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# Streptococcus pyogenes M1 GAS, SF370

>SPy0338 conserved hypothetical protein
MRCPKCNYHKSSVVDSRQAEDGNTIRRRRECEQCHTRFTTFERVEELPLL
VIKKDGTREQFSRDKILNGVVQSAQKRPVSSTDIENVISRIEQEVRTTYE
NEVSSTAIGNLVMDELAELDEITYVRFASVYKSFKDVDEIEELLQQITNR
VRGKKKRLNNDETN
>SPy0367 conserved hypothetical protein
MTYLSQIEALLFVAGEEGLSLRHLASMLSLTPTALQQQLEKLSQKYEKDQ
HSSLCLIETANTYRLVTKEGFAELLRAYAKTPMNQSLSRASLEVLSIVAY
KQPITRIEIDDIRGVNSSGALSKLLAFDLIREAGKKDVVGRPHLYATTDY
FLDYMGINHLDELIEVSAVEPADEEIALFRTQD
>SPy0715 putative transcriptional regulator (GntR family)
MPKEQPLYLQIVDDLEVKIKKSMTENDKLLSERELSDLYGVSRITIRLTL
KELELRDLIYKKQGKGTYVSGIKEPATDLSSTYSFTEQMKKMGKTPKTEI
LSFEQYQVTPYLSGLLELDPDTEVFELERLRIADDMPLMFERSYIPAQPF
QGLSIADLKRKALYDIFAKDYQETIRLAEEEFYASIALDYEAGLLGIKKG
DPVLHIIRKTYNDKNILIELTFSIARADQFRYRVQHHPNG
>SPy1485 putative Cro-like repressor protein-phage associated
MVTIAELRAKHNKMSQRELAKELGVTQTSISNWEKDQTKISGEYLISLAL
FFDVSTDDILGINKQATQKF
>SPy1325 putative transcriptional antiterminator (BglG family)
MLSKKELAIITFLIHHKEQFVSSATLAEVIGMSDRTVRKYLKELISSLPE
HGAHIISKQGRGYCLEIDHSMAFDIFWQESVTSKKRLADVTQVEESVDRE
DYVLHKFFFEDAVQDFEELCQELYISRTTLKHVLAGIKERIIPYQLELEI
THQHIQIRGKEEDIRHFIMDYFFVTSFDNTLSTMVGNTFLEGINFAEIMI
IVLDECRDAKLKLSDFVMNNLVLHIALMVQRIRSGCPLELFSIPIAIRQS
DEYQVALRILYRVEEVMGIRFPKEEANYIALHLKVKHSVGKHWQDDNTDE
KLQDHLKACIAKISQLTGMTLETDTNLFQGLLAHMMPLTIRLENHIQLTN
PLTEEIKSQYPEIFTLTKQTFSDLLVCQKNDVSDDEWAYISLHLMAAIER
YSNRHKLRVLVVCATGYGSAMMLKNRLEKEFEGRLRIVDVISYYEITEER
LKTVDLIISSISLANLMFLTPVITVSVFLSNQDIETIRQFIGEQEGIKKE
VSLPSQMSLAKAEQLLTGVFSPNRFLYLDEKISKEDLLLRMIACLDEAGT
ETFVEDFYHQMVLRENYSPVIYGEVLAFPHPANPMTYSEQVVVVICREPL
EWDKAHQAVHFVFLLSPSKGHNHRLKYVSPGLASFVNQVELQQALLEEPN
YSKFMTVFTPLIHD
>SPy2127 hypothetical protein-phage associated
MRRNYSRVIDELRTDYGLNLVAIGQRLGTDPRTVGKWWQGKHNPNQESRK
KLNRLYREVKETMMTQVNIFEEANDNTKQVMQVITTTNFHGQPLDIYGDI
QEPLFLARAVAEMIDYTKTSQGYYDVQAMLRKVDEDEKLKGMALEGTTKN
FRSGQKVWFLTEHGLYEVLMRSNKPKAKEFRKAVKNILKEIRLNGYYMQG
ELVQELAQPSTQKLPGISDLTYILNKLADLVDMDNLADISNGIDRVQQLV
KLISL
>SPy1723 conserved hypothetical protein
MSKVKKIPLRKSLVSGEIIAKRDLLRIVKTKDGQVFIDPTGKQNGRGAYI
KLDNQEALMAKKKQVFNRSFSMDIPESFYDDLIAYVDHKIKRRELGLD
>SPy1297 putative transcription regulator (LacI family)
MMTSKITIKDIAREAGVSVATVSYVLNQRNDQKISEETRNKVLHISNLLN
YTPNQAARSLVTQQSNSVVLYYKYADSILARAEQLHTISFLSRLLHEQDY
QLVCLNEDSTEKFDWADLILTLDVDNDTFYKIGKLNFKPLIAIDSFVNDP
LFFQINTDYAALKDQANQFFKDEPYTLLSLPITNRERYEHVSAFFPSLHI
VNDLRELTYFEKENLLLIDESLDQFFVNSSQKLYCPRFSPKKGQVILEAI
EWAKKRQPDKKHNLLV
>SPy1994 pai1 protein (theoretical repressor)
MKIIEYKGNYRDDLIFMVLEAKNALRRIPSINPDLLTIETSYLEKEDCFW
LAVNEESRVIGSIAYSSIPKTNEVFLHRLFIKPSLKHQGIGSQLLAFAED
YLRKIGKSHVRIHLGQPKEQWFESYRFYPKHGYQFYDDTHLIKKLI
>SPy1870 putative transcriptional regulator (GntR family)
MSTNDLTKKLKKLKHVQVYNTIFQLIQDGTYSPGMQLPSEPELARQLNVS
RMTLRKSLALLQEDHLIKNIRGKGNFILKTPETKYHQGFEYLQHPIYASL
SSDITKVELEYRIEVPTVAITASLKQETPVVIIVDRWYHSQNKAIAYSLS
FIPIEVISKYAINLNQEEPLLTFLEEKIYESGKASHSCNQIGYTKTGNYT
ATKYTLSENSAFILIQETLYNGKDILVSTKHYVPADLFDLKVQSQSC
>SPy0846 conserved hypothetical protein
MTKDRQIKKTKTAIYSAFIALLQKKEYSKITVRDMITLANVGRSTFYAHY
ESKEMLLKELCEELFHHLFRQKRNVTFEDYLVHILKHFEQNKDSIATLLL
SNDPYFLLRFKNELEHDVYPNLRCKYIDKTTIPEVFLKQFVLSSFIETLK
WWLHQRQRMSANELLKYYLELIK
>SPy1179 putative transcriptional regulator
MNPIIEAVKQNLDLLRNIPLKIAFYNALKKTIILRQIPVGSRINEKEFSI
ALNISRTPIRYALGLLSEEHLVEHIPKKGIIVKGVSIKDACEIFEIRKAL
ETLATVQAMHLMTEEDFKVMHNLLEDCETFIAEDDTNRILDNFNAFNNLI
YSYSQMVRLKEIVTELQAYLVYFRKISISSVERRKRALSEHWMIYRGMKN
KDHEQITLITHEHLNSSLEFILKEMRPEQND
>SPy2099 putative transcriptional regulator (GntR family)
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLL
TKAGLILKKQGRGTQVIRHHQIMFPISELTSYQELVSYSNLDSKTNVIAI
DKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIM
TREIAEHSIYQYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVV
SVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK
>SPy1621 putative two-component response regulator
MSKIKVILVDDHEMVRMGLKSFLNLQADIDVVGEASNGREGVDLALALKP
DVLVMDLVMPELGGVEATLEVLKKWKEAKVLVLTSYLDNEKIYPVIDAGA
KGYMLKTSSAAEILNAIRKVSKGELAIETEVDKKIKAHDQHPDLHEELTA
REYDILHLLAKGYDNQTIADELFISLKTVKTHVSNILAKLEVGDRTQAVV
YAFRHHLVPQDDN
>SPy2144 hypothetical protein
MSAKEQLKELKPLFALITLFEEQRDKDIKLINAFHNPEAIRHIEKGTAKQ
LLYLAKERDKRLAMIATLQDERQIAVIKARYVDDLSWDEILDKLGYSINT
VFKLHRKALEVLDEQEERYS
>SPy0824 putative capsular polysaccharide biosynthesis protein
MNIQQLRYVVAIANNGTFREAASKLFVSQPSLSVSIKDLEAELGFQIFNR
TTSGTVLTSQGLVFYEKALEVVKSFDSFEKTFSQADLDQNEFSIASQHYD
FLPPLITAFSQQYDGHRVFRIFESTTIQILDEVAQGNSEIGIIYLNVDNQ
KGLFQRMDKLGLEYVSLIPFTTHIYLSKTHPLANREALYLNDIQGLPAVR
FTQERDEYLYYSENFVDTSECPRIYNVSDRATLNGILERTNAFATGSGFL
DHRSVNGIKVIPLADHIDNQMIYVKRKDKNLSVAGATFVTILKDYFDKRR
KALT
>SPy0939 putative repressor protein-phage associated
MASTIAFPAMVKELRLSKNLTMEQLAEEVGKTKSTISKWEKGTRSPKIYE
IEEIAKFFGVEPKKMMFGDNPTPTAPQVELIPSTLQKINSTSSQLEHKRQ
LNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETI
ELPVDYDADFVIPVYGDSMEPKYHSGDYVFVKLSVELTDGDIGVFEYYGD
AYIKQLLINDKGAFLHSLNQCGDYPDIPIDRDSDFRIIGEVMGSYRER
>SPy0533 putative positive regulator
MKSKLGATLRKVRKGKQISLCFVADEHLSKSQISRFERGESEISCIRLIN
ILDKLHITLDEFLILHDEDYTNSETFANLVQYIRKQYSSQNINNIACLLS
DTSDYTLNSFEKTMVKSILHTMDSSIIPSDDELLQLTDYLFKVEKWGYYE
ILLLGNCVRTINYNSYFLLTKEMLNNYIYSSRNKTNKRIVTQLAINCFIL
SINKEEFSNCSYLIDEIKTLLDNELNFYEQTVFLYATGYFEFKRQLETGV
EKMKQAIQVLDILNEDKLKLHYADHFDKLVNKD
>SPy1699 putative transcription regulator
MTDKALSKRSLQNLTQFNKETRRIARESMEIALLNLLETKPLGDITISEL
VTKAGVSRNAFYRNYTSKEAIIEQLLVGVIRRIFRGLKQFDIKTQAYQAW
LYLFTEAKKEAQLLKMIFKHHLHHLLTRLVTKRLKAYQKLKDKKQSHYKR
LFWSNAIVSVLTNWISDDMIVPAEEMAAMGLPLLT
>SPy1734 conserved hypothetical protein
MVQQSLVIEEGVPQDAKAVLSLVTAAAKETDFITGVETILEATPQELSDF
LSRSQTSFIDFCLLARLDEKVVGLLNLSGEVLSQGQAEADVFMLVAKTYR
GYGIGQLLLEIALDWAEENPYIESLKLDVQVRNTKAIYLYKKYGFRIESM
RKNDIKSKNGDDLDVYHMRKSVSQ
>SPy1386 putative transcriptional regulator protein
MEVILKNRLKELRARDGINQTEMAKLAGVSRQTISLIERNEYTPSVIIAM
KIAKVFQEPVEEVFRLVEVEE
>SPy1546 hypothetical protein
MADKFDANDETRTVYAVVYDNDQPVSTGQFLAETKIEARLTRIVTLADYC
GCGYGAKVTEALETYTRREGFYQLTIHSELTAQTFYENLGYQSYGPKCLE
DGEYCQSLAKTILKWEKNMDIAMLIAIVGGLLGCYLYLTKNN
>SPy1285 putative transcriptional regulator (GntR family)
MSWKFEEKSPIYAQIAQHVMMQIISQEIKSGDQLPTVREYAEIAGVNPNT
MQRAFTELEREGMVYSQRTAGRFVTDDQKLIARKRRELAISELESFITNM
TKMGFSHTEIIPVLTSFLKEDSQ
>SPy1259 putative transcriptional regulator
MISPKKEITSSKYQKIAISVAQRIANGEYEVGEKLKSRTTIASTFNVSPE
TARKGLNILADLKILTLKHGSGAIVLSKERAIEFINQYESTHSIAVLKEK
IRETINDQGKAMEKMAVLVNDFLMQSQSVSKQYPLAPYEIICNQDSEHFG
KSIGVLNIWHQTGATIVAIEHAGQFIVSPGPYSVIEKGDHIYFVGDESVI
SRMKTFFNLRKGL
>SPy0583 hypothetical protein
METKFYKQRKNRLVAGVIAGLADKYGWDLALARVLAALLIYGTGFGVLLY
ILLAIFLPYKEDLLEERYGRGPRRRKDADVLNEEEDGWFW
>SPy1680 putative transcriptional regulatory protein
MKIEDLMDKERRAQYRLLVTLYHAKETLRLKDLMRLSNLSKVTLLKYIDN
LNHLCREQGLACQLLLEKDSLSLKENGQFHWEDLVALLLKESVAYQILTY
MYCHEHFNITNLSVELMVSEATLNRQLAHLNQLLSEFDLALSQGRQLGSE
LQWRYFYFELFRHTLTRQGIDALVNQLDASHLATLIERLIGQSLSAEALE
QLLIWLAISQARMSFQKSYNDHFLRDSDFMTSNIFFKRLESMLLHYLRRY
ALEFDAFEAKSLFVFLHAYPLLPIASMKYSLGFGGPIADHISEALWLLKK
AHVIIHQTKEEIIYGLGIFFSKAYFFKGAILSQPTNSQYLYQLVGEDKRA
LLRVIINHLVLQMDQETDFSQQLSDDILALLIFSIERHHEPLLVGLALGQ
NKVEAAIAELAIRRHLGHRRDFQLMPYDHQKVYDCLITYQTVCLPRQDLP
YYRLKQYSSPYELTALEAFLKDLFQQKNTREEELSLSPAAKSSFAHKTV
>SPy0544 conserved hypothetical protein
MRFSYNKLWKLLIDKGWTKTKLRQEAGISSSTIAKLGKGENITTDILLEI
CIALDCKIEDIVEIVDNNI
>SPy1934 putative transcription regulator
MKNLKLKAARAGKDLSQQALADLVGVSRQTIAAVEKGDYNPTINLCIAIC
RVLDKTLDDLFWEADDSR
>SPy0580 conserved hypothetical protein
MENNNNHNIAEALSVSLHQIEQVLALTAQGNTIPFIARYRKEVTGNLDEV
VIKSIIDMDKSLTTLNERKATILAKIEEQGKLTDQLRTSIEATEKLADLE
ELYLPYKEKRRTKATIAREAGLFPLARLILQNAQNLETAAEPFVTEGFAS
PQEALAGAVDILVEAMSEDAKLRSWTYNEIWQYSRLVSTLKDEQLDEKKV
FQIYYDFSDQVSNMQGYRTLALNRGEKLGILKVSFEHNLEKMQRFFSVRF
KETNPYIEEVINQTIKKKIVPAMERRVRSELSDAAEDGAIHLFSENLRHL
LLVSPLKGKMVLGFDPAFRTGAKLAIVDQTGKLLTTQVIYPVAPASQTKI
QAAKETLTQLIETYQIDIIAIGNGTASRESEAFVADVLKDFPNTSYVIVN
ESGASVYSASELARHEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIG
VGQYQHDVSQKKLSENLGFVVDTVVNQVGVNVNTASPSLLAHVSGLNKTI
SENIVKYREENGALTSRADIKKVPRLGAKAFEQAAGFLRIPGAKNILDNT
GVHPESYPAVKELFKVLGIQDLDDAAKATLAAVQVPQMAETLAIGQETLK
DIIADLLKPGRDLRDDFEAPILRQDILDLKDLEIGQKLEGTVRNVVDFGA
FVDIGVHEDGLIHISEMSKTFVNHPSQVVSVGDLVTVWVSKIDLDRHKVN
LSLLPPRDTH
>SPy1952 conserved hypothetical protein
MLSHELIRNYQLFSKYKGHSLEAFESILKASKRHILADIAKINDTLSLYQ
LPLIALDRQLVYPPDLTEKDLLNRMLPTLDDYLFQDERLDMIIIYIMMAK
EFISINHLESLLRLSRNSVIADLNLVRDRVQAFQVTLAYNRQDGYFFEGE
PLALRRLLESAVSSLLQVTSGPWVFSYLLHELGLPDQKKVMAATLEELSR
ENHLTFISEKLRDLIYFFCLLAHRPFSRNVRAEAVDTFPLASPAVETMVD
QLLVNFPSLTEEKYLVQSRLLGCIQGDLELVFQQPIYDIMEEIINSVAVN
TGLSITDTPELRQNLYSHLLPAYYRLYYDINLTNPLKEQIKQDYESLFYL
VKRSLSPLEKQLGKSVNEDEVAYFTIHFGRWLQAPKKRPSNQLVALSVCP
NGISSSLMLEATLKELFPQLQFIRIHQLDKIKLLDPASFDLIFSTVAFDC
AKPVYVTQALMGPVEKMMLKKMVCDDFHLPLSEQFALDDLLSIIHKHTTI
TNKEGLVSDLSRYLIGNHLTIEKGGLGLLDLLTADFIRQADAVSDWQEAI
RLAAQPLLEHQMIETSYIDGMIDSVNELGAYIVLAPKVAVPHAAPEKGTR
QLGMSLLQLKEPVSFDLKQEGDPDKQVQLIFVLSAVDSSSHLKALQELSL
ILDDDEHIEQLIEAKNTEEIMSLISHMIEKGDESHD
>SPy2053 putative transcriptional regulator
MKEERRRLLAKVAYLHYVQGKSQTLISKEMNIYRTTVCRMLAKAKEEGIV
RIEIADYDADLFALEEYVRQQYGLEKLDLVPNQVEDTPMDTLTNVAKTAA
EVFRHVVKDGDKIGLSWGATLSCLMDELNPKAMKDVFIYPLAGGPSHINA
KYHVNTLVYRLARIFHGNSAFMNAMVIQEDKHLAKGILQSKYFNDILTSW
DQLDLALVGIGGEPNSLEQSQWRDLLTSSDHDQLKYEKAVGEVCCRFFDQ
AGQPVYTGLQDRTIGISLEQLRRVPKTMAVATGKHKAKAILAALKAGFIN
YLVTDKETMLAVLALDEDIDLNNVLL
>SPy1202 putative transcription regulator, GntR family
MNNRLEECGMLPAYIKIHDAIKKDIDLGIWPIGSRLPSERHLAEHFTVSR
MTLRQAITLLVEEGILERRIGSGTYVASHRVQEKMRGTTSFTEIIRSQGR
QPSSKLLSYQKQLASDTEVKELNLDKTDLVIRMERIRYADSVPLVYEIAS
IPEKFIKTVKRADITEHFFHSLIANGYEIGKSKQTIYAKLASERVASYLE
VAKGHAILALTQVSYFTDGKPFEYVRSQYIGDRFEFYLENN
>SPy1755 putative transcriptional regulator (MarR family)
MEYDKIYPYLVDIFNRILVIEEMSLKTSQFSDVSLKEMHTIEIIGKYDQV
TPSDIARELMVTLGTVTTSLNKLEAKGYIARTRSRSDRRVVYLSLTKRGR
LLDRLHAKFHKNMVGHVIADMSDEEMQALVRGLGNLHQFLEDLV
>SPy0037 hypothetical protein
MLEHFGGKVKVLRLEKRISREDLCGDESELSVRQLARIELGQSIPSLSKV
IFIAKALNVSVGYLTDGADLELPKRYKELKYLILRTPTYMDDGKLQVREE
QFDEIFEDYYDKLPEEEKIIIDCLQATLDTLLSENTNFGIDLLQEYFNQI
KTKVRFRQNDLILLELYLAYLDIEGMDGQYSDKIFYDSLLDNLSEQFEQF
ELDELFIVNKIIIDISSLSLKNNRLDNLEKAIEMSQKIMAKIQDWNRMPI
LKLIEWKYFLIKQKDIIKAEQSFMKACLFAQMTADQYLENKLIQEWEKDV
KSY
>SPy1496 putative repressor protein
MKKSERLELIKKMVLTHPIETQHDLLRLLAEHGLELTQATISRDMNEIGI
VKIPSGSGRYIYGLSQDSGKKIVQGPRSIKSTILAVSDKTKGLEQHLYLK
VVPGNSKLIKRYLLADFSKAIFSLIADDDSLLLIAKSPSEADMIRQEILL
WMQGIT
>SPy0874 putative two-component response regulator
MKILLAEDEWQMSNVLTTAMTHQGYDVDVVFNGQEAIDKAKDNAYDIMIL
DIMMPIKSGIEALKEIRASGNCSHIIMLTAMAEINDRVTGLDAGADDYLT
KPFSLKELLARLRSMERRVESFTPQVLQFAGVTLNINEQELSAGNAIRLA
SKEGKLMAFLMLNQGKYLDTKTLYQHVWSDQEDYDTSIVWVYISYLRQKL
LAIQANVIIAGDKDTSYCLLEK
>SPy2145 hypothetical protein-phage associated
MNKKNAIRKLKEFHRWQRIANSLDLTYTELYQFDIEYHPTRRKHLEISRE
CALEELDAIRYAINQLSKVEYRQILIECYLISEEKTQQDIMEELNGSQSW
YYESKKRALLEFVEFYRDGALKNNVHL
>SPy1602 putative transcription regulator
MTKLLYKKIYHFIKEQIASGRLQIGDRLPTEKELSEQFSVSRITSKRALV
ELEQEGLITRSRGKGSFVAKKQVTSPEANKDLLLILPFASDYELGDYAKG
IMTSIAETGYRLMVQLASTVRLDTLSDYAGIIYYPEDVNHSIDFLFYCDH
HHIPLVLLDKSLDLFQFPSVVADNKGGACQLTQHLIEQGCDQISFVATGS
FGEVSSVRDRYLGYLAAMAESSLKSHYFPKTETETTDAYLDRLVKTLSET
TATKRGLVVENDWLAIQLIQKITQVGLSIPDQVAIVGFDNSQASRLLSPK
LSTAAQDFYQMGQEAAKVLLQIIHEPDQAVVSCQLPVQVFIRESSH
>SPy1210 conserved hypothetical protein
MTTKYQTIISNIEQDIQKQRLKKGDKLPSIRVLSKVYYCSKDTVQRALLE
LKYRHLIYAVPKSGYYVLGNVSMPDNVLNLSLEDYNNMAYEDFRLCLNEA
LSAKDKYLFHYYHKTEGLEELREALLLYLAENSVYSNKDQLLITSGTQQA
LYILSQMPFPNTGKTILLEKPTYHRMEAIVAQLGLPYQTISRHFNGLDLE
LLESLFQTGDIKFFYTISRFSHPLGLSYSTKEKEAIVRLAQRYQVYILED
DYLGDFVKLKEPPIHYYDTHHRIIYLKSFSMSVFPALRIGALVLPSGLKP
HFLTQKSLIDLDTNLLMQKALALYLENGMFQKNLRFIKRYLKQRERQLAL
FLKQNCPDIHYQLTPTHLVIDYTTSDSYRNFTLDKSDRIIITGKKRYLSI
TINQQIQSKLNSLIKNTCGKSN
>SPy1834 hypothetical protein
MEIGQQIIRYRKQQALSQEKLAEKVYVSRQSISNWENDKTYPDIHSLLLL
SQIFQVSLDQLIKGDIEKMKYTITQVDKKNFKRDTKVMVTLMILLMISSY
PLVYFLEWLGLGIFVLLSIITMTYANRVERFKKKYDVQPYKEILAVSNGK
LLDEIEKREERATLPYQKPLIVTVFFLITVAFAFASRFMFTWLFH
>SPy0503 putative exoribonuclease R
MMKERIMTYLKEHGKSNVNDLAAALEMAGAKHFPSLIKTISKMESQSLLR
FSDDGSLALRKEREKKKEPTVQGVFRANKAGFGFLHVDENEDDMFIGRND
VGYAIDGDTVEVVVKKPADRLKGTAAEAKVVAIVDRSLKTAVGTFILDDD
KPKYAGYIRSKNQKIQQKIYIKKEPVVLKGTEIIKVDIDKYPIRGHDYFV
ASVRDIVGHQGDVGIDVLEVLESMDIVSEFPAEVLAEANAISEAPTAKDL
IGRVDLRQETTITIDGADAKDLDDAIHIKLLDNGNYELGVHIADVSYYVT
EGSALDKEAIARGTSVYVTDRVVPMLPERLSNGICSLNPNIDRLTQSALM
EINSQGHVVNYQICQSVIKTTYRMTYSTVNDMIAGDEEALQEFASIADDV
TLMVALHRILEAMRSKRGALNFDTQEAKIIVNDKGMPVDVVLRQRGIAER
MIESFMLAANECVAEHFAKAKLPFIYRIHEEPKAEKLQQFIDYASTFGIH
IQGTANKISQEALQAFMAKVEGQPGAEVLNMMLLRSMQQARYSEHNHGHY
GLAAEYYTHFTSPIRRYPDLLVHRMVREYNQPSQEKRDHFAQIIPELATS
SSQLERRAIDAERVVEAMKKAEYMAEYVGEEFDGIVSSVVKFGFFVELPN
TIEGLVHITSLPEYYHFNERTLSLQGEKSGKVFKVGQPIRVKLVKADKET
GDIDFEYLPSDFDVVEKIKMSDKASRRDRRKSSKSSKGTKKKEPKEVAKA
KTKGKTKKGSKKPFYKEQAKKKSRKRS
>SPy2027 putative two-component response regulator
MFKILVVEDDDTISQVICEFLKANNYDPDCVFDGQAALDKWQTTSYDLII
LDIMLPSLSGLEVLKTIRKTSDVPIIMLTALDDEYTQLVSFNHLISDYVT
KPFSPLILIKRIENVLRVSTPDEKRQIGDLLVDETEHSVYWQGTLVKLTK
KEYDIIDYLAKRHQKIVTRDQLMDDIWGYSELDTRVLDNHIKNLRKKMTG
IPLKTITGMGYLLGERE
>SPy1861 putative repressor-phage associated
MSAKKTFFASNLKYLRLKKNMEQLELANLLGRKSSSSISEWEKGKYTPKS
GLLSDIAAIFDVSLTALMEEDLTLENKGVSYQLPQRELAMISEQLSENNY
TKWVDFAQILLEQQAKEDRELDNH
>SPy0853 putative transcriptional repressor
MAKITEENYVSLEDLMQLLNSSESTIRRDLGELEQEGRLHRVHGGAELFH
SLQEELSNQEKSVKNSHIKKAIAQRASQLIYDNDVIFIDAGTTTEFLLPF
LQAKNLTVVTNSIHHAARLVELSIETIIVGGYVKQTTDASIGNVALEQIR
QMNFDKAFLGMNGVDDSYLTTPDMEEAVIKKAVLSNAKLAYILVDGTKIG
QVSFVKVAPINDVTIITLGGSASILKQIKEKAKVIEL
>SPy0657 putative cI-like repressor, phage associated
MRTNSEIISLIQSKVEERKMSMSELARNVGIAKSTMSRYFNKTREFPLNR
ADDFAKALNISTEFLLGIDLNSEVDGSELLGIYRELEEQRRVIVLDTAKE
QLEEQTKIINFSDKKTDIEDIFEVKGTTFAAAASGFGRGFEADDYDTYTV
YTDEEPPHYDYAIGIRGDSMLPKYEQGDMLYIVDKGMSTYSGQLCIVVHN
GNTYFKKVYTEHDGLRLVSLNKKYSDIFIGYPPAEDTYIKIYDVVGSFTP
IEF
>SPy0228 hypothetical protein
MVKNGFINVMPSQVDKRYKQVVLAQVGRDKLPLLRECRKDIEHYFLKEIT
KEELLTAKKVIEQLKQNMLTYKGDNDA
>SPy0346 putative arylalkylamine n-acetyltransferase
MLIRQVQGSDLEVIATIESDNFSPQEATTRAVLEEHIRLIPDTFLVALID
QEIVGYIEGPVVTTPILEDSLFHGVTKNPKTGGYIAITSLSIAKHFQQQG
VGTALLAALKDLVVAQQRTGLILTCHDYLISYYEMNGFINQGISESQHGG
TLWYQMIWKL
>SPy0259 conserved hypothetical protein
MPKNHRLITKIEASLEHMTSLEKGIAHFFITTDLTPQELTASEIVKRLHI
SQAALTRFAKKCGFTGYRAFAFDYLHSLQESQETFQSIHLELTKRVLMDY
DALINKTYELVNEEKLLNLAKLIDSSERVYFFGKGSSGLVAREMKLRFMR
LGLICDAYSDTDGFTWANSLVNENCLVFGFSLSGKTNSVITALHQASQRG
AKTVLLTTDNQTEFDDSLDIIPVSSTHQLHYGNRVSPQFPLLIMMDIIYA
YVLAIDKPHKEKIFKNTIIDKENNDL
>SPy1634 putative transcriptional regulator (LysR family)
MDIKQIRYFIAIVENHFNLSQAAELLYVSQPTLSMMINDFEKRENVKLFK
RKRGRIIGLTYLGDNYYKDAQKVLSLYDDMFLKLHDHSKGLKGSINIGIP
PLILSVVFSEVMPKLILENPGIQFNVKEIGAYQLKNELLVGNVDVAVLLS
PTGIADNLVETYEIQRSELSVCLSPRHRLASKKVIQWEDLTDEQLALFDP
SFMVHHLVLEACERHQVRPNIILTSSSWDFMLNSTKINHNVLTICPKPIT
ELYQLKDIKCIPMERPISWRVVLTRLRKKSYSEIEAYIMDDLLQSFFK
>SPy0181 putative transcriptional regulator
MILDKKSYDLLSYLLKLETPETVMAISHALNQSRRKVYYQLDKINQALPK
GVDQIISYPRLGILLTADQKAACRLLLEEVTDYNYVMKSDERRRLSSIYI
AVSTERVTIDKLMQINDVSRNTILNDLTELREELEDKQYKIQLHATKARG
YYFGCHPMALIQYLYKLLVDVYQGGNTSFIDIFNRKLSEIQGLSVYFSKD
ILTYFHEYLFLSQASLGKTINTQDSQFMLQILPFMLLSYRNMRLDSETKS
ALKQEFHLIWKRKEYHIAQDLARELYHNFKLHLDDIEVSMVAMLMLSFRK
DQDHHVESQDYDDMRATISHFIDQLESRYQLHFTHKQDLLKRLTTHCKAL
VYRKAYGIFLVNPLTDHVKEKYEELFAMTQSCATILEQDWTISLTDDDIA
YLTIHLGGELRHNNTEQEKTKLVIVSDDGIGIQKLLFKQCQRYLANGQIE
AVFTTEQYQSVYDLLAVDMIVATTDTLKTKIPMLIVNPILSDDDIIKLIR
FSKQGRLSEHSRFSTELTKAIEAVVKDESDRYALVSKIEKLIHRELL
>SPy1535 putative ribose transport operon repressor
MVTIKQVAEEAGVSRSTVSRYISQKGYVSDDARHKIKAAIAKLHYTPNVL
AQSLKTKKNQLVGLLLPDISNPFFPRLARGAEEYLKEKGYRVMLGNISDS
EALEEEYVHVLLQSNAAGIITTHDFTKRYPTLAIPVVVVDRVDQETQYGV
FSDNRAGGLLAAQTVWQAGAKEVLLIRGPLDNAENINERFEASFSYLQKQ
DVTMYVCDSQNFDFESIQLEASYNLKCYPTIDSIIAPSDIHAIAYIHELH
SQGKKIPQDVQIIGYDDILMSQFIYPSLSTIHQSSYLMGRYAAELVYTIA
SQLTVKANRIKLPVHYVERETIRKR
>SPy2164 hypothetical protein
MIIGGLYMKFFEENYSQEIPTRIKNLRKKHNITQSELGNAGQVSQVESGK
RPITSSMLVYLNALTASNYTYIVFGELDEFIENLFHYFFSSILYRDLEAV
DENLYSFMSDDLISIQSSCLSIAKTFANFNIQRKRFMISTETEMDTFHKK
DDIDVWVGGKSYNPARSFRNNPINELTVIDFEEMADILLLMLRDNLIRSF
EINVCNTLFELDKNGEPTTFNLDKIDSIINKWWSENVSTEIIPNLIKKLR
ENPLFNIGFMVNDILERMYKEDIPKSYLTSVPLVISKKARSTLSIKSNGS
QKIDKSKFAQILSL
>SPy0258 putative glucose kinase
MKHYLAIDIGGTAIKYGLISETGDLLEKEEMATEAYKGGPSILEKVKGLV
KTYQDQMDLAGVAISSAGMVNPDEGEIFYAGPQIPNYAGTQFKKEIEETF
GLPCEVENDVNCAGLAEAISGSAKDYPVALCLTIGTGIGGCLLFNSQVFH
GSSHSACEVGYLHLSDGQFQDLASTTALVQEVVLAYGDDISQWDGRRIFE
QAKAGDAICIAAISKQVDYLGQGIANICYVVNPNVVVLGGGIMAQKDYLA
DKLKTALDSYLVSSLAKKTQLKFASHGNNAGILGAYYHFKQKNERSCSFI
TLEKIENNLASS
>SPy1878 putative transcriptional regulator
MKEKELRRSMAVFPIGTVMTLTDLSARQIRYYEDQGLIKPERTQGNRRMF
SLNDMDRLLEIKDFLSEGLNIAAIKREYVERQGKLMQKQKALTDADVRRI
LHDEMLTQSGFSTPSQHIGNFRI
>SPy2177 putative transcriptional regulator (TetR/AcrR family)
MVNRKENTKQAILKAMVMLLKTESFDDITTVKLSKRAGISRSSFYTHYKD
KYEMIDYYQQTFFHKLEYIFEKKYQNKEQAFLEVFEFLQREQLLSSLLSA
NGTKEIQAFIINKVRLLITTDLQDKFSTEELSQTEKEYQSIYLAHAFFGV
CQSWIAKGKKESPQEMTQFVLKMLTST
>SPy2172 conserved hypothetical protein
MYFPVSATLIEFLILAIVEKNDSYGYDISQTIKLVANIKESTLYPILKKL
EKAGFLTTYSQEHQGRKRKYYAVTSSGRAQLIFLKKEWQSYKFALDGIIE
GSLRHDKD
>SPy1355 conserved hypothetical protein
MSKHQDILDYLEKLAIGKKVSVRSISNHLKVSDGTAYRAIKEAENRGIVE
TKPRSGTVRIEKKGRVRIDRLTYSEIARISDSEVLAGHAGLGHEFSRFSI
GAMTQQNIRRYLVKGGLLIVGDRETIQLLALENHNAILVTGGFPVSKRVI
EMANNQRIPVMVTHYDTFTVATMINHALSNIRIKTDLKTVEQVMIPITDY
GYLCEDSSVEEFNTLIKKTRQVRFPVLDYKRKVIGVVSMRDVVDQLPTTK
LTKVMSKNPITARPNTSLANISQKMIFEDLNMLPVTDEENNLLGMITRRQ
AMENLPNHQPNNPYTYSEQILSNLEETVDYYQVVVEPTMIDSAGNMSNGV
ISEFLKEISIRALTKKHQKNIIIEQMMVYFLHAIQIEDELKIYPKIITEN
RRSSTIDIEIFVDDQVIAKAIITTKIN
>SPy1106 putative two-component response regulator
MNVLIIEDDPMVDFIHRNYLEKLNLFDRIISSDSMKAVQSILTDYAIDLI
LLDIHITDGNGIQFLEKWRTQHIPCEVIIISAANDGNIIRDGFHLGIIDY
LIKPFTFERFQESIQQFVTHREHLANQQLEQAQIDQLKCLTSKKDTKNKQ
LLEKGLSESTFQWIMENIKVFDQPFTIQELASACHLSHVSVRKYIAYLEE
NKQLNSQQIFTKVGRPYRVYW
>SPy1215 hypothetical protein
MSNWTTYPQKNLTQAEQLAQLIKEADALVVGIGAGMSAADGFTYIGSRFE
TAFPDFIAKYQFLDMLQASLFDFEDWQEYWAFQSRFVALNYLDQPVGQSY
LDLKEILGTKDYHIITTNADNAFWVAGYDPHNIFHIQGEYGLWQCSQHCH
QQTYKDDTVIRQMIAEQKNMKVPGQLIPHCPECEAPFEINKRNEEKGMVE
DADFHAQKARYEAFLSEHKEGKVLYLEIGVGHTTPQFIKHPFWKRVSENP
NALFVTLNHKHYRIPLSIRRQSLELTEHIAQLISATKTIYQKS
>SPy2126 conserved hypothetical protein-phage associated
MTQITLKAARINAGYTLKQVAGAVGKNPQTISKYEKDSSDISLGLLQKLS
SLYGVTIDNLFLGKKVRK
>SPy1486 putative repressor-phage associated
MEQLGDRIRKLREGRNMTQTELSEILGMKTYTTVSKWEKNENFPKGKDLK
KLAEIFNVTSDYLLGLTDSKLGKITIQNEQPEIVSIYNQLEQPRQEKVLN
FANEQLEEQNKTVSIFDKKSEETEDYITDYVEGLVAAGLGAYQEDNLHMK
VKLRSDDVPDEYDTIAKVAGDSMEPLIQDNDLLFIKVSSQVDMNDIGIFQ
VNGKNFVKKLKRDYDGAWYLQSLNKSYEEIYLSKDDDIRTIGEVVDIYRE
Y
>SPy0190 conserved hypothetical protein
MSNFISPVYEIKSIPIEKISPNDYNPNSVAPPEMKLLYDSIKSDGYTMPI
VCYYDKEEDRYSIVDGFHRYRIMLDYSDIYERESGRLPVSVIDKSLDYRM
ASTIRHNRARGSHDVDLMSQIVKDLHECGRSDNWIAKHLGMDKDEILRLK
QITGLASLFKDHEFNQSWEPEELLNE
>SPy0669 putative DEAD box family helicase, phage associated
MQLRPYQEEARSAVQHEWEDGKKRTLLVLPTGCGKTIVFSKIIEDRVRLG
ERVLVLAHRSELLEQASDKLMTATGLGTALEKAENTSLGSWFRVVVGSVQ
TMQREKRLSKFPTNHFDTIIIDEAHHAISDGYQRVLQHFDSSNVLGVTAT
PDRGDKQNLGKYFDSLAYEYSLVDAIKSGYLSKITAVTIPLTLDLSTVSQ
QAGDFKASEIGTALDPYLEQIADEMVKQCANRKTVVFLPLVKTSQKFRDI
LNQKGFKAAEVNGESKDRAEVLEDFDNDKYNVLCNSMLLTEGWDCPTVDC
VVVLRPTKVRALYSQMVGRGTRLAPGKENLLLLDFLWHTERHELCRPAHL
IAKTPEVAQKMVDNMTEETEVTFELLEAEEVASKDVVAEREEALAKQLAE
MRKRKRALVDPLQFEMSINAEDLVDYVPEFGWEMAPVSDKQKNALEKFGI
FTDDIGNAGKATKLLERLAKRRETGLTTPKQIRMLERYGFKNVGMWKFEV
ASNMINRIAASGWRLPKGINAREYQPE
>SPy1237 putative response regulator
MIKILLVEDDLSLSNSIFDFLDDFADVMQVFDGDEGLYEAESGIYDLILL
DLMLPEKNGFQVLKELREKDIKIPVLIMTAKEGLDDKGHGFELGADDYLT
KPFYLEELKMRIQALLKRTGKFADKNISFGNLVVDLARKEVKVEGKVVEL
LGKEFDLLVYLLQNQNVILPKTQIFDRLWGFDSDTTISVVEVYISKIRKK
LKGTCFVNRLQTLRSVGYILKNNE
>SPy1630 conserved hypothetical protein
MLKPSIDTLLDKVPSKYSLVILQAKRAHELEAGATPTQEFKSVKSTLQAL
EEIESGNVVIHPDPSAKREAVRAKIEAERLAKEEEERKIKEQIAKEKEEE
GEKI
>SPy1863 putative transcriptional activator regulator protein
MSQFYSTGELANLAGVSIRTVQYYDQRGILIPTALTAGGRRLYTDSDLEQ
LRMICFLRDLGFSIEQIRKVLAEENAAQVLELLLVDHIATAKEDLAAKEQ
QVDIAVKILDRLRKQDPQSLDFLMDISLSMKNQKAWKKLQWKMGISIFLA
IVSYVGLILLSSYLQKFWLVYVAMGLFLPGFSWLVIYFRKQFIYLCPHCH
QKFEPSFNEFALAGHTPRTRKLTCSHCHQKSYCLELAKEDTVSRR
>SPy2125 putative repressor protein-phage associated
MAKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKG
RSLPTAGNVQKLADFFGVLKSDIDPRFDSNNIETNSNIIPSTLQKVTSTL
SQLEHKRQLNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYL
NDVQVETIELPVDYDADFVIPVYGDSMEPEYHSGDYVFIKLSINLSDGDI
GVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSDFRIIGEVIGS
FTSKS
>SPy0245 putative response regulator
MMNIFILEDDFIQQTRIESIVVGILKETRIPCNQLEVFSTPQKLFESIQE
RGDHQLYFLDIEIGEYTRCGLELAAAIRQKDPNAVIVFVTTHSEFAPISF
KYKVSALDFIDKAGGQKQFKEQIEECIRYTYDMMSSRESKDMFLFETPQT
RLKLPYKDILYFATATTPHKVCLWTQTERLEFYGNLSEIQAVAPKLFLCH
RSYLVNLDKVVRIDKSKQLLYFENGDSCMVSRLKMKCLFERWEALR
>SPy1258 putative transcriptional regulator (TetR/AcrR family)
MTKRHTETKAYVKTALTTLLTEQSFETLTVSDLTKKAGINRGTFYLHYTD
KFDMMNHFKNDTLDDLYRLLNQAEIYTDTRQVLNQTLSYLIEHREFITAL
ATISYLKFPQLIKDFCYQFLTTITGFQDIVTNQYHIPYPYALEVYLASIE
SIISYWIANGYQETTEEVADIILKAVTLDN
>SPy1198 putative repressor protein
MFSGHQLKTARLSKGITQSELGRLLHVNKMTISNWEKGKNIPNEKHLNAL
LHLFNVTSDYFDPNYRLLTPYNQLTISNKEKVIGYSERLLNHQIDKKSKD
LIDKPSQLYAYRVYESLSAGTGYSYFGDGNFDVVFYDEQLEYDFASWVFG
DSMEPTYLNGEVVLIKQNSFDYDGAIYAVEWDGQTYIKKVFREDEGLRLV
SLNKKYSDKFAPYSEEPRIIGKIIANFRPLEI
>SPy1960 putative transcriptional regulator (MarR family)
MSHLDKNTALKAMVVFRKAQRTLDAFGADIFKKADLTATQFSVLEVLYTK
GCMRINHLIDSLLATSGNMTVVLNNMERNGWISKCKDKTDKRAYVVTLTD
KGTRLIEAVLPKHVARVEEAFAVLTEKEQLCLIELLKKFKQL
>SPy2054 putative transcriptional regulator
MNRLERIIQLVSQKKKIDVNSLSEQLDVSKVTIRKDLDKLESKGLLRREH
GYAVLNSGDDLNVRLSYNYNIKRRIAEKAAELVQDNDTIMIESGSTCALL
AEVLCQTKRNIKVITNSCFIANYIRQYSSCQIILLGGYYQPNSEVTVGPL
LKEMISLFHVNRVFVGTDGFNKDLGFMGKDMMRSEGVRYMADAAEEVVIL
TDSSKFSKTSLVHQLSLADVNRVITDQALDKQTQELLSASGLVLDFVS
>SPy1144 hypothetical protein
MLRPLSKTDCPMLQEINAKALGYLVSLDLLERQYERLIEDCHHYFLAYAD
KDTNQLLGYVHAERYETLYASDGLNLLGLAVLPAYQRRGIGSALLRALES
QARQEGIAFIRLNSASHRKEAHAFYRNLDYADDKTQLRFIKNLQGDDNDF
>SPy0450 putative metal-dependent transcriptional regulator
MTPNKEDYLKCIYEIGEQEPKITNKMVAEKMHVSAPAVSEMIKKMISQGW
IVKDKAKGYLLKDKGYALVANLYRKLRLIEVFLIHQLGYNTQEVHQEAEV
LEHTVSDSFIDRLDKILDFPDFCPHGGTIPRYGQPLVEMNTTTLNTITEL
GRFRLSRIHDHFDLIQYLEAHHLNINTELTLTQIDTFAKTYTICYGDKEL
VIPENIAKQLYVTAL
>SPy1596 putative transcriptional regulator
MRHDRLFYYNKGEHLMSLLCIDIGGTSLKFALCHNGQLSQQSSFPTPSSL
EKFYQLLDQEVARYSAYHFSGIAISSPGAVNKEKGVIEGASAIPYIHHFK
IQEALEERLHYPISIENDANCAALAEATLGAGKGASSLAMLVLGTGVGGS
LVIDGKIYHGAHLFGGEFGFMIMNDRYQTFSQLGTVVNMAKRYSAIVNNG
KDYTGKAVLALAEQGDPLALKERQVFLQSLAIGIFNIQHAFDPQLILIGG
GVSQADFLLSAIEAELDKLYQAVEISDLRPQLAICHFKNEANLLGAAIDF
YQEHKEA
>SPy1088 putative repressor protein-phage associated
MYPRIRNLREDNDFTQKFVANLLSFSHANYAKIERGEVALMADVLVQFYK
LYNVSIDYLLGQTDYPYRFHNK
>SPy1865 conserved hypothetical protein
MVLFLIRIFSDSDKEENMGIEKTVSELADILGVSRQAVNNRVKSLPEEDL
DKNEKGVTVVKRSGLVKLEEIYKKTIFDDEPISEETKQRELLEILVDEKN
TEITRLYEQLKAKDAQLASKDEQMRVKDVQIAEKDKQLDQQQQLTAKAMA
DKETLKLELEEAKAEANQARLQVEEVQAEVGPKKGFFTRLFAK
>SPy2128 hypothetical protein-phage associated
MNKTETWNGYTIRFVEHQGEWWAVLADIAKALDLNPKFIKQRLGDEVVSN
NHVTDSLGRQQEMLIVNEFGIYETIFSSRKKEAKTFKLWVFETIKQLRQS
TGLEGFQVFRMFDKEHQKKAMNRLVDGLQNATKKDLIKANTIANKAVSNK
YGLPKMVSKNEMTENMLRDREPILDETVELIKVKEKYGLNFSVSEAIYNQ
NTIKKAQ
>SPy1659 putative ATP-dependent RNA helicase
MSFKDYHFKQYVQQALEEIGFVNPTEVQKRLIPIVNSGRDLVGESKTGSG
KTHTFLLPIFEKLDEAKAEVQVVITAPSRELATQIFDACKQIAKHFQEEI
RLANYVGGTDKLRQIEKLKDSQPHIVIGTPGRIYDLVKSGDLAIHKATTF
VVDEADMTMDMGFLDTVDKIAASLPKSVQILVFSATIPQKLQPFLKKYLT
NPVIEQIKTKTVIADTIDNWLVSTKGRDKNGQLLEILKTMQPYMAMLFVN
TKERADDLHAFLTANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGMAGTAITLYQPSD
DSDIKELEKMGIAFTPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGL
VKKKKKKVKPGYKKKIQWAVDEKRRKERRAENRAKGRAERKAKKQHF
>SPy1733 putative transcription regulator
MKIGKKIVLMFTAIVLTTVLALGVYLTSAYTFSTGELSKTFKDFSTSSNK
SDAIKQTRAFSILLMGVDTGSSERASKWEGNSDSMILVTVNPKTKKTTMT
SLERDTLTTLSGPKNNEMNGVEAKLNAAYAAGGAQMAIMTVQDLLNITID
NYVQINMQGLIDLVNAVGGITVTNEFDFPISIAENEPEYQATVAPGTHKI
NGEQALVYARMRYDDPEGDYGRQKRQREVIQKVLKKILALDSISSYRKIL
SAVSSNMQTNIEISSRTIPSLLGYRDALRTIKTYQLKGEDATLSDGGSYQ
IVTSNHLLEIQNRIRTELGLHKVNQLKTNATVYENLYGSTKSQTVNNNYD
SSGQAPSYSDSHSSYANYSSGVDTGQSASTDQDSTASSHRPATPSSSSDA
LAADESSSSGSGSLVPPANINPQT
>SPy0531 acpA, putative ribonuclease III
MKQLEELLSTSFDIQFNDLTLLETAFTHTSYANEHRLLNVSHNERLEFLG
DAVLQLIISEYLFAKYPKKTEGDMSKLRSMIVREESLAGFSRFCSFDAYI
KLGKGEEKSGGRRRDTILGDLFEAFLGALLLDKGIDAVRRFLKQVMIPQV
EKGNFERVKDYKTCLQEFLQTKGDVAIDYQVISEKGPAHAKQFEVSIVVN
GAVLSKGLGKSKKLAEQDAAKNALAQLSEV
>SPy0092 adcR, putative repressor protein
MGILEKKLDNLVNTILLKAENQHELLFGACQSDVKLTNTQEHILMLLSQQ
RLTNTDLAKALNISQAAVTKAIKSLVKQDMLAGTKDTVDARVTYFELTEL
AKPIASEHTHHHDETLNVYNRLLQKFSAKELEIVDKFVTVFAEELEG
>SPy2150 ahrC, putative arginine repressor
MNKMERQQQIKRIIQAEHIGTQEDIKNHLQKEGIVVTQATLSRDLREIGL
LKLRDEQGKLYYSLSEPVATPFSPEVRFYVLKVDRAGFMLVLHTNLGEAD
VLANLIDNDAIEDILGTIAGADTLLVICRDEEIAKRFEKDLAAGL
>SPy1362 birA, putative biotin operon repressor
MKTSEKIYQLLSQTDDFVSGEYLADQLSISRTSVWKSIKSLENQGIQIDS
LKHKGYRMVQGDILLPKTISQGLGMPVTYTPHSQSTQLDAKQGIEAHNSA
PRLYLAPSQEAAKGRLDRQFFSASTGGIYMSMYLKPNVPYADMPPYTMMV
ASSIVKAISRLTGIDTEIKWVNDIYLGNHKVAGILTEAITSVETGLITDV
IIGVGLNFFVTDFPEAIAQKAGSLFTEKPTITRNDLIIDIWKLFLSIPVK
DHVKVYKEKSLVLNKQVTFIENSQEKRAIAIDLTDQGHLIVQFENGDLQT
LRSGEISLSSWEN
>SPy2163 cadC, putative cadmium efflux system accessory
MKKDSICQVGVINQQNVTTATNYLEKEKVQKSLRILSKFTDNKQINIIFY
LLAVEELCVCDIACLLNLSMASASHHLRKLANQNILDTRREGKIIYYFIK
DEEIRDFFNQLG
>SPy0514 ccpA, catabolite control protein A
MNTDDPLTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDY
RPNAVARGLASKKTTTVGVVIPNIANSYFSILAKGIDDIAAMYKYNIVLA
SSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAG
TVDLDHQLPSVNIDYRAAVSNVVDILAENHKCIAFVSGPLIDDINGKVRL
AGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSGATAAYVAEDE
LAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGA
VSMRMLTKIMNKEELEEKEILLNHGIKKRGTTK
>SPy1777 codY, putative transcriptional pleiotropic repressor
MPNLLEKTRKITSILQRSVDSLETELPYNTMASRLADIIDCNACIINGGG
TLLGYAMKYKTNTDRVEEFFEAKQFPDTYVKAASRVYDTEANLSVENELT
IFPVESKDTYPGGLTTIAPIYGGGMRLGSLIIWRNDNEFSDDDLILVEIS
STVVGIQLLNLQTENLEDTIRKQTAVNMAINTLSYSEMKAVAAILGELDG
NEGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVIN
EGIFAKLKEF
>SPy1717 copY, putative negative transcriptional regulator-cpooer transport operon
MQQISAAEWEVMRVVWASGDIKSSDIITILRKKYQWSDSTIKTLIGRLVK
KNFLTSYRQGRAYIYQALLDETLLQKEALATVLDGICQRQHTRLLLERLY
HLPMTLEEIGAFQELLEVKKENAVLEVPCNCLPGQCHCQRKETY
>SPy0898 cpsY, putative transcriptional regulator
MRIQQLHYIIKIVECGSMNEAAKQLFITQPSLSNAVKDLEMEMGITIFNR
NPKGITLTKDGVEFLSYARQIIEQTSLLEDRYKNHNTGRELFSVSSQHYA
FVVNAFVSLLKRTDMTRYELFLRETRTWEIIDDVKNFRSEIGVLFINDYN
RDVLTKLFDDNHLTASPLFKAQPHIFVSKSNPLATKSLLSMDDLRDFPYL
SYDQGIHNSFYFSEEMMSQMPHNKSIVVSDRATLFNLMIGLDGYTVASGI
LNSNLNGDQIVAIPLDVPDEIDIVFIKHEKANLSKMGERFIEYLLEEVTF
D
>SPy2077 csp, putative cold shock protein
MAQGTVKWFNAEKGFGFISTENGQDVFAHFSAIQTNGFKTLEEGQKVAFD
VEEGQRGPQAVNITKLA
>SPy2074 ctsR, putative transcriptional regulator
MPTKNTSDSIEEYIKELLAKSGIAEIKRSMLADSFQVVPSQINYVIKTRF
TESRGYEVESKRGGGGYIRIAKVHFSDKHHLIGNLMATIEDCISEQVFTD
SIQLLFDEHLLTEREGNIILAVASDDVLGTDGSTIRARMLYRLLQRIDRK
GSN
>SPy1415 deaD, putative ATP-dependent RNA helicase
MKFTEFNLSQDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTG
KTAAFGLPTLNKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKV
RSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALILDHVETLILD
EADEMLNMGFLEDIEAIISRVPADRQTLLFSATMPAPIKQIGVKFMKDPE
HVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPELSIVFGRTKR
RVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGY
LSMIENLTKKQMKPLRPATAEEAFQAKKKVALKKIERDFADETIRSNFDK
FKGDAVQLAAEFTPEELALYILSLTVQDPDSLPEVEIAREKPLPFKYVGG
GHGNKNGKGGRGRDNRNRGDRRGGYRGDRNRDERDGDRRRQKRDKRDGHD
GSGNRDFKRKSKRNSKDFFNKEKKSSAKNTGFVIRHKGE
>SPy1369 deaD2, putative RNA helicase
MITKFPPQWQEKLDQVAFTHLTPIQEQAFQPIVDGKNFLGISPTGTGKTL
AYVFPNLLALTPKKSQQLLILAPNTELAGQIFEVTKDWAQPLGLTAQLFI
SGTSQKRQIERLKKGPEILIGTPGRIFELIKLKKIKMMSVNTIVLDEYDE
LLGDSQYDFVQKISHYVPRDHQMVYMSATNKVDQTSLAPNTFCIDLSEQT
NDAIQHFYLMVDKRERTDLLRKFTNIPHFRALVFFNSLSDLGATEERLQY
NGAAAVSLASDINVKFRKTILEKFKSHQLSLLLATDLVARGIDIDNLDYV
IHFDVARDKENYTHRAGRTGRMGKSGIVITFVSHPEDLKKLKKFAKVSEI
SLKNQQLHFIN
>SPy0649 dinG, putative ATP-dependent DNA helicase
MFCFIDIACYNRLTMTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGN
KIIDSYETDVNPHESLDEHIVHLTGITDKQLAKAPDFGQVAHHIYQLIED
CIFVAHNVKFDANLLAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLS
HLSRQLNIDLAEAHTAIADARATAILFLRLLQKIESLPIECLESLLVYSD
SLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKALKPYQISKSFP
INMALLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLL
AKEDQNQIIVSVPTKLLQDQLMAGEVAAIQEQFHIACHSLKGPANYLKLD
SFADSLDQNDQNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQL
KHDGDIKQSSEFYDYDFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFAR
NKVLVFDEAQKLMLQLDQLSRHQLNLTVFLQTIQAKLSNPLPLLEKRLLE
SLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATS
DGDYWLSSEKQEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISS
EVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIA
KRIESLKQEGYPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIK
KRFDQGEQTILLGLGSFWEGVDFIQADRMITLIARLPFDNPEDFFVKKMS
HYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTK
SYGQVILEGLGQEFLISQQNFHDCLVETDCFLI
>SPy1013 fbp, putative fibronectin-binding protein-like protein A
MSFDGFFLHHLTNELKENLLYGRIQKVNQPFERELVLTIRNHRKNYKLLL
SAHPVFGRVQITQADFQNPQVPNTFTMIMRKYLQGAVIEQLEQIDNDRII
EIKVSNKNEIGDAIQATLIIEIMGKHSNIILVDRAENKIIESIKHVGFSQ
NSYRTILPGSTYIEPPKTAAVNPFTITDVPLFEILQTQELTVKSLQQHFQ
GLGRDTAKELAELLTTDKLKRFREFFARPTQANLTTASFAPVLFSDSHAT
FETLSDMLDHFYQDKAERDRINQQASDLIHRVQTELDKNRNKLSKQEAEL
LATENAELFRQKGELLTTYLSLVPNNQDSVILDNYYTGEKIEIALDKALT
PNQNAQRYFKKYQKLKEAVKHLSGLIADTKQSITYFESVDYNLSQASIDD
IEDIREELYQAGFLKSRQRDKRHKRKKPEQYLASDGTTILMVGRNNLQNE
ELTFKMAKKGELWFHAKDIPGSHVIIKDNLDPSDEVKTDAAELAAYYSKA
RLSNLVQVDMIEAKKLHKPSGAKPGFVTYTGQKTLRVTPDQAKILSMKLS
>SPy1529 glcK, glucose kinase
MSQKLLGIDLGGTTIKFGILTAAGEVQEKWAIETNILEGGKHIVPDIIAS
IKHRLDLYGLSSADFVGIGMGSPGAVDRDTNTVTGAFNLNWKETQEVGSV
VEKELGIPFAIDNDANVAALGERWVGAGENNPDVVFMTLGTGVGGGIIAD
GNLIHGVAGAGGEIGHMIVEPENGFACTCGSHGCLETVASATGVVKVARL
LAEAYEGDSAIKAAIDNGEGVTSKDIFMAAEAGDSFADSVVEKVGYYLGL
ASANISNILNPDSVVIGGGVSAAGEFLRSRIEKYFVTFTFPQVRYSTKIK
IAELGNDAGIIGAASLARQFITK
>SPy0349 greA, putative transcription elongation factor
MFVFLIRSKKKREKTIMAEKTYPMTLTEKEQLEKELEELKLVRRPEIVER
IKIARSYGDLSENSEYDAAKDEQAFVEGQISTLETKIRYAEIIDSDAVAK
DEVAIGKTVIVQEVGTTDKDTYHIVGAAGADIFSGKISNESPIAQALIGK
KTGDKVRIESPAATYDVEIISVEKTN
>SPy1763 hrcA, putative heat shock transcription repressor protein
MITQRQNDILNLIVELFTQTHEPVGSKALQRTIDSSSATIRNDMAKLEKL
GLLEKAHTSSGRMPSPAGFKYFVEHSLRLDSIDEQDIYHVIKAFDFEAFK
LEDMLQKASHILAEMTGYTSVILDVEPARQRLTGFDVVQLSNHDALAVMT
LDESKPVTVQFAIPRNFLTRDLIAFKAIVEERLLDNSVIDIHYKLRTEIP
QIVQKYFVTTDNVLQLFDYVFSELFLETVFVAGKVNSLTYSDLSTYQFLD
NEQQVAISLRQSLKEGEMASVQVADSQEAALADVSVLTHKFLIPYRGFGL
LSLIGPIDMDYRRSVSLVNIIGKVLAAKLGDYYRYLNSNHYEVH
>SPy1712 lacR.1, putative lactose phosphotransferase system repressor protein
MLKRERLLKITEIVNEQGIVTVNDIIQTLNVSDMTVRRDLDELEKAGKLI
RIHGGAQSITMPNKKERSNIEKQTVQTKEKWELASYATQLVNDGETIFIG
PGTTLECFAEQLKNRQIRIVTNSLPVFNILQDSETIDLILIGGEYRSITG
AFVGSLASQNISSLKFAKAFISCNGIYKNDIATYSETEGEIQKLAFNNSI
EKYLLVDNQKFNAYDFFIFYHLNNIDAVVTDSQITEDVIERYSQFTQLLV
AHENKE
>SPy1924 lacR.2, putative lactose phosphotransferase system repressor protein
MKKKERHEKILDILKVDGFIKVKDIIDEMNISDMTARRDLDTLADKGLLI
RTHGGAQYLDYSSAKDEGHEKTHTEKKVLQTTEKKQIAQRAKNIIKDGET
VFIGPGTTLEHLAVELKNRNIRVITNSLPVFLILHPSTTIDLILIGGECR
EITGAFVGAIAINNLETLTFSKAFVSANAVYNNSIATYSDLEGEVQRVAL
NNAVEKILLVDSTKFESYDFYNFYQLDQVDLIVTDKNVTTDIIEKYKKFS
KIIIADK
>SPy0571 licT, putative transcription antiterminator
MLIKRVLNHNAAISTNHQGLDILLMGKGITFGKKVGDSIELNAIETSFVL
KNSDNMNRFTELFITVPQEVVACSERIINLGKIKLGKTLDEILYINLTDH
IHSAIERHEQGMLIHNPLRWEIQRYYPDEYSLGVKALELIERNLGVTLAI
DEAAFIAMHFVNASLDTPFKEPHRLTEIVSYIEQKIKTDFKTELDDTSID
YYRFMTHIKLFAQRVLSQMSYDDDDAELLLVVKTKYPKEYRCVLDISEEI
KKRYNYHLNSSELLYLTVHVKRLVKHLKET
>SPy1293 malR, putative maltose operon transcriptional repressor
MVTIKDVAQKAGVNPSTVSRVLKDNRSISMKTKEKVRKAMADLGYVPNVA
AQILASGLTHNIGLVFPPITTSDRLSEPFFMEILSTITNEAKESHFTVSI
ATGISLDDLIEQVKLMHLQKRVDGFIILYSDQDDPVKKYLMTNNLPFVIV
GAPQGDTNKTTYIDNDNQLMAKTAVEHLYQKGHHNILFITDDLLSEVTSE
RYLGYLKGCFKRSLKTKPMLLFDRKDPVSVEILMETISSFKATALVVVGD
VLAIRMVQLLSFYDIKVPDDMSIITFNNSNYAKLIHPYLTTFDINVENLG
KMSFKQLLDIINSNEQNLSQTIFVPFSLKQRESVRDISH
>SPy2019 mga, M protein trans-acting positive regulator
MYVSKLFTSQQWRELKLISYVTENADAIGVKDKELSKALNISMLTLQTCL
TNMQFMKEVGGITYKNGYITIWYHQHCGLQEVYQKALRHSQSFKLLETLF
FRDFNSLEELAEELFVSLSTLKRLIKKTNAYLMHTFGITILTSPVQVSGD
EHQIRLFYLKYFSEAYKISEWPFGEILNLKNCERLLSLMIKEVDVRVNFT
LFQHLKILSSVNLIRYYKGHSAVYDNKKTSQRFSQLIQSSLEFQDLSRLF
HLKFGLYLDETTIAEMFSNHVNDQLEIGYAFDSIKQDSPTGCRKVTNWVH
LLDELEIRLNLSVTNKYEVAVILHNTTVLKEEDITANYLFFDYKKSYLNF
YKQEHPHLYKAFVAGVEKLMRSEKEPISTELTNQLIYAFFITWENSFLKV
NQKDEKIRLLVIERSFNSVGNFLKKYVGEFFSITNFNELDALTIDLEEIE
KQYDVIVTDVMVGKSEELEIFFFHKMIPEAIIDKLNAFLNISFADSLPLD
KPINPLDFHRKEVILPTPPNKLHAPPSTT
>SPy0496 mutR, putative positive transcriptional regulator
MEKELGKTLRRLRKGKQVSISFLADEYLSKSQISRFERGESEITCSRLLN
LLDKLNITIDEFVSAHSKTHTHFFTLLSQARKCYAEKNVVKLTKLLKDYA
HKDYERTMIKAILFSIDSSIAPSQEELTRLTDYLFKVEQWGYYEIILLGN
CSRFMNYNTLFLLTKEMVASFAYSEQNKTNKMLVTQLSINCLIISIDHSC
FEHSRYLINKIDLLLRDELNFYEKTVFLYVHGYYKLKQEEMSGEEDMRQA
LQIFKYLGEDSLYYSYKEHYRQIVLGGKGDEDWSEADL
>SPy1724 nusA, transcription termination-antitermination factor
MSKEMLEAFRILEEEKHIDKADIIDAVTESLKSAYKRRYGQSESCVIEFN
EKTADFQVFTVREVVEEVFDSRLEISLKDALAISSAYELGDKIRFEESVN
EFGRVAAQSAKQTIMEKMRRQMREVMFNEYKEHEGEIMTGTVERFDQRFI
YVNLGSLEAQLSHQDQIPGETFKSHDRIDVYVYKVENNPKGVNVFVSRSH
PEFIKRIMEQEIPEVFDGTVEIMSVSREAGDRTKVAVRSHNPNVDAIGTI
VGRGGSNIKKVISKFHPKRVDAKTGLEIPVEENIDVIQWVDDPAEFIYNA
IAPAEVDMVLFDDEDLKRATVVVPDSKLSLAIGRRGQNVRLAAHLTGYRI
DIKSASEYDRLEAEKEAATAVEEPVVDDVMTAEEV
>SPy1818 nusB, putative transcriptional terminator
MTNSFQNSRRDLRERAFQALFNIEMGAELLAASQFAYGYDKVTGEDAQVL
ELPIFLLSLVTGVNNHKEELDNLISTHLKKGWSLERLTLTDKTLLRLGLF
EIKYFDKTPDRVALNEIIEVVKKYSDETSAKFINGLLSQYVSGAPSANKS
>SPy0164 nusG, putative transcription antitermination factor
MLDSFDKGWFVLQTYSGYENKVKENLLQRAQTYNMLDNILRVEIPTQTVN
VEKNGQTKEIEENRFPGYVLVEMVMTDEAWFVVRNTPNVTGFVGSHGNRS
KPTPLLEEEIRAILLSMGQTIDVFDTNIKEGDVVQIIDGAFMGQEGRVVE
IENNKVKLMLNMFGSETVAEVELYQIAEL
>SPy1350 psr, putative PBP 5 synthesis repressor
MTKYPMGGLSHHEELRYFYLLRNLSYLSENEKKEFAFLKSKLEIGRAYAP
SKQHYRKSKRQEPYFEDDYYNDYSPNDLLEDDDVNHDSSFVPYGLPIYPK
EDRYLNKKTKLTARRPIDAPQPIDEDDAFLTESVARCALPRSQKRKHKKK
GCMKWFFNILGLLLMTVLMGLGLMFAKGVFDISTNKANYKPAVSQAFDGQ
ETQDGTNILILGSDQRVTQGSTDARTDTIMVVNVGNHAKKIKMVSFMRDT
LINIPGYSYNDNSYDLKLNSAFNLGEQEDHHGAEYVRRALKHNFDIDIKY
YVMVDFETFAEAIDTLFPNGVKIDAKFATVGGVAVDSVEVPDDLRMKNGV
VPNQTIEVGEQRMDGRTLLNYARFRKDDEGDFGRTVRQQQVMSAVMSQIK
DPTKLFTGSAAIGKIYALTSTNVSFPFVVKNGVSVLGSGKNGVEHVTIPE
NGDWVDEYDMYGGQALYIDFDKYQKTLAKLGLR
>SPy1785 recG, putative ATP-dependent DNA helicase
MILTAPMSNLKGFGPKSAEKFQKLDIYTVEDLLLYYPFRYEDFKSKSVFD
LVDGEKAVITGLVVTPANVQYYGFKRNRLSFKLRQGEAVLNVSFFNQPYL
ADKIELGQEVAVFGKWDATKSAITGMKVLAQVEDDMQPVYRVAQGISQST
LIKAIKSAFEIDAHLELKENLPATLLEKYRLMGRSQACLAMHFPKDITEY
KQALRRIKFEELFYFQMNLQVLKAENKSETNGLPILYSKRAMETKISSLP
FILTNAQKRSLDDILSDMSSGAHMNRLLQGDVGSGKTVIAGLSMYAAYTA
GFQSALMVPTEILAEQHYISLQELFPDLSIAILTSGMKAAVKRTVLAAIA
NGSVDMIVGTHALIQDSVQYHKLGLVITDEQHRFGVKQRRIFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSIIDELPAGRKPIMTRWVKHEQLGTVL
EWVKGELQKDAQVYVISPLIEESEALDLKNAVALHAELSTYFEGIAKVAL
VHGRMKNDEKDAIMQDFKDKKSHILVSTTVIEVGVNVPNATIMIIMDADR
FGLSQLHQLRGRVGRGYKQSYAVLVANPKTDSGKKRMTIMTETTDGFVLA
ESDLKMRGSGEIFGTRQSGIPEFQVADIVEDYPILEEARKVSAAIVSDPN
WIYEKQWQLVAQNIRKKEVYD
>SPy0627 regR, putative transcriptional regulator (LacI family)
MQRKVTIKDIAELAKTSKTTVSFYLNGRFDKMSEETKNRISESIKATNYK
PSIAARSLNAKSTKLIGVVIGDITNSFSNQIVKGIESKAQEFGYQIIIGN
SNYDPSREDELIEKMLNLGVDGFIIQPTSNFRKYSRIIDIKKKKVVFFDS
QLYEHRTNWVKTNNYDAVYDTIQQCIDKGYEHFIMITGNPNLLSTRIERA
SGFIDVLEANHLTHQEMIIDENQTSSEAIAQFLQGSLTKKSLVFVPNCWA
LPKVFTAMKSLKFNIPEIGLVGFDNIEWTKFSSPTLTTIIQPAYEEGEQA
TKILIDDIEGHSQEAKQQIFDCQVNWQESTF
>SPy1981 relA, (p)ppGpp synthetase
MRNEMAKIMNVTGEEVIALAATYMTKADVAFVAKALAYATAAHFYQVRKS
GEPYIVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDITLDEIEADFGH
DARDIVDGVTKLGEVEYKSHEEQLAENHRKMLMAMSKDIRVILVKLADRL
HNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDLAFRYLN
ETEFYKISHMMKEKRREREALVEAIVSKVKTYTTQQGLFGDVYGRPKHIY
SIYRKMRDKKKRFDQIFDLIAIRCVMETQSDVYAMVGYIHELWRPMPGRF
KDYIAAPKANGYQSIHTTVYGPKGPIEIQIRTKDMHQVAEYGVAAHWAYK
KGVRGKVNQAEQAVGMNWIKELVELQDASNGDAVDFVDSVKEDIFSERIY
VFTPTGAVQELPKESGPIDFAYAIHTQIGEKATGAKVNGRMVPLTAKLKT
GDVVEIITNANSFGPSRDWVKLVKTNKARNKIRQFFKNQDKELSVNKGRD
LLVSYFQEQGYVANKYLDKKRIEAILPKVSVKSEESLYAAVGFGDISPIS
VFNKLTEKERREEERAKAKAEAEELVKGGEVKHENKDVLKVRSENGVIIQ
GASGLLMRIAKCCNPVPGDPIDGYITKGRGIAIHRSDCHNIKSQDGYQER
LIEVEWDLDNSSKDYQAEIDIYGLNRSGLLNDVLQILSNSTKSISTVNAQ
PTKDMKFANIHVSFGIPNLTHLTTVVEKIKAVPDVYSVKRTNG
>SPy2042 ropB, putative transcription regulator
MEIGETVEFIRHSKNISIKQVCGDYLTRQTYYRFIKNNLDISSKKLLYIL
DNLNVNVDEFLFISNNFKQYKEFIDMDTAKHYFECRNIEGLNHILDSYKD
SKSTKEKNLFALVKVLLATLTEEDCLTERTYLSNYLINIETWSHYETVLF
NNCMFIFESCFIEMVFSKVILNLDKYNTLRYYGNESIRMFVNMLILFIQR
QEYDKASEILAKIEDYQLNDDCLYERCCVSFFDGIIGLINGKEGAEQKCV
QILEIFQLLNCKTIHHMFQTYLEAIKHKLS
>SPy0080 rpoA, DNA-directed RNA polymerase alpha subunit
MIEFEKPIITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAA
VTSIKIDGVLHEFDTIPGVREDVMQIILNVKGLAVKSYVEDEKIIELEVE
GPAEVTAGDILTDSDIELVNPDHYLFTIAEGHSLRATMTVAKKRGYVPAE
GNKKDDAPVGTLAVDSIYTPVKKVNYQVEPARVGSNDGFDKLTIEIMTNG
TIIPEDALGLSARVLIEHLNLFTDLTEVAKATEVMKETEKVNDEKVLDRT
IEELDLSVRSYNCLKRAGINTVFDLTEKSEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
>SPy0098 rpoB, putative DNA-dependent RNA polymerase subunit beta
MAGHEVRYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDSGLKEVFE
DVLPISNFTDTMELEFVGYEFKEPKYTLEEARIHDASYSAPIFVTFRLVN
KETGEIKTQEVFFGDFPIMTEMGTFIINGGERIIVSQLVRSPGVYFNDKV
DKNGKVGYGSTVIPNRGAWLELETDSKDIAYTRIDRTRKIPFTTLVRALG
FSGDDEIVDIFGESDLVRNTIEKDIHKNPSDSRTDEALKEIYERLRPGEP
KTADSSRSLLIARFFDARRYDLAAVGRYKVNKKLNIKTRLLNQIIAENLV
DAETGEILVEAGTEMTRSVIESIEEHLDGDLNKFVYTPNDYAVVTEPVVL
QKFKVVSPIDPDRVVTIVGNANPDDKVRALTPADILAEMSYFLNLAEGLG
KVDDIDHLGNRRIRAVGELLANQFRIGLARMERNVRERMSVQDNDVLTPQ
QIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRRLSALGPGGLTR
DRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGHLNKYGFIQTP
YRKVDRATGTVTNEIVWLTADEEDEYTVAQANSKLNEDGTFAEEIVMGRH
QGNNQEFSASVVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQ
AVPLIDPKAPYVGTGMEYQAAHDSGAAVIAQQNGKVVFSDAEKVEIRRQD
GSLDVYHITKFRRSNSGTAYNQRTLVKVGDIVEKGDFIADGPSMENGEMA
LGQNPVVAYMTWEGYNFEDAVIMSERLVKEDVYTSVHLEEFESETRDTKL
GPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVGKVTPKGEKDL
SAEERLLHAIFGDKSREVRDTSLRVPHGGDGIVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVD
IMLNPLGVPSRMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWDTV
REAGMDSDAKTVLYDGRTGEPFDNRVSVGVMYMIKLHHMVDDKLHARSVG
PYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASNVLQEILTYKSDDVT
GRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRVLDEDDNEVEL
RDLDEGEDDDIMHVDDLEKAREKQAQETQEVSETTDEK
>SPy0099 rpoC, DNA-dependent RNA polymerase, B' subunit
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEV
IFGPTKDWECACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAP
VSHIWYFKGIPSRMGLTLDMSPRALEEVIYFAAYVVIDPKDTPLEPKSLL
TEREYREKLQEYGHGSFVAKMGAEAIQDLLKRVDLAAEIAELKEELKSAS
GQKRIKAVRRLDVLDAFNKSGNKPEWMVLNILPVIPPDLRPMVQLDGGRF
AASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPT
LKMYQCGVPREMAIELFKPFVMREIVAKEYAGNVKAAKRMVERGDERIWD
ILEEVIKEHPVLLNRAPTLHRLGIQAFEPVLIDGKALRLHPLVCEAYNAD
FDGDQMAIHVPLSEEAQAEARLLMLAAEHILNPKDGKPVVTPSQDMVLGN
YYLTMEDAGREGEGMIFKDKDEAVMAYRNGYAHLHSRVGIAVDSMPNKPW
KDNQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPG
QDIQEVIDRLDINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYY
HSTLAGLTVGIADIPVIDNKAEIIDAAHHRVEEINKAFRRGLMTDDDRYV
AVTTTWREAKEALEKRLIETQDPKNPIVMMMDSGARGNISNFSQLAGMRG
LMAAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMTDTALKTADSGY
LTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETLEERLQGRYTR
KSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTD
ITQGLPRIQEIFEARNPKGEAVITEVKGNVVEIEEDASTRTKKVYVQGKT
GMGEYVIPFTARMKVEVGDEVNRGAALTEGSIQPKRLLEVRDTLSVETYL
LAEVQKVYRSQGVEIGDKHVEVMVRQMLRKVRVMDPGDTDLLPGTLMDIS
DFTDANKDIVISGGIPATSRPVLMGITKASLETNSFLSAASFQETTRVLT
DAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAMNEIEVIDHT
EVSAEAVFTAEAE
>SPy0782 rpoD, putative RNA polymerase sigma 42 protein
MTKQKEITTFNVQVAEFIRHHKKEGTAIDDDVTEKLVIPFALDADQIDDL
LERLTDGGISITDKEGNPSSKYIVEEPKPEELTDEELIGSNSAKVNDPVR
MYLKEIGVVPLLTSEEEKELAVAVAKGDLMAKQRLAEANLRLVVSIAKRY
VGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIA
DQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIAERMEMTPDKV
REILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKA
LRKLRHPSRSKQLRDFIED
>SPy1895 rpoE, putative DNA-directed RNA polymerase (delta subunit)
MKLDVFAGQEKSELSMIEVARAILEERGRDNEMYFSDLVNEIQNYLGKSD
AGIRHALPFFYTDLNTDGSFIPLGENKWGLRSWYAIDEIDEEIITLEEDE
DGAQKRKKKRVNAFMDGDEDAIDYRDDDPEDEDFTEESAEVEYDEEDPDD
EKSEVESYDSELNEIIPEDDFEEVDINEEDEEDEEDEEPVL
>SPy1908 salR, putative response regulator of salavaricin regulon
MKILLIDDHRLFAKSIQLLFQQYDEVDVIDTITSHFNDVTIDLSKYDIIL
LDINLANISKENGLEIAKELIQSTPHLKVVMLTGYVKSIYRERAKKVGAY
GFVDKNIDPKQLISILKKVDSGKKYFEQIESQDYVESLTDQEIAILNLSK
KGFSIKEIEETLQISRRTVFNHLTHIYSKLLVNNKQEAIYKAEQLGYFMD
F
>SPy1811 scrK, putative fructokinase
MGKLYGSIEAGGTKFVCAVGDEEFTVVDKTQFPTTTPEETIARTIAYFKA
FEADLAGMAIGSFGPIDIDPSSETYGYITTTPKSGWANVDLLGQLSAAFK
IPFDVTTDVNSSAYGEVLARPGVESLVYYTIGTGIGAGAIQHGHFIGGLG
HTEAGHTYVMPHPDDMAKGFLGVCPFHKGCLEGMAAGPSIEARTGVRGER
LDQEADVWDIQAFYIAQAALQATMLYRPQVIVFGGGVMAQEHMVLRVHDK
FTALLSGYLPVPDLTDYIVTPAVADNGSATLGNFALAKLAAQGK
>SPy1817 scrR, putative sucrose operon repressor
MVAKLTDVAALAGVSPTTVSRVINKKGYLSQKTVNKVNKAMRELGYKPNN
LARSLQGKSTQLIGLIFPNISNIFYAELIEHLEIELFKQGYKTIICNSEH
NPVKEREYLEMLAANQVDGIISSSHNLGIEDYERVEAPIVAFDRNLAPNI
PVISSDNFEGGKLAAQTLQKHGCQNIVMITGNDNSDSPTGLRQLGFNYQL
KRSAEIIKLPNNLSPVRREMEIKSILATRKPDGLFVSDDLTAILIMKVAK
QLHITIPEDMKVIGYDGTTFIQQYVPQLATIRQPIDEIAKLSVEILIKKI
KKEKTSKDYILPITLLPGASI
>SPy0342 snf, putative SNF helicase
MMARLIPGRVRNEGIKLYEQGLVSFQDDNKGILQIEVETYQVQYGADDED
ITCQCDTFHMKHYCKHIAAVEYFLKNDQKGKLFLKQLTNQTKIKETTKKM
TSFGSLFLDSLAMNEDDSVKYRLSALGSRSPFSSDYWWSLKINRLPDDRS
YVIRDIKGFLQLIKKEGFYQIGKNYFEQLSWLQFDPSSQALIEFLWRLAS
DTDKGDNENIFPNHARHLRLPSGFFEEGIHYLTSLYDFTFEGPSQTYHHL
FVRSLEAEAGLYEFKVEVHRKSIELQIAEKNVQYLFDNDYLLYQDTFYHL
TLKQRKMVQAIRSLPIEADLAKHIHFDLDDHAKLAASLSDFKQIGLVEAP
KSFAIRDFEVTFQFDLLNRDEISCQLMFDYGNYQVSDKASLEALPFASHL
KKEEKINRSLLAFGFSPQFYSKKRLTSAKELYTFFEETVPCFERLGNVAL
STAIQALQVKEMPKIAIRRNQGLLDISFDFSTIIENDIDQAVTALFQNNP
YFVSQTGQLVVFDDETQKVSKSLQELRARQLKNGHLQLDGIRALQVSKLF
EGMTSVHFSKELEELAYHLQHPETFSIKPLPVKAQMRDYQRNGVQWLSML
NHYGFGGILADDMGLGKTLQTLAFLASHLKSDSKVLILSPSSLIYNWFDE
CQKFTPQLDVVVSYGLKQIRDQIIEEGHQITITSYSSFRQDFETYQAFHY
DYLILDEAQVIKNAQTKISHCLRAFNTANCFALSGTPIENKMLEIWSIFQ
IVLPGLLPTKKEFLKLTAEQVSRYIKPFVMRRKKEDVLPELPDLIEINYS
NEMTDEQKAIYLAQLRQMQDQIRNSSDVDISRQKIEILSGITRLRQICDT
PSLFMDYQGKSGKLDSLRILLTQIKENGHRALIFSQFRGMLDLAKQEMTA
LGLTSYQMTGSTPANERQEMTRAFNNGSKDAFLISLKAGGVGINLTGADT
VILIDLWWNPAVEMQAISRAYRIGQKENVEVYRLITRGTIEEKILELQES
KRNLVTTVLDGNESRASMSIEEIKEILGLNTH
>SPy2217 spoJ, putative chromosome segregation protein
MFLILSRNSLMTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSN
GLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAIIKKISTLESMQ
QAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTL
RLLQLPAPIIKAIEEGKISAGHARALLTLSDDKQQLYLTHKIQNEGLSVR
QIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK
>SPy1081 srtR, putative DNA binding regulatory protein-lantibiotic associated
MYKILAIDDDKEILKLMKTALEIENYHVITCQEIELPIVFDDFKGYDLIL
LDIMMPNISGTEFCYKIREEVHSPIIFVSALDGDNEIVQALNIGGDDFIV
KPFSLKQFVAKVNSHLKREERAKIKNEAEERVKRSFPPIEIYLEERMLYI
DKQPLFLTYREYEILELLSRHPYKVFTKEEIYEQVYSDEASALFHSISEY
IYQIRMKFSSFGINPIKTIRGIGYKWDV
>SPy0008 trcF, putative transcription-repair coupling factor
MDILELFSQNKKVQSWHSGLTTLGRQLVMGLSGSSKTLAIASAYLDDQKK
IVVVTSTQNEVEKLASDLSSLLDEELVFQFFADDVAAAEFIFASMDKALS
RIETLQFLRNPKSQGVLIVSLSGLRILLPNPDVFTKSQIQLTVGEDYDSD
TLTKQLMTIGYQKVSQVISPGEFSRRGDILDIYEITQELPYRLEFFGDDI
DSIRQFHPETQKSFEQLEGIFINPASDLIFEVSDFQRGIEQLEKALQTAQ
DDKKSYLEDVLAVSKNGFKHKDIRKFQSLFYEKEWSLLDYIPKGTPIFFD
DFQKLVDKNARFDLEIANLLTEDLQQGKALSNLNYFTDNYRELRHYKPAT
FFSNFHKGLGNIKFDQMHQLTQYAMQEFFNQFPLLIDEIKRYQKNQTTVI
VQVESQYAYERLEKSFQDYQFRLPLVSANQIVSRESQIVIGAISSGFYFA
DEKLALITEHEIYHKKIKRRARRSNISNAERLKDYNELAVGDYVVHNVHG
IGRFLGIETIQIQGIHRDYVTIQYQNSDRISLPIDQISSLSKYVSADGKE
PKINKLNDGRFQKTKQKVARQVEDIADDLLKLYAERSQQKGFSFSPDDDL
QRAFDDDFAFVETEDQLRSIKEIKADMESMQPMDRLLVGDVGFGKTEVAM
RAAFKAVNDHKQVAVLVPTTVLAQQHYENFKARFENYPVEVDVLSRFRSK
KEQAETLERVRKGQIDIIIGTHRLLSKDVVFSDLGLIVIDEEQRFGVKHK
ETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTY
VLENNPGLVREAIIREMDRGGQIFYVYNKVDTIEKKVAELQELVPEASIG
FVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFIENAD
HMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKVLTEVSEKRLEAIKGFTEL
GSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEQAIASKQGK
TTVRQKGNTEINLQIDAYLPDDYIADERQKIDIYKRIREIQSREDYLNLQ
DELMDRFGEYPDQVAYLLEIALLKHYMDNAFAELVERKNNQVIVRFEVTS
LTYFLTQDYFEALSKTHLKAKISEHQGKIDIVFDVRHQKDYRILEELMLF
GERLSEIKIRKNNSVFK
>SPy0528 vicR, two-component response regulator
MKKILIVDDEKPISDIIKFNLTKEGYDIVTAFDGREAVTIFEEEKPDLII
LDLMLPELDGLEVAKEIRKTSHVPIIMLSAKDSEFDKVIGLEIGADDYVT
KPFSNRELLARVKAHLRRTETIETAVAEENASSGTQELTIGNLQILPDAF
VAKKHGQEVELTHREFELLHHLANHMGQVMTREHLLEIVWGYDYFGDVRT
VDVTVRRLREKIEDTPSRPEYILTRRGVGYYMKSYD