Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 25
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Photobacterium profundum, ss9 >PBPRA0612 putative initiation factor IF-2 MSEVTVKALAEEVGTPIDRLLQQFSDAGISKKAEDNVSQTEKQSLLSHLQ KEHGGESTDGTPTRLTLQRKTHSTLSVAGTGGKSKSVQVEVRKKRTFVKR SALEEEQRAADNAKQEAEETAQREAENVAKRKEDVRLAEEKAKRDEENKA KRNTEDTVKREATDKRKAEEKAKRTVAVKQAKSETELLQLRREEEAKRKA EEDSQRQLEEARKMAETNEKNWSATEQNVTANMEKSDYHVTTSTHARAAE DEQDRKEETTGTRRKKKPAAKKADDRKGRGGRNQRNQRGGRGKQKPQVNA PTSMQQGFDKTATVAKSDVVIGETIVVSELANKMAVKATEVIKAMMKMGA MVTINQVIDQETAALVAEEMGHKVIFRKENELEEALMSDRGETQAVESRA PVVTIMGHVDHGKTSTLDFIRKAHVASGEAGGITQHIGAYHVEIGNGMIT FLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGV PLIVAVNKIDKDGANPDNVKNELAQYDIIPEEWGGENIFVHISAKQGTNI DGLLEAILLQSEILELTAVKEGMASGVVIESRIDKGRGPVATVLVQSGTL RKGDIVLCGLEHGRVRAMRDENGKDIESAGPSIPVEILGLSGVPAAGDEA TVVRDDRKAREVALYRQGKFRDVKLARQQKSKLENMFSHMEAGEVAECNV VLKADVQGSIEAIADSLMKLSTDEVKVKVVGSGVGGITETDAVLAAASNA IILGFNVRADVPARRMIENENLDLRYYSVIYQLIDEVKAAMGGMLAPEFR QEIIGLAEVRDVFKSPKIGAIAGCMVTEGTIKRNNPIRVLRDNVVIYEGE LESLRRFKDDTNEVKNGYECGIGVKNYNDVRVGDQIEVFEIIEIQRTLD >PBPRA0625 putative peptide chain release factor RF-3 MSFLQEVGKRRTFAIISHPDAGKTTITEKVLLFGNAIQKAGTVKGRGSNQ HAKSDWMEMEKERGISVTTSVMQFPYNDCLVNLLDTPGHEDFSEDTYRTL TAVDSCLMVIDAAKGVEDRTRKLMEVTRLRDTPIVTFMNKMDREVRDPME VLDEVENELKMACAPISWPIGCGKEFKGVYHIHRDETILYESGHGHEIQE VRIIKGLDNPELDVAVGEALAASVREELELVIGAAHEFDLELFLKGELTP VFFGTALGNFGVDHMLEGLTQWAPAPQTRKANERDVEAVEEKFSGFVFKI QANMDPKHRDRIAFMRIVSGTYTKA >PBPRA0626 hypothetical protein MNHVRIGKNVSISDAVTFMAGDRTRAEKAYAGDIIGLHNHGTIQIGDTFT QGENLKFAGIPNFAPELFRRIRLKDPLRQKQLLKGLVQLSEEGAVQVFRP LQNNDLIVGAVGVLQFDVVVARLKAEYNVEAIYEGINVATARWVECDDVK ILEEFKRKNQQNLALDGGDNLTYVAPTMVNLNLAKERFPAVEFHATREH >PBPRA0613 putative ribosome-binding factor A MTTISSVEVSRDMCYAKVFVTFFTIGEQTAKGSLAVLREMAPYIRSLLGK QIRLRVTPELTFIFDESLTEGMRISNLVSNAVRDDEKRRVDEDNTEEGED K >PBPRA0570 putative lysyl-tRNA synthetase MTDQVQDENKLIAERRAKLDMIRKNCKANGHPNDFRRDSLAADLQATFGE KTKPELEEEGHIVAIAGRVMAKRGPFLAIQDVSGRIQAYADKTVQKELKE KYSGLDIGDIIGVKGQLHLSGKGDLYVTMDNYELLTKALRPLPEKFHGLT DQETRYRQRYVDLIVNEDSRNTMIMRSKVVSAIRNFMMKKDFMEVETPMM HVIPGGATARPFITHHNALDIDMYLRVAPELYLKRLVVGGFERVFEINRN FRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIATDLHGSPKL PYGDAIVDFGGPYPRISMLNAIKQYNPDNAEIQALTYEQVADRELMANIA RGLDIYVEKFWTCGQLLEEIFGETAEPQLMQPTFITEYPADISPLARRND TNDFITDRFEFFIGGREVANGFSELNDAQDQDQRFKAQVNAKDAGDDEAM YYDADYITALEHGLPPTAGQGIGIDRLVMLFTNTHTIRDVILFPALRPQN KA >PBPRA0433 BFL058, putative ribosomal protein S21 MPVIKVRENEPFDVALRRFKRSCEKAGILSEVRRREHFEKPTTVRKRAKA AAVKRHLKKLARENARRVRLY >PBPRA0616 C3920, putative polyribonucleotide nucleotidyltransferase MNPIVKTFQYGNHTVTLETGVMARQATAAVMASMDDTSVFVSVVGKKAAV EGQDFFPLTVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRP LFPSAFKNEVQVIATVVSVNPEVNPDMITMIATSAALAISGLPFNGPIGA ARVGFINDQFVLNPSNTELEESRLDLVVSGTKDAVLMVESEADRLSEETM LQAVVYGHDQQQVVINAINEFAAEVATPAWDWTAPVVNAELKARVADKAA TRLSDAYQITEKMARYDEVGSIKNDVVASLLAEDETLDERELRGMLSSLE KHVVRGRIIAGHPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQAL VTATLGTQRDAQIIDSIMGEKKDHFLLHYNFPPYCVGETGFVGSPKRREI GHGKLAKRGIAAVMPSVEEFPYTVRVVSEITESNGSSSMASVCGTSLALM DAGVPIKASVAGIAMGLVKEGDDFVVLSDILGDEDHLGDMDFKVAGTDDG ITALQMDIKIEGITKEIMQIALNQAKGARKHILSVMDDAIGTHRDDISQF APRIHTMKINSDKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAATE GAAAKEAIRRIEEITADVEVGRIYTGKVMRIVDFGAFVSVIGAKEGLVHI SQIAQERVEKVSDHLQMGQEVQVKVLEIDRQGRIRLSMKEAVADQNPATV QDEQPQG >PBPRA0614 EBIG1690, putative tRNA pseudouridine 5S synthase MARRRKGRPIDGVILLDKPTGITSNDTLQKVKRIFFAQKAGHTGALDPLA TGMLPICFGEATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETREV KVDRGQLERCIAKFRGTTDQIPSMFSALKYQGRPLYEYAREGIEIPRESR KITVHSIELLRFEGHEVEMEVHCSKGTYIRTITDDLGEMLGCGAHVVYLR RTGVSDYPMENVVTLEQLQALRDQAIEQGIEPGELLDPLLLPTDSAVQDL PEANVTVEGGDAILHGQPVKASQLPEQGTLVRITVGEQRDFIGIGEIDQN NMVAPKRVMANKQDEA >PBPRA0591 ECS0029, putative Isoleucyl-tRNA synthetase MSDYKDTLNLPETGFPMRGNLAQREPVMLKRWDDEDLYGEIRKAKKGNKS FILHDGPPYANGDIHIGHALNKILKDIIIKSKTLSGFDAPYIPGWDCHGL PIELMVEKKWGKPGRKLTAAEFRQKCREYAAGQVEGQKESFIRLGVLGQW DKPYRTMDFATEANIIRSLGKVAENDHLLKGFKPVHWCTDCGSALAEAEV EYQDKVSPSIDVKFKAVDEAGVVAKFNCAEGHEGQGDVSVVIWTTTPWTM PANRAVAVRDDLEYVLVQVEADAANDKAAYRLIVAAELAKDVMDRAGIEH FHNLGFCKGADLELMRFNHPFYSFDVPIVLGDHVTTESGTGCVHTAPGHG QEDFVVGQKYGLEIANPVGSNGVYLPDTELFAGQHVFKANDVVVETLKEH GALLHHHAYEHSYPHCWRHKTPIIFRATPQWFISMDKAGLRAKALGEIKN VQWLPEWGQSRIEGMVEGRPEWCISRQRTWGVPIALFVHKETQELHPDTR VLIEKVAQLVEQKGIQAWWDLNPAELMGEADAANYEKVLDTLDVWFDSGV THFSVVDSREEYNGHSADLYLEGSDQHRGWFQSSLVSSVAMKGKAPYNQV LTHGFVVDGQGRKMSKSVGNVVAPKDVTNKLGADILRLWVASTDYTGEVA VSDEILKRSADAYRRIRNTARFFLANLNGFNPETDLVAPEEMVALDRWAV GRAMEAQEEIIKAYDGYNLHGVTQRLMQFCSVEMGSFYLDVIKDRQYTAK QGGHAQRSCQTALFYIVEALVRWMAPIMSFTADEIWNEMPASQGNGEQRD KFVFTGEWFEGLFGLADDEVMNDEFWAEIQQVRGAVNKLLELARKDKVIG GSLQAEITLHANETLAAKLNTLEDELRFVLLTSKAAVAITDSMPEGAQKT DVEGLFVTVNASEAAKCDRCWHHVADVGTIEGHEEVCGRCVTNISGEGEE RKFA >PBPRA0489 ECS3853, hypothetical Tn5 transposase MATILAFLAARILQLKFMGQNIKADEESCESVLSPIGWKLLWLKRENKPL PNEVPSIRWAYLALAKLGGWNDSKRTGRAGWPVLWDGWFKLQTIIEGYHL AQSLECLDL >PBPRA0470 ECS3993, Putative translation initiation inhibitor MTQVLHTDQAPAAIGPYVQGVDLGNMVLTSGQIPVNPVTGEVPEAIAEQA RQSLENVKAVVASSGLNVSDIVKMTVFVKDLNDFATVNEVYGQFFDEHNA PYPARSCVEVARLPKDVKIEIEAIAVRK >PBPRA0483 ECS5235, putative Valyl-tRNA synthetase MLAFKYRPPLPLRRPNSHIDPSKSAMEKTYNPQSIEQALYQRWEEAGYFK PHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLW QVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTI TKQLRRLGASVDWDRERFTMDDGLSAATQEVFVRLFEEDLIYRGKRLVNW DPKLHTAISDLEVESKDKKGFMWHFRYPLADGVKTADGKDYIVVATTRPE TMLGDTGVAVNPEDPRYKDLIGKQIKLPIVGRLIPIVGDEHADMDKGTGC VKITPAHDFNDYEVGKRHSLPMINILTFNADIRDAAEVFDTNGEANDAYN SELPAKYHGMERFAARKAIVAEFDELGLLEEVKDHDLTVPYGDRGGVAIE PMLTDQWYVRTAPLAAPAVKAVEDGQIQFVPKQYENMYFAWMRDVQDWCI SRQLWWGHRIPAWYDNYGKVYVGRTEDEVREKNNLASVVVLRQDDDVLDT WFSSALWTFGTQGWPENTDALKTFHPSEVLVSGFDIIFFWVARMIMMTMH FVKDEEGNAQVPFKTVYMTGLIRDENGDKMSKSKGNVLDPIDMIDGIGLE ELVEKRCGNMMQPKLAAKIEKQTRKAFEGGIEPYGTDALRFTLAAMASTG RDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEHDCGMAEGAELEFSLAD QWITSQFEVAAKEFNAHLDNYRLDMAANTLYEFIWNQFCDWYLELTKPVL WKGTEAQQRATRYTLITVLEKTLRLAHPILPYITESIWQSVKPLVDGVEG ETIMTQALPQFNEDNFNADVVADLEWVKAFITSIRNLRAEYDIAPSKGLD VMIKVADEKDAARIQANEIVLTSLAKLDSIKVLAKNEETQACATSLVGKS ELMIPMAGLIDKDAELARLDKEVAKTQGEIKRIEGKLNNQGFVAKAPEVV ITKEREKLEGYQETLVKLEAQKETIAAL >PBPRA0394 HD0203, putative Ribosomal protein L21 MYAVFQSGGKQHRVSEGQTLRLEKLEAETGANVEFDCVLLVANGEEVTVG APFVTGGKVTAEVVTHGRGDKIKVVKFRRRKHSRKQMGHRQWFTEVKITG ISA >PBPRA0533 PA0668, putative tyrosyl-tRNA synthetase MASIEQALAEIKRGIDELIPEEELIAKLKENRPLRIKLGADPTAPDIHLG HTVILNKLRTFQELGHDVTFLIGDFTGMVGDPTGKNTTRPPLTREDVLAN AETYKEQVFKILDPAKTKIEFNSTWLSELGAEGMIRLASNQTVARMLERD DFKKRYNGGRPIAIHEFMYPLLQGYDSVAMETDVELGGTDQKFNLLMGRE LQKSHGQKPQVVLTMPLLVGLDGVKKMSKSAHNYIGVSEVPTEMFGKIMS ISDDLMWNYFECLSFRPLEEIEQFKQDMANGKNPRDVKILLAKEIIARFH SEADADAAEQEFINRFQKGAMPEEMPELEFEAGIAISNLLKDAGLVNSTS DAMRMIRQGGAKIDGNKIEDTKLIPAAGTAVYQVGKRKFARITLK >PBPRA0587 PLU0589, putative ribosomal protein S20 MSPYQDLGVTPLANIKSAKKRAITSEKRRQHNASRRSMMRTFFKKVIAAI EAGEKENATKAFADMQPVLDRMATKGLIHKNKAARQKARLTAKIKAL >PBPRA0569 PLU3549, putative peptide chain release factor 2 MYQHVLTSLGGTFDYDAKKEQLEEVNAELEQPAVWNEPERAQALGKSRAA LEAVVETIDQLDLGVEDVAGLLELAVEEDDQETFDEIEPELAELEAKLAK LEFRRMFSGEYDSSDCYIDLQAGSGGTEAQDWTSMMLRMYLRWADAKGFK TEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETGVHRLVRKSPFDSGGR RHTSFASAFVYPEIDDNIVIDINPSDLRIDVYRASGAGGQHVNTTESAVR ITHVPTNIVVQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANED SKSDIGWGSQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDRFIEASLK SGL >PBPRA0603 PLU4536, 23S rRNA methylase MSRNKQSASSGRWLKEHFDDKYVQEAQKRGYRSRAIFKIEEIQKKDKLLK PGMTVVDLGAAPGGWSQYAAEVVGDEGQVIACDILSMDSLPGVSFLQGDF REEAVLSALLERIQPDMVDVVLSDMAPNMSGNLASDQPRAMYLVELALEM CKQVLAPNGSFAVKVFQGEGFDQYLAEIRNMFKVVKIRKPDSSRDRSREV YIVATGYKL >PBPRA0408 RLUA, putative ribosomal large subunit pseudouridine synthase A MKPLPHLDYHPPTDPWLDILQHDEDIIMLNKPSGLLSNPGRNPEHYDSVY SRVLRDYPEAHIVHRLDMSTSGLIMLAVNKDAERHLHAQFRERATQKVYY ARIWGHPDQDTGTVDLPLICDWPNRPKQKVCYEDGKPSVTHYEVVAREAQ TTLVRLHPITGRSHQLRVHMQALGHPIIGDEFYANDEANAIADRLHLHAA EIAFTHPGTKEPIHFFAPCELFPDVPMKTIEFPSADQEK >PBPRA0395 RPMA, putative Ribosomal protein L27 MAHKKAGGSTNNGRDSESKRLGVKRFGGESVLAGNIIVRQRGTKFHAGTN VGLGKDHTLFALTDGKVKFEVKGPKNRKFVTIEAA >PBPRA0615 RPS15, putative ribosomal protein S15 MSLNAETKAAIVAEYAQCENDTGSPEVQVALLTAQINHLQGHFANHKHDH HSRRGLLRMVSRRRKLLDYLKGKNLDRYQDLIKRQGLRR >PBPRA0402 SF0048, putative dimethyladenosine transferase MDSAIARPRIGRKTSMSSDQVHLGHRARKRFGQNFLNDPYIIDGIVSSIN PLPGQNLVEIGPGLGALTEPVGRLVDKFSVIELDRDLAKRLRHHPDLADK LTIYEGDAMRFDFTQLIKPNNKLRIFGNLPYNISTPLMFHLFTFHEHVED MHFMLQKEVVNRLAAGPGCKAYGRLTVMAQYYSRVTPVLEVPPESFTPAP KVDSAVVRLTPYEVLPHPCTNLKWLDRVCREGFNQRRKTIRNCYKALLTV EQLEDLGVNPGLRPENITLQQFVKMANWLDANHQNA >PBPRA0439 SF3097, putative tRNA nucleotidyltransferase MQTYLVGGAVRDALLGLKVVDKDWMVVGATPEQMLAQGYEQVGSDFPVFL HPKTKQEYALARTERKSGKGYTGFICYSAPDVTLEQDLMRRDLTINAIAQ EKDGRLIDPYNGQQDLDNKILRHVSPAFVEDPLRVLRVARFSARFAHLGF TIAPETIALMQEMVVAGELEALTPERVWKEWEKSLSTENPEVFLTVLRQC GALKVVMPEIDALFGVPQPAQWHPEIDCGIHTLMVAKQAAELSPNKVIRF AAQVHDLGKALSPKDDLPSHKMHCKDGLKPIKALCQRLRVPNDYRDTALM VCAQHTKIHHANEMRPATFVNILDQIDSWRKPERVIQLALCCRADARGRT GHENDAYLQADILLAAFDAAQQVDVKPIVAAGFKGKDIKEQLAIHRTAAV ELAIKPLQSKA >PBPRA0562 STY2836, putative ATP-dependent RNA helicase SrmB MKDFSELELDSALLNAIEEIGYTRPTEVQAQAIPHALDGRDVLASAPTGT GKTAAFLLPMIQHLLDFPRKKPGPARVLILTPTRELAIQIADHARALAKN THLKIFTITGGISYDDHAELLGKTQDIVVATPGRLMEYVESERFDCRAIE CLILDEADRMLDMGFTKIVERINHECRWRRQSLLFSATLEGKGVREFSET ILKEPVEVNSAPSRRERKKIHQLYLRCDDMDHKLALLEQILKHQAERSIV FVKTRDRLAMLRDQLASMNVKCSWIQGEMAQLSRNNAISRFRDGDVNILI ATDVAARGIDLPDISHVINFDMPRTADVYLHRIGRTARAGKKGIAISLVE AHDQAMIERVSRYMEEEVPERFINGLRPASKKAKTIKKKKVKIDKKLKVA KQKKAAKKHKKASENKPEA >PBPRA0527 YPO0427, hypothetical 16S RNA G1207 methylase RsmC MSYTAASQVVARQLAFFEGRKVLIAGELSDAYPVELANVAQSVAVFTTNF GYHNSMSRHDNIDCHFGVQLDAKLDIDMLLIYWPKAKAEADYLMSMLLAK FGPETEICIVGENRSGVRSAEKMFQPYGPLTKYDSARRCSFYWGRCDNEV KPFDLNDWFKSYPINVSGVELTVRSLPGVFSHGEFDNGSKLLINTLPSLR GKVLDFGCGAGVLGAIMKAKHPRIELELCDISALAIESAKETFKVNQLDA KFTATDVYSELKGPYNYLISNPPFHAGLKTFYTATENFIAQAPNYLFSDG QLIIVANSFLKYPELIEQSLETCNALANTNKFTIYSAKK >PBPRA0602 YPO3504, putative RNA-binding protein MFSTLIHKNRVIMNLSTKQKQHLKGLAHNLKPVVLMGSNGLTEAVIAEIE IALNHHELIKIKVATEDRETKILIVDAIIRETKAEKVQLIGKTLVLYRQT EERKIELPRK