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# Methylococcus capsulatus str. Bath, Bath

>MCA3069 conserved hypothetical protein
MHDDIATTVGNAAGKIWHFLDQNGEASASRLADETGLDRNEVQRAIGWLA
REGKLVTERRGRYEFFRLTAE
>MCA3039 rubisco operon transcriptional regulator
MNITLRQLKVFERVARRLSFTRAAEELYLTQPAVSMQIKQFEESIGLPLF
ERLGKKIFLTRAGEELYRLSRQISLQLDEAEQLIEELKGMEGGRLVVAVA
STVHYFAIRLLADFCKRYPKVRVNFKVTNRKGLLQMLDDNEVDTVLMGRP
PDDMDLVAEAFMDNPLVIIAPTDHPRVGEKGIRLEDLRNETFLMREQGSG
TRNAVERFFAERGVRVLASMEMNTNGAIKQGVEVGLGLGLVSIHTVEREL
ADRRVVVLDVEAFPIMRQWYIVHRAGKRLSATATAFEEFVRSEARRFVAP
FNAILGAGKEAVVGAMEY
>MCA0246 adenine-specific DNA methyltransferase
MTENTLDPAADLLERLGDKRFRTILADPPWQFQNRTGKMAPEHKRLNRYG
TMSLEAIAGLPVERLTADTAHLYLWVPNALLLEGLKVMEAWGFTYKTNLV
WHKIRKDGGPDGRGVGFYFRNVTELVLFGVRGKNARTLAAGRRQVNFLAT
RKREHSRKPDEMYGIIESCSPGPYLELFARGARDRWSVWGNEADENYYPR
WNTYANHSQAEICPFE
>MCA2812 transcriptional regulator, MarR family
MDCTGFNLRKAMRAVGQHYDDALRPAGLRGTQFSLLAAAKIAGPVTVSRL
AEMAVMDRTTLTRNLNVLEKQGLVAVVPGADRRTRRVVITERGVTVLRQA
YPLWQQAQDRLAAKLGADRLQALRENMATLVDATLPR
>MCA1523 cold shock protein
MSQVQQGTVKWFNETKGYGFIQRESGADLFVHFRSILGEGFKTLKEGQRV
SFVEVQGAKGPQADQVSVI
>MCA0833 response regulator
MREEKRAASLAVAHPIVVLLIDDQRIIGEAVRRLLKDETDIEFHFLSDPT
QALAEAERVRPTLILQDLVMPDVDGLDLVMRFREHPASRNVPLIVLSSKE
EPAVKAEAFARGANDYLVKLPDRVELIARLRYHSNAYIAQLQRDEAYGAL
AADLHEAASYVRSQLPAPIASGPIRSAWEFVPSATLGGDSFGYFDVDPGH
FAFFLLDVCGHGVGPALLSVSAMAAISRRTLPEVDFLDPTSVLGALNEAF
AMEKHNLLYFTLWYGVFERATRTVRYASAGHPPAIVVAAGSAPAELRQQA
MPIGVMSDAVFASAEFRLPPASAVYLFSDGIYEVTRPGGNEFTFGEFVDQ
LASVASAGGGPRELLAAMRGVQDCAEFEDDVSVLELKFD
>MCA1659 conserved hypothetical protein TIGR00244
MRCPFCGAQDTRVVDSRLSHEGDQVRRRRECGECKERFTTYEAAELNMPR
VVKSDGSRQPFREEKLRAGMLRALEKRPVSSDRVEAAITRIEKRLLATGE
REVQSRLVGEYVMNELSQLDDVAYVRFASVYRRFEDVNQFREVIDRLESE
PDSETAGRQADAFDA
>MCA1145 conserved domain protein
MTPREQAQLRILKNLEDSPGISQRVLAERLGISLGKTNYLLKALLEKGLI
KAGNFRRSGSKLGYLYLLTPQGIEQKLSLTRAYLARKEAEYEALRAEIAA
LHVELSTAADSHAPGEKSIQNPVTKP
>MCA1574 ATP-dependent RNA helicase, DEAD/DEAH box family
MLAPTRELALQVAEAFQSYARHLPDFHILPIYGGQSMDAQLRHLRRGVHV
IVGTPGRVIDHLRRKSLNLDGLRTLVLDEADEMLRMGFIEDVEWILEHTP
PERQIALFSATMPEAIRRVAKRHLRHPKEAKIEAKTATVEAITQRYWLGS
GAHKLDALTRILEVEDFDAMIIFVRTKVLTEELAEKLEARGYSAAALNGD
MSQALREKAVDRLKKNTLDILVATDVAARGLDVERISHVVNYDIPYDTES
YVHRIGRTGRAGRKGQAILFVTPREKRMLSAIEKATRQRITEMRLPTHQD
IAERRVEQFKAQIMTTLEEEDLEFFRRLVQQIGREQSLSPTDIAAALTYL
VQKDRPLVPEEQPAPAESPAESREPRKKFRDRDAEAGEKKRKRKDREETG
VLYRIGVGRNDGAAAKDIVGAIANEADIPGRDIGHIKLYDDFSTVSLPAD
LPKKSLKRLEKIWIVGKPIDIRLWTGGTTAPQAVEKPKRKKKGYPKKNG
>MCA2682 prophage LambdaMc01, helicase, SNF2 family
MEAATSFQPGERITHHEFGQGVVLDPARDGYLRAFFSVGERRVPVGSVRR
ELTRTERILRAVDGGADRARRAWLSYEAHALPVMESASALTSAKIDLLPH
QVVLTHRVATASPRRYLIADEVGLGKTIETALILRELASRGELNRALMVV
PAGLVNNWHRELNEVFNLDFEVFGSEGDITDRKTNAFAKHDRLIASIDTL
KRPARIKRLLDAPRWDLVVFDEAHHLTACRNGGKVRKTENYKLAEALKDH
ARDFLLLSATPHQGNHFQFWMLVQLLNPTLFRSPEEMLENRHRLNTVMFR
RTKADACQPDGSPLFARRWVHTESFVMNTGERLFYERLREYLEDGFDLAR
RQGSQGRALGFLMAIFQKIAASSFAAVRRTLKRRLLMLTIHEALLRDKEL
DIEGRERLMDEARDLIHQEFQLPRDSIGRSEVDRVLADLKYRLVKRLDEE
ALDLASDPYGSEYSATHAEDVASAVVEMHLPEERLRIGDLLKIFPVQRET
KAQKLLDGLGYLWRQNPNEKVVVFATYLGTVDLIAREIEQAYPGQGVVVL
RGGDHGAKVAAERRFRQKDGPRVLVCTAAGREGINLQFARILFNFDLPWN
PMDVEQRIGRIHRYGQNHTAQVYNLVLSDTIEGRIFLLLDEKLTEIARTV
GKVDDQGNVAEDLRAQILGQLSERLNYDRLYQEALSDPELKRTRVELEAA
LSNSREARQVVFDLFQDLEGFSLDDYKPFSDVSSSLDRLVRFLSAAAAER
QQRLIKVDDETYDLVTVDGVRRARFTLNRDTATGQDDVELLGLDHPLVQE
ELGRWRIVRPEDVGIAVTGDVDGPVLLSLWMVETSAGNGERRIVVQPIAV
KQDGTRVPAVERQAERYLQAPATSPRFTPEQRLDLFARAVEPTLQRELKH
KGAVKGDGSYSAELIGYVEIVEQGA
>MCA1939 DNA-binding response regulator
MRLLLAEDDRMIGQALCEGLNQEGFVVDWVQDGHQAELALKVAEADYALL
LLDLGLPRLSGLDLLTDLRRRGAGIPVLILTARDSLSDRVLGLNSGADDY
LVKPFELDELVARIHALVRRAAGRAEPVVEHGPLRLLPVKRECWLRGEPV
ELSAREFDLLYALLEKPGAVLSRTRLEERVYGWGQEVVSNAIDVHIHHLR
KKLGPGFIVNVRGVGYRVAQA
>MCA2535 transcriptional regulator, ArsR family
MQTDLITDESEIRRAAHSLKAMAHPLRLKILCTLSKGRINVQDLVEQVGT
TQSNVSQHLAILRDKGILSCHRDANKVYYFVEDDRMLQLVRMIKEVFCKH
>MCA0825 transcriptional regulator, AraC family
MTHDFSFLTLSMSLRIFRPSRLLAPFVSAFWDYEDLLGGDNLALSILPDT
ATYLCFLYADLLTTKHKGQTYTTRSGLAGFQSFRSDLGASGKVSGVSARL
TPWGLNVFCRGVARDCAERRVDCRDIFPKYSIEEIEDQLALKTAASERVQ
CVEQFLLSRLNVGNDDMLVRTACKALDEAGGSCRISMVARTLGLSERTLE
RRFQAHIGATPKKYARIVRLRSAILQTGKYSSWADLAYAAGYYDQSHMIH
EFREFYGMPPESIYPQVKASGTIRCSGLLNLNVAGYHSD
>MCA2883 Rrf2 family protein
MRLTTKGRYAVTAMLDLAYHSETNPVTLTDIAKRQNISLSYLEQLFARLR
RAGMVEGVRGPGGGYQLSRCASEINIAEIIAAVDEPIDSTRCGGKANCQN
NQPCLTHDLWMGLSEQIREYLASISLGEVLTRQPVRQVAERQDRQSQRRV
ELLMGQEPAKTG
>MCA0772 DNA-binding response regulator
MQAPTTRILIVDDDVEIRNLLGGYLSRFGMEAVGVHDGAAMKKALTESSF
DLVVLDLMLPGEDGLTLCRSLRGESDIPVIMLTARGDPMDRVVGLELGAD
DYVAKPFEPRELVARIQSILRRARHEREPESPESSDIAVEFEGWRLHRVL
RQLTSPEGMVVPLSNAEFRLLSVFIERPNRILTRDQLLDYARGRAMEVFD
RSIDLLVSRLRQKLQDDPKNPKLIKTIRGEGYFFSARVSKCGA
>MCA0999 transcriptional regulator, LysR family
MRFDLKDLELFVAATEAGSIAKAAERCHTVASAVSKRLSDLEAAYGTALL
LRSSKGIAPTAAGLALLGRARAVLHQAGQLEQELRGYSKGLRGRVRVFAN
ISAIVEFLPSALASFLAAHPEIEVELEERVSTDIAEAVAESRADLGILSE
LPSGSKLVAIPFREDELVLLVRPDHTLAARGSAGFGEALDSDFVGLHTDG
ALHYLMLRAAAEARRPLKLKIQVTGFDAVCAMVAAGLGIGVIPRAAAAAY
TASLGLVAVALEDAWSKRRLHICLRSKESLSAASRLLLDHLTGLPS
>MCA1339 mercuric resistance operon regulatory protein
MENTQENLTIGAFAKAAGVNVETIRFYQLKGLLPRPERPYGGIRRYGRTD
VARVKFVKSAQRLGFSLDEVGRLLKLEDGTHCSEAAELAAHRLAEVRARL
TDLQRMEAALAKLVGECKAHSGDVSCPLIAALHCC
>MCA1892 conserved hypothetical protein
METAELIEVLSRGEDSRHQFKENFTNPDALAAEIVAFSNSAGGQIFIGVQ
NDGVVIGLSHADIDRLNQLISNASSQNVRPAVNPLTENVPHPNGTVLVVT
IPEGVSKPYMDKNGAIWVKNGADKRRATSREELQRLFQQAGLVHADETPV
AGLGVGDMDMPYFAAFFEQQFGEPLTEHKQPLPQLLTNMNLMNQGRLNLA
GSLLFARAPQYALPAFIVKAVAFVGTDIEDQRYIDSRDITGKLADVFQQT
LGFIVANTRAVQGDQGFNSQGQPEIPRIVWEELVANALIHRDYFISAPVR
VLVFADRVEIISPGHLPNHLTVENIKAGNSNIRNPILASFAAKLLPYRGL
GSGILRALRAWPQIELIDDRYGNLFKAIVKRT
>MCA1651 hypothetical protein
MTQVTGLPAPVHKQQERGIAMARRITKDCDDKAAGIRFHISSARMSMNKI
SFVAFQRFLDEMERSMYLCPECGWRGRGRELVPMEQDGNGAYAWGSDAET
WYACPRCESEISVETPLMRPTD
>MCA3005 ATP-dependent RNA helicase, DEAD/DEAH box family
MLKLEQIQKNAAISGLEPGQVVRIVTTEPVGPDALTVYYKTADGKLLERM
LFRTDEAKLSLAESGRPWAFDAPGEEFKLALEAYRINLAHLFDPMMAVHT
SNVEPLPHQITAVYESMLPRQPLRFVLADDPGAGKTIMAGLYIRELLIRA
DAKRVLIVAPGSLVEQWQDEMFEKFGLSFSLFSREQVEQSRSGNPFDDID
LLVARVDQLARAEDLQEKLLLTHWDLVVVDEAHKLSASYYGNEVKKTKRF
QLGELLGSITRHFLLMTATPHNGKEEDFQLFLSLLDADRFYGKFRDGAHK
VDVTDLMRRMVKEDLLKFDGTPLFPERRAYTVNYKLSDREAALYAAVTDY
VKEQFNKADQLADGGRKGTVGFALTSLQRRLASSPEAIYQSLKRRRHKLK
RRVEEEKLGQRGKALAETLAGTGINGVPEDIWESADALSPDDYENFEEAV
VDQATAAQTIQELEAEILILEALEEQARQVVHSGQDRKWEELSRLLQDTP
DRSAGLPICTPVGRRTAGPVMDGRPEMHDAAGRQRKLIIFTEHRDTLNYL
ATKIRGLIGSIDAVVMIHGGVKREERRKVQELFRNDPAVRVLVATDAAGE
GVNLQNANLMVNYDLPWNPNRLEQRFGRIHRIGQTEVCHLWNMVASETRE
GDVFQRLFEKLEIERQALGGRVFDILGEVFEDESLKDLLIEAIRYGADPE
VRARLLRKVEGALDTGHLEDIIKRNALCEEVMDEKRLFAVKEEMEKAEAR
KLQPFFIRSFFTQAFQQLGGALKPRESGRYEITHVPAIIRERDRQITGRD
RRHADPVLRRYERICFEKPFVRLTDRVGAPMASLIHPGHPLMQSVTDLVL
EAHRNKLKQGAVLVDPSDMGLTPRVCFIIDHSVKEGADPVHVVSRRMQFV
SLFPSPPEGGEGQGEGGLKAENAGWAPHLDLEPLGDADRALIEDVLAAPW
IAKDLEQLALAHASTHLVPEHFDEVRARREKMVDKTLAAVHERLVKEINF
WSDRYIKLQDDIAAGKDVRLTLENVRRTIDDLTARRETREKELTAMRHVI
SATPVILGGALVIPAGLLLQRKGQPGWSADAGARSRIERIAMQVVMDAER
ALGHEVIDVSAERCGWDITSLPPARDGRLPPSRHIEVKGRAKGQTTITVT
RNEILYGLNQSDKFILAIVLVDGEQHEGPFYVRQPFTSEPDWAVTSINLD
LDALLARAEFPH
>MCA2959 prophage MuMc02, peptidase, family S24
MKREYQPPPEVLALIRQKLQGEPQAAHAYPTKPGGLNGDKHLQRQPAVYS
PDDYVALPLYDVRAAAGGGVVPDTENVVDFLHFKKAWLRTELRSSPDDLY
LIYVDGESMEPTLCKGDVILVNHRDKFQGRDGGIYVLRLDGALLVKRLQR
KMGGIIKVTSDNPVYEPFEVGAQDLDRADFSIIGRVVWAGRRM
>MCA2330 DNA-binding response regulator
MRILLVEDDRKAAGLLTRGLGEEGFRVDTAHSAEDTEQKNLHTGYGLIIL
DWNLPGKDGLTFCEELRKREIRTPVLMLTARDALTDRVRGLDTGADDYLT
KPFAFEELLARVRALLRRAEQARPAMLSVADLVLDPRSRRVTRSGRPLSL
TPKEYAILELLLRRAGEVVSRTQLAEEIWRTGLIALDNLIDVHISNLRRK
VDPPGVPPLIRTVRGCGFSLAAADSESP
>MCA0119 acetyltransferase, GNAT family
MDILIRPAETRDIEAMVELLGTLFSIEADFTFDPDRQRRGLALLIGSSAD
RVLVAECEGRVIGMCSVQTLISTAEGGPVGLVEDMVVAREFRGKGIGRRL
LGEIERWAADAGLTRLQLLADRTNEPALTFYGRRGWERTALIGLRKMLRD
AD
>MCA1032 S1 RNA binding domain protein
MPFIARYRKEVTGGLDDTQLRTLEVRLGYLRELNDRREVILASIAEQGKL
TTELEQAIREADTKTGLEDLYLPYRPRRRTKAQIAREAGLEPLADALLAE
PALEPLATAAGYVDAGKGVADAGAALDGARQILMERFAEEATLAGELREK
VWSEGLLVSSLVDGKAEGGAKFKDYFDYEEALAGIPSHRALALLRGRNEG
VLSLVLRVAKDEEAGHRFAEHRIASAFAIADRGRPADSWLLETVRLAWRV
KLLTRIELDLMQRLRETAEAEAIRVFASNLKDLLLAAPAGQRATLGLDPG
LRTGVKVAVVDGTGKLVATDTIYPHAPRNQWDQSIATLAALIARHGVSLV
SIGNGTASRETDQLVADLMQRHPELGVTRVVVSEAGASVYSASELAAQEF
PELDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQAQLGRTL
DAVVEDCVNAVGVDVNTASVSLLRYVSGLSPSLGRNIVEYRNQHGPFANR
EQLRQVSRLGPKAFEQAAGFLRIANGEHPLDASAVHPEAYPVVEKIVRRT
GKDIRELIGNVAFLRSVNAEQFTDERFGLPTVTDILRELEKPGRDPRPEF
KTARFKEGVTEPKDLEPGMRLEGVVTNVTNFGAFVDVGVHQDGLVHISHL
ADRFVRDPREVVKAGDVVQVKVLEVDIPRRRIALSMRSDAAKGEAEPPRR
ETGETAGKPRRRAAPQPVRQGAMAEALAQALKRGR
>MCA0993 Rrf2 family protein
MLRISKLTDYAIILLDQMARAGEQTFAAAELADQTSIAMPTTSKILKALA
RAGIVTSTRGARGGYALAQKPEHTSVARIIDAIEGPIALTECSAEQALCQ
QSSSCDVRSHWNVINRAVQTTLESVSLADMIRPVSAAPAEVPISLARLQP
QPR
>MCA1764 DNA-binding response regulator
MRILLVEDDETLADGLSRSLAEDGFDLTVAATGTYADSALRTQDYDLVIL
DLGLPDIDGKEVLRQLRVRKSPVPVLILTARDGLDDRIGGLELGADDYMT
KPFELRELEARVRALIRRSHGGFGHDIVCGPLVLNTFDRQVHVNGEPMLL
PSREYGVLEALLLQAGRVVSKDRIALRLASGGDELADNAIEVYVHRLRRR
LDDLGIRIRTVRGLGYLLERPAGE
>MCA1744 acetyltransferase, GNAT family
MQQKFHIERMDRQRLELALDWAAAEGWNPGLHDAASFFAADPSGFFMGFL
DDEPVGSISAVSYPGDFGFIGLYIVRPEHRGKGFGLKLWHTAVEHLGERT
VGLDGVIERQSSYARSGFVTAHRNIRFEWNGPAAVETDTAVGRLEPSEFD
AILAYDAALFPGSRDGFLRVWTRQPGCTGLLYRSDDGDIAGYGLLRPCRR
GYKLGPLFADTPRIAACLLQAFRPHAGTAPIYIDMPAPNTAALQLAAQHG
MRRVFETARMYTPRIPSLPLERTFGITTYELG
>MCA0792 cold shock protein
MSQQQQGTVKWFNESKGFGFIQRENGSDLFVHFRSIQGQGFKTLKEGQRV
SFTEVAGQKGPQAENVVVL
>MCA0122 conserved hypothetical protein
MNRTERFYKIDRMLHERKLVPKGAFLEALGVSDATFKRDIEYMRERLNAP
IVWDREARGYRFEPGDGPPYELPGLWFSAAELYALLAAQNLLEDIEPGFL
AAHVAPLKSRLAALLESGGHPAAEVARRVKLVSLARRPVEPRFFNEVAQA
LLQRHQLEISAWNRRRDEVNVRIVSPQRLVHYRDNWYLDAWCHWRDGLRS
FSLDTLRQVRALSTSAHEIPDEELERQYTSSYGIFSGETRHWAVLRFVPE
RARWVRNECWHRDQQGELLPDGSYRLRIPYAVEAELAMDVLRHGADVIVE
APESLRQCVRDEAWALWQNHRAPGDG
>MCA0004 ParB family protein
MKKPALGRGLEALLGEARLDPKQESLRKLPIEHLEPSPFQPRKDFDSAKL
RELADSISAQGIVQPIVVRSAEPGRYQIVAGERRWRAAQLAGVREVPVVV
REVPDQAALAIALIENIQREDLNPLEEAEAIQRLLEEHRMTHQQVADALG
KSRVTITNLNRLNDLHPDAKALLRAGEIDMGHARALLALPYGQQGEAARR
VAEKRLSVRETESLVNGLLKAADAGPKPAKVVDPDIARLERRMTERLGAG
VRIQHGAKGAGRLVISYASLEQLEGLLARFEG
>MCA2642 conserved domain protein
MSTELIPFDFEGRPVRVVTDAQGEPWFVAADVAQSLEYRMASDMTRSLDD
DEKGTQIVRTPSGNQEMLVINESGLYSAILKSRKPEAKRFKRWVTHEVLP
AIRKTGAYAAGATLPALPVPTQDRVSSILLIGEAVAKVPGVKAGIAMAAT
LTCIQENTGLAVETLRRALPAANAPICSLNATQLGKLINRSAKATNQLLA
ATGLQFRNKRDEWELTEAGEAWAEAMPYSRNGHSGYQILWNPAVVEQLKE
VA
>MCA3010 conserved hypothetical protein
MLGTRAELIEKIRLGEDSFLELEEVKFAGGKLRGPAQEDLADELAAFANS
AGGVLLLGVEDRAREVLGIPLEHLDAVEARVRQACEDSVKPPLAPVIERM
TLPDSAGAEQPVLRVEVARSLFVHQSQGGYFHRVGSSKRPMPPDHLARLF
QQRSQSRLIRFDETPVSRATLTDLDEVLWRRFAPAQSADAPEVLLGKLAM
AAQDEQDIWRPTVAGLLMASREPHRYLPGALIQAVAYAGTTVVPEGELVY
QRDAQDITGPLDEQVRMACAFVRKNMQVAAFKRADGGRVDMPQYDMTAVF
EAVVNAVAHRDYSMAGAKVRLRLFADRLELYSPGMLPNTMTPESLPFRQA
ARNEALTSLLARCPVGDDELALYRSHLMDKRGEGVSIILARSEALSGKRP
EYQMNDDSELVLTIYAARTEQEA
>MCA2652 conserved hypothetical protein
MSTMNISLPDALKAFVDEQVSQRGYGTSSEYVRELIRKDQDRQRLRGLLL
AGAASAPTAPADSDYFDSLRARVRTARG
>MCA2045 transcriptional regulator, MarR family
MEADRIYDYLERISNLIRMDARRSESFKGLQPVQLEALHYLASCNRYSNT
PLAVAEYLGLTKGTVSQTLAVLENNGLIVKESDARDRRVVHVLLTEIGRR
LLDESIPPRVLRAALRAIPQDQRPLLESALAGVLQAMQVANRLKTFGACK
SCRHHIVLEDASRRCGLTGERLFEEDAEMICREHQLPAGD
>MCA2336 conserved hypothetical protein
MNSEAEFLANHFLIAMPGLTDPHFAKTVTLVCQHNADGALGIIINRPSEL
KLSDIMRQMEIDLKVAELGDLPVFFGGPVHPERGFILHEPATVWASTLVV
SERLALTTSRDILEAVGRGEGPRRMLLALGYAGWGQGQLEREIIDNSWLN
APSDNAVIFEHPPGRRWKAAADLVGVDISLLTSQAGHG
>MCA2997 aminotransferase, class I
MSQSGAAGAFAPALQATMLYSRKLANADGPTASALGRALGEPASNFFKTI
QPNRLEQPHRIFMTPRLSRRTERLTSSLIRDILQITQRPGVISFAGGLPA
EEMMPELDFGACAADSRQYGPSEGEPVLRDLIARGLSGLGLRCQTEQVLV
TTGSQQGIDLVGKLFIDEGTPVLLESPTYLAALQCFRVYGAEFHGLPLQV
GGIDPDALKAAIVRHRPAFVYLIPSFQNPSGCCYADAARRAVAAVLDETG
TPLVEDDPYRDLVYTSCDRTPVCAYLERAPWVYLGSFSKITAPGLRVGYL
ASSPGLFPWLVRLKQSSDLHTGRTGQAWLARFLSSGDFGKHLAHMNGVYA
GRRDTMQAALERHFSGLAEWSAPAGGLFFWLRLVGNIDTLAALKVALGRD
VAFMPGEPFFPVADQRYPALRLNFSHATPEKIERGIGLLSEVLSECAAPA
AG
>MCA2976 DNA binding response regulator
MSTHEEKNESPHLLLVDDDPTYCEVLRQALARRNYTVHAANDVETGLDLA
ARIEPEYAVVDLRIGHESGLTLVKRLHELDSNTRIVVLTGFASIATAVEA
IKLGATHYLTKPADTDEILAALHKDEGDASVEIKEKPLSVKRLEWEHLQK
ILIEHDGNISAAARALGMHRRTLQRKLEKRPVKE
>MCA1821 conserved hypothetical protein
MSEAIIVKVLTGPEIEKYIPDLARLRIEVFRDFPYLYDGTTEYEERYLQT
YVESPESVVVLALDGERAIGASTGLPMEDETPEFKRPFLEHGYDPARIFY
CAESVLLKDYRGRGIYKRFFEGREGHARRLGKFDYCAFCCVQRPDDHPLR
PADYVPLDAIWSRFGYVKHPELVTTYAWKDVDQAEETEKPMVFWLKPLKD
SAR
>MCA1627 transcriptional regulator, Sir2 family
MEFSDELLASLRDARHIAVFTGAGVSAESGIPTFRDALTGFWENYDASTL
ASPEGFAADPALVWGWYEWRRTRVLRAEPNPAHYAIAALAADCPRLTLIT
QNVDDLHERAGSADPIRLHGSLHHPRCSACEAPYRLPPGIPDEPEGGRRV
DPPRCARCGAPVRPGVVWLGENLPQAAWDAARQAAEDCDLMFSIGTSALV
WPAAQLPALVARRGATVVQVNPAETALDGHAGYNLRGAAGKVMPLLLQAL
RRSRP
>MCA0370 transcriptional regulator, AraC family
MSAFHSFPPSPLLAPFVSALWVHDDLMKPELGTCTVLPDTATYICFLCGD
HPIQATHRHRSYTTLSGVSGFQTHRFDLESRGAMSGVTVRLTPWGLSAFL
GDAVGAVAEIRVDCRDLFAPAAVRELEDHLFRLKSPKARAQCVENFLLAR
LRHPRVDELARAACLALARTSGALPIRKLARDLDLGERTLVRRFQNAIGT
TPKKYARVLRLRDAVYLHNKFSSWTEIAYAAGYCDQSHLIRECQDLFGAS
PEALFPIPRGGDTDKSGEPDRSVSSRLVIAR
>MCA2828 cold shock domain family protein
MEDLERRQRSQVKTHEVQAHGRISRLIPAEDFGIIETPEGREIYFHRHSV
VNSDFDRLTVGTAVRFAEEMGEEGPQASSVRVEGKHHLIG
>MCA0447 sigma-54 dependent DNA-binding response regulator
MFEVLIGRSPGFEALIRSARLVAATDVTVLIVGETGTGKELLARALQGHS
LRADRPFVTLNCAALPASVAESELFGHRRGAFTGAVSDFPGRLETADGGT
LFLDEINSLPLPVQAKLLRFLDSGEIQPVGARAPQRVDVRIIAATNANLA
DKIDKGEFRRDLYYRLSVVPLEIPPLRERGGDVELLLHHFMRHFAQTHAI
PPAVFGRGAVRRLIAYPWPGNIRELRNLCERLAILMPGRVIEEQDLPEEA
LRAPPQARPLFTLPDEGFELERMEIDFIRQALQRTQGNRTRAARLLGLTR
DQLNYRIQKYGID
>MCA2256 transcriptional regulator, TetR family
MSTVRFAKRESILLAAKRIFLLHGYAGASMEAIAEAAPVAKATLYSHFEG
KQDLFAAVISLQCEALLNTLAWAHTEVRDPVAALTAIARAFVDLIYSEDA
LTLYRVIIGEQLHFPELGGRVYRSGPEPVLRRLSAYLEDLSVQKVLAIPD
VGVSARLFLGMLKGDEHFRCLLGQKEGLSEAEKISLVGAAVDLFLRGHGY
AESLCAR
>MCA1388 transcriptional regulator, ArsR family
MESKSVVIALAALAQESRLAVFRLLIQAGPEGFSAGRIAEALGIAPSSLS
FHLKELVHAGLVRSRQESRYVIYSANFEVMNELIGFLTENCCRGAPCTTS
PPIRCATDQETPE
>MCA1011 ATP-dependent RNA helicase, DEAD/DEAH box family
MSSDSNSAGPAFADLGLAQPLLRAVSEAGYVHPTPIQAQAIPLLLAGGDL
LAAAQTGTGKTAGFTLPILHRLLEKQAPRRPRRPRCLILAPTRELAAQVL
ESVEGYGKYVPLKATVMFGGVGLNPQVRALAAGVDILVATPGRLLDHCGQ
NTVDLSAVEIFVLDEADRMLDMGFIRDIRRILGLLPKQRQNMLFSATFSD
EIRTLADGLLNNPGYVEVARRNAASDLVDQTVHLVAQEHKRDLLTHLIRR
HDWRQVLVFTRTKHGANRLAEKLAEDGIPAAAIHGNKSQSARTRALADFK
DGTVPVLVATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRAGRA
GSAVSLVAKEELKLLGSIERLIKRPIQRGTVEGFNPPSRPRIERRDDRSR
RPQEVRDGGGRQSPPGQPKARAGLGSRSAARHAQKPQQRQAGNRLRSQGG
KRG
>MCA1598 transcriptional regulator, TetR family
MKSGRPTESVARIASMNASNDTPRHDPTRKRLLQAALEIFADKGFRDATV
REICARAEVNVASVNYHFGSKEALYSEVLGFAYREASERYPYTKAGDKSL
PPEVRLRHFIGNLLGRMLDDTYLGRHGKLLARELADPTPTGALDQVIETT
MKPHCELLDGIVAELVGPGYSEADMHRLGLSVVGQCLMYYHSRSLIDRVY
PEIIATPEDIERTAEHIARFSIAALKHLHLEKPAPDRAG
>MCA0593 protein phosphatase/kinase family protein
MSVSGQPVLRAAVVTLQGRREDNQDFAAIAEPSPRDAAARGFVAAVADGI
GGARGGRVAAEVSVRSFMEAYYGLSETLGMQQLLDRCLGSANRWVHAMGR
LDPELAHMGTTFSGLIFRGRRAYLVHVGDSRIYRLRGDEPELLTSDHTLS
GPGLDHVLYRAVGLDPGLRIDYSVYPLEPHDRFLLCSDGLHGSLQQEQIR
EILQERATPETTAEALARLAFEQGSQDNITALVVDVIALPPAEKQSLRLA
IESLPLLDLPEVGDEVDGFRLERLLSSGRYSALFLAADTLGQDKPVVVKF
PHPRVASEREYYDAFVREAWIGARVKSPWVGEILEQTPGRQSRLYSVMPF
YPGASLEHELARRPRIGLEAGIDLALKLCKAVHALHRQQIVHRDIKPDNV
LLDPEGGLKLLDLGIARLPAWDEDQADPIPGTPSYMAPEMFQGERGSIAT
DVFALGVTLYRTFAGGAYPYGEVEPFSTPRFGSPRPLTAHRPDLPAWLDA
VLARAIAADPAQRPADAVELAYELEAGLEKGGGRRPPRRPLPLYERNPLQ
FWKAVAALLLALLAMAGLRLSLSCRPPSEAASRNNPLIHDNGDSR
>MCA0551 conserved hypothetical protein
MFDTRTHTRRVEELELVNRIRERVDEWRDAGFPGITSVTRRLLEHWHDRE
ARPLPFYFCQLEAIETLIWWVEGPQEFKQGIYLPGDGGPWERVCNKMATG
TGKTTLMGLIITWQVSNALTYPKRKEFSAAIFVVAPGLTVKERLQVLHPG
HGKNVYDEFRLCPNEAMRQKINQAALRVENWHTLMPLKEPDRSVVKKGAE
SDEAFTRRVLGKLAGYRDIVVINDEAHHAYRQRAELKVSKKEAEELGIDL
DEATRWIEGLDRIHRTRRIRRCFDLSATPFAPTGKKSTEKGLFDWIVSDF
GLNDAIEAGLVKTPRVVVRDDALANAQSYKSKLYHLYDEAEVKEDLNRKA
GPHEPLPDLVQKAYALLAHDWRETARRWREAGHDTPPVLLTVCNRTETAA
RIERFFNGGDCPIGETREPDRTLRVDSKVLEKAERGESVTRDKDYAERLE
AIIRAAGLPDDERDDLLGAKQEEQLRALVDTVGKRGKPGQRLQNVISVAM
LSEGWDAANVTHIMGLRAFTSQLLCEQVIGRGLRRVAYERDEDGLFLPEY
VNVFGVPLSIFQDVGEGGEPPPPPKPSIQVEVVPGRQPLEIRWPNVLRVD
TVLRPTLVMDWEAVTPLTLDPMQTPIHAEIAPALAGQADLSKVSEIDLEK
AAAEFRLQNLVFRAARKLYLQSADVFAADKQYLAVQLIRLVEQFLAGDRL
HIPSLWHRDPLRRRLLLAMNMDTVVGHVSRFVQVQNTEKLAACFDQENPI
GSTAFMRTWYTTRPCAPIRKSQISHVAYDSVWEKAVADLCETEPAVLAWA
KNDHLDFKVRYLYRGSSRNFVPDYLIRLSNGKTLVLEVKGRDSERNRAKR
AAMEIWVKAVNEQGGFGRWCFSVVFEPARMRDTLLLHAG
>MCA0777 DNA binding response regulator, LuxR family
MKSKITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTR
PDVIVMDLSLPGIGGLASIRRIRSRDTSARILVFSIHDELIYVVRALEAG
ARGYITKSCAPEILVEAVARIASGESFLEPEIAQRLAMQTLGGAEATTAL
NTLSAREFDVFLLLAKGYTTREVAEELRLGYKTVANYSTLIKSKLGVNTT
AEMARLAYQNGIFKT
>MCA2158 transcriptional regulator, AraC family
MSATSSDRYRARFRKVLEYVDANLDGDLTLDRLCGVAACSKYHFHRQFAA
LFGIGVYQYVQLRRLKRAGYHLAFRSHRPIIDIALGSGYERPESFARAFK
KSIGQSPSEFRRQPRWVPWHATYQPLNQLRSLHMPSAKPAEQIRIIDVDD
TRVAVLEHRGDPRLIGDSIRSFIAWRRQNGLPPRISATFNVLYDDPAVVA
PADFRLDLCAATGREVAENEFGVVEKTIPGGRCAVLRHVGSDDALPETVW
YLYSEWLPQSGEALRDFPVYLQRTEFFPDVAESEAVTDVFLPLR
>MCA0401 putative transcription elongation factor
MSRAFVKETDGEDLDDGAPDRPVSPHPNYVTPAGLAQLQARVAELTAERQ
RLLGDESVGAKQQLRRVERELRYYDERVVSAIPVDPAARSGDRVHFGATV
EVEDEAGNVQRYSIVGEDEADAAHGKISWVSPLARALLNAEAGDTVTWKR
PAGDKELHILAIHPYR
>MCA2706 transcriptional regulator, AraC family
MGNSSEQLQDKVPIARFDLGSLPAEDRYSIWKESISVIFDVEREVETGSA
PFAATLTTCHLGSMLLADTASVGQCFQRKSPLIARDGLDHCIIQVYQYGT
TRGRWGERHSTVQPGDVFLLDLTQPLDSCASDFRNLTLMLPRDLLAPHLG
APERLHGRSLPRDSARGRLLSQHIATLWEVATTLSSDEAQCIARGLVHLI
GAYFGAGRVEEDRPETGAVLLETVRRHIGNHLGDPRLTPESLAAYFRVSR
SYLYSLFQPLGGITRYIQQQRLRRAFLELTRPASRPRRVSEIAYRVGYRN
EAHFSRSFRRAFGMSPSEARFIGLQAVRYTAKGHDQPIDRSYERWVRELN
APDF
>MCA1991 putative ATP-dependent helicase
MSGVDDVFAEDGPLARFLAGFRPRDAQIGMARAVEQAIRGGRCLIAEAGT
GTGKTFAYLVPALLSGKRVLVSTGTRNLQDQLFQKDLPLLRQALGTPVHT
ALLKGRSNYLCPYRLENVVDFGFRAGFSAEEADQLERIRRWAKTTRSGDV
AEVNDVPEASPLWRSVTSTAENCLGQECPLYEGCPVVQARKAAQEAQITV
INHHLLWADWAVKTDGFGELLPVADVIIVDEAHQFAETATQFLGVSLSSR
QLAELADDTLIERAKDAPDMGGLADAATLLKVELTAMRAALGEEPRRDAW
HAVAGKEEVNAGLGRMEEALLALAAQLKIAAVRGKGLESCWKRCDEFIQR
LEAFLAEDTEESVRWFEIHRRGFSLSRTPLDIAGEFTRFRKARQATWIFT
SATLSVAGRFEHFSRQLGIVDAECRRWESPFDYRRQSLLYLPPPGLPDPG
AGNYTRAVLRAAWPVLKASRGRAFLLFTSHQALTEAASILEGKTEFPLFV
QGSRPKTRLLDDFRASGNGLLLGTASFWEGVDVRGEALSCVVIDKLPFAS
PGDPVVSARLEAIRKRGHSPFGVFQLPAAVIALKQGAGRLIRDVDDRGVL
VLADPRLVSRSYGRVFLDSLPPMRIARDPGAVRAFFADPPAEGSV
>MCA2157 putative ribonuclease BN
MKSAERLFPAVRPRIADTCTVLKLLVLVLVREYREGGIRHRAMSLVYTSL
LSLAPLLAVSFSVLKAFGVHNEIQPLLLEMLAPLGEKAREVTDNVIGFVG
NIQVGVLGFVGFLMLFYTVVSLLEQIEDSFNHIWRVSRTRPLYRQFSDYL
SIVLIGPVLLFSAIGIAASMSSMEIVRRLIALEPFGTAYYLAGIVLPYVL
IVAAFAFAYSFIPNTAVKWRPALAGGLFAGLSWKATGFLFAEFTVNSAHY
SAIYSGFAVILLSMIWLYLSWLILLLGSVVSFHVQFPRYLGYGGRRPHLS
PQSQERLALLLMILIGRSHARGEAAACTLPGLADQVNLPWEAVADPLECL
KRHGLLLSLNGERKAYVLARDTDAILLSEVVEAVRTAGDQPVLTLQDEPD
AVREILAAIDRSPETTLGNRSLRDVVRMSG
>MCA0260 putative toluene-tolerance protein
MEIDEVRTLIEAGIPGCEVRVEGEGCNFSVVVIGEAFEGLSPVKRQQRVL
ATVSEPLSTGALHAISMKVYTPAEWSRQAGSA
>MCA2456 transcriptional regulator, LysR family
MDKLTSMVVFTKVAKAGSFAAAAKELGLSRAMATKHVMQLENSLGVRLLN
RTTRHLSLTEVGMVYLERCLQILDDLEETELAVTRLQTEPRGTLKLNAAP
FFGAYHLAPAIAAYLEIYPDVNVELVLQAGYVDLVEEGFDLAIHLDELRD
SSLIARKLGTSQRIVCGAPSYFEKRGVPKTPEDLKKHNCLSNSSLPPRDQ
WQFVSQDGKSTVIKVSGTLEASSADALRMAAISGLGLVLLPTYMVGQDIR
KGRLQAVLTDYVPAAADIHAVYPHRKHLSAKVRTFVDFLHERFHPTPYWE
EWMHPESGEMGGQ
>MCA3006 transcriptional regulator, AbrB family
MTAVAKITAKGQTTIPADIRAALHVGPGDLIAWEIEPDGSARVRRVQPLD
IEYLKAVEGTLSEWTSPADEEAYRDL
>MCA2962 transcriptional regulator, AraC family
MGSLLVFSSHQLPERDRFDLWRETASVGPGAVDVAHVDRRPFFGRVEWLP
LGKIDAYRVSFSAATFTRSRRWIEWDGFDGFCFHINLNGRSETSRRRSRT
VLDGFSATGHSYGQPFEAALVPAPGRYCESLNLVIPREEMLHKAPHAERC
IGTLHADQPPLRLLSQYLIMLGNTPAEDSQLNQLAGNHVLDLLALLLGPT
LDAEHEAKLHGLRTARLAALKRYLHDHHHHPKLSVTMAARALNISERYLH
DLIAETGESFTEMVNRLRLERARRLLCDPKHRHLRIGEVAFTSGFNDLSY
FNRLFRRRFGETPGTFKAEAHRDRDAFHSPDAMEIGHD
>MCA2869 putative S-layer protein
MRIELVGWDIGGAHLKAVALTDTGAIADVRQYPCPLWLGLERLESALSEA
VNELGIDSSCRHAVTMTGELTDHFEDRMTGVQTLTATMLRRFGPEGILVF
AGRVGFLRADAVQPRHALDVASANWLASASLIAHRLREPALFVDIGSTTT
DLVVLGGGEVRARGYTDYDRLRYDELIYTGVVRTSAMALADELPFEGEWV
NLMAEHFATTADIYRLTGELAEHTDQMPAADDGEKSIAGSERRLARLVGR
DREDGTAEQWRQLALCLRERQLARITRAIERQFSRNTLPAESPLVGAGAG
RFLARVLAARSGRPYVDAIDLLPRPTVTTALPVSDCLPAAAVALLARPFL
EKA
>MCA0228 response regulator
MQIGVDTERAVDDRRVFVVDDDEITRAALQFMLHDEIETHELGSLEAAYA
KALDWKPAVLLLGLGVVRSRGIDVLAEIRARLEDIRIIVVADAATDPLAQ
ECLKQGANSLLTKPLTIEKARQKVDMQLGRKVRLAVPVVVT
>MCA2506 Rrf2 family protein
MQLTQFTDFSLRVLIYLVRLPEPGMATIPEIAEYYRISRNHLVKVVNTLA
NAGLLVTMRGKGGGLRLARPADTITIAEVVRLTEPNMNLVECFDPKASHC
RIDRGCFLKAILYEARKDFLAALERHTLADAARMGSGSEGESPAPRGARM
>MCA0726 transcriptional regulator, TetR family
MTRERILMAAKDYLEKNDIERLTLRRVAELSGVSPPTVYAHFPTMDDLIA
AFFQWLKPRLGLDQPLPSLKELATLPDRLFPRYEEYGPLLRNLMNKPSWD
RQRLADRDRRHGGWLDAISAEFPDHTPEQLRRGGLVVAAFWTPTLWRWLR
DTCGFTPEETRLVAGWAIRVLIDALKKDPSSLDGSPSNTLPSPDPDDEFK
P
>MCA0661 ROK family protein
MTSHGRELLRRRTDTPQGNYPETIRTIVRLVEEAEYELAERGTVGIGTPG
AVSAATGRLKNSNSVCLNGMPLREDLARALGRPVRLANDADCFALSEAVD
GAAARAESVFGVILGTGVGGGIVIRGRLLNGANAIAGEWGHNPLPWPQGI
ERPGPPCYCGKSGCIETFLSGPGLARDHERRTGESLDAKSIAERAELGHA
SCRGSMALYEDRLARALAHVINIVDPHVIVLGGGLSNCARLYANVPRLWG
RYVFSDRVDTRLVPPRYGDSSGVRGAAWLWKR
>MCA0413 conserved hypothetical protein
MRPPEIPEGHADTSGQFLVAHPKMPANIFAHSVIYVVSHNADGAMGLIVN
RLAGAGPLGKLLEAFGLASKAQREIKLYLGGPVGIGQGFVLHSDDYAGAS
TRALKKGLSLSTGLDVLEAIARGRGPRQVRMLFGYAGWSPGQLDGEIARG
DWLLAPADTSLIFSEEPDKVWEEALKHAGLPL
>MCA0316 transcriptional regulator, TetR family
MEQGYHGTGLQDILHSVGVPKGSFYNYFTSKEEFGAEVIRHYIEPFILQL
DGHLRNSALNGAQALQAYFHTLIGEAARRQFKGGCLLGNLMGEIGDTSDT
CREALREALHRYRDKLAQGIARAQSEGAFRRDRTAEDLADCLVDAWQGAL
LRMKVEQSVRPLEECCRNLLEGYFRA
>MCA1260 transcriptional regulator, LuxR family
MASKQQQIHDLWDGLAEFGPTRVNEALDHAMASLCGIIGAQQACWFGAVR
LDCRDDPIDGWRVCAIRYLHPHPERDAAYAEHRRRLERGDIDPSIVANLR
HAGRFRVSIQHEIVPPGWYDGEFYRSLFKPFGIRDVCYMATPVNSGLESW
FGFERVSPEAPLFGEAERALLERAGRALKWFHRQLALHHGLMIASQPLTP
AERRLLSALLGGASEAEIAERLGLTPNTVHTYATRIYRKFGVKGRTGLVA
LWLGC
>MCA1807 transcriptional regulator, TetR family
MNPPNTHPFPDPTRKRLLQAALDVFAEKGFHDATVRDICARADVNAASVN
YYFRSKEALYSEVLAAAFRETHERYPDTLACDSSLPPEVRLRQFIANFLA
RLLDETHLGRHGKLIAREIADPTAALDQVIESTMKPRCALLQGIIAELVG
PGVSEADMHRLGLSIVGQCLMYRHSRSLIDRLCPEIIATPEEIEKTAEHI
ARFSMAALRHLSAGEAGP
>MCA1780 putative transcriptional activator, Baf family
MKLLIDIGNSRVKWARSEPGRYTFGGAFATDASSLAEACESQMAALPRPE
AVLVSNVAGMRAGRLLADWASARWVVPVRFVRSEASALGVVNAYPNPAQL
GVDRWLGLIGAWRTRRDACCIVSAGTALTIDLLDAEGRHRGGVIGPGLAM
MRAALASLEALGGAAESCDGFFCNRTGPALSSGILHSAVGLIRESQARAA
RLLATEPELLLTGGDAETLRPYLETPVRLVPHLVLEGLHAVAERMP
>MCA2269 transcriptional regulator, LysR family
MIRIDLDGLRLLDAIARRGSFAAAAEEMHRVPSAVTYGIQKLEQDLGVIL
FDRSGHRATLTEAGRELLQEGRHLLRAAAEVEERVRQVARGFETELRIAL
SDLIPLDRFYPLLEAFYVLNCATRIKLSREVYGGTWDALATSRADLVIGA
PGEAPPGGGLATRPLGVVEFVFAIAPGHPLAGLAEPLQRADIQHHRAVVA
SDSSRNLPPRTSGLLSGQDTLAVPDTEAKLEAHRRGLGVGYLPRQLVLQD
LARGTLICKEVEEPKPQVPLFLAWRSGHRGKALDWFIQRVEQTAAAGLLV
>MCA3027 transcriptional regulator, AraC family
MITELTFDSDAIAECDRFEVWREMFCSKMWGLDIAHSDSRPFFARCRFVS
LGAVEVIRSELNGLDFSRTPRRVRQQESDDFGFHLSLSGGVRAVQAGCHA
EVRGAGGLLLAGGQPYTLSTPQMPGSAHYQCYSLHLPRKELLQRVPDAER
HLAEVCAGGEPLNLLVQYLDLVAGHDAALRSPDLRRLAGEHLLDLVALTL
EPGRDPESQFQRGGLRAARRAALVRYLEQHYRDERLSVKTAAAALGISES
YLHRLMAESGESFTEMVNRLRLERAKRMLEDPGCDGLRIGDIAFATGFND
FTYFNRLFRRRFGDTPRTFRADRPEQGDTMQ
>MCA2279 cpxR, DNA-binding response regulator
MTRLLLIDDDTALCELLSEYLALEGYAVEAVHDGEAGLAAALSGRYRLAL
LDVTLPRLNGFEVLKRIRQESSLPVLMLTARGDDFDRVVGLEIGADDYLP
KPFNHRELVARIKAILRRTDPDSRPASGARILEIDDLSINPANREVRRGG
VPVELTAAEFLLLKTLAEAPGTLVGRDELTRIVLHRRLTPFDRAIDMHVS
NLRRKLGEKPDGSPRIRTVRGSGYFYIGTPSGRGDGSA
>MCA2469 cysB, cys regulon transcriptional activator
MKLQQLRYIWEVSQHDLNVSSTADALFTSQPGISKQIKLLEEELGISIFA
RSGKHLTEITPAGKYVVELAGQILSKVQDIRSVAQEFRDNRVGSLSIATT
HTQARYALPPVVREFMQRYPGIKLNMHQGTPVQIAEEASRGLVDIAIATE
AIELFGNLVMLPCYRWNRIALVPKGHPLTEKPGLTLEDLGEHPLVTYVFG
FTGRSHLDQAFNRAGIKPRLALTAVDADVIKTYVRLGLGVGIIARMAYNP
ETDADLVALDASHLFESSVTNIGLRRDIFVRGFLYDFIELFAPHLTREVV
DRALSTREPKELEALFAGLTLPVR
>MCA1746 fis, DNA-binding protein Fis
MRQDNRLLESFESPPKDPSPAPVVLSEQVRAALVNYLSQLDGISVTDMYT
LVMGEVERPLIRTVLEHCCHNQTRAAQLLGLSRSTLRKKMQQHGIE
>MCA1851 greA, transcription elongation factor GreA
MNKTPMTTRGAEKLREELNHLKTVARPRVIEAIAEARAHGDLKENAEYQA
AREQQGFIEGRIKEIEAKLANAQIIDVTRLNPGGKVVFGATAEIEDLASG
EVVTYQIVGEDEAEIKEGRISVTSPIARALIGKQEGDVATVQAPGGTREY
EIVSVRYV
>MCA2531 hepA, RNA polymerase-associated protein HepA
MAGPLHTLRSGQRWISDTEPELGLGTVVGVEHDRVTVSFIASGERRIYAV
GNAPLSRVRFAAGDRVESVDGWSMQVEEVEEQDGLLVYLGKDADGKPRTL
EEIELNPFLQFNRPQDRLLSGQIDPGDVFRLRIETGEKLARLEQSPVLGL
VGPRTALIPHQLYIAHEVASRHAPRVLLADEVGLGKTIEAGLIIHHRVLT
GRTEKVLILVPNMLLHQWLVEMLRRFNLRFSLIGEDAYEDAAEEGSPFKD
VNLALSSLDFILKDPERRRYVLDVAWDMVVIDEAHHLEWTPEKPSPAYAF
VEMLARRTPGLLLLTATPEQLGKLGHFARLRLLDPDRFFDFEQFRQEEQE
YTALAGVIDKLLDSPRLDADTLGQLQHFLRHDRADALVGDLNDPEHAAAA
RNALIQLLLDRHGTGRVLFRNTRNTVHGFPSRLLHGRPLPLPEHYRTQKA
SLEARLWPESARPDPDWWRHDPRVHWLLDIAQRLKPSRSKLLVICHRQQT
AVDLENALRTLGGVRAAVFHEGMSIIARDRAAAWFAEEEEGAQVLVCSEI
GSEGRNFQFAHHLVLFDLPLDPNLLEQRIGRLDRIGQHHSIDIHVPYFED
SAQEILFRWYHEGLDAFHRPAAAGAAVFARLGDELRRVLLAPDTHAGITL
IQDTRTLAETIEAKLHAGRDRLLELNSCRPEPANRLVEAVAAWDRDTALW
PWLEAVCDAYGVVVEEHSTDCYILRPGEHLRVPKFPELPEDGVTVTLSRD
VALAREDMVFLSWEHPLVRGAIDLVLNGEHGNASLGFVSHPALASGQMLL
ETFHRIECPAPRRLQLFRFLPTTQLRTLLDHRGQDLGRIAMAEFDERPQT
FEPANVRAFVRSQKPNLEKLLALAETRAGTRLTEIVADSSRRMLDEMTNE
LKRLAALRSVNPSVRQEELDRLKDDAVEMHGYLQAARLRLDAVRLLITV
>MCA1858 hrcA, heat-inducible transcription repressor HrcA
MASFPELSERAQQLLKALVERYIGEGQPVGSRVLARDAGLSPATIRNVMA
DLEELGLITSPHTSAGRLPTVSGYRLFVDSLLTVKPLHQAIVDQLWLDLE
SRENPRDLLETASKLLSELTHMACIISMPRRETLVFQHIEFLPLSDNRVL
AILVTSDQEIHNKIIHTPHKFSAAELQTAANFFNAVCGGKDMVSAREHLR
AELAKERDRLSEQLLQAGEIAEQALAEGGRSRKPFLVRGETNLMDFVELA
DVDRLRGLFEAFRQKESIVGLLDRCLESPGVKIIIGEESGFRPLEPCSLV
TASYSVDNRVMGVLGVIGPTRMKYERVIPLVDVTAKLVGAALNQRTLAPT
>MCA1602 hypB, hydrogenase accessory protein HypB
MCDTCGCNITDGNRHLLRADGSHAKVTAVSVLNKLLRHNDAQAEANRALF
DRHGVLVINLMSSPGSGKTSLLEATIKALNGGLRIAVIEGDLETENDAAR
IRALGVEAHQITTGTACHLDAHLVANVLPRLDLENIDVLFIENVGNLVCP
ASFDLGHHLNLTLLSVTEGDDKPAKYPVMFRAADAMVISKTDLLAVLDEF
SPDKAEACLRRLASNAPVLRVSSKTGEGMREWLDWLNQRLEHYRNLRREN
RSLSPAVQSEGRRLHGLARPDVRFKPAPKPQTA
>MCA2213 kdpE, DNA binding response regulator KdpE
MPGPNPVVLVIEDDPPMRRFLRTSLRSQGFQVYEADTGNRGIIEAGLRRP
EVVVLDLGLPDRDGVEVVKALREWTLLPIIVLSARSTEEHKIEALDAGAD
DYLTKPFGIGELLARIRVALRRSAGVTVNVPDEGGAGGGLRIDLLRRTVA
VGEREIRLPPTEYRLLAALARHAGKVLTHRQLLLEVWGPSHVEDCHYLRI
YMSQLRQKLETDPAKPEYLITESGVGYRLKV
>MCA2167 lexA, LexA repressor
MKPLTVRQREILDCIRRSVENEGFPPTIAEIARAIGVSSPHGVREQLRAL
ERKGVIELIPSASRGIRLLARAEEPGLPLIGKVAAGRPLLTEAQVERYCQ
LGPELFEHKGDYLLRVQGMSMRDAGIIDGDLLVVQQAQEARSGQIVVVRL
HDEVTVKRLRLEGALAYLEPANPEFSVIAVDPERQPLCIEGIVVGVIRTR
VG
>MCA2261 metR, transcriptional regulator MetR
MKPSLLELRHLQTLLALVETGTLSKAAARVFLTQSALSHQIKQLEDHYGV
ALFERKTQPLRLSPAGQRLHGLAETVMKAVREAERDIARIAQGNSGQLRI
AVECHTCFDWLMPAMDQFREHWPEIELDLVSGFHADPLALLREDRAELVV
VSEPQAHEGIAFHPLFRFEIVGLVSRRHPLAPRDFLAPEDFAEETLLSYP
VPEDMLDIVRKVLKPRGIEPRRRTAELTVAILQLVASRRGIAALPQWTVQ
SYLDREYVLAKPIGETGLWSALYAATTERMAQSVYMGDFLDIVRSSSFRN
LRGLLPLTKEDSP
>MCA1864 mfd, transcription-repair coupling factor
MATPLTPPLPTTRRQALCWSGLHGCSDSLAIASAIGASPGLFVVVTADAQ
SALRIEQEVKTFLGGDAALLPFPDWEILPYDVFSPLPEITSQRLRTFYEL
SRIQHGLLITPVSTLMHRVAPRTHTLANTFSIRTGSAVNIDQTRQTLESV
GYQCVSQVYQHGEFAIRGSILDLYPMGSETPYRIELFDDEVETIRTFDPE
SQRSIEKVEDIELFPAREFPFDEAAIKKFRQNFRVEFPDAVSRSVLYQDV
SKGIAVGGIEYYIPLFVERMDTLFDYLPGDATLILHGDVEQAAAAYYAEA
ASRHDQRRHNLDRPPLPPARLFLEPEALTSSLASFSRVMIPAADAAPAAA
VKFDCAPPPALHPETKTQPPYEPLQCFIGEFAGKILLVAESAGHRETLAA
NLTKYRIRPRIVESWADFLAVPDPLCLMVAALDHGLVISDPPLAIVTEAQ
LSGDKAQQRRRRQRTPSKDFGQFLRSLEELEIGAPVVHREHGVGRYLGLQ
RIDTGGVESEFLTIRYANDDKLYVPVSALGMVSRYAGADPEHAPLHRLGS
EQWAKARRKALEQVRDVAAELLDIHARRAAASGRSFATLTEEYLSFAAQF
PFEETPDQETAIQDVIRDLAAPRPMDRVVCGDVGFGKTEVAMRAAFIAAQ
NGRQVAVLVPTTLLAQQHYKNFCDRFADWPMRIDVLSRFVSKKDQAQTIA
DIGDGKVDIVIGTHRLLQKDIRFKDLGLVIIDEEHRFGVAHKEHFKKLRS
EVDFLALTATPIPRTLDMALSGLREISVIATPPPHRHVIRTFVTEWDDTL
VQEAITREIKRGGQVYFVHNKIETQPRLAERLEKLVPGIRTRIAHGQMPE
RELENIMLDFYHQRFNVLLCTTIVESGIDVPSANTILIDRADTFGLAQLH
QLRGRVGRSHHRAYAYLLVPPKKAMTADAVKRLEAIEAAGELGAGFLLSS
QDLEIRGAGELLGEEQSGQIQEIGFTLYTELLEKAVNALKSGKQPELETD
HLAGTEVDLQCAALIPEEYLPDVHTRLVLYKRIANARSDDELRELQIEMI
DRFGLLPEATKQLFAVSALKNEAAKLGIAKIEAGATGGRLIFEAHPAIDP
AAIILLIQKEAATYKLDGPDKLRFIAKLPTPAERVRFVEALLDRLKA
>MCA0764 nifA, transcriptional regulator NifA
MVDRYTLIERELDALYQVGQVLNSTADLKGRLEGVLNVLHEQADLRSGMI
ALREPETDALVLAVLRRGEAGRTSNEPVRYEPGEGLIGTILEANCTIVVE
RIADEPRFLGRLGLYDPELPFIGSPIHVGKDELLGVLAAQPSERELLGER
ARFLEMVSNLVAQSVGLLRGMEQKQRDLTTQCEQLQQTLRSNYGFENIIG
RTPPMLRVFETVRQVAKWNTTVLIRGESGTGKEMIASAIHFNSPRASGPF
VKLNCAALPENLLESELFGHEKGAFSGAVNQRKGRFELANHGTLFLDEIG
EISPAFQAKLLRVLQEGEFERVGGIHTLKVDVRIIAATNRDLESAVEEGA
FREDLYYRLNVMPIQMPPLRQRKEDIPELARFLLGRISRNQGGRLLEIKE
SAIRSLMRHDWPGNVRELENLLERAAIMSREGVIDSEVIGMTGLKEKLTT
VADVASYKVDLGDENLDERERIIAALEQSGWVQAKAARLLDMTPRQIAYR
VKILNIHMKHL
>MCA1316 nusA, N utilization substance protein A
MANKEILLVVDVVSNEKDIEKEVIFSAIEEALRTATIKRHDGRYDVRVSI
DRKTGDYETFRRWQVVEPREEFGNGVEFPEREISLEEARKTHPGITVGEF
VEEPFDSIEFGRIAAQTAKQVIVQKVREAERRKIADAYQSRVGELVTGVI
KRIERGNVFLDLGGNVEAFIPRDEMIPRESVRSGDRLRGILSAVRPDARG
PQLFVSRTAPELLIALFRLEVPEVSENLIEIKGAARDPGVRAKVAVKSND
PRLDPVGACVGMRGSRVQAVSNELAGERIDIILWNENEAQFVVNAMSPAE
IVSIVVDEDRHSMDIAVADENLSQAIGRGGQNVRLASELTGWTLNVMSST
QADAKTQEETRRLIQTFVEQLGVDGEVAEILVREGFSSVEELAYVPTKEL
LEIEEFDEDIVEELRNRARDALLIKAIASEEKLEEVEPSEDLLELEGMDR
ELAYRLARHGIRTLEDLADQAVPDLLDIEDMEEEKAAELIMKARASWFS
>MCA1654 nusB, N utilization substance protein B
MSLARTLARRAAVQAVYQWQLARDSLPDIERQFVEELQLAKSLYRRHAEG
FELSPPEREQLEELLEKFGRSQGTDEVEEEDVTLEQRASQCQVPDVQVGY
FKELLHGVANNLALLDAALAKYLDRPIDEVDPVERAILRIGCYEFMRRPE
TPYRVILNEAINLAKEFGAAQSYRYVNGILDRVAHECRAVEMAARRRG
>MCA1061 nusG, transcription antitermination protein NusG
MALRWYVIQAYSNFENRVKRSLEERIARAGLEHYFGKILVPTEEVLEMRQ
GQQRKGERKFFPGYVLVQMELNDDTWHLVRDVPRVLGFVGGTPDHPAPIS
DAEAEAILARVEEGVKKPKHKVLYEVGEVVRVIDGPFKDFNGVVEEVNYE
KSKLRVSVLIFGRSTPVELEFGQVEKG
>MCA3105 phoB, DNA-binding response regulator PhoB
MSDINVLVVEDEEAIREMLTLVLEQADFAVQTAGDVQQALNRMDEQEPDL
ILLDWMLPGVSGVEWARRLKKDENYGDIPLILVTARGEEEDKIRGLDVGA
DDYVTKPFSPRELIARIRAVLRRSNRQSKLDGRIEIGGILLDTDEHRLSI
DDESVNLSPTEYRLMEFFLTHPSKVYSRAQLLDQVWGRSAYIEERTVDVH
IRRLRKILSEHDREDMIQTVRGFGYRFSTRPD
>MCA1954 ppk, polyphosphate kinase
METVEGNRTEKEGGRLVISKVKGISKSTRIMLAEHGIFSVEELADADVGR
LTKIPGLSRQKALRMVRAAKFMVGDMEKGRDEVSAGTGSAETAEISSADV
GLDDSRCFLNRELSLLEFNRRVLDQAKDVRTPLLERLNFLSIACSNMDEF
FEIRVAGLLQKSELGAAQTEPDGMTPQEVLAAISERAHELVAEQYHVLNQ
ELLPALEAEGIRFIRRSDWTDAQHKWLRRYFEEELAPILSPIGLDPTHPF
PRPLNKALNFIISLAGKDAFGRNIHLAILQAPRALPRIIQLPKSVTSGRL
HDFVFLSSVIHAFVDDLFHGMKVKGCYQFRVTRNSDLFLDEEEIDDLLQA
VEGELASRNYGDEVRLEVADNCPDAVIEFLLSQFGLGEDRLYRVDGPVNL
SRAREIYDLVDRPDLKYPPFTPGWPAQLTGHQDFFEILRRQDILLHHPYE
SFIPVIDLIRQAADDPQVVAIKQTLYRTGPDSPIVDALARAARAGKEVTV
VVELLARFDERANISLATRLQDAGVQVVYGIVGYKTHAKILLILRREGRS
LRYYTHLGTGNYHPRTARMYTDYGLMTSDKALGEDVQRVFVQLTSLGKMG
KLHKLLQSPFTLHKTLIRKIEREIEHAKEGKPARIVIKINSLVEPKLIRA
LYRASCAGVQVRLIVRGICCLRPGIPGVSENIEVRSIVGRFLEHSRVYCF
ENGGEPEVYAASADFMARNMFRRVETCFPIENKKLAERVRNDLELYLRDD
CQTWQLRSDGSYERLPDVHHCDAQAELLEALKKTV
>MCA2025 recG, ATP-dependent DNA helicase RecG
MATSRRPDGVSLDNLQGAGTKTLSRLNKLGIFKLQDLLLHLPIRYEDRTR
LTPLGALQPGQPALVEGGVAFTDVAGTSRRSLICRISDGTGFLDLRFFHF
RPEQLRALSSLRRIRCFGEVRVGVHGLEMIHPQYEALPETAPAPLETGLT
PVYPTTDGLSQQSLRRFVAQALRLAEPEHEKSFRLPPRLAPELDALSWWD
AVRTLHRPMDDCPKALERARRRLAYEELLAHHLSLARFRQEIRRRSAPVL
NTDEAIKTTFQSGLPFSLTGAQRRVIGEIESDLRSGRPMLRLLQGDVGSG
KTIVAAHAALAAASSGWQTALMAPTELLAEQHFHTFSGWLESSGVTTTLL
TGKIKGQGRREALAAIASGATALVIGTHALFQDAVEFHRLGLTIIDEQHR
FGVHQRLALRDKAHPLAALPHQLVMTATPIPRTLAILGYADLDCSVLDEL
PPGRTPVVTRLIPSTRRGEIIDRIANWIARGRQAYWVCTLIDESEALQCE
AAANTAASLAQTLPGLRIRLLHGRMSAAEKDGVMREFKAGESDILVATTV
IEVGVDVPNAGLMIIENPERLGLAQLHQLRGRVGRGPGDAYCILLYQPPL
SAIGRERLKILKDSSDGFAIAERDLRLRGPGEFLGVRQTGLARFRIADLT
RDADLIETVSASAERVLEHHPELVAPLIDRWVGRGVHYAGA
>MCA1920 relA, GTP pyrophosphokinase
MKHTHYQSDASKLDAEQLHRLFEQGYPAQAENIRKALNLAIDAAAKDPET
RPRGVDVGHILLNLKVDAYSIQAALLADPYLRETLPQEFIRDHFEEETVR
LLEKVNWLNTFNEYSLQDNPGPEQAELLRRMLLSVVNDVRAVLVRLAYRV
QRMRILKYQDSDVRESIARETLELYAPLAHRLGVGQLKWELEDLSFRYLH
PDEYRTLAKSLNTNRAEREVYILNFMGLLRDELKKLGIDARVSGRPKHLY
SIWKKMERKHAQLADLYDLLAVRVTVDSIPTCYTVLGAVHGLWPHIPKEF
DDYIANPKDNGYQSLHTVVIGPDDRPVEIQIRTQAMHEFAEYGVAAHWRY
KEGGGQDAAFDRSIASLRRLLESEEDNDSLLQDFREEPFGDAIFVLTPRA
QVIRLAKGSTPVDFAYAIHSEVGHRCRGAKVNGAMVPLTHPLKSGDKVEI
LTAKEGGPTLGWLDPRLGYVRTAHARNKIRQWFKQQDHDKHLRAGKAILD
KEKHKLQTRDVDLDALARHFHLPRPDDVLLAIGRGDIGPGQLAAALQVPG
FQPPPVPPRKPARAAVRGTGEVTVQGVRNLLTHFARCCAPIPGDPIIGYI
GVGRGVTIHRQDCPNVVQLPSGKRNRLIDVAWGEETRVFPVEIEVRAFDR
KGLLKDITQVLAHEHINILRTYTETNLQDQGVVMDITVEVHDLGQLSTAL
EKIGQIHNVQEARRKLPG
>MCA0056 rho, transcription termination factor Rho
MNLTDLKRKPVSELIEIAESLDIEGVARTRKQDLIFSILKKLAKSGEDIY
GDGVLEILQDGFGFLRSPDSSFLAGPDDIYVSPSQIRRFSLRTGDTISGK
IRPPKDSERYFAMLKVEQINYEPPENAKHKILFSNLTPLFPVQRFVLELG
NGTTEDLTARVIDLVAPIGKGQRGLIVSPPKAGKTMMLQNVAHSIAEKNP
ECYLIVLLIDERPEEVTEMQRSVKGEVVSSTFDEPPARHVQVAEMVIEKA
KRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALERPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDEVIYEEFKGTGNMELHLERKIA
ERRIYPAININRSGTRREEYLVDPDELQKSWILRKILQPMDEMAANEFLL
GKLKDSKTNREFFDMMKR
>MCA1463 rnc, ribonuclease III
MIRSHEHLARKLGIPFRDPGLLRNALTHRSAEGVNNERLEFLGDSVLGFV
VTEYLYQRFPSADEGVLSRLRATLVNETSLARIARELELGEYLILGSGEL
KSGGYRRDSILSDALEAILGAVLRDQGIDACRALILTLFERPLSALSLDD
WKKDPKTRLQELMQGRGLPLPVYTLIDQSGLPHDQHFRVRCEVPLAVEPC
VGEGSSRKKAEQQAAENMLSRLSDQSRFRV
>MCA2347 rpoA, DNA-directed RNA polymerase, alpha subunit
MHNSLAELIKPRTVEVVPHGSHSARVVIEPLERGFGHTLGNALRRVLLSA
IPGAAVTDVVIDGVLHEYSTIEGVQEDVIDVLLNLKNLAIRLNGPHDVYL
NVDKHGPGPVLAGDIEASHDVEVLNPELLIAHINGNGRLRMTLHVQKGRG
YQPVANRAIEGDSAIGTLHLDASFSPIKKVSYVVESARVEQRTDLDRLVI
ELQTNGTVQPEEAVKHAANILNQHLAILVDLKGEDLPLFGEDGPQFDPLL
LHPVDDLELTVRSANCLKAENIFYIGDLIQRSEADLLKTPNLGKKSLTEI
KDVLATKGLSLGMRLENWPPEGLKKLNQ
>MCA1066 rpoB, DNA-directed RNA polymerase, beta subunit
MAYSFTEKKRIRKSFGKRQDVLEVPYLLATQVDSYRRFLQLDKQPAARSD
EGLHAALKSVFPIKSHSGNIVLEYVSYRLGDPVFDVKECQQRGTTYAAPL
RVLVRLVVYDKDAPVGAKVVRDIKEQEIYMGEIPLMTDNGTFVINGTERV
IVSQLHRSPGVFFDHDRGKTHSSGKLLFNARIIPYRGSWLDFEFDHKDCV
YVRIDRRRKLPATVLLRALGYDNEQIIAEFFDTNRFLLSSAGIQLELIPE
RLRGDIASFDIRLGDQIVVEKDHRITARHIRMLQKENVNLLDVPKDYLYG
KILAHNVVDTSTGELIAKVNQEITEDVYARLVAAAIPEIRTLYVNDLDRG
PYISNTMRIDLTETQLDALVEIYRMMRPGEPPTKEAAQTLFENLFFSAER
YDLSAVGRMKFNRRLGRTDPTGPGVLENDDIIAVLKELINIRNGGGTVDD
IDHLGNRRVRSVGEMVENQFRLGLVRVERAVKERLSLPDADGLMPQEIIN
AKPVAASIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLARERAG
FEVRDVHTTHYGRVCPIETPEGPNIGLINSLAVYSRTNEYGFLETPYRKV
IDGRVTDQIEYLSAIEEGQYYIAQASASVDENGMLKDELVSCRHKDEFTL
ASRENINYMDVSSKQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLR
TEKPLVGTGMERIVARDSGVAVVAKRGGTVEFVDASRIVVRVNDEETEAG
VPGVDIYNLTKYTRSNQNTCINQRPLVKPGDVVARNDVLADGPSTDMGEL
ALGQNLLVAFMPWNGYNFEDSILISERVVQDDRFTTIHIEEKTCVARDTK
LGPEEITADIPNVGEAALSKLDESGIVYIGAEVKAGDILVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMDGTVIDVQVFTRDGVKKDER
ARQIEEAEIERVRKDLNDQLRIIEKDFYQRAEQMVLGKVADMGPGGLKRG
ATITREYLDSIKPAQWLEIRLQDEDVNLQIEAIAEQIAQQREEIAKRLEE
KRRKITMGDDLAPGVLKMVKVYLAVKRRIQPGDKMAGRHGNKGVISRIVP
VEDMPYSADGTPVDIVLNPLGVPSRMNVGQVLETHLGWAAKGVGLKIGRM
LEAKAKIEEIRSFLTQVYNVSGRQEDIASLSDAEVLELAGNLQDGVPMAT
PVFDGATEEDIKAMLRLADLPESGQATLFDGRTGDVFDRPVTVGYMYMLK
LNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAA
YTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEAAMPESFNVLIKEIRSLG
INIELEQD
>MCA1067 rpoC, DNA-directed RNA polymerase, beta' subunit
MKDLINFLKRQTQSEEFDAIRISLASPDMIRSWSYGEVKKPETINYRTFK
PERDGLFCAKIFGPVSDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRE
RMGHIELASPVAHIWFLKSLPSRIALLLDMQLREIERVLYFESYVVIDPG
MTPLTRGQLLGEEEYQKLVEQYDDEFTAKMGAEAIRELLRTMDLHAEVVQ
LREEINGTNSETKIKKYTKRLKAIESMLASNNRPEWMILTVLPVLPPDLR
PLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYS
GRSVIVVGPTLRLHQCGLPKKMALELFKPFIFSKLQFRGLATTIKAAKKM
VEREAPEVWDILDEVIREHPVMLNRAPTLHRLGIQAFEPILIEGKAIQLH
PLVCTAFNADFDGDQMAVHVPLSLEAQLEARSLMMATNNILSPANGEPII
NPTQDVVMGLYYMSRERLFAKGEGMTFASVDEAEQAFLNGAVDLHAKVVV
RVREVVVGEGGERTESIKRVQTTVGRALIWNIVPEGIPFEMVNVDMTKKA
ISRLINHAYRTLGIKASVIFADQLMYLGFSHATRAGVSFGVEDMEIPVRK
DEIIQAAEREVKEIQNQFASGLVTDGERYNKVVDIWSHANDQVAKVMMEG
LGVDEVTVGNGETIKQKSFNSIFMMADSGARGSAAQIRQLAGMRGLMAKP
DGSIIETPITANFREGLTVLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVAQDLVITEDDCGTTDGLQMAPLIEGGDVVEPLAERVLGRVLAEHAVD
PASGDVLLEAGSMLDERAVQLLEQHGVDNVRVRSVITCKTRYGVCASCYG
RDLGRGHKVNIGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAISNV
EVKSSGQIRLTNLKTVVNRDNALVAVSRSGEISVIDEHGRERERYKIPYG
AVLSVREGGAVKAGQIVVNWDPHTHPVISEVRGRAKLIDFVEGVTVREQS
DEMTGLSSMVVIDPKQRGGAGKELRPLVKLVDEEGNDIFIPSTEITAQYF
LPAGAIIGIRDGDLVEVGDVLARIPQESSKTRDITGGLPRVADLFEARKT
KDPAILAEATGTVSFGKETKGKRRLIITDASGEQHEVMVPKWRNITVFEG
EHVEQGETIAEGELTPHDILRLRGTAELASYLVKEIQDVYRLQGVKINDK
HIEVIIRQMLRKVEITDPGDSSFLRGEQVDRSRLLEENDRLEEEGKVPAC
YEPVLLGITKASLSTESFISAASFQETTRVLTEAAIRGSTDRLQGLKENV
IVGRLIPAGTGLAYHTERRERAKLGEVTEPETPIIDTAEVEEALKQAFSL
>MCA2994 rpoD, RNA polymerase sigma-70 factor
MTPEQQQHQLKELIAKGKMQGYLTFSEVNDHLPSDIVDPEQMEDIICMIN
DMGIEVHEDVPDNEDLIQDTAVVAESDEDEAAEVAAALASSVDTELGRTT
DPVRMYMREMGTVELLTREGELSIAKRIEEGLNIAANELVRFPAAMEHFL
KAFETVDNGELRLSDLISDFFDPAAADTVATEDDAEAEIIDEGDTGPDPE
LVKEKLAAFRKLHKAAVTAHHKYGYGHEKTQKSFDALATAFMEFKKTPQF
FKELTDTLRDTVAKIREQERALTDICVTKGKMPKAEFIESFSGSETDEGW
LDRVCDPAKPYAAAIKAHAEEIRRIQAKLAQIEKENRLDIALIKDIHRRV
SAGENQARLAKREMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNR
ISRQMLQEMGREPTPDELAARMDMPEDKVRKVMKIAKEPISMETPIGDDD
DSHLGDFIEDSRVLSPVEHATVASLRETTQQVLAGLTAREAKVLRMRFGI
DMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLDIE
>MCA1471 rpoE, RNA polymerase sigma-30 factor
MEMSEELDDELVGRVQRGDKRAFDLLVRKYQYKITQLISRYIKDPYESLD
VAQEAFIKAYRALPGFRGDSQFYTWLYRIAINTAKNYLVTHARRPREDEF
DVESAEQFENGHRLKDVDTPEAALLSDELAATIQSALDELPEELKLAITL
RELDGLSYDEIAEVMSCPVGTVRSRIFRAREAIDKRLRPLLD
>MCA0136 rpoH, RNA polymerase sigma-32 factor
MTYELTLPTHLPLGSIDDYFAAVNRLPRLDADEERELAIRFRDEQDLEAA
RRLVLANLRFVAYIARGYLGYGLPLADLIQEGNIGLMKAVKRYDPDVGVR
LVSFAVHWIRAEIHEFIIQNWRIVKIATTKAQRKLFFNLRKMKNRLGWLT
PEEAAAVAAELGVDVEDVYKMENRLNNPDMALEAHGEDDGDDRESHAPIH
YLQQEGGDPALLIEHSEWENRQQEKLQEAIGQLDERSRDIVASRWLSEDK
LTLHDLAARYNVSAERIRQLESSAMKKLRNALADAA
>MCA0741 rpoN, RNA polymerase sigma-54 factor
MKQSLQLRLGQQLAMTPQLQQAIKLLQMSTLELQQEIQQALDSNMMLEIT
DEEEPVLNAVTEEPPLAAAEPAYAELPDLDTQTTIPDELPVDSSWEDVFD
GMHNYTPSNAAEPENEDFLGQRGKGQSLQDYLLWQMELTPFTERDHAIAT
AIIDAVDDDGYLDATVEEITQGLSSQLENLEQDEVRAVLHRIQNFDPPGI
AAENPADCLRIQLQQMPENTPYRAQALELVRHHVDLLAKKDLVRLKKALE
LDDDELAEVIRLVRSLDPKPGRAVEPDDYQYIIPDVFVYRQGTEWAVALN
PEIAPRLRVNPYYSGLIRRADSSSDNVTMRNHLQEARWFIKSLQSRNETL
LKVARAIVDRQREFLEIGETAMKPLVLRDIAEEVSMHESTISRVTTQKYM
HTPNGIYEFKYFFSSHVSTDSGGECSATAIKAFLKEIVSKEDATRPLSDH
AIAGMLKDKGINVARRTIAKYREAMGIPPSNERKQLF
>MCA2022 rpoZ, DNA-directed RNA polymerase, omega subunit
MARITVEDCLDKVENRFQLVLLASKRARVLARHPEEAKVTWDNDKPTVVA
LREIAEGHITPAYMKEKVKTDRYPIERPMPAPRDDLADLDDDI
>MCA2206 scpB, segregation and condensation protein B
MDLKAILEAALFAAQRPLSLAELEALFGEDERPATEEIRLALATLADEYA
ARPLELRKVASGYRFQVRAAYAPWISRLFEERPGRYSRALLETLAIIAYR
QPVTRGQIEEIRGVAVSSGIIRTLTEREWVTVVGHRDVPGRPALFATTPQ
FLDHFNLESLADLPALPEFAVSPELEDVLAAAQTDPTHPSEEPPDPADAE
A
>MCA2023 spoT, guanosine-3,5-bis(diphosphate)3-pyrophosphohydro lase
MSSYAVADAPPPQEPAETPQEKLARRLGHLTSSYLEPAQVAEIQKAYEVA
AKAHEGQFRLSGEPYVCHPLSVAIILAEMRMDAKGIMAALLHDVIEDTPL
TKEDLSARFGAEVAELVDGVSKLTQLDCKSRAEAQAENVRKMVLAMVKDL
RVIMVKLADRLHNMRTLDVMNPGRRCRIARETLDIYAPIAHRLGMNEVRL
ELENLGFSAMYPMRHRVLEQCVKKARGNRKEVLATIESTLKARLKDCGMP
DARIIGREKHLYSLYQKMRSKHLPFAQVYDVYAFRIVVDSPDECYRALGA
VHNLYKPIPGRFKDYIALPKANGYQSLHTVLIGPFGLPLEIQIRTHAMHH
MAESGIAAHWLYKSETDPAAGSQARAREWLRDLLEIQKSAGDSLEFLDNL
KVDLFQHECYVFTPKGRIIKLPRGATIVDFAYAVHTDIGNSCVSARVNRI
LAPLHSVLENGQTIEIITAPWARPNPLWLNYVVTAKARAAIRSHLRNFKK
QEAVNLGRRLLEKELANHGLNLEAIPPQQLENFTRSLELASFESLLEDLG
LGNRLPFLVVQQMLHGERESGKGAPSPAAEKSARMPLVIKGTEGVVVNLA
KCCRPIPGDPIVGFFNPGKGIVVHLTDCKNAAELRRKQINSLDVEWDRAA
SGMFPAMIRLELMNRVGTLAQVASAISRMEADIENVQITNQDDQISTDVI
TIGVKDRVHLARVMRELRRLSIVLKISRVKSELRK
>MCA1976 vacB, ribonuclease R
MNTSSAAAASREREFRHKDPYAEREARKYERPIPSRELILKVLQDIGVPA
NLEEVADALGVDDAEDRESLRRRLNAMERDGQLLRNRRDRFCVVNAKDLI
AGRVIGHPDGFGFLHPDDGSADLFISPKDMRALIHDDRVVVSVRGIDRRG
RREAAVVQVLERNTHSTVGRLYIENDIAYVVPDNKRIPLDILVPENALAG
ASHGQIVVVEIVEQPTARREPIGRIVEILGDHMAPGMEIEVAIRNYNLPN
QWPEDVETVIASLAPAVPEEAKAGRIDLRELPLVTIDGEDARDFDDAVYC
RRTPKGWKLYVAIADVSYYVRPGTALDREAQTRGTSVYFPERVIPMLPEV
LSNGLCSLNPEEDRLCMVCEMVLDEDGNIGRAKFYEAVMRSHARLTYTQV
ARILVDGDKELRRRYKALVPHLENLYSVYRNLRRAREERGAIDFETQESR
IVFGAGRKIDTIIPVVRNDAHRLIEECMIAANMATARFLAKKKVPHLLRV
HEGPTAERLADLRTFLGEVGLNLGGGDNPEPRHYAELIEAIRGRPDEHLV
QTVLLRSLAQAVYSPDKKGHFGLASDAYTHFTSPIRRYPDLLTHRAIKHA
LSKAKASDFAYSHNDLVLAGEHCSTCERRADEATRDVVSWLKCEFMLDKL
GEEFDAVISAVTSFGFFAELRDIFVEGLVHISNLDKDFFHYDPIGHRLTG
ERSGVRYRLGDTVRVKVARVDLDERKIDLDLVKKTADAPEPRSKRRKRSR
KRGKK