Gene list
Applied filters:
COG category: Transcription
Gene type: CDS
Genomic element: chromosome
Number of genes found: 70
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Prochlorococcus marinus str. MIT 9313, MIT9313 | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | PMT0118 | possible transcriptional regulator | SubName: Full=Possible transcriptional regulator; | chromosome | CDS | 135307 | 990 | - | 0.556566 |
NA | PMT1499 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1582341 | 393 | - | 0.53944 |
NA | PMT1725 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1827937 | 1446 | + | 0.561549 |
NA | PMT0146 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 165260 | 873 | + | 0.546392 |
NA | PMT2200 | possible transcriptional regulator protein | SubName: Full=Possible transcriptional regulator protein; | chromosome | CDS | 2325336 | 2088 | + | 0.570402 |
NA | PMT0741 | probable ribonuclease II | SubName: Full=Probable ribonuclease II; EC=3.1.13.1; | chromosome | CDS | 807496 | 2067 | + | 0.471698 |
NA | PMT1357 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 1442488 | 723 | + | 0.478562 |
NA | PMT0082 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 87907 | 465 | - | 0.544086 | |
NA | PMT1141 | conserved hypothetical | SubName: Full=Conserved hypothetical; Flags: Precursor; | chromosome | CDS | 1230953 | 477 | + | 0.540881 |
NA | PMT1191 | possible acetyltransferase | SubName: Full=Possible acetyltransferase; | chromosome | CDS | 1281415 | 501 | - | 0.516966 |
NA | PMT2014 | Bacterial regulatory protein, LuxR family | SubName: Full=Bacterial regulatory protein, LuxR family; | chromosome | CDS | 2129164 | 279 | + | 0.483871 |
NA | PMT0635 | putative SOS mutagenesis protein UmuD | SubName: Full=Putative SOS mutagenesis protein UmuD; EC=3.4.21.-; | chromosome | CDS | 688212 | 495 | + | 0.561616 |
NA | PMT0867 | product possible regulatory protein, luxR family | SubName: Full=Product possible regulatory protein, luxR family; | chromosome | CDS | 950668 | 225 | + | 0.511111 |
NA | PMT0304 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 349847 | 150 | - | 0.46 | |
NA | PMT1405 | possible DNA-binding response regulator | SubName: Full=Possible DNA-binding response regulator; | chromosome | CDS | 1491175 | 699 | + | 0.540773 |
NA | PMT1527 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1618367 | 279 | + | 0.587814 |
NA | PMT0437 | ROK family | SubName: Full=ROK family; | chromosome | CDS | 491650 | 915 | - | 0.563934 |
NA | PMT0581 | putative DNA helicase | SubName: Full=Putative DNA helicase; EC=3.6.1.-; | chromosome | CDS | 637572 | 2541 | - | 0.541913 |
NA | PMT1667 | conserved hypothetical protein | RecName: Full=Transcriptional repressor NrdR; | chromosome | CDS | 1771697 | 477 | + | 0.48847 |
NA | PMT0733 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 798071 | 243 | + | 0.465021 |
NA | PMT1068 | Type II alternative RNA polymerase sigma factor, sigma-70 family | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 1153457 | 963 | - | 0.54621 |
NA | PMT1361 | similar to chloroplast membrane-associated 30 kD protein | SubName: Full=Similar to chloroplast membrane-associated 30 kD protein; | chromosome | CDS | 1447420 | 804 | - | 0.558458 |
NA | PMT0805 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 882443 | 726 | - | 0.528926 |
NA | PMT1083 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; Flags: Precursor; | chromosome | CDS | 1169058 | 1908 | - | 0.533543 |
NA | PMT2158 | SNF2 related domain:DEAD/DEAH box helicase | SubName: Full=SNF2 related domain:DEAD/DEAH box helicase; | chromosome | CDS | 2279486 | 3300 | + | 0.57697 |
NA | PMT0775 | Transcriptional-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 846450 | 3582 | + | 0.48297 |
NA | PMT0970 | possible Herpesvirus VP23 like capsid protein | SubName: Full=Possible Herpesvirus VP23 like capsid protein; | chromosome | CDS | 1048734 | 291 | - | 0.460481 |
NA | PMT1139 | possible Glycosyl hydrolases family 32 | SubName: Full=Possible Glycosyl hydrolases family 32; | chromosome | CDS | 1229715 | 258 | + | 0.445736 |
NA | PMT0127 | Type II alternative RNA polymerase sigma factor, sigma-70 family | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 143622 | 1008 | + | 0.556548 |
NA | PMT1623 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1724417 | 756 | - | 0.575397 |
NA | PMT0784 | putative type III sigma factor | SubName: Full=Putative type III sigma factor; | chromosome | CDS | 859077 | 810 | + | 0.466667 |
NA | PMT1168 | Helicase C-terminal domain | SubName: Full=Helicase C-terminal domain; | chromosome | CDS | 1260075 | 1317 | + | 0.566439 |
NA | PMT2197 | Bacterial regulatory proteins, ArsR family | SubName: Full=Bacterial regulatory proteins, ArsR family; | chromosome | CDS | 2323417 | 306 | + | 0.555556 |
NA | PMT2246 | Type II alternative RNA polymerase sigma factor, sigma-70 family | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 2374409 | 1035 | + | 0.537198 |
NA | PMT1097 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 1187783 | 774 | + | 0.547804 |
NA | PMT0012 | Protein phosphatase 2C domain | SubName: Full=Protein phosphatase 2C domain; | chromosome | CDS | 14264 | 1404 | + | 0.526353 |
NA | PMT0154 | Eukaryotic protein kinase:Serine/Threonine protein kinase | SubName: Full=Eukaryotic protein kinase:Serine/Threonine protein kinase; | chromosome | CDS | 172364 | 1890 | + | 0.555556 |
NA | PMT1079 | similar to membrane bound transcriptional regulator | SubName: Full=Similar to membrane bound transcriptional regulator; | chromosome | CDS | 1164522 | 897 | - | 0.469342 |
NA | PMT0475 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; | chromosome | CDS | 527777 | 492 | + | 0.510163 |
NA | PMT2043 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 2155849 | 726 | - | 0.544077 |
NA | PMT1655 | possible transcriptional regulator, luxR family | SubName: Full=Possible transcriptional regulator, luxR family; | chromosome | CDS | 1761822 | 288 | + | 0.527778 |
NA | PMT0734 | possible Arginine repressor, C-terminal domain | SubName: Full=Possible Arginine repressor, C-terminal domain; | chromosome | CDS | 798376 | 411 | + | 0.489051 |
NA | PMT0346 | Type II alternative RNA polymerase sigma factor, sigma-70 family | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 394088 | 942 | + | 0.505308 |
NA | PMT2217 | Putative type II alternative RNA polymerase sigma factor | RecName: Full=RNA polymerase sigma factor; | chromosome | CDS | 2344770 | 1131 | + | 0.538462 |
NA | PMT0037 | SWI/SNF family helicase_2 | SubName: Full=SWI/SNF family helicase_2; Flags: Precursor; | chromosome | CDS | 38153 | 1629 | + | 0.539595 |
NA | PMT1607 | Bacterial regulatory proteins, AsnC family | SubName: Full=Bacterial regulatory proteins, AsnC family; | chromosome | CDS | 1707682 | 648 | + | 0.544753 |
NA | PMT0683 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 738583 | 534 | - | 0.496255 |
NA | PMT0380 | SOS function regulatory protein, LexA repressor | RecName: Full=LexA repressor; EC=3.4.21.88; | chromosome | CDS | 429943 | 624 | + | 0.567308 |
arsA | PMT1001 | Bacterial regulatory proteins, ArsR family | SubName: Full=Bacterial regulatory proteins, ArsR family; | chromosome | CDS | 1079196 | 330 | + | 0.457576 |
hrcA | PMT2026 | Negative regulator of class I heat shock protein | RecName: Full=Heat-inducible transcription repressor HrcA; | chromosome | CDS | 2137664 | 1059 | + | 0.600567 |
lytR | PMT1072 | possible LytR-membrane bound transcriptional regulator | SubName: Full=Possible LytR-membrane bound transcriptional regulator; | chromosome | CDS | 1158117 | 1002 | + | 0.546906 |
nusA | PMT1526 | N utilization substance protein A | SubName: Full=N utilization substance protein A; | chromosome | CDS | 1616922 | 1449 | + | 0.550725 |
nusB | PMT0010 | Antitermination protein NusB | SubName: Full=Antitermination protein NusB; | chromosome | CDS | 12079 | 669 | + | 0.475336 |
nusG | PMT2087 | transcription antitermination protein, NusG | RecName: Full=Transcription termination/antitermination protein NusG; | chromosome | CDS | 2201616 | 672 | + | 0.540179 |
phoB | PMT0994 | two-component response regulator, phosphate | SubName: Full=Two-component response regulator, phosphate; | chromosome | CDS | 1072591 | 738 | + | 0.406504 |
rbcR | PMT2007 | putative Rubisco transcriptional regulator | SubName: Full=Putative Rubisco transcriptional regulator; | chromosome | CDS | 2119998 | 972 | - | 0.537037 |
rimI | PMT0510 | GCN5-related N-acetyltransferase | SubName: Full=GCN5-related N-acetyltransferase; EC=2.3.1.128; | chromosome | CDS | 560588 | 885 | - | 0.529944 |
rnc | PMT1949 | putative ribonuclease III | RecName: Full=Ribonuclease 3; EC=3.1.26.3; AltName: Full=Ribonuclease III; | chromosome | CDS | 2059896 | 846 | + | 0.553191 |
rpaA | PMT1988 | two-component response regulator | SubName: Full=Two-component response regulator; | chromosome | CDS | 2101516 | 807 | + | 0.534077 |
rpaB | PMT1994 | two-component response regulator | SubName: Full=Two-component response regulator; Flags: Precursor; | chromosome | CDS | 2108447 | 747 | + | 0.548862 |
rpoA | PMT1755 | Bacterial RNA polymerase, alpha chain | RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=RNAP subunit alpha; EC=2.7.7.6; AltName: Full=RNA polymerase subunit alpha; AltName: Full=Transcriptase subunit alpha; | chromosome | CDS | 1847548 | 939 | + | 0.555911 |
rpoB | PMT1507 | RNA polymerases beta subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 1593258 | 3294 | - | 0.518822 |
rpoC1 | PMT1506 | RNA polymerase gamma subunit | RecName: Full=DNA-directed RNA polymerase subunit gamma; Short=RNAP subunit gamma; EC=2.7.7.6; AltName: Full=RNA polymerase subunit gamma; AltName: Full=Transcriptase subunit gamma; | chromosome | CDS | 1591304 | 1905 | - | 0.501312 |
rpoC2 | PMT1505 | RNA polymerase beta prime subunit | RecName: Full=DNA-directed RNA polymerase subunit beta; Short=RNAP subunit beta; EC=2.7.7.6; AltName: Full=RNA polymerase subunit beta; AltName: Full=Transcriptase subunit beta; | chromosome | CDS | 1587132 | 4125 | - | 0.544485 |
rpoZ | PMT1442 | putative DNA-directed RNA polymerase (omega chain) | RecName: Full=DNA-directed RNA polymerase subunit omega; Short=RNAP omega subunit; EC=2.7.7.6; AltName: Full=RNA polymerase omega subunit; AltName: Full=Transcriptase subunit omega; | chromosome | CDS | 1528625 | 228 | - | 0.561404 |
sigA, rpoD | PMT1272 | Putative principal RNA polymerase sigma factor | RecName: Full=RNA polymerase sigma factor SigA; | chromosome | CDS | 1359893 | 1386 | + | 0.510101 |
sigB,rpoD | PMT0456 | Sigma-70 factor family | SubName: Full=Sigma-70 factor family; | chromosome | CDS | 512667 | 927 | + | 0.502697 |
spoT | PMT2111 | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase | SubName: Full=Guanosine-3,5-bis(Diphosphate) 3-diphosphatase, (PpGpp)ase; EC=3.1.7.2; | chromosome | CDS | 2225482 | 2331 | + | 0.528529 |
ureG | PMT2230 | Urease accessory protein UreG | RecName: Full=Urease accessory protein UreG; | chromosome | CDS | 2357571 | 609 | - | 0.528736 |
zam | PMT0766 | putative acetazolamide conferring resistance protein Zam | SubName: Full=Putative acetazolamide conferring resistance protein Zam; | chromosome | CDS | 835005 | 2394 | + | 0.483292 |