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Gene list

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COG category: Translation, ribosomal structure and biogenesis
Gene type: CDS
Genomic element: chromosome II

Number of genes found: 9

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# Pseudoalteromonas haloplanktis TAC125, TAC125

>PSHAb0351 putative acetyltransferase
MRRQFNTERLIIRHAVEADAGDLLKLVNQKSFIKYIGDKKVYTLEDAIIY
IKQAFSEAHQSQGFGPYVITLKNQQLVGVVGFYSRAMLQHPDIGFALLTA
FEKQGYIYEAAKALVENKSIFGINKLCAITSIDNSASQNVLIKLGFKPQG
QVIIDKESRSVVSLFLYH
>PSHAb0516 putative cold-shock RNA methyltransferase
MSKQQAVIGLLNPKSPTNVGGVLRAAGCYDAQQVFFTGNRYLNAQKFHTD
TKNVVERISLTATDNLEKVKPQGATVVVIELIEGATPLPEFTHPENAFYV
FGPEDGSVSKDVLKWADEVVYIPTIGCMNLAATCNVVLYDRLAKLGGVES
SDTTIINSRDTNNKMKWEKA
>PSHAb0038 putative protein with Class I peptide chain release factor domain and peptidyl-tRNA hydrolase domain
MLTISNTVTIDEWEVELTAVRSQGAGGQNVNKVASAIHLRFDINRSKLPD
FYKERLLALNDSRITKDGVLIIKAQSHRTQELNREDAFKRLKDLIISATK
VNKARRATKPSRNSQRKRMDKKTKHGQTKALRGNIKL
>PSHAb0230 putative secreted protein similar to a protein present in D. psychrophila
MFNTTLKPLLLSAALLATSLASQAQSTTNNLHDSWNALLNKHVVAINHNH
STEVDYAAIKREHAQLKTYLDSLSAVTQNEFDAWEKPKQLAFLINAYNAW
TVELILTKYPNLKSIKDLGSFFSSPWSKEFVPLLGKTRSLDDIEHGLIRG
SGKYNDPRIHFAVNCASIGCPALREEAFTATELESQLQQQTVRFLSDTTR
NMAQENTLNISSIFKWYGDDFEQGFNGANTLQQFFLQYSDALKLVPAQQK
ALKNNDMKVKFLDYSWDLNARQ
>PSHAb0137 hisS, histidine tRNA synthetase
MAKQIQAVRGMNDCLPGDTQVWQKVENILRETVASFGYQEIRFPIVESTD
LFKRSIGEVTDIVEKEMYTFADRNGDLLTLRPEGTAVCVRAGNENGLLYN
QEQRLWYMGPMFRHERPQKGRYRQFHQFGLETFGIASADIDAEVILLTAQ
LWESFGISEHVRLELNSLGSNEARANYRDALVAYLEQHLDVLDEDSKRRM
YSNPLRVLDSKNPDVQAILINAPKLSEHLDTESKEHFANLCERLDAAGVK
YTINEKLVRGLDYYNRTVFEWITDSLGAQGTVCAGGRYDGLVEQLGGKAT
PAVGFAMGLERLVLLLQALECVGDIRRNADVYLASMGDKASIQAPIIAAT
LRRDVPNLRVMVHAGGGNFKKQLKRADKSDALVAVIIGEDELEQGVVTIK
YLRERKEQVTLELEQAKALLAELINS
>PSHAb0411 rhlE, putative ATP-dependent RNA helicase with P-loop hydrolase domain; DEAD-box protein family
MNFKSFSFAPELVQALDELNYHTLTPIQRAAIPAVRKGKDVLASAQTGTG
KTAAFALPIIQKLFESEVSTTNAPHALVLAPTRELAEQIANNFKDFAKHT
SLKVVSLFGGVNTAGQANALKEGVDIVVATPGRLLDHIRLGNLSLASVKH
LVLDEADRMLDMGFIEEMQGVIKSCADDRQILLFSATFPAAIKQFASKVL
KQPEIVRVDQTNSTASTVAHVVYPVEERRKQELLSELIGKKNWQQVLVFV
NMKETADELVTELNLDGIPAAVCHGDKSQGNRRRALREFKEGKVRVLVAT
EVAARGIDIDGLPRVINIDLPWLAEDYVHRIGRTGRAGKEGQAISFVSRE
EENMLFEIETLIGQKIKRVYLEGYAVSNREVLIDKIGKKPAHLRRTRANK
PSGQATGEARAVNRSRISKIRKSLKGEKLSLKK
>PSHAb0436 rluC, putative ribosomal RNA pseudouridine synthase
MTDLKRLNKFISDTGFCSRREADKYIEDGRVTVNGIRPEMGVKVSSTDVV
LVDGKTLKAIPKRVYIAYNKPVGITCTTERKIQSNIVKAVNYPDRIFPIG
RLDRPSEGLIFLTNEGDIVNKILRAGNNHEKEYVVTVDKPLNRQFVAKMG
NGVPILDTITKKCKVTQTGAQQFTIILTQGLNRQIRRMCEYLGYEVVTLK
RVRIMNVTLKGLKVGQWRHLTEQEMAIINNSISDSGKTQEHSVYDEANAL
QQQSPQAVAKPQKTSDKKRDFQGENPKRFNQGERTEERKKERSKTPYQKR
STTYVGKPKSIKANKSSDSKGILSLKK
>PSHAb0503 rnd, putative RNase D, processing tRNA precursors
MHYQLIETQNQLNTFVEQIKNKPVLAIDTEFMRRRTLYPEVALIQVYDGE
HLALIDPLAELSLFDFWQILKDPAVLKVFHSPSEDIEVFQKYAGFVPTPL
FDTQFALQILGEGNCMGFALMVKTLLDIEIDKSESRTNWLQRPLTNKQLE
YAAADAYHLLPCFNLIIDSVKAADLFNIVISESELVANKREFQTPDELLY
KDIKNAWQLRPHELAILRELAVWRRNKAIRKNLALNFVLKEHNMTEIAKR
GPASLNALRQIPGVEAIEVNRSGVEILKCIEQAKALPEEQHPAILKRLID
FPSYKKVAKEIKQKINKVAKEHNIPEDVMASKKQVNQLISWNWKLSAAQK
EQHIKPDLLSSWRYSFVKDTLKEWDV
>PSHAb0382 rpmJ, 50S ribosomal protein L36 (Ribosomal protein B)
MKVLSSLKSAKQRAGCQVVKRKGRVFVICKENPRFKAVQGMKKK