Gene list
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COG category: Translation, ribosomal structure and biogenesis
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 40
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# Photobacterium profundum, ss9 >PBPRA0319 putative ribosomal protein S10 MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVKGPIPLPTRKERFT VLTSPHVNKDARDQYEIRTHKRLIDIVEPTDKTVDALMRLDLAAGVDVQI SLG >PBPRA0320 putative ribosomal protein L3 MIGLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQI TTGTKKANRVSKPAAGHFAKAGVEAGRGLWEFRLENGEEFAVGAELNVEL FNEVKKVDVTGTSKGKGFQGVIKRWNFSTQDMTHGNSLSHRAPGSIGQCQ TPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGSIGGN VIVKPAVKA >PBPRA0344 putative ribosomal protein S4 MGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGQHGARRGRLSDYGVQ LREKQKVRRTYGVLEKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYR MGFGSTRAESRQLVSHKAILVNGTVVNVPSFKVAANDVVSIREKAKNQAR IKAALEVATQRELPTWVEVDNSKLEGTFKRLPERSDLSADINEHLIVELY SK >PBPRA0286 putative tryptophanyl-tRNA synthetase MSKPIVLSGVQPSGELSIGNYMGALRQWEQMQDDFDCQYCVVDLHAITVR QDPKALHEATLDALAICLAVGVDPKKSSLFVQSHVPEHAQLGWILNCYTQ MGELNRMTQFKDKSARHANDVNVGLYGYPVLMAADILLYGAHKVPVGSDQ KQHLELARDIANRFNNLYGSEDQPIFEVPEPYIPAMNARVMSLQDATRKM SKSDDNRKNVITLLEEPKSILKKINKAQTDAQNPPSIIHDVENKAGIANL MGLYSGATGKTFADIEAQYAGVEMYGPFKKDVGEAIVAMLEPVQAEYKRI RADRAYMDAVMKAGAEKASARAAVTLKKAYEAVGFVARP >PBPRA0323 putative ribosomal protein L2 MAIVKCKPTSPGRRHVVKVVNSDLHKGKPYAPLLEKKSKSGGRNNNGRIT VRHIGGGNKQHYRLIDFKRTKDGIPAKVERLEYDPNRSANIALVLYADGE RRYIIAPKGVSAGDMIQSGEDAAIKVGNTLPMRNIPVGSTVHCVELKPGK GAQLARSAGAYAQIIARTGTYVTLRLRSGEMRKVLSECRATLGEVGNSEH MLRELGKAGASRWRGIRPTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPWG VPTKGYKTRSNKRTDKYIVRSRNKK >PBPRA0341 BPP0053, putative ribosomal protein L36 MKVRASVKKICRNCKVIKRNGVVRIICIEPKHKQRQG >PBPRA0056 GLYQ, Putative glycyl-tRNA synthetase, alpha chain MRGILEYYFSSTNLAKFTMQNYDIKTFQGMILALQDYWGKQGCTIVQPLD MEVGAGTSHPMTCLRALGPEPIAAAYVQPSRRPTDGRYGENPNRLQHYYQ FQVMLKPSPDNIQELYLGSLEVLGVDTQVHDIRFVEDNWENPTLGAWGLG WEVWLNGMEVTQFTYFQQVGGIECKPVTGEITYGIERLAMYIQNVDSVYD LVWTDGPLGKVTYGDIFHQNEVEQSTYNFEHADVDFLFTFFDQCEKECKE LLALETPLSLPAYERILKAGHAFNLLDARKAISVTERQRYILRIRNLTKQ VAEAYYASREALGFPMCKKDK >PBPRA0055 GLYS, Putative glycyl-tRNA synthetase, beta chain MTERNFLIELGTEELPPKALRTLAEAFSSNFEAELKTAALVHQGIEWFAT PRRLALKVTALATGQADSVVEKRGPAISAAFDAEGNPTKAAQGWARGNGI TVEQADTLKTEKGEWLLYKQEVKGKPAQELLSGLAAAALAKLPIPKPMRW GNNEIQFIRPVKTLTMLLGDELIEGNILGADSARIIRGHRFMGEAEFTID NADQYPAILEERGKVMANYEARKAIILEGAKKAALEVGGIADLEDELVEE VTSLVEWPVVLTASFEENFLNVPTEALVYTMKGDQKYFPVYDAEGNLIPK FIFVTNIESKDPRQIIEGNEKVVRPRLADAEFFFKTDRKRPLVDRLPELE KAIFQKQLGTIKDKTDRITELAGYIAEQIGADVTNAKRAGLLAKCDLMTS MVFEFTDTQGVMGMHYARHDGEAEDVALALYEQYMPRFAGDKLPSTGVSA AVAMADKIDTLVGIFGIGQAPKGSDPFALRRAALGVLRIIVEKDYSLDLV DLIAKARAQFGDKLTNANVEDEVIDFMLGRFRAWYQDEGHSVDVILAVLA LRPTQPADFDKRVKAVSHFRSLDAAESLAAANKRVGNILAKFDGELPLAV DSSLLLEDAEKALAEKVEAMIATLAPVFAEGNYQQALSELATLREPVDAF FDNVMVMADDEKLKVNRLTMLNLLRNEFLKVADISLVQK >PBPRA0343 HD1953, putative ribosomal protein S11 MAKQPTRARKRVRKQVADGVAHIHASFNNTIVTITDRQGNALSWATAGGS GFRGSRKSTPFAAQVAAERCGEMAKEYGVKNLEVMVKGPGPGRESTIRAL NAAGFRITNIVDATPIPHNGCRPPKKRRV >PBPRA0337 HD1961, putative ribosomal subunit protein S5 MANEKTQSDLNEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRIGFGYG KAREVPAAIQKSMEKARRNMVTVALNEGTLHHAVKGRHTGSKVYMQPASE GTGIIAGGAMRAVLEVAGIRNVLAKAYGSTNPINVVRATIAGLSGMNSPE MIAAKRGLSVKEILG >PBPRA0315 PLU0431, putative elongation factor G MSRKTPIERYRNIGICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATM DWMEQEQERGITITSAATTTFWRGMEAQFPEHRINIIDTPGHVDFTIEVE RSLRVLDGAVVVFCGSSGVEPQSETVWRQADKYEVPRMVFVNKMDRVGAD FLRVVDQIKTRLGANPVPIQLNIGAEEEFKGVIDLIKMKAINWSSEDQGM TFTYEDVPADMQDLAEEWRMNLVESAAEANDELMEKYLEEGELSEEEIKA GLRQRTLNNEIVLATCGSAFKNQGVQAVLDAVIDFLPSPTEVKAITGEDE LGNAIERHSDDDEPFSALAFKIATDPFVGTLTFMRVYSGVVKSGDTVYNS VKEKRERLGRIVQMHANKREEVKEVRSGDIAAAIGLKSVTTGDTLCDLNN KIILERMEFPVPVIQIAVEPRSQADQDKMGIALGKLAAEDPSFRVETDNE SGQTLISGMGELHLDIIVDRMKREFSVDCNVGNPQVAYRETIRGTTKSEG KFIRQSGGRGQFGHVWLKIEPSEPDEGFVFVNEIVGGSVPKEFIGAVAKG VEEQMNSGVLAGFPVLDVKATLFDGSYHDVDSSEIAFQIAGSMAFRDGAL NANPVILEPMMKVEVTTPEDWMGDVVGDLNRRRGMIEGMDDGPANLKILR AQVPLSEMFGYATDLRSATQGRASYSMEFSEYAEVPKNVANRIIAERT >PBPRA0336 PLU4710, putative ribosomal protein L18 MDKKASRIRRATRARRKIAELGATRLVIHRTPRHVYAQVIAPNGSEVIAA ASTVEKVIRESIANTGNKDAAAAVGKAIAERAIEKGISNVAFDRSGFQYH GRVAALAEAAREAGLKF >PBPRA0334 PLU4712, putative ribosomal protein S8 MSMQDPISDMLTRLRNGQTAKKVAVKMPSSKQKVAIAALLKEEGFVAEFT VTGDVKPELEVTLKYFEANPVIEQIQRVSRPGLRIYKKKDALPSVMGGLG IAVVSTSKGLMTDRAARKAGLGGEIICYVA >PBPRA0333 PLU4713, putative ribosomal protein S14 MAKESMKAREAKRAKLVAKFAEKRAALKVIISDVNASEEDRWNAVLKLQS LPRDSSSSRQRNRCNQTGRPHGYLRKFGLSRIKVRETCMKGEIPGLRKAS W >PBPRA0332 PLU4714, putative ribosomal protein L5 MAKLHDYYKETVVKELVEKFEYKSIMQVPRIEKITLNMGVGEAINDKKLL ENAAADMTAIAGQKPLITKARKSVAGFKIREGYPIGCKVTLRGERMWDFF ERLISIAVPRIRDFRGLNPNSFDGRGNYSMGVREQIIFPEIDYDKVDRVR GLDITITTSAASDEESKALLSAFNFPFRK >PBPRA0326 PLU4720, putative ribosomal protein S3 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLIKELKKA SLSRVVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRAHISKIAGVPAQ INISEVRKPELDAQLVGDSIASQLERRVMFRRAMKRAVQNAMRLGAKGIK VQVGGRLGGAEIARSEWYREGRVPLHTLRADIDYATSSAHTQYGVIGVKV WIFKGEVLGGMPIEEPKADKPKKQRKSRK >PBPRA0203 PLU4864, putative ribosomal protein L28 MEKTVMSRVCQVTGKRPVTGNNRSHARNATKRRFLPNLQTHRFWVESEKR FVKLRLTAKGMRIIDKKGIDIVLAEMRVRGESV >PBPRA0338 PM1397, putative ribosomal protein L30/L7E MIDMANTIKVTQTKSSIGRLPKHVACLRGLGLRRINHTVELEDTACVRGM INKVHYMVKIEE >PBPRA0335 PM1400, putative ribosomal protein L6 MSRVAKAPVVLLAGVEVKLNGQEITVKGPKGELALVAHNAVVLTQEENTI TFGPREGFDKAWAQAGTVRALVNNMVVGVTEGFTKKLTLKGVGYRANVAG NTVNLTLGFSHPVAHELPTGVKAECPSQTEIVLTGTDKQVIGQVAADIRA YRSPEPYKGKGVRYADEVVRTKEAKKK >PBPRA0329 PM1406, putative ribosomal protein S17 MSEQTRIQLGRVISSKMDKSIVVAIERMVKHPMYGKYIKRTTKLHAHDEN NECNLGDTVEVRECRPLSKTKSWTLVRIVEKARV >PBPRA0004 RNPA, Putative RNase P protein component MNKLAFSRELRLLTPEHYKKVFQQAHRAGSPHLTILARPNDLNHPRLGLA VPKKQIKTAPGRNHFKRIVRESFRLKQHDLPANDFVVIAKKSASELSNEE LFKLLDKLWHRLSRLSRG >PBPRA0339 RPLO, putative ribosomal protein L15 MRLNTLSPAPGSKPSAKRVGRGIGSGLGKTCGRGHKGQKSRSGGSVRPGF EGGQMPLKQRLPKFGFTSRKSLVTAEVRLGELAKVEGDVIDLATLKTANL ITKDIKFVKVVLSGEIARTVTVNGLRVTKGAKAAIEAAGGKIEE >PBPRA0258 S3733, putative ribosomal protein L31 MKQGIHPDYSATNARCSCGNTFIFQSTMTKDVNLDVCDKCHPFYTGKQRQ ASSGGRVDKFNKRFGALGSK >PBPRA0198 S4086, putative ribonuclease PH MRPSGRSTSQVRPITITRNFTAHAEGSVLVEFGDTKVICTASVEENVPRW LKGKGQGWVTAEYGMLPRATHTRNRREASSGKQGGRTMEIQRLIARSLRA AVDLEALGEQMITVDCDVIQADGGTRTASITGAMVALVDAVNSMIEKGTL KKSPIKGMVAAVSVGIYKGEAICDLEYLEDSAAETDMNVVMTEEGKMIEI QGTAEGEAFSHEELLAMLALAKDGIADIVTMQKQALES >PBPRA0321 S4411, putative ribosomal protein L4 MELVVKGADALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRSD VSGGGAKPWRQKGTGRARAGTIRSPLWRTGGVTFAARPQDHSQKVNKKMY RGAMKSILSELVRQERLIVVDNFSVEAPKTKELAAKLKELDLSDVLIVTG ELDENLFLAARNLYKVDVRDAATIDPVSLIAFDKIVMTAAAVKQVEEMLA >PBPRA0229 SF3645, putative rRNA methylase, SpoU family MFSKLMFDIALYEPEIAPNTGNIIRLCANCGADLHLIEPLGFDLEEKKLR RAGLDYHDLAHVHRHKDFAAFKEAMAGRRLFACTTKTTNYHTNAQFAEGD VLIFGPETRGLPADFIESLPLEQRLRIPMHPDSRSLNLSNAAAIIGYEAW RQLGFKGSI >PBPRA0314 SO0227, putative ribosomal protein S7 MPRRRVIGQRKILSDPKFGSDLLAKFVNILMVDGKKSTAEKIVYTALDTM TERSGEECLSVFEKALENVRPAVEVKSRRVGGSTYQVPVEVRPVRRNALA MRWLVEAARKRGEKSMAQRLAGEMLDAADNKGTAVKKREDVHRMADANKA FAHYRW >PBPRA0322 SO0233, putative ribosomal protein L23 MITEERILTVLRAPHISEKATMAAESANTIVFKVAITATKREIKAAVEKL FEVEVKSVNTLVAKGKTKSQGARQGRRSDWKKAYVILKEGQDIDFAGSAE >PBPRA0324 SO0235, putative ribosomal protein S19 MPRSLKKGPFIDLHLLKKVEKAVESGDKKPVKTWSRRSMIIPQMIGLTIA VHNGRQHVPVFVSEEMIGHKLGEFAPTRTYRGHAADKKAKKR >PBPRA0325 SO0236, putative ribosomal protein L22 MEAIAKHRFARISPQKARLVADQLRGKPVAQALEILNFSNKKAAELIKKV LESAIANAEHNEGADIDDLNVAKIFVDEGPTMKRIMPRAKGRADRILKRS SHITVVVADR >PBPRA0204 SO4246, putative ribosomal protein L33 MAKGIREKIRLVSSAGTGHFYTTDKNKRNMPGKFEIKKFDPVVRQHVMYK EAKIK >PBPRA0327 STY4365, putative ribosomal protein L16 MLQPKRTKFRKTFKGRNRGLANGTDVSFGTFGLKAVGRGRLTARQIEAAR RAMTRHVKRQGQIWIRVFPDKPITSKPLEVRQGKGKGNVEYWVAQIQPGK VLYEMDGVPEVLAREAFNLAARKLPIKTTFVIKAVM >PBPRA0330 STY4368, putative ribosomal protein L14 MIQMQSTLDAADNSGARRVMCIKVLGGSHRRYAHIGDIIKITVKEAIPRG KVKKGDVLKAVVVRTRKGVRRQDGSVIRFDRNACVLLNDTTEQPIGTRIF GPVTRELRNTKFMKIVSLAPEVL >PBPRA0316 TUFB, putative translation elongation factor TU (EF-Tu-B) MSKEKFERLKPHVNVGTIGHVDHGKTTLTAAICTVLAKVYGGDAKDFASI DNAPEERERGITISTSHVEYDTPARHYAHVDCPGHADYVKNMITGAAQMD GGILVVAATDGPMPQTREHILLGRQVGIPYIIVFMNKCDMVDDEELLELV EMEVRELLSEYDFPGDDCPVIMGSALGALNGEAQWEEKIIELAEALDNYI PEPERAIDLPFILPIEDVFSIQGRGTVVTGRVEQGIVRVGEEVAIIGIKE TTTTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVLAKPGSIT PHTTFTSEIYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM VMPGDNIAMTVTLIAPIAMDEGLRFAIREGGRTVGAGVVATIIA >PBPRA0328 VV0383, putative ribosomal protein L29 MMNAVDLRAKSVEELNAELVSLLREQFNLRMQAATGQLQQTHNLKAVRRD IARVKTVLTEKAGA >PBPRA0342 VV0396, putative ribosomal protein S13 MARIAGINIPDQKHSVIALTAIYGIGKTRSKAVLAEAGIAESVKISELSE EQIDLLREGVAKYTVEGDLRREVSMNIKRLMDLGCYRGIRHRRSLPLRGQ RTKTNARTRKGPRKPIKR >PBPRA0313 VV3032, putative ribosomal protein S12 MATINQLVRKPRVKQVVKSNVPALAACPQKRGVCTRVYTTTPKKPNSALR KVCRVRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRG ALDCAGVNGRKKGRSKYGVKRPKS >PBPRA0188 Y0104, putative tRNA methyltransferase MSRSEFLESRNSHLDTRYLRSQPSPLKQNTKLLMTPDRYQRIHSVLATRQ PDLTVCMEEVHKPNNVSAIIRTADAVGIHKVHAVWPKENMRVLSHTSAGA RNWVELDTHDNMVDAITQLKAQGMQILATNLSDTAIDFRDVDYTKPTAII LGGEKNGITAEALAQADQDIIIPMVGMVQSLNVSVASALILYEAQRQRQN AGMYEREKTLLPDEVVHRILFERGHPVLAKVARRKRLSYPPLDDEGQIVA GDDWWATMQAIEPKKHK >PBPRA0331 Y4000, putative ribosomal protein L24 MAAKIRRNDEVIVLTGKDKGKKGKITKVLATGKVIVEGINLVKKHQKPVP AMGVQGGIVEQEAAIDVSNVAIFNAETGKADRVGFRFEDDKKVRFFKSNS VTIK >PBPRA0346 Y4016, putative ribosomal protein L17 MRHRKSGRQLNRNSSHRKAMFSNMASSLVSHEIIKTTLPKAKELRRVIEP LITLAKTDSVANRRLAFARTRDNAVVAKLFTELGPRFAKRPGGYTRIMKC GFRTGDKAPMAYIELVDRPAQEAASAE