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Gene list

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COG category: Translation, ribosomal structure and biogenesis
Gene type: CDS
Genomic element: chromosome II

Number of genes found: 20

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# Vibrio fischeri ES114, ES114

>VFA0365 translation initiation inhibitor
MDIQRINPSEKWSDVTVFNKMAHFVEVAEDETADMLGQTEQVFAQAEAML
ASVNSDKSRLVSVTIYVTDFANLAVFNEAWIKWLPEGCAPSRACLKVELA
DPNYLVEIAFVAAVK
>VFA1128 hypothetical protein
MNKPASPIESAKNNATQSIAHSSAMALSDATDNLRNLSSIGTTAIGVALS
QFIETGDSKYLDGIDKAGEVVTQAINNFSEIGTKVKENIE
>VFA0553 ATP-dependent RNA helicase
MTGYLSIILEIGVQLLQFKDLGLDNRLLKNLAHQNIKTPTEIQRKAVPVA
IAGKDVLASSKTGSGKTLAFVLPMLHKSLKTKSFSKNDPRAVILAPTREL
AKQVYSHLRAMLGGLTYDATLITGGENFNDQVNALRKHPKFIVATPGRLA
DHLEHQSLYLDGLETLILDEADRMLDLGFAEHLQKIHKAASHRRRQTLMF
SATLDHDAVNKFAGNMLDNPKRISVGLSNDEHKDITQRFYLCDHLDHKQA
ILNKIIETEDYFQIMIFTATRSDTDRLTKLLNEENLKAVALSGDMNQTAR
NNIMSQFERRVHKILVTTDVASRGLDLTSVTHVINFDMPKHMEEYVHRVG
RTGRAGKKGTAISLVGPKDWESFKRVETFLQQDLSFSVFEELKGKFKGLK
PKHKRTFVKKGDPKKFKAKGNQNKPKAPKKRDNSFHTNVAVGDQVFMPKK
KPKQIVVDDE
>VFA0133 hypothetical protein
MKKYFLLLALFSGVCFAKPQVYFSADALSNSNAYSLQSGFYFPVNQELDF
GYELDFTKWNQDVHSFGINIKPAFRKQQFYLAPIVGMHYFNRDIDYSYSL
GAEIGYDFERVTIRAGYKDVDEEFHDNDAFYVGVAVRFD
>VFA0219 tungstate-binding protein precursor
MKAKIIVVLAMITILFGLYGLAGSLSMFAPQNIIKPKEENKIKVWQLKEN
VNARDEINRRLVSLVLLPESEANKLSFSEDVPINWNRGTIYRHDLKKGDY
ISMEDFITPEEDNYIEYVIAPNRVPFPLPIDSPDIIGGVIGNGSFVDVLA
LTKSDENRNSNRATKKTLSITPIFTSIKVLQVKRTVIPETRIEPAKEGIV
LILELTRSQAVELIVAKEAAKIEVHKSIGNYSIEDLKANAGDVLDDFRAV
TEYRANKVTIK
>VFA0162 N(6)-hydroxylysine O-acetyltransferase
MCKYTTLIFNIEPSPAITFTVSNQDLKDSQLIEKSLQEIDHIFSTNSIIS
EIYFESEIPSQLVQSLPSLYQNRLSREGFYQQVEPWHLHSPSTLFPWREV
QTLLQYRHHPLRPEMPKGRVYQRHDHNIDAEISFRVFDLEKDLERFTAWM
NDPRVANFWEQAWSYEKLAEFIKERLDDPHIIPLIGEFNGEPFGYVEAYW
VSEDRLSPYYDVQPYDRGIHLLVGEQAFRGPEYFNCWMRAISHYLFIDDV
RTQRIVLEPRADNHRLFNRIQEVGYKKCFEFNFPHKRSALMMIKRQSFFS
EQW
>VFA0154 ATP-dependent RNA helicase DbpA
MSQTSFSSLDLHPSLLQNLETLGYNEMTPIQAQSLPFMLKGKDVIAQGKT
GSGKTAAFGLGLLANLNVKRFRVQSLVLCPTRELADQVAKEIRKLARAIH
NIKVLTLCGGVPFGPQIGSLEHGAHIIVGTPGRVEEHLRKGYLNLDNLNT
FVLDEADRMLEMGFQDAIDAVLDHAPVKRQNLLFSATFPPQIKSIADRIM
NDPIMTKAEETVENTSINQHFFKVGDFEDRLEALQILLLKHQPESTVIFC
NTKRVTQEVADELRHYDFSVTALHGDLEQRDRDKALVRFANKSTSILVAT
DVAARGLDIESLDAVVNFELSRDPEVHVHRIGRTGRAGNKGIALSLFNEK
EMHNIAQIEEYMNIDIRDEALPSTDYLKEPAYYAEMVTLWIDGGKKNKLR
PGDILGALTGKDGIEGKMVGKINVFDFHAYVAVHNTVAKAALKKLESGKM
KGRSFRVSRMRG
>VFA0151 ATP-dependent RNA helicase
MGFTSLGLSAPILKAVEEQGYSTPSPIQLQAIPAVIEGKDVMAAAQTGTG
KTAGFTLPLLERLSNGPKRKFNQVRALVLTPTRELAAQVHESVEKYSKNL
PLTSDVVFGGVKVNPQMQRLRRGVDVLVATPGRLLDLANQNAIKFDQLEI
LVLDEADRMLDMGFIHDIKKILAKLPKNRQNLLFSATFSDEIRQLAKGLV
KDPVEISVAKRNTTAETVEQSVYVMDKGRKPKVLTKLIKDNDWKQVLVFS
KTKHGANRLAKTLEEKGVSAAAIHGNKSQGARTKALANFKSGQVRVLVAT
DIAARGLDIEQLPQVINVDLPKVPEDYVHRIGRTGRAGATGKAISFVSED
EAKELFAIERLIQKVLPRHVLEGFEPVNKVPESKLDTRPIKPKKPKKPKA
PRVEHKDGQRSGENRNGNKQGAKQGQKPATKRTPTNNPSGKKEGTDSDKK
KRPFSGKPKTKGTGENRGNGSNFGKSKSTPKSDVKPRRQGPRPARKPKAN
>VFA0573 protein translation initiation factor 1 (IF-1) (or SUI1)
MSLVYSTDVGRIKQEEPKAERPKGDGIVRIQRETKGRKGKGVCVVTGLDM
EDTQLKLLAAQLKKVCGCGGSVKDGDIEIQGDNREKIKDFLTKQGHTVKL
AGG
>VFA1155 peptidyl-tRNA hydrolase
MLTISNQVQLADWEIELTAIRAQGAGGQNVNKVSSAIHLRFDISRSTLPA
FYKERLLKMRDHRITKEGIIIIKAQQFRTQEKNREDALDRLKQLIQSATE
TQKARKETKPTRSSQHKRMDKKSQRGQTKSMRKKVDY
>VFA0385 spermidine N1-acetyltransferase
MENNMDNEIRLRALEQTDLRFIHQLNNNRSIMSYWFEEPYESYYELEDLF
RKHIHDSNERRFIAENAQQQSIGLVELVEINSIHRNAEFQIIIAPDFQGC
GYARGLINKALNYAFTILNLHKVYLHVAVNNEKAIHLYEKCGFVEEGHLI
KEIFVNGEYSDIKRMYILQDTYIKNRNN
>VFA0870 TcpD, toxin co-regulated pilus biosynthesis protein
MVILDNIKNKQNRIVVIISFFLISLILVLSFIFFNKYKENEKIRKFQEQK
RVEETNDRDMYISTLDNFNSSFSIQNFREIYDDLYRDKVFFHPLGWIQNE
VYCNGNECNIKYIRSEPDAFNYVVLTKNNLDYPPAFNKNELNYESVFFDF
SENKKILKDKVNYANCTDILSKAYRFDTMINSIGSNLEVLSPSNVFLINK
EYEWMEYKNLMQGQLILNTSEFQSLDLIDDFFNGDFVTYGEMNLRNNDAT
IYFNYLCLN
>VFA0750 ribosomal-protein-S5-alanine acetyltransferase
MDVSFEFEHYQVRLIKSSDAVTIANYFMRNRHHLAPWEPKRSHAFFTPEG
WKQRLLQLVELHKHNLAFYFVVVDKNEHKIIGTVSYSNITRFPFHAGHVG
YSLDSEYQGKGIMRRAVNVTIDWMFKAQNLHRIMAAYIPRNEKSAKVLAA
LGFVKEGEAKKYLYINGAWEDHILTSKINDDWKPE
>VFA0485 ribosomal large subunit pseudouridine synthase A
MPISNPCFTSFTQPIDGYTLPEKFTFPFCYEPHPLCELAAEELQRHLEAQ
QEWHHNFGLSGDKSNAIGKMFGVLLVKAPTGEIGYLSAFSGKIADSNHLP
YFVPPVFDMLEEDGFFKTELAEITEINATIKQLEANPQLSHLATSIQSET
TASLQQIEIQRQVMIEGRKSRKAQRAAAEITAQDGTEKSAEELEQLKVVL
GKESVKEKNTLRDIKLIWDEKINALQCQLNELEDALNELKTKRKNLSNGL
QKKLFQQYKFLNTHGIEKDLNDIFKDTPNQIPPAGSGECAAPKLLQYAFA
HGFTPLALAEFWWGIAPKSEIRQHKKFYASCQSKCQPILGHMLDGIEMDE
NPLLINPAEGKDLEIVYEDEFMVVVNKPADFLSVPGKNIHDSVYARIQQR
YPDATGGLIIHRLDMATSGLLVLGLTPKAHKRLQQQFINRTVEKRYTALL
DGVLEQDEGLITLPMRGDLYDRPRQLVCFEHGKPAETTYQVIERKENKTK
VYLYPKTGRTHQLRVHCAHYLGLNMPITGDGLYGKKANRLHLHAGYLSLI
HPITKEPMEFNVEAEF
>VFA0484 hypothetical protein
MSKRNFNVMCNNTLTHKFIRLSGDIDGITLPQHFTFPYYYTPHPLARLAM
DDLQLYLDTQNEWQHDFTVNGKMFGVLVVKNQDGEIGYLASFAAQEADKQ
PELSHTPDFFVDAIFDKTNHDSLCAQQRTELQHLKSHIHQLKNDPEFIEL
KEKLSANQQQAEHEITQFQQAMADSKKQRKQQRAEAESNTLSPLTPDDLS
ALISELGNQSSREKRAFKQLKQDWQNTLLTLSTQLKENEYRISQAELTYD
NLVQQRHIDTLKATQFLNSNGVIKSLFDLFKRSDSDQLKQEPIANSSEQN
CPKLLQTAFTLGYTPLALGEFWWGASPYDQIRQHKNLYPVCQSKCFEILE
HMLEGISTDGSPLEQTPSYGKELEIVYEDDVLVIVNKPVEFLSVSGKYIS
DSVHARIQARYPNATGPLIVHRLDMSTSGLLVLTLTAESNKQVQKQFIER
TVEKRYTALLEGNIETDNGTINLPLTGDMEDRPRQMVNHKSGRKAETHYQ
VIAQEGKRTKVHLYPHTGRTHQLRVHCAHQAGLNTPIVGDDLYGFKADRL
HLHAGYLKFKHPTTNETVEFSCPEDF
>VFA0374 ATP-dependent RNA helicase
MVCYNQRQLLSIHRFIMSFASLGLTKQILTTVAELGFKEATPIQEQAIPL
VLQGHDVLAGAQTGTGKTAAFGLPLIQRLIESPIERHEESKVVRSLILTP
TRELAQQVFDSLVSYTQNTELKVVVAYGGTSINVQKENLLGGADILIATP
GRLLDHLHIKTITLNQAEYLVLDEADRMLDMGFIPDIKKILRKMPDERQT
LFFSATFSKKVREIAYYMLNKPKEVQVTPTNSTAETVEQMVYPVDKHRKS
ELLAYLIGSRNWQQVLVFTKTKQGSDELVKELKKDGIKAASINGDKSQGA
RLRALEEFKTGKVRALIATDVAARGLDIEQLECVINYELPFKAEDYVHRI
GRTGRAGHTGKAISLMSMDEEYLLKAIETLLDTRLPQEWLQGYEPDPNAP
LREDRPRQSRGRSSDKRKMKAKLKIHANRGKNKR
>VFA0384 ATP-dependent RNA helicase
MSESITEFRQLALDESILSALDDMGFVAPTPIQAASIPLLLEGRDALGKA
QTGTGKTAAFSLPLLNKINLKQHNPQAIIMAPTRELAIQVAAEVKNLGRN
IKGLKVLEIYGGASIVDQMRALSRGAHIIVGTPGRVKDLLNRDRLNLGEV
HTFILDEADEMLKMGFVDDVTWILEKAPDTAQRILFSATMPPMVKTIVDR
YLREPARVDVAGTNHTVDKVEQNFWVVKGVEKDEAMSRLLETEETDASIV
FVRTRQDTERLADWLSARGFKAAALHGDIPQSQRERTVDNIKNGVIDILV
ATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVR
TNQMRMLRTIERVTKSTMEEIQLPHRDQVAECRLAALAAELQADKEFVAL
DAFTDLINKLQETLEIDATTIAAMLLKRQQGKRPLFYKGPDPMIAAMERA
KNRRSDRGERGERGGRGDRPERGERRQYNNDDFDTYQLEVGREQGVQVKD
IVGALANELGFTKGSIGAIKLAPGHTYVQLPKKMSADVAGKLKKLRIRQN
ETKAVVVEGVDLTIERRPRTGGGRDDNRGGNGRGGYRGNRENREGGRGGE
RRFDRNKGGDHRGSHRGERAPGGRGRGRSERSEG
>VFA0629 hypothetical protein
MELMIKKLAKESGLVIPKPKAKAEFKIKGMGMRRNEEALIYRIPSHSTKA
QYYEKGVTINEFEKAHQRLVNTGFFTRTWFNENLKACAKEGGCNFTTIGG
VFEILGIAEYSQKATYKYLT
>VFA0002 translation initiation inhibitor
MIERQETKQRMSRIVKHNGTIYLCGQVCADATKDITEQTQTMLDKVDLLL
EQAGSSREHMLSATIYIKDMKDFAEMNAVWDAWVPEGHAPARACVEASMA
REALLVEISVIAAEK
>VFA0635 hypothetical protein
MRNKLRIILIFTALISVLSGVARAEKHKDFGDYTTYVVTQNDGVIYKQAN
VKLDGIFAELAFHSRSNSENVFAFVNKQKVQLIVDGIIMDNKLDHNEVTM
IKNAHNIAVIHGNRTYLISTKGSGASMIYITDFPMIEREDAKNKIPIIIS
KPRVSNE