVIV
SQLHRSPGVFFDHDRGKTHSSGKLLYSARIIPYRGSWLDFEFDPKDCVFV
RIDRRRKLPASVLLRALGYTTEEVLDAFYTTNVFHVKGESLSLELVPQRL
RGEIAVLDIQDDKGKVIVEQGRRITARHINQLEKAGIKELDVPLDYVLGR
TTAKAIVHPATGEILAECNTELNTEILAKIAKAQVVRIETLYTNDIDCGP
FVSDTLKIDSTSNQLEALVEIYRMMRPGEPPTKDAAETLFNNLFFSPERY
DLSAVGRMKFNRRIGRTEIEGSGVLCKEDIVAVLKTLVDIRNGKGIVDDI
DHLGNRRVRCVGEMAENQFRVGLVRVERAVKERLSMAESEGLMPQDLINA
KPVAAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGF
EVRDVHPTHYGRVCPIETPEGPNIGLINSLAAYARTNQYGFLESPYRVVK
DALVTDEIVFLSAIEEADHVIAQASATMNDKGQLVDELVAVRHLNEFTVK
APEDVTLMDVSPKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRA
DKPLVGTGMERNVARDSGVCVVARRGGVIDSVDASRIVVRVADDEVETGE
AGVDIYNLTKYTRSNQNTCINQRPLVSKGDRVQRSDIMADGPSTDMGELA
LGQNMRIAFMAWNGFNFEDSICLSERVVQEDRFTTIHIQELTCVARDTKL
GPEEITADIPNVGEAALNKLDEAGIVYVGAEVGAGDILVGKVTPKGETQL
TPEEKLLRAIFGEKASDVKDTSLRVPTGTKGTVIDVQVFTRDGVERDARA
LSIEKSQLDEIRKDLNEEFRIVEGATFERLRSALVGHKAEGGAGLKKGQE
ITDEVLDGLEHGQWFKLRMAEDALNEQLEKAQAYIVDRRRLLDDKFEDKK
RKLQQGDDLAPGVLKIVKVYLAIRRRIQPGDKMAGRHGNKGVVSVIMPVE
DMPHDANGTPVDVVLNPLGVPSRMNVGQILETHLGLAAKGLGEKINRMVE
EQRKVAELRTFLDEIYNQIGGRNEDLDSFSDQEILDLANNLRGGVPMATP
VFDGAKESEIKAMLKLADLPESGQMQLTDGRTGNKFERPVTVGYMYMLKL
NHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLIKEIRSLGI
DIDLETE
>PFL_5588 rpoC, DNA-directed RNA polymerase, beta' subunit
MKDLLNLLKNQGQVEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFK
PERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRE
RMAHIELASPVAHIWFLKSLPSRIGLLMDMTLRDIERVLYFESYVVIDPG
MTTLEKGQLLNDEQYFEALEEFGDDFDARMGAEAVRELLHAIDLEHEIGR
LREEIPQTNSETKIKKLSKRLKLMEAFQGSGNLPEWMVLTVLPVLPPDLR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLSAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS
GRSVITVGPTLRLHQCGLPKKMALELFKPFIFGKLEMRGLATTIKAAKKM
VERELPEVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPII
VPSQDVVLGLYYMTREAINAKGEGRVFADLQEVDRVFRAGEAALHAKIKV
RISETVNDRDGGSVSATRIVDTTVGRALLFQVVPKGLSFDVVNLPMKKKA
ISKLINQCYRVVGLKETVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEK
ARIIGAATDEVKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMAN
LSKEKVIDRNGDEVEQESFNSMYMMADSGARGSAAQIRQLAGMRGLMAKP
DGSIIETPITANFREGLSVLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVAQDLVVTEIDCGTEHGLLMTPHIEGGDVVEPLGERVLGRVIARDVFK
PGTEDVIVPAGTLVDEKWVEFIELNSIDEVIVRSPISCETRYGICAKCYG
RDLARGHQVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADSV
QVKNGGTVRLHNLKHVERVDGHLVAVSRSGELAIADDFGRERERYKLPYG
AVISVKEGDKVDAGAIVAKWDPHTHPIVTEMKGTVTYVGMEEGITIKRQT
DELTGMTNIEVLDVKDRPAAGKDIRPAVKMVGMDGKDLLLPGTDVPAQYF
LPANALVGVADGAQIAIGDVIARIPQETSKTRDITGGLPRVADLFEARRP
KEASILAEVSGTIAFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNVFE
GEQVNRGEVISDGPSDPHDILRLLGVSALAKYIVNEIQDVYRLQGVKIND
KHIETILRQMLRKVEIAESGDSSFIKGDQMELTHVLVENERLSTEDKFVA
KFTRVLLGITKASLSTESFISAASFQETTRVLTEAAVTGKRDYLRGLKEN
VVVGRLIPAGTGLAYHSERKRRRDADKPLRVSASEVEAALTEALNSSGN
>PFL_5663 rpoD, RNA polymerase sigma factor RpoD
MSGKAQQQSRLKELISRGREQGYLTYAEVNDHLPEDISDPEQVEDIIRMI
NDMGINVFESAPDADALLLAEADTDEAAAEEAAAALAAVETDIGRTTDPV
RMYMREMGTVELLTREGEIEIAKRIEEGIREVMGAIAHFPGTVDHILSEY
TRVTTEGGRLSDVLSGYIDPDDGITPPAAEVPPPVDTKTAKADDDSEDEE
AEATEDEEEAESGPDPVIAAQRFGAVADQMEVTRKALKKHGRENKQAIAE
MLALAELFMPIKLVPKQFEGLVERVRSALDRLRQQERAIMQLCVRDARMP
RADFLRQFPGNEVDESWTDALAKGKSKYAEAIARLQPDIIRCQQKLTALE
VETGLKIAEIKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRG
LQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQAR
TIRIPVHMIETINKLNRISRQMLQEMGREPTPEELGERMEMPEDKIRKVL
KIAKEPISMETPIGDDEDSHLGDFIEDSTMQSPIDVATVESLKEATREVL
SGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPTRSEHLRSFLDE
>PFL_4625 rpoE, RNA polymerase sigma-70 factor, ECF subfamily
MSQSHFNHVFLTQRISLLRTLERMVNNHSTAEDLLQETYLRVTRALSERP
ITHLEPFVFQTARNLALDHLRARRIQGRTLLEDVPPEVVENVAAPVSSAE
DAAHAEQMLERLNLSLGQLSPRQQQIFILSRLHGHSYQEIADELGVSLST
VQKELKLIMAICIGVAERLDGQ
>PFL_1448 rpoE, RNA polymerase sigma-H factor AlgT
MLTQEEDQQLVERVQRGDKRAFDLLVLKYQHKILGLIVRFVHDTHEAQDV
AQEAFIKAYRALGNFRGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVS
SEDAEFYDGDHGLKDLESPERALLRDEIEGTVHRTIQQLPEDLRTALTLR
EFDGLSYEDIASVMQCPVGTVRSRIFRAREAIDKALQPLLQET
>PFL_0915 rpoN, RNA polymerase sigma-54 factor
MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQ
EEGDDFDNSDPLADNTESKPNTEIQEPSYQETAPTVDNLEDGEWNERIPN
ELPVDTAWEDVYQTSASSLPSSDDDEWDFTTRTSAGESLQSHLLWQLNLA
PMSDTDRLIAVTLIDCINNQGYLDETLEEILEAFDPELDIELDEIEAVLH
RIQQFEPAGIGARNLGECLLLQLRQLPAKTPWLGEAQRLVSDYIDLLGSR
DYSQLMRRMKLKEDELRQVIELVQSLNPRPGSQIESSEAEYVVPDVIVRK
DNERWLVELNQESVPRLRVNAQYAGFVRRADTSADNTFMRNQLQEARWFI
KSLQSRNETLMKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHEST
ISRVTTQKFMHTPRGIYELKYFFSSHVSTSEGGECSSTAIRAIIKKLVAA
ENQKKPLSDSKIAGLLEAQGIQVARRTVAKYRESLGIAPSSERKRLM
>PFL_1207 rpoS, RNA polymerase sigma factor RpoS
MDSMSNNEGATPPSVRTKSKSSASLKQHKYIDYTRALDATQLYLNEIGFS
PLLSPEEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGLSLLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLP
IHVVKELNVYLRAARELTQKLDHEPSPEEIANLLEKPVAEVKRMLGLNER
VSSVDVSLGPDSDKTLLDTLTDDRPTDPCELLQDDDLSQSIDQWLSELTE
KQREVVVRRFGLRGHESSTLEDVGLEIGLTRERVRQIQVEGLKRLREILE
KNGLSSESLFQ
>PFL_2302 rtcR, sigma-54 dependent transcriptional regulator RtcR
MLINRLELIHGLDARDVSLAERVANDVRQVSPETEVRLHPMGLNNPWDFE
EVYGALHDFTSAYPFDTEREDYLVHITTGTHVAQICWFLLTEARYLPARL
IQTSPARRRDPDQHATGTHALIDLDLSRYDRIASRFAHKRLEGLAFLKSG
IATRNPAFNRSIEQIERVAVRSRAPMLLIGPTGAGKSFLARRIYELKRGR
HQVQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNAREGLLRAADGGM
LFLDEIGELGLDEQAMLLKAIEEKRFFPMGSDQEVQSDFLIIAGTHRDLR
GRVAQGLFREDLYARINLWTFNLPGLAGRREDIEPNIDFELERHAREQGQ
LVRFNLEARRRYLAFASSSEAAWLGNFRELSASITRMATLADSGRIDQAQ
AEEEIQRLRHAWGLESQEDELQKLLGDDVELDLFDRLQLKAVIAECRRAD
SLSEAGRRLFGVSRLGKANPNDADRLRKYLARFGLDWKQL
>PFL_1600 scpB, segregation and condensation protein B
MNLNEPRELAPLLEAFLLASGKPQSLERLFELFEEAERPDPAVFKKALAL
LGKSCEGRAFELKEVASGYRLQIREKFAPWVGRLWEERPQRYSRAMLETM
ALIAYRQPITRGEIEDVRGVAVNSHIVKTLLEREWIRVVGYRDVPGKPAM
FATTKAFLDHFNLKNLDDLPPLAELREIEAEPVLEFDDAPVPEHLQQLAD
ASAEPEEPKEETSFHTLLLELDSMEEGIKTDFEDLHRDGVVDPEQGGVQE
PVPDLPQEEARTESEFLADEPDEPDEPDEFPVEPEDRPPVEAEDDVLGVA
EARAKLLAAVAALEPATPQLSEEEAEALALAEAIENERRLLDD
>PFL_1875 sigX, sigma factor, ECF family
MNKTQSLSTRYDPRELSDEELVARSHTELFHVTRAYEELMRRYQRTLFNV
CARYLGNDRDADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITYNECITQ
YRKERRKRRLMDALSLDPLEEASEEKAPKPEEKGGLDRWLVHVNPIDREI
LVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLREKFAGIAET
>PFL_4160 soxR, redox-sensitive transcriptional activator SoxR
MIEPDSRHKELSVGQLSARSGVAVTALHFYETKGLIHSHRNAGNQRRYPR
SVLRRVSLIKVAQRLGIPLAEIGQALATLPADRAPTAADWQRLSEQWSRE
LDERIRQLSLLRERLNQCIGCGCLSMEGCPLRNYGDALGDAGPGARLLEP
DAATDTP
>PFL_6063 spoT, guanosine-3,5-bis(diphosphate)3-pyrophosphohydro lase
MPSIDALADRLSTYLGTDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPL
AVANILADMHMDHQSLMAAMLHDVIEDTGIAKEALSAQFGETVAELVDGV
SKLTQMNFETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVL
SGEKRRRIAKETLEIYAPIANRLGMHAIRIEFEDLGFKAMHPMRSARIYQ
AVKRARGNRKEIVNKIEESLSHCLAIDGIQGEVSGRQKHLYGIYKKMRGK
RRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKA
NGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPK
GTHARARQWVKGVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIME
LPKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAP
GARPNPAWLNFVVTGKARTHIRHALKLQRRSESISLGERLLNKVLNGFDS
SLEKVPAERIQAILQEYRLELIEDLLEDIGLGNRMAYVVARRLLGEGEQL
PSPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLDNCRN
ISEIRHNPEKCIQLSWAKDVTGEFNVELRVELEHQRGLIALLASSVNAAD
GNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITRMR
A
>PFL_1441 tctD, DNA-binding response regulator TctD
MRVLLVEDHLQLAESIAQALKSTGLTVDVLHDGVAADLALGSEEYAVAIL
DVGLPRMDGFEVLARLRARGKNLPVLMLTARSDVKDRVHGLNLGADDYLA
KPFELTELEARVKALLRRSVLGGERQQRCGVLAYDLDTRRFTLGEELLTL
TSREQAVLEALIARPGRVMSKEQLASQVFGLDEEASPDAIEIYVHRLRKK
LDGHAVAIVTFRGLGYLLESRDA
>PFL_4935 treR, trehalose operon repressor
MSKYNQIYSDLLASITTERLERGARLPSESELMDSYQASRGTVRKAIELL
QERGFAQKIHGKGTFVLSPNPIEFQLGGIVSFQETYPGLGDDVSTEVVEF
SQFPLEGPLRAHLQAEEGSLITRIKRVRRIDGKRVILDINHFVADLIPGL
DRQIAEQSIYAYIEQTLQLSISYAQRTIEASPRSKDDQQLLDLDGQSHVI
VVSNQTFLQDGRQFEYTESRHTLDKFYFSDVARR
>PFL_0038 trpI, transcriptional regulator TrpI
MSRDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGL
SLFVKEGRGLKLTDAGIRLRDASSEAFERLRDVCAELTQGSADAPFVLGC
SGSLLARWLIPRLGRLNADLPDLRLHLSAGEGDLDPRRPGLDALLVFAEP
PWPADMQVYELASERIGPVLSPRYAGYPRLRQAPAGVLASEALLHTTSRP
QAWPSWARRNDLNPETLKYGQGFEHLYYLLEAAVAGLGVAIAPQPLVAED
LLAGRLVAPWGFSDTPGQLALWLPKRAADGRARQLAQWLENELRQQL
>PFL_1333 ttgR, transcriptional regulator TtgR
MVRRTKEEAQETRSQILEAAEKAFYERGVARTTLADIAALAGVTRGAIYW
HFSNKADLVQAMLDSLREPLDEMAAASENVDEMDPLGCMRKLLIHLFHQV
ALDPKTRRINEILFHKCEFTDEMCDLRRQRRAASLDCNVHIELALRNAVN
RGQLPENLDAARAAITLHAFIDGILYQWLLAPDSFALHTEAERWIDIGLD
MLRLSPNLRH
>PFL_0607 ureG, urease accessory protein UreG
MNAQPLRVGIGGPVGSGKTALTLALCLALRERYNLAVVTNDIYTREDADF
LVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLDLIL
VESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLLVINK
IDLAPLVGASLEMMNSDTQRMRGGKPFVFSNQKTGQGLADIIAFIERQGL
LTAA
>PFL_0577 vacB, ribonuclease R
MADWQSLDPEAAREAEKYENPIPSRELILQHLADRGSPASREQLVEEFGL
TTEDQLEALRRRLRAMERDAQLIYTRRGTYAPVDKLDLILGRISGHRDGF
GFLVPDDGSDDLFMSPAQMRLVFDGDRALARVSGLDRRGRREGVIVEVVS
RAHESIVGRYFEEGGIGFVVADNPKIQQEVLVTPGRNANAKIGQFVEVKI
THWPTPRFQPQGDVVEVVGNYMAPGMEIDVALRTYDIPHVWPEAVLKEAG
KLKPEVEEKDKEKRIDLRDLPFVTIDGEDARDFDDAVFCEAKPGKLRLFG
GGWKLYVAIADVSSYVKIGSALDAEAQVRGNSVYFPERVIPMLPEQLSNG
LCSLNPKVDRLAMVCEMTISKSGEMTDYQFYEAVIHSKARLTYNKVSTML
EQPKTSEAKQLRGEYGDVLPHLKQLYALYKVLLGARHTRGAIDFETQETR
IIFGSERKIAEIRPTTRNDAHKLIEECMLAANVATAEFLKKHEIPALYRV
HDGPPPERLEKLRAFLGELGLSLHKGKDGPTPKDYQALLETIKDRPDYHL
IQTVMLRSLSQAVYSADNQGHFGLNYEAYTHFTSPIRRYPDLLTHRAIRS
VIHSKQDTPHVRRAGAMTIPKARIYPYDEATLEQLGEQCSMSERRADEAT
RDVVNWLKCEFMKDRVGESFPGVITAVTGFGLFVELTDIYVEGLVHVTAL
PGDYYHFDPVHHRLAGERTGRSFRLGDTVEVRVMRVDLDERKIDFEMAEK
TINAPIGRKKRGAADAPASKVVEEPAPAKAGRRSSAKEKAVEAYRPSDAA
AKNAEVRKSREMKRALLAEAKGGGKATSAGKSGKPAPSRAGEKPAKPSKH
RKGPPKAGSASGAKSGGARKPKAKS
>PFL_3473 vanR, transcriptional regulator VanR
MSKPGQTVLVALRKMIASGELAAGERLMEVPTAELFGVSRMPVRMAFRTL
EQEGLLVRFGGRGFQVRSVSAEDIAGAVEVRGVLEGLAARQTAERGLSAE
GRAILERCLVEGDALFDKGYVNEEDLELYHDLNMRFHQVIVAGSGNPAIA
DALARNDHLPFASVTALAVDRQDMAREYRRFNYAHMQHHSIFDALVNGQG
ARAEALMREHANATLRYAEIFGSAVADERMRLILRPQ