Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Gene type: CDS
Genomic element: chromosome
Number of genes found: 147
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Zymomonas mobilis subsp. mobilis ZM4, ZM4; ATCC 31821 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ZMO0077 | 2-methylthioadenine synthetase | chromosome | CDS | 67152 | 1338 | - | 0.523169 |
NA | ZMO1328 | rRNA methylase | chromosome | CDS | 1343962 | 807 | + | 0.509294 |
NA | ZMO1251 | hypothetical protein | chromosome | CDS | 1268042 | 489 | - | 0.501023 |
NA | ZMO1869 | ribonuclease I | chromosome | CDS | 1920999 | 834 | - | 0.455635 |
NA | ZMO1947 | translational inhibitor protein | chromosome | CDS | 2002476 | 447 | + | 0.530201 |
NA | ZMO0208 | hypothetical protein | chromosome | CDS | 201091 | 609 | - | 0.512315 |
NA | ZMO1246 | ribosomal protein L36 | chromosome | CDS | 1265756 | 126 | + | 0.515873 |
NA | ZMO0807 | conserved hypothetical protein | chromosome | CDS | 810637 | 1296 | - | 0.510802 |
NA | ZMO0999 | putative translation factor | chromosome | CDS | 1013800 | 990 | - | 0.50303 |
NA | ZMO0232 | rRNA methylase | chromosome | CDS | 226497 | 750 | - | 0.518667 |
NA | ZMO0576 | pseudouridylate synthase | chromosome | CDS | 578997 | 399 | - | 0.47619 |
NA | ZMO1214 | DNA and RNA helicase | chromosome | CDS | 1238222 | 1479 | + | 0.50169 |
NA | ZMO1912 | GTPase | chromosome | CDS | 1962063 | 1101 | + | 0.456857 |
NA | ZMO0251 | putative translation initiation inhibitor | chromosome | CDS | 241977 | 459 | + | 0.498911 |
NA | ZMO0265 | hypothetical protein | chromosome | CDS | 265200 | 1431 | - | 0.400419 |
NA | ZMO1417 | DNA and RNA helicase | chromosome | CDS | 1427547 | 1377 | + | 0.529412 |
NA | ZMO1358 | ribosomal protein S20 | chromosome | CDS | 1372804 | 264 | - | 0.484848 |
NA | ZMO1911 | peptidyl-tRNA hydrolase | chromosome | CDS | 1961444 | 570 | + | 0.445614 |
NA | ZMO0555 | transcription terminating nucleic-acid-binding protein | chromosome | CDS | 551084 | 735 | - | 0.491156 |
NA | ZMO1306 | predicted rRNA methylase | chromosome | CDS | 1320469 | 750 | - | 0.482667 |
NA | ZMO1100 | nucleotidyl pyrophosphorylase | chromosome | CDS | 1116033 | 762 | - | 0.481627 |
NA | ZMO0294 | ribosomal protein L28 | chromosome | CDS | 297463 | 177 | - | 0.497175 |
NA | ZMO0193 | ribonuclease | chromosome | CDS | 182954 | 2739 | - | 0.51004 |
NA | ZMO0122 | hypothetical protein | chromosome | CDS | 110510 | 342 | + | 0.421053 |
NA | ZMO0249 | ribosomal protein L33 | chromosome | CDS | 241160 | 168 | + | 0.416667 |
NA | ZMO0630 | hypothetical protein | chromosome | CDS | 623618 | 384 | + | 0.502604 |
NA | ZMO0516 | translation elongation factor | chromosome | CDS | 516466 | 1194 | + | 0.51005 |
NA | ZMO0296 | cytidine and deoxycytidylate deaminase | chromosome | CDS | 298056 | 483 | + | 0.509317 |
NA | ZMO0515 | translation elongation factor | chromosome | CDS | 514290 | 2073 | + | 0.49397 |
NA | ZMO1908 | tmRNA-binding small protein A | chromosome | CDS | 1959293 | 495 | - | 0.458586 |
NA | ZMO0017 | tRNA and rRNA cytosine-C5-methylase | chromosome | CDS | 18995 | 1407 | + | 0.522388 |
NA | ZMO0952 | RNA methyltransferase | chromosome | CDS | 969435 | 459 | - | 0.520697 |
NA | ZMO1320 | tRNA and rRNA cytosine-C5-methylase | chromosome | CDS | 1336326 | 1233 | - | 0.508516 |
NA | ZMO1203 | rRNA methylase | chromosome | CDS | 1226984 | 732 | + | 0.502732 |
NA | ZMO0038 | ribosome-associated protein Y | chromosome | CDS | 39624 | 603 | - | 0.487562 |
NA | ZMO0852 | S-adenosylmethionine:tRNA-ribosyltransferase | chromosome | CDS | 862331 | 1029 | - | 0.472303 |
NA | ZMO1510 | protein chain release factors methylase subunit | chromosome | CDS | 1532945 | 897 | + | 0.462653 |
NA | ZMO1071 | conserved hypothetical protein | chromosome | CDS | 1080932 | 1260 | - | 0.475397 |
NA | ZMO0211 | ribosomal protein L21 | chromosome | CDS | 202294 | 375 | - | 0.522667 |
alaS | ZMO0845 | alanyl-tRNA synthetase | chromosome | CDS | 850820 | 729 | + | 0.458162 |
ansA | ZMO1683 | periplasmic L-asparaginase II | chromosome | CDS | 1727805 | 1101 | + | 0.482289 |
argS | ZMO0843 | arginyl-tRNA synthetase | chromosome | CDS | 847823 | 1497 | + | 0.492986 |
aspS | ZMO0715 | aspartyl-tRNA synthetase | chromosome | CDS | 712396 | 1791 | + | 0.498604 |
bcbE | ZMO1300 | capsular polysaccharide biosynthesis protein | chromosome | CDS | 1315650 | 723 | + | 0.356846 |
cca | ZMO1056 | tRNA nucleotidyltransferase | chromosome | CDS | 1070974 | 1221 | - | 0.489762 |
cysS | ZMO0186 | cysteinyl-tRNA synthetase | chromosome | CDS | 171805 | 1551 | + | 0.461638 |
defA | ZMO0813 | polypeptide deformylase | chromosome | CDS | 814974 | 534 | + | 0.455056 |
dus | ZMO1127 | tRNA-dihydrouridine synthase | chromosome | CDS | 1143569 | 1026 | - | 0.479532 |
efp | ZMO0328 | translation elongation factor P | chromosome | CDS | 326596 | 564 | + | 0.485816 |
fmt | ZMO0811 | methionyl-tRNA formyltransferase | chromosome | CDS | 813303 | 906 | - | 0.51766 |
frr | ZMO1153 | ribosome recycling factor | chromosome | CDS | 1170790 | 558 | - | 0.478495 |
ftsJ | ZMO0402 | 23S rRNA methylase | chromosome | CDS | 402603 | 666 | - | 0.478979 |
gatA | ZMO0783 | glutamyl-tRNA(gln) amidotransferase subunit A | chromosome | CDS | 779600 | 1479 | - | 0.523327 |
gatB | ZMO0782 | glutamyl-tRNA(gln) amidotransferase subunit B | chromosome | CDS | 778126 | 1536 | - | 0.492188 |
gatC | ZMO0784 | glutamyl-tRNA(gln) amidotransferase subunit C | chromosome | CDS | 781078 | 291 | - | 0.515464 |
gid | ZMO0691 | NAD(FAD)-utilizing enzyme | chromosome | CDS | 685680 | 1341 | - | 0.457122 |
gltX | ZMO1964 | glutamyl-and glutaminyl-tRNA synthetase | chromosome | CDS | 2023560 | 1446 | - | 0.482711 |
gltX | ZMO0900 | glutamyl-tRNA synthetase | chromosome | CDS | 907592 | 1335 | + | 0.471161 |
glyQ | ZMO1446 | glycyl-tRNA synthetase alpha subunit | chromosome | CDS | 1463596 | 873 | - | 0.487972 |
glyS | ZMO1444 | glycyl-tRNA synthetase beta subunit | chromosome | CDS | 1461544 | 2049 | - | 0.498292 |
gshB | ZMO1913 | glutathione synthase | chromosome | CDS | 1963494 | 951 | + | 0.419558 |
helY | ZMO0219 | ATP-dependent helicase | chromosome | CDS | 210925 | 2832 | + | 0.47952 |
hisS | ZMO1508 | histidyl-tRNA synthetase | chromosome | CDS | 1530657 | 147 | + | 0.387755 |
ileS | ZMO0323 | isoleucyl-tRNA synthetase | chromosome | CDS | 319798 | 2826 | + | 0.488677 |
infA | ZMO1014 | translation initiation factor 1 | chromosome | CDS | 1030663 | 264 | - | 0.44697 |
infB | ZMO0554 | translation initiation factor 2 | chromosome | CDS | 548111 | 2970 | - | 0.52862 |
infC | ZMO1906 | translation initiation factor 3 | chromosome | CDS | 1955905 | 540 | - | 0.466667 |
ksgA | ZMO1314 | dimethyladenosine transferase | chromosome | CDS | 1330372 | 837 | + | 0.505376 |
leuS | ZMO1435 | leucyl-tRNA synthetase | chromosome | CDS | 1450755 | 2541 | - | 0.498229 |
lysS | ZMO0890 | lysyl-tRNA synthetase | chromosome | CDS | 897157 | 1596 | - | 0.451128 |
map | ZMO1348 | methionine aminopeptidase | chromosome | CDS | 1362690 | 831 | - | 0.500602 |
metG | ZMO1092 | methionyl-tRNA synthetase | chromosome | CDS | 1102034 | 1566 | + | 0.465517 |
miaA | ZMO1138 | Isopentenyl-diphosphate:tRNAisopentenyltransfera se | chromosome | CDS | 1154660 | 939 | + | 0.436635 |
pheS | ZMO1514 | phenylalanyl-tRNA synthetase alpha subunit | chromosome | CDS | 1539517 | 1101 | - | 0.497729 |
pnp | ZMO0549 | polyribonucleotide nucleotidyltransferase | chromosome | CDS | 543379 | 2247 | - | 0.511348 |
prfA | ZMO1509 | protein chain release factor A | chromosome | CDS | 1531912 | 1077 | + | 0.493036 |
prfC | ZMO0743 | peptide chain release factor RF-3 | chromosome | CDS | 740230 | 1590 | + | 0.484277 |
prmA | ZMO0570 | ribosomal protein L11 methylase | chromosome | CDS | 569630 | 948 | + | 0.49789 |
proS | ZMO0460 | prolyl-tRNA synthetase | chromosome | CDS | 453475 | 1128 | - | 0.489362 |
rbfA | ZMO0553 | ribosome-binding factor A | chromosome | CDS | 547539 | 426 | - | 0.462441 |
rbsR | ZMO1226 | ribosomal protein S18 | chromosome | CDS | 1248814 | 225 | + | 0.524444 |
rf-2 | ZMO0506 | protein chain release factor B | chromosome | CDS | 506485 | 420 | - | 0.411905 |
rf-2 | ZMO0198 | protein chain release factor B | chromosome | CDS | 190144 | 1128 | + | 0.514184 |
rimM | ZMO1077 | 16S rRNA processing protein | chromosome | CDS | 1085249 | 492 | + | 0.489837 |
rluC | ZMO0505 | pseudouridylate synthase | chromosome | CDS | 505576 | 660 | + | 0.463636 |
rluC | ZMO0439 | pseudouridylate synthase | chromosome | CDS | 434275 | 1125 | + | 0.516444 |
rluD | ZMO0750 | pseudouridine synthase D large subunit | chromosome | CDS | 747183 | 954 | - | 0.498952 |
rnd | ZMO0714 | ribonuclease D | chromosome | CDS | 711122 | 1173 | - | 0.483376 |
rnd | ZMO0278 | ribonuclease D 3'-5' exonuclease | chromosome | CDS | 281732 | 618 | - | 0.480583 |
rnpA | ZMO1625 | ribonuclease P protein component | chromosome | CDS | 1666996 | 465 | + | 0.539785 |
rph | ZMO0014 | RNase PH | chromosome | CDS | 16367 | 714 | - | 0.570028 |
rplA | ZMO0726 | ribosomal protein L1 | chromosome | CDS | 723075 | 702 | + | 0.519943 |
rplB | ZMO0520 | ribosomal protein L2 | chromosome | CDS | 520054 | 837 | + | 0.525687 |
rplC | ZMO0517 | ribosomal protein L3 | chromosome | CDS | 518391 | 729 | + | 0.521262 |
rplD | ZMO0518 | ribosomal protein L4 | chromosome | CDS | 519122 | 624 | + | 0.504808 |
rplE | ZMO0528 | ribosomal protein L5 | chromosome | CDS | 523958 | 579 | + | 0.483592 |
rplF | ZMO0531 | ribosomal protein L6P/L9E | chromosome | CDS | 525294 | 534 | + | 0.488764 |
rplI | ZMO1227 | ribosomal protein L9 | chromosome | CDS | 1249053 | 630 | + | 0.488889 |
rplJ | ZMO0727 | ribosomal protein L10 | chromosome | CDS | 724041 | 516 | + | 0.546512 |
rplK | ZMO0725 | ribosomal protein L11 | chromosome | CDS | 722639 | 432 | + | 0.497685 |
rplL | ZMO0728 | ribosomal protein L7/L12 | chromosome | CDS | 724614 | 372 | + | 0.513441 |
rplM | ZMO0884 | ribosomal protein L13 | chromosome | CDS | 892679 | 480 | - | 0.485417 |
rplN | ZMO0526 | ribosomal protein L14 | chromosome | CDS | 523337 | 312 | + | 0.519231 |
rplO | ZMO0536 | ribosomal protein L15 | chromosome | CDS | 527220 | 492 | + | 0.479675 |
rplP | ZMO0523 | ribosomal protein L16/L10E | chromosome | CDS | 522309 | 432 | + | 0.534722 |
rplQ | ZMO0542 | ribosomal protein L17 | chromosome | CDS | 532520 | 423 | + | 0.501182 |
rplR | ZMO0532 | ribosomal protein L18 | chromosome | CDS | 525827 | 357 | + | 0.509804 |
rplS | ZMO1079 | ribosomal protein L19 | chromosome | CDS | 1086483 | 375 | + | 0.477333 |
rplT | ZMO1515 | ribosomal protein L20 | chromosome | CDS | 1540906 | 378 | - | 0.507937 |
rplV | ZMO0521 | ribosomal protein L22 | chromosome | CDS | 521168 | 381 | + | 0.519685 |
rplW | ZMO0519 | ribosomal protein L23 | chromosome | CDS | 519738 | 312 | + | 0.487179 |
rplX | ZMO0527 | ribosomal protein L24 | chromosome | CDS | 523648 | 318 | + | 0.496855 |
rplY | ZMO1910 | ribosomal protein L25 | chromosome | CDS | 1960707 | 663 | + | 0.458522 |
rpmA | ZMO0209 | ribosomal protein L27 | chromosome | CDS | 201892 | 270 | - | 0.492593 |
rpmC | ZMO0524 | ribosomal protein L29 | chromosome | CDS | 522743 | 204 | + | 0.539216 |
rpmD | ZMO0534 | ribosomal protein L30/L7E | chromosome | CDS | 526893 | 177 | + | 0.485876 |
rpmE | ZMO1145 | ribosomal protein L31 | chromosome | CDS | 1162262 | 228 | - | 0.482456 |
rpmI | ZMO1516 | ribosomal protein L35 | chromosome | CDS | 1541297 | 204 | - | 0.480392 |
rpsA | ZMO1798 | ribosomal protein S1 | chromosome | CDS | 1840667 | 1707 | + | 0.52314 |
rpsB | ZMO1156 | ribosomal protein S2 | chromosome | CDS | 1173243 | 753 | - | 0.515272 |
rpsC | ZMO0522 | ribosomal protein S3 | chromosome | CDS | 521550 | 696 | + | 0.517241 |
rpsD | ZMO1366 | ribosomal protein S4 | chromosome | CDS | 1381072 | 615 | + | 0.487805 |
rpsE | ZMO0533 | ribosomal protein S5 | chromosome | CDS | 526184 | 702 | + | 0.539886 |
rpsF | ZMO1225 | ribosomal protein S6 | chromosome | CDS | 1248419 | 375 | + | 0.536 |
rpsG | ZMO0514 | ribosomal protein S7 | chromosome | CDS | 513761 | 471 | + | 0.496815 |
rpsH | ZMO0530 | ribosomal protein S8 | chromosome | CDS | 524899 | 396 | + | 0.517677 |
rpsI | ZMO0883 | ribosomal protein S9 | chromosome | CDS | 892131 | 549 | - | 0.542805 |
rpsK | ZMO0540 | ribosomal protein S11 | chromosome | CDS | 530857 | 390 | + | 0.515385 |
rpsM | ZMO0539 | ribosomal protein S13 | chromosome | CDS | 530403 | 390 | + | 0.502564 |
rpsN | ZMO0529 | ribosomal protein S14 | chromosome | CDS | 524580 | 306 | + | 0.496732 |
rpsO | ZMO0550 | ribosomal protein S15P | chromosome | CDS | 545739 | 270 | - | 0.477778 |
rpsP | ZMO1076 | ribosomal protein S16 | chromosome | CDS | 1084814 | 432 | + | 0.539352 |
rpsQ | ZMO0525 | ribosomal protein S17 | chromosome | CDS | 522958 | 252 | + | 0.460317 |
rpsU | ZMO1713 | ribosomal protein S21 | chromosome | CDS | 1761071 | 207 | - | 0.507246 |
rulA | ZMO0810 | tRNA pseudouridine synthase A | chromosome | CDS | 812569 | 738 | - | 0.525745 |
rulB | ZMO0551 | tRNA pseudouridine synthase B | chromosome | CDS | 546026 | 912 | - | 0.494518 |
sacC | ZMO0375 | extracellular sucrase | chromosome | CDS | 379075 | 1242 | + | 0.471014 |
serS | ZMO0986 | seryl-tRNA synthetase | chromosome | CDS | 1004681 | 1278 | - | 0.49687 |
tgt | ZMO0363 | tRNA guanine transglycosylase | chromosome | CDS | 364874 | 1200 | + | 0.503333 |
thrS | ZMO0765 | threonyl-tRNA synthetase | chromosome | CDS | 756996 | 1980 | + | 0.489394 |
trmD | ZMO1078 | tRNA-(guanine-N1)-methyltransferase | chromosome | CDS | 1085737 | 750 | + | 0.497333 |
trmU | ZMO0769 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | chromosome | CDS | 764537 | 1152 | + | 0.472222 |
trpS | ZMO1640 | tryptophanyl-tRNA synthase | chromosome | CDS | 1682076 | 1023 | + | 0.475073 |
tsf | ZMO1155 | translation elongation factor Ts | chromosome | CDS | 1172212 | 924 | - | 0.517316 |
tyrS | ZMO1643 | tyrosyl-tRNA synthetase | chromosome | CDS | 1685213 | 1230 | + | 0.482114 |
valS | ZMO1878 | valyl-tRNA synthetase | chromosome | CDS | 1927522 | 1866 | + | 0.501072 |
ygcA | ZMO1179 | putative RNA methyltransferase | chromosome | CDS | 1197181 | 1194 | - | 0.456449 |