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Gene list

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COG category: Translation, ribosomal structure and biogenesis
Gene type: CDS
Genomic element: chromosome 1

Number of genes found: 10

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# Photobacterium profundum, ss9

>PBPRA2653 Putative tRNA pseudouridine synthase A
MRIALGIEYDGAKYCGWQRQVDVDSVQERLEKALSHIANKPIAVFCAGRT
DTGVHGTGQVVHFDVDVDRQMVAWTIGVNAHLPRDISVRWATQVSDDFHA
RFSATARRYRYIIYNSALRPAIFGVGVSHYHGHLDEKKMHEAAQYLVGEH
DFTSVRASQCQSRSPWRAMKHVNVSRQGDFVIIDIKANAFVHHMVRNIAG
SLIRVGRGQETPEWMKWVLEQKDRRVAGETAKAAGLYLVAVDYPEEFGLP
SSPLGPIFLPD
>PBPRA2511 NMB2018, putative pseudouridine synthase Rlu family protein
MGIYCAPLMFSLFFWIIIMFTLVHQHPDFLVINKHPGVSVHKDDGDQPLL
AEVAKQTGDEKLYLIHRLDKMTSGLLLLGRNRQAAAELSGNFAKRDVEKF
YLAIGTKKPKKKQGVVIGDMSRSRRSSWKLDSTKDNPAITQFFSTAAGNG
RRCFLCKPHTGKTHQIRVALKSVGSGITGDEIYGNEEADRGYLHAYALSF
PYKGENQQFICVPDNGELWQAEEVKQALAEWATPWLLAWPKLPGKS
>PBPRA2450 RPSA, putative ribosomal protein S1
MTESFALLFEESLQEIETRPGAIVKGTVIAIANGYVLVDAGLKSESSIPV
EEFKNAAGELEIEVGAEVDVALDAIEDGFGETKLSREKAKRHEAWIQLEK
AYEEAETVVGIINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTAHLENK
ELEFKVIKLDQKRNNVVVSRRAVIESENSVERDELLASLQEGMEVKGIVK
NLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEINVKVLKFDR
ERTRVSLGLKQLGEDPWVAIAKRYPESTKLSGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCK
ANPWQSFAEMQAKGDRVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNV
TGEDAVRDFKKGDEISAVVLAVDAERERISLGIKQIEEDPFNSYVADNKK
GVLVNGTVTAVDAKGATVELAVGVEGYLRASEASVDRVEDATLVLSVGDS
VEAKFTGVDRKNRVVNLSVRAKDVAEEQEAMATLNKQEEASFGNAMADAF
KAAKGE
>PBPRA2472 STY4809, putative tRNA-(MS[2]IO[6]A)-hydroxylase
MNKTQQMIDELLSPIKQFLYCETPDAWINEAIKPENLTGLLVDHCNCELK
ASQTAMWLIRKYAVDADSGKALLEWAKPYEDFVYGRVRNTDAFHGKKNGL
SAPLVAKEGFAHGPELIDKMVRLIKEEFHHFEQVLDIMVSRNIPYSNLSA
GRYAKGLMKAVRTHEPATLIDKLIAGAYIEARSCERFAKLAPFLDDELQK
FYISLLRSEARHYQDYLQLAEQIAGHNISDRIRIIGEKEAALINSEDNMF
RFHSGIPAACSAV
>PBPRA2661 TTE0716, hypothetical protein
MAVEILHHGAKVGVTGSCHEIKLGQHGLLIDCGMFQGDESKDALDIDFPI
EHIHALLLTHSHIDHVGRIPWLLAAGFKGKIYASEATAALLPLMLADGLK
IQLGFNQQQCDQFTLLVKSRLKAIPYDCWAQIILPSGELVKIRFRPAGHI
LGSAYIEIMLSTGEIVVFSGDLGPCNTPLLVDPISPEIVDTLIIESTYGD
QVHHGIERREAQLKEIIERSLIDGGVILIPAFSVGRTQELLFDIENIIAA
SNVKNEAVNWQEIPVILDSPLAGEITAQYRNFKMLWTKEAKERKQQGRHP
LSFSQCITIELHSDHQALVNRLKISGEAAIVVAASGMCAGGRIVNYLEAL
LPDKRTDVIMIGYQARGTLGRDLYSGKCVITINKTVINVKAKIHTMSGYS
AHADQADLLKFVGGIKQGPQTIHVVHGDKQAQLAFAELLQQIKPQAKIVT
GFS
>PBPRA2482 VV1227, putative pseudouridine synthase family 1 protein
MSIMSEKLQKVLARAGQGSRREIELMIQSGRVSIDGVVAKLGDRLDDFSV
LVRIDGHKIDLVSPSEEVCRVLAYNKPEGELCTRHDPEGRRTVFDRLPRL
SSGRWVSVGRLDANTSGLLLFTTDGELANRLMHPSRSVEREYMVRVFGEI
NENMVKNLVQGVELEDGMARFEDVVYSGGEGMNHTFYVVITEGRNREVRR
LWDSQGVTVSRLKRVRYGDIYLTKDMPRGGWMELELKEVNYLREVVELEA
EENTMLTVEGLKRKRGVRQIRRAVRRHEERVTETPRGRRGRTNTPDERRS
STRNSEAEGQNVPVGKRKPSGKPSTAKPTRGKPSAGKPAQGNRRKTDDCN
EPAGKRKPSGNGAQRRNPLAVKPRTRQ
>PBPRA2613 VV2126, putative regulator protein
MREMLTNINDYDLCVTEFVRIIDSLLPSSVFYRLCPELHHGGKTTSGTPV
RVQLLGQEPVWMAENAYRASNLGSAGIDINFGCPAKSVNKNRGGAVLLKE
PEKIYQIVKEVRSAVCPTKPVTAKVRLGWDDPTHCFEIVDAVAQAGGDEI
AIHARTKVDGYKAETIKWDYIHQVKEKSSIPIIANGEVWNYQDGQACLNV
TQTDALMICRGALNLPNLCNVIKRNEAHMPWHHVIQLLLKFSEFEIKGDK
GLYYPNRVKQWFAYLRHEYPEAKDLFVDIRSLNKAAPIVEILQRAQALAH
A
>PBPRA2483 Y2053, putative translation factor
MSQFFYVHPETPQARLMTQAVAIIRNGGVVVYPTDSGYALGCQLENKQAL
ERICQIRRLNDKHNFTLLCRDLSEIANYARVDNAAFRLLRSNTPGAYTFI
FKGTKEVPRRLMSPKRKTIGIRIPNNAIALALLEELGEPLMSTSLILPNS
DVAESDPEDIRDKLEHAVDLIMNGGYLGEQPTTVIDFSNDEMEVLRVGAG
DPAPFS
>PBPRA2432 Y2271, Hypothetical ribosomal-protein-alanine acetyltransferase
MFNSIINRSTTLVVDELKIRLIGNKDSARITAYYQKNRAYLQPWEPLRDE
NFFLPEGWEKRLLQLNELHKHNLAYYFVITTKDSDDIIGVINFSNLVKHP
FYACHVGYSLAEAYQGKGIMHRALDVVVEWIFAEKQFHRIMAAYMPRNKR
SGKVLEDLGFEKEGRAKEYLLINGKWEDHILTAKTNHNWVPPK
>PBPRA2596 YPO2161, putative L-asparaginase I
MPEFHRSEMPEFTIHEYEPLIDSSDMSPEDWQRIADDIKANYDKYDGFVI
LHGTDTMAYTASALSFMFENLDKPVIVTGSQIPLAELRSDGQSNLLNSLH
IAANYPINEVTLFFNNQLIRGNRSTKAHADGFGAFISPNMPPLLEAGINI
KLNNIELDKKPEGDFKVNAITPQPIGVITMYPGISPEVIRNTLRQPVNAM
ILLTFGVGNAPQNPDLLAQLKEASERGVIVMNLTQCLSGKVNMGGYATGC
ALADAGVLSGYDMTLEAALAKLHYLLSTDFPVETIRSMMQQDLRGELSL