Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Gene type: CDS
Genomic element: chromosome 2
Number of genes found: 29
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Vibrio parahaemolyticus RIMD 2210633, O3:K6 >gid:500825 VPA0001 conserved hypothetical protein MTADEKILIKAPRSHKDGHLFEVHESSADWVEQYQHFKGVTKSILELLNL ISLRGFSSKDGLVSTTEIVEATDGQLTRAALQQRLRAAVNIGLFTQTPVR FEEGLAGKTMLHKFVNPNQLISVLGATSLVTDKVRQNEKQKRSKALAQTQ VNKRLLNEHGLNTPPMMKDEADQFVVSPTNWAGIIDQALAPPRTRKSYQK SMVSISGTKAVIETRSSKNIMTVDDLMTLFALFTLTVQYHDHHKDQYQMD AAHVPNKTPLYITDILSLRGKKDSGPARDSIRDSIDRIEFTDFQLHELTG RWLSENMPEGFKSDRFRFLARTITASEEAPVEGSDGEIRIKPNLYILVWE PSFYEELLTRDYFFLFPPEILKQHTLVFQLYSFFRSRMVRRHTDCMLLSE LNQKLARNIEWRRFSMDLIRELKRLSDGKGTDDLFVVNLWGYHLTIETMI ENDKVMDYQIDIKCDVEEVLRYSRARTTNAGKRNMAPTLPNPLRNEMVTR QQLEALSGIIDGEFEPIQRKTPSPRGNLGRRVKQRKHLVEINADEITITL SKYTSPEALERSITALSAMTGHSYASIKEECSEYIEKLDWLRVGDEPIPY ETLSKTVELFNTQNEVKHLTIERLIAGLAVRRKVCRQVFDGHMDEMVFRA LDEMAI >gid:500886 VPA0062 putative ribosomal large chain pseudouridine synthase A MHSPEHCFTRFTADTSDYELPTQFTFPFYYTPHPLCVLAAKQLQQHLLAQ TDFEHDFGLVNEETGRGKMFGVLLVKSPQGELGFLSAFSGKIADQNLIPG FVPPVYDMLTDEGFFRAETDAINAANAEYKTCAANPELADLKAQIQADRA AYQQEEQTQRQVMIDGRAARKRQRQQGEQTLNADDLKILLDELGKQSVAE KNVLKYLKQAWDEKLAIKEARLAELEQQLAHLKEQRKTLSNALQHKLHKQ YRFLNSHGEARDLVDIFADTTNPIPPAGAGECAAPKLLQYAFKHGFKPLA LAEFWWGVSPKSEVRQHKKFYPSCNSKCQPILGHMMQGLDVEPNPLAENW AEDKELEIIYQDDAMVVVNKPSGLLSVPGKTIKDSAYTRIQAMFPDVEGP FVIHRLDMATSGILVFALTKRANKSLQKQFMARGVQKRYMALLEGVLNEP EGEISLPMRGDPDDRPRQLVCFEHGKHAETYWQLIDVKDGRSKVYMYPKT GRTHQLRVHSAHHMGLNMPMVGDGLYGEKANRLHLHAEMLELDHPYSKER MVFRAECEF >gid:500918 VPA0094 hypothetical protein MNLFKDLPNNLDEEVFEDLLTHKNLRIERIVSTGQTSPESGWYDQEEHEW VLVLKGAGELTFESGVVQRLDAGEHVTIPAHTKHKVSWTDPTQETIWLAV FYQ >gid:500950 VPA0126 putative acetyltransferase MSTLISTPRTKMSPIRAEDWALFQRLHIEPSVISLCFDKPDERVLRDKFE SRLASWTPECDHWLCLTIFDANTQQPIGITGFVLEEDKAEVGYLLLPEFH GQQFGTETLNALLHWAETTHDILRFSATVTEGNVASERVLTKCGFELSQV IPDAYQIGGKHYADKIYSRQK >gid:501005 VPA0173 ribosomal protein S6 modification protein MRIAILSRNENLYSTMRLKQAGEERGHQIDVIDTLHCYMDITSNNPMIRY KGEELPQYDAVIPRIGASITFYGTAVVRQFEMMGTFCVNESVAISRSRDK LRSLQLLSRKGIGLPRTGFAHHPDNIQDVIKNVGGAPLVIKLLEGTQGIG VVLAETNKAAESVIEAFMGLKANIMVQEFIEEAKGADIRCFVVGNKVIAA MKRQAKEGEFRSNLHRGGSAQLVRLSKEERATAVNAAKVMGLNLCGVDIL QSKNGPVVMEVNSSPGLEGIELATGKDVAGMIFDFIEKNAKPNSNRTRGK G >gid:501127 VPA0294 hypothetical protein MTFRQEYNGCKSFVCPNCGVPDLSLYSRSNRLGYDAWHCPECGAYPPVLI NEPILALAHQLQQQTFELKLLPHCECRLPAWQRYGRTAVGSPRVKCRCCQ KTATLPNPIKESRTLQPLLDALLAEVSPKDLQYKLGLNHRRFSQSLERLA SMLDTFSRLYERHLSFSNIQTRSFVQVARSGFRHHGREQRAAHIWTLCSA DAQTGYVLLLSDNAWFPQTEMSEHVIPQPLWEQSRYQLTQQEEMPNESDI FLQAQRTYDKILSRSQFDQLAYCDGSHAKSKEVLLTRPVFAAHAHMQNLA KYFANKVPKRFVLEHESFLRGAAITAFTSAIKRGTTQLYYCHIGQSEENL SLNHAKQKMSWWDETWRRGNIQNQYGSWQVGMGWLTQKSARPSESIDELI PAHPNWNSEFWNRYTQWLPPSYAAHLSLQRIKQWQAIYRFLYNYSAMQSP PKVGVDEIDLSRVDSIAESINRSVNAPVHL >gid:501160 VPA0328 putative translation elongation factor G MLINKIRNIAFVGQTGTGKTTLIEKLLFTCDATHHLGSVEKGDTVTDFDP QSIQYQHSIEATPVALRWNKHRLNIIDTPGQNELLGRTISVFPAVETSAL VIDPQTPLNQTSDRLFTFAKEQQKCQMIIINKLDNHGNQLERLLENIVEH FGDHCLPINLPSADGESVVDCYFEPELGRETLLATVDEAHETLIDQVIEV DEELMELYLEQGSELTAEQLHDPFEEALRTGHVIPVCFVSAQTGAGVELL LRTLAEIMPMPNEGNPPLLEKNGKKIKVNCETLEHTVAHVYKVSVDPYMG KLAYLRVYQGEINAGSQLYIGESNKAFKVGHLYQLQGKDRTEIPRALAGD FCVLAKVDDLEFDSIVHDSHEEDGVQLKTLDLPDSMYSLCLKPLKRGDEQ KLGDVLNKIASEDPSLRIEHRARTNETIISGQGEFHLKVALEKMANVYKL DVETCQPSVEYFETITKPAEGHYRHKKQSGGAGQFGEVQLKVRPLERGAG FKFINKVVGGAIPTALIPAVEKGILQALEEGAISGNPIKDVEVTVYDGKY HSVDSKEIAFVIAGKKAFLDAINNADPIVLEPIVQMELHIPTANVGDVSG DLSGNRGLIEGTEPIDSSFTLLRAKSPVNELQDYARRLRSITGGEGSFSM TLSHYEPAPPAVQKQVCQGSTQQG >gid:501201 VPA0368 tyrosyl-tRNA synthetase MTTPLLQDLQDRGLIAQASDLEEIQTLLSQPQTVYCGFDPTAGSLHIGHL VPLIMLKRFQDAGHQAVALIGGATGMIGDPSFKATERSLNSAEIVSGWVN DLSNQIQQLMNHQLSKPMIMVNNADWMRAINVIDFFRDVGKHFSINTMIN RESVKQRLQRPDQGISFTEFSYALLQSYDFAELNRQYGCRLQIGGNDQWG NIVSGIDLTRRQNGEQVFGLTLPLITKSDGTKFGKTEGGAVWLDPSKTSP YAFYQFWLGAEDADVYHFLRYYTFLSCEEIASIEAQDQASQGKPQAQRIL AEEMTRFVHGEEGLASAERITQALFSGNVQQLSLGELKQLELDGLPSIES AQQDLVELLIESGLASSKRVAREHISNNAISVNGEKVSADNPSLSFPLFD QYWLLQRGKKHFCLVKRAA >gid:501207 VPA0374 periplasmic L-asparaginase II MTKNLFRLSTITLGLCLSSLSFAQSDLPNIKILATGGTIAGAGQSATESN YTAGKVGVESLISAVPSMTNIADISGEQVVSIGSQDMNDEVWLKLAKRVN ELLAQDDVDGIVITHGTDTLEETAYFLDLTVKSDKPVVIVGAMRPSTAMS ADGPVNLYNAVVTATDEDSKGRGVLVAMNDTIFDARDVTKTNTTSVSTFQ SPNFGPLGYIHNSDAKYQRSPERKHTTETPFDVSKLNTLPKVGIVYNYAN ASSLPVKALVDAKFDGIVSAGVGNGNLYHTVFDELEKASKDGIVVVRSSR TPTGSTTLDAEIDDDKYGFVASGTLNPQKARILLMLSLTQTKNYQDVQKM FQYY >gid:501210 VPA0377 hypothetical protein MKETKITISLPSLIHRIGGDHAKRAKTLAAEKQCDLKRIRRSRNWQISGE ALDVKAFLDHLKSEEAEVMRFAINKIEQALLAHQDKLEPLDVKLIRLVRQ NPNITLAELMAETNCTLVQARTARFDAELL >gid:501223 VPA0390 ATP-dependent RNA helicase RhlE MGFTSLGLSAPILKAIQEKGYDTPSPIQAKAIPAILEGKDVMAAAQTGTG KTAGFTLPILERLSNGPRVRANQVRALILTPTRELAAQVQENVFMYGRHL PLSSAVVFGGVKINPQMLRLRKGADVLVATPGRLMDLYNQNAVKFDQLEV LVLDEADRMLDMGFIRDIRKILALLPKQRQNLLFSATFSDEIRDLAKGLV NNPVEISVNPANSTARTVEQSIYPADVKKKAPMLVKLIKDGDWKQVLVFT KTKHGANRLAKFLIEQNLPAAAIHGNKSQGARTKALADFKSGEIRVLVAT DIAARGIDIPQLPQVVNFELPKVAEDYVHRIGRTGRAGEVGKAISLVCAL EASELFAIERLIQEVLPRKELEGFAPTNVVPESKLDTRPIKPKKPKKPKK PKAPNASSENAPATEKKAGNGANKPKRRFNGGNNGNKNSTNQGGAGKPKG NREGQGRAHSKPDDRKPNGNKPNGNKPNGNKPNGNKSGNAGKPSGNRKPN NAKPAGNKPSGQRRKPRPQAAN >gid:501307 VPA0474 spermidine n1-acetyltransferase MKKGLKMRALERSDLRFIHELNNNRNIMAYWFEEPYESYDELEELYRKHI HDDAERRFVVEDADGILIGLVELIEINYIHRSAEFQIIIAPDHQGRGYAM EMIHRALDYSFSILNLRKIYLLVAVENEVAIHLYKKCGFIEEGHLIEEYF INGSYRDVKRMYVLKHQYQKSIEEQA >gid:501416 VPA0583 putative ATP-dependent RNA helicase MTDKTQQATFADLGLIPTLVERLEALEYNQPTPIQSHAIPHVLDGRDMIG GANTGSGKTAAFSLPILQKILQQGESNDRRGNFVSHLILVPTRELASQVA YNVKSYSYHLRDKIKTVAVFGGVSVNPQMLALRGGCDIIVATPGRLLDLV SSNAIKLDQVKTLVLDEADRMLSLGFTEELNKILALLPEKKQTLLFSATF PEKVTALAQHLLNDPVEVQLQSAEASTLVQRVFSVNKGEKTAVLAHLIKQ HQWRQTLIFVNAKNACNHLAQKLSKRGITAEVFHGDKGQGARTRVLDGFK SGEIQVLIATDIAARGLDIEKLPVVINFDLPRSPADYMHRIGRSGRAGEV GLGLSLIDYDDYHHFKVIEKKNKFQLEREQVEGFEVEDDQSEAYFLPMKP RAKPAGTGKKKKKRNQ >gid:501423 VPA0590 putative ATP-dependent RNA helicase MSFSSQGFAPEVVKALAECGYEKLTPIQQKAIPMARKGHDIFATAQTGTG KTAAFSLPMIQQLLDSGRTASRKTARALILAPTRELAEQIADNIKAYTKY TDLSVVAVFGGRKMSSQVSALENGVDILVATPGRLEEHIEQGNVSVANLE FLVFDEADRILDMGFIHAVRKIMLDVDTDPQIMMFSATTSSQLNLLAKDI LRKPKRIEVERANTTAHTVAHVLYPVDQERKTELLSELIGRKNWQQVLVF VNYKETANDVVKELKLDGIKAVVCHGDRAQSARRRALEEFKTGKVRVMVA TDVAARGLDIEDLPHVVNYDMPFLAEDYVHRIGRTGRAGKQGHAVSFVNR DEELTVVQVENLIQQRIRRIELAGYEPKQRESYIEKLNSKPAFKNRQGRR NNPNQSATDQGSAERRLAMVKRLKARRGTN >gid:501439 VPA0605 hypothetical protein MALGCILKTTYQENVMSVSQMATSRLYKLVQILCSARNANLPVEQGKCLY EPIENGVELHHAHFLLDSQHSEYTSPIAKILFDSQTQLWRFYVPASRSED IRWIPYKKLPHSHTLEDLLAELESDPQACFWE >gid:501442 VPA0608 ATP-dependent RNA helicase DeaD MQDSVIQFSDLSLNDSILSALDGMGFVSPTPIQAAAIPHLLEGADALGKA QTGTGKTAAFSLPLLNKLDLDQRKPQAIVLAPTRELAIQVAAEMKNLGKN IKGLKVLEIYGGASIVDQMRALKNGAHVVVGTPGRVQDLINRERLHLDEV NTFVLDEADEMLNMGFVDDVTAIMEHAPESAQRVLFSATMPPMLKNIVER FLRDPVTVDVAGKNHTVDKVQQQFWVVKGVEKDEAMSRLLETEETDASIV FVRTRQDTERLADWLSARGFKAAALHGDIPQSLRERTVDHIKQGVIDILV ATDVVARGLDVPRITHVFNYDIPFDVESYIHRIGRTGRAGRKGKAILLVR TNQIRMLRTIERVTKSSMEEIQLPLRDQVAEARLNKLAAELEAEKEHKAL DKFAELVEKLQTSLEIDPAMLAAMLLKRQQGKRPLFYIGEDPMVEAIERD KQRRKERREGGREGGRSFNNQDWDTYQLQVGREQGVQVKDIVGALANELG LGKGSIGAIKLAQGHTFVQLPKAMTSEAASKLSKLRIRQQDVGAVVCDFD DFRESRGGRRDGGRRDGGRREGGFRGNREGGNRGGERREGGRREGGFRGN RDGNREGNREGGERRFDRNRGGDHRGNYRGERGHGRGRRTQDA >gid:501594 VPA0760 putative ribosomal-protein-serine N-acetyltransferase MYPHDYQGNGSQARFSVSERVSIEPLTTKHATVLLEVVNTYRNSLSGYLP WTDFVTNRREAVNYISQRVNSKALDAHWCAIYFDEQFTGVIGIKGVDSHT HVTEIGYWLANNGRGHRVIDQVLAVLIPFLKQKGHAQFIQFHCMEDNIAS INIAERAGATLKEYVDHEFETLDRSQRLGIYELRLT >gid:501618 VPA0784 polypeptide deformylase MAVLEILSIPDPRLKVKAEKVTDVSTIQTLIDDMLETLYATGNGIGLAST QVGRKEAVVVIDISDERNDPLILVNPEVVSGENKALGQEGCLSVPEYYAD VERYTSVVVSALDRDGNPITIESDEFLAIVMQHEIDHLSGNLFIDYLSPL KQKMAMKKVKKYVKAQAK >gid:501679 VPA0845 ATP-dependent RNA helicase, DEAD box family MRFIMSVNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAA AQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQY AEHTDLRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNIS KTGVLVLDEADRMLDMGFWPDLQRILRRLPNDKQIMLFSATFEKRIKTIA YKLMDSPVEVEVSPANTTAETVKQMVYPVDKKRKRELLAYLIGSRNWQQV LVFTKTKQGSDELAKELKLDGIKAVSINGDKSQGARQRALDEFKQGKVRA LIATDVAARGLDIQELEQVVNFDMPFKAEDYVHRIGRTGRAGKSGLAVSL MSRDEEYLLRAIETLLDQRLPQEWLEGFEPSLIEEVEPERDGGGRRKSRS SEKRKLKAKLAIHKNRGKHRK >gid:501723 VPA0888 Sui1 family protein MTLVYSTETGRIKPEEEKVARPKGDGIVRIQRQTKGRKGKGVCIVSGLDL DDAPLKLLAAELKKVCGCGGSVKDGTIEIQGDARDKIKTHLEKKGMTVKL AGG >gid:501759 VPA0924 hypothetical protein MQISSDVHNYMETLVGQVLSSDQYTSQFDNEQLADIACLALIQLKPVYIR HDIDFLSALPERKLTQFKQSVDVAVHNAAAMILEDRRKNRDNDVPVIFSH TSYDDDKELDWFEKPILNVNIR >gid:501813 VPA0977 putative acetyltransferase MKTLTTERLILRLVSVDDAPFILELYNHPDFYRFVGDKQMRTDYEAVRYI KENMLRMEEKKGVSLLVVEDKQTKQPLGICGLVKRDTLNAYDIGYGFLPS AYGQGFAIEAAKAVIEYAKQAMQLSQLLAITNNDNIRSISLLKKLGFEFE HVEQQYDNGRTLELYTLQL >gid:502031 VPA1188 conserved hypothetical protein MLKISNSVTLQEWEIQLTPIRAQGNGGQNVNKVATAIHLRFDIHHSSLPE FYKERLLALSDSRITKDGVVIIKAQQFRTQEKNKEDALNRLQELIKAAAL QDKKRIKTKPTRASQRRRLDSKNKQGAKKQQRKKVLY >gid:502148 VPA1303 hypothetical protein MKKLSLLGLLILFGCNQQNTPTPDPNHNQPHQSFKKTPEIAKELKAQPTI DDQFALLYRKFDYTLDRSDSLTGRDENKDGIRDDIEAFINALEVSEPVRN ALKQDARQTQKNLYYDWSEKTEVNIDKAMAIGDEFDKVLACKDFVGIPVD DSIDTSKTIAALTYNTKARTVAYLTYNHLLDGSVSTLLPAEQQYCE >gid:502319 VPA1468 ATP-dependent RNA helicase, DEAD box family MENTLQFKDLGLDNRLLKNLKHYDFKKPTDIQKQAIPVAIAGKDLLASSK TGSGKTLAFVLPMLHKSLKTKSFSAKDPRAVILAPTRELAKQVYGELRSM LAGLSYDAALILGGENFNDQVKALRRYPKFIVATPGRLADHLEHRSLYLD GLETLILDEADRMLDLGFAPELRRIHNAAKHRRRQTLMFSATLDHAEVND IASEMLNAPKRIAVGVSNEEHKDITQKFYLCDHLDHKEAILERVLSEAEY RQVIIFTATRDDTERLTAKLNEKKLKAVALSGNLNQTQRNTIMSQFERAV FKILVTTDVASRGLDIATVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDA ISLVGPKDWDSFKRIETYLQQDLAFSVFEDLKGKFKGLKPPKKDFRNKKA TTKKARPQAKKVAKQPAKRDKSFYKNVSVGDDVFIPKKKPAAPSSEES >gid:502398 VPA1547 hypothetical protein (LafA 5' region) MVNLISTHAIYEYLCSLAVQHIVTDDDQLVFEALKHNDIQHACQAIRETQ SGEVVYQHLTLRFGLRGEQSVYQFELSEQMQYCLDLFSLYLALRQTQFQL EAFHPDLISNVVVPIRVDALLWDPGVYFLEQMVQFHSAAFQHVIPSLQAD ETLCLHERMETLVEKLKENAFALWFEVATSQTHFERIAEFDPDMIKLSVT IENKQDQHSFLPIARFLRKHKYQWVAGRVASQVELNRYRLLGASYYFGYF SDIPTSLSFRSFDEE >gid:502550 VPA1699 ATP-dependent RNA helicase, DEAD box family MPFSTLSLSSELIHALPKDFKKPTDIQALAIPELLAGQDLLALANTGSGK TLAYGLPLLEKLRVNPEQKALILVPTRELAMQVSEAINQVGQALDLNTVC LCGGVDKEQQQQALATNPHILVATTGRLVDLANNGLDLSKVHYLVLDEAD RLLDMGFWPDVQNIAMQTSNQRQTAMFSATFSDELKGKVKLLMQAPKQVA AHQENSTNQDIVETLYLVNKGSKTKALIELIKQNSWTQVLVFIGAKENAD GLAKKLNKAGISTNALHGDKSQAEREEALAQFKSGQIQVLIATDLLARGI HIEQLPVVINFELPMHAETYVHRVGRTARAGEQGVAMSLVCHGEMDALNA IRHLTQRALPVQDLVGFPVTDKPSTGESKRAPRDKKANRRTNAKKSIKQF QGKSKRPAPSAK >gid:502571 VPA1720 putative acetyltransferase MTIQPTLTTERLVLRPFNIGDCQQVALLAGDKRIADMTANIPHPYELPMA QAWIDRHYPMYQQHQGVAYAITLRNTGELLGAVSLPRIEEGYGTLGYWVG VPHWGKGYAFEASKVLLEFARMHFELNGITVMHLVDNQRSKSVIQKLKIP YVGDKTLRMQGKERKVCVYQLTFVASE >gid:502574 VPA1723 putative ribosomal protein N-acetyltransferase MIFRSFFTHRIASMETKRLKLIPACLERAEEAHQAVVRSQKTLEVYLPWV PHVLTLEAMIEGTEKAIANFENFEEELRYYIIEKESDRLLGAVGLMIRDP DVPSFEIGYWLDDAAVGNGYVAEAVLEVERYAFDDLGAKRIAIHADSTNQ KSRAVAERCGYEFEGELRNERLTTSGELSNTVIYSKIRE