Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Gene type: CDS
Genomic element: chromosome
Number of genes found: 186
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ECA0326 | putative plasmid stability protein | SubName: Full=Putative plasmid stability protein; | chromosome | CDS | 374452 | 288 | + | 0.423611 |
NA | ECA3012 | probable acetyltransferase | SubName: Full=Probable acetyltransferase; | chromosome | CDS | 3365704 | 576 | + | 0.519097 |
NA | ECA2141 | probable amidase | SubName: Full=Probable amidase; EC=3.5.1.4; | chromosome | CDS | 2440593 | 1803 | + | 0.586245 |
NA | ECA2183 | conserved hypothetical protein; putative ATP/GTP-binding protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 2486231 | 1092 | - | 0.504579 |
NA | ECA1958 | putative translation initiaiton factor | SubName: Full=Putative translation initiaiton factor; | chromosome | CDS | 2217316 | 330 | + | 0.518182 |
NA | ECA2732 | putative elongation factor | RecName: Full=Elongation factor P-like protein; | chromosome | CDS | 3072423 | 573 | + | 0.499127 |
NA | ECA3239 | putative RNA methyltransferase | RecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; | chromosome | CDS | 3622058 | 726 | - | 0.528926 |
NA | ECA2799 | putative dihydrouridine synthase | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 3139631 | 933 | - | 0.558414 |
NA | ECA2376 | putative endoribonuclease | SubName: Full=Putative endoribonuclease; | chromosome | CDS | 2687612 | 345 | + | 0.53913 |
NA | ECA2292 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2597688 | 621 | - | 0.484702 |
NA | ECA2501 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2819423 | 696 | - | 0.45546 |
NA | ECA2170 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2474317 | 1146 | - | 0.539267 |
NA | ECA3621 | probable tRNA/rRNA methyltransferase | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 4067902 | 735 | - | 0.553742 |
NA | ECA3191 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3571239 | 552 | + | 0.556159 |
NA | ECA2440 | putative RNA pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2755854 | 657 | + | 0.490107 |
NA | ECA2672 | putative RNA methyltransferase | RecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; | chromosome | CDS | 3007088 | 1128 | - | 0.547872 |
NA | ECA3892 | putative RNA methyltransferase | SubName: Full=Putative RNA methyltransferase; | chromosome | CDS | 4357649 | 687 | - | 0.544396 |
NA | ECA2908 | putative plasmid replication protein | SubName: Full=Putative plasmid replication protein; | chromosome | CDS | 3253486 | 765 | - | 0.359477 |
NA | ECA3477 | putative translation initiation factor EIF-2B | RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi; Short=MTR-1-P isomerase; EC=5.3.1.23; AltName: Full=S-methyl-5-thioribose-1-phosphate isomerase; | chromosome | CDS | 3898447 | 1029 | + | 0.596696 |
NA | ECA0674 | putative phage-related protein | SubName: Full=Putative phage-related protein; | chromosome | CDS | 747553 | 270 | - | 0.511111 |
NA | ECA1319 | conserved hypothetical protein | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 1492350 | 1425 | - | 0.509474 |
NA | ECA1651 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1901913 | 255 | - | 0.427451 |
NA | ECA0256 | putative dihydrourdine synthase | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 300298 | 966 | - | 0.524845 |
NA | ECA4364 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 4888643 | 1647 | - | 0.522769 |
NA | ECA0287 | putative sigma(54) modulation protein | SubName: Full=Putative sigma(54) modulation protein; | chromosome | CDS | 335696 | 288 | - | 0.434028 |
NA | ECA3144 | probable formyl transferase | RecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; | chromosome | CDS | 3508744 | 2022 | - | 0.553412 |
NA | ECA3260 | putative cytidine and deoxycytidylate deaminase | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 3651263 | 525 | - | 0.569524 |
NA | ECA2291 | putative RNA pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2596643 | 885 | - | 0.548023 |
NA | ECA0654 | conserved hypothetical protein | RecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; | chromosome | CDS | 727975 | 1140 | + | 0.535965 |
NA | ECA4443 | 50S ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 4985770 | 141 | + | 0.51773 |
NA | ECA0380 | putative endoribonuclease | SubName: Full=Putative endoribonuclease; | chromosome | CDS | 431494 | 387 | - | 0.550388 |
NA | ECA0063 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 79098 | 288 | - | 0.434028 |
NA | ECA3070 | conserved hypothetical protein | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 3427616 | 933 | - | 0.516613 |
NA | ECA4315 | putative RNA-methyltransferase | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 4834403 | 465 | - | 0.529032 |
NA | ECA3660 | putative dihydrouridine synthase | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 4109655 | 1023 | + | 0.538612 |
NA | ECA3349 | putative sigma(54) modulation protein | SubName: Full=Putative sigma(54) modulation protein; | chromosome | CDS | 3765670 | 342 | + | 0.45614 |
NA | ECA3499 | probable amidase | SubName: Full=Probable amidase; | chromosome | CDS | 3918901 | 1491 | + | 0.579477 |
NA | ECA1025 | putative RNA pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1147729 | 786 | + | 0.53944 |
NA | ECA3516 | putative tRNA/rRNA methyltransferase | SubName: Full=Putative tRNA/rRNA methyltransferase; | chromosome | CDS | 3936945 | 1152 | - | 0.544271 |
NA | ECA0696 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 767061 | 294 | - | 0.462585 |
NA | ECA1645 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1897721 | 765 | + | 0.341176 |
NA | ECA2708 | conserved hypothetical protein | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 3042056 | 1329 | + | 0.520692 |
NA | ECA3318 | putative glutamyl-tRNA synthetase | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 3729711 | 969 | + | 0.520124 |
NA | ECA0931 | putative avirulence protein | SubName: Full=Putative avirulence protein; | chromosome | CDS | 1041218 | 1869 | - | 0.53023 |
alaS | ECA3367 | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 3782345 | 2628 | - | 0.517123 |
ansA | ECA2340 | L-asparaginase I | SubName: Full=L-asparaginase I; EC=3.5.1.1; | chromosome | CDS | 2651794 | 1020 | + | 0.512745 |
ansB1 | ECA1102 | L-asparaginase precursor | SubName: Full=L-asparaginase; EC=3.5.1.1; | chromosome | CDS | 1248508 | 1041 | + | 0.51585 |
ansB2 | ECA4126 | L-asparaginase II | SubName: Full=L-asparaginase II; EC=3.5.1.1; | chromosome | CDS | 4603858 | 1050 | + | 0.545714 |
argS | ECA2520 | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 2835515 | 1731 | + | 0.515309 |
asnS | ECA2541 | asparaginyl-tRNA synthetase | RecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; | chromosome | CDS | 2864092 | 1401 | + | 0.511777 |
aspS | ECA2496 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; | chromosome | CDS | 2811956 | 1800 | - | 0.538889 |
cafA | ECA0271 | ribonuclease G | SubName: Full=Ribonuclease G; EC=3.1.4.-; | chromosome | CDS | 316547 | 1470 | + | 0.521769 |
cca | ECA3588 | tRNA nucleotidyltransferase | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 4034399 | 1245 | + | 0.556626 |
crl | ECA3464 | curlin genes transcriptional activator | RecName: Full=Sigma factor-binding protein Crl; | chromosome | CDS | 3883953 | 375 | - | 0.493333 |
cysS | ECA3151 | cysteinyl-RNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 3517663 | 1386 | - | 0.518759 |
dbpA | ECA3092 | ATP-independent RNA helicase | RecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; | chromosome | CDS | 3451774 | 1383 | - | 0.53073 |
deaD | ECA0718 | ATP-independent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 787369 | 1914 | + | 0.543365 |
def | ECA3999 | peptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 4482450 | 510 | + | 0.482353 |
dtd | ECA0032 | D-tyrosyl-tRNA(Tyr) deacylase | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 39698 | 438 | + | 0.515982 |
efp | ECA3976 | elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 4447619 | 567 | - | 0.499118 |
fmt | ECA4000 | methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 4482986 | 948 | + | 0.511603 |
frr | ECA1034 | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 1157130 | 558 | + | 0.5 |
fusA | ECA4036 | elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 4503842 | 2115 | - | 0.491253 |
glnS | ECA1328 | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 1504627 | 1659 | + | 0.503918 |
gltX | ECA3291 | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 3696813 | 1416 | - | 0.523305 |
glyQ | ECA0084 | glycine-tRNA synthetase, alpha subunit | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; | chromosome | CDS | 98527 | 915 | + | 0.528962 |
glyS | ECA0085 | glycine-tRNA synthetase, beta subunit | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 99451 | 2070 | + | 0.546377 |
gshB | ECA3924 | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome | CDS | 4392301 | 960 | + | 0.5375 |
hemK | ECA2191 | protein methyltransferase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 2493971 | 846 | + | 0.561466 |
hisS | ECA3219 | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 3601955 | 1275 | - | 0.533333 |
hslR | ECA4104 | heat shock protein | RecName: Full=Heat shock protein 15; | chromosome | CDS | 4573911 | 411 | + | 0.545012 |
ileS | ECA3876 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 4335368 | 2814 | - | 0.536603 |
infA | ECA2653 | translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 2988043 | 219 | + | 0.488584 |
infB | ECA0712 | translation initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 779306 | 2703 | + | 0.512394 |
infC | ECA2421 | translation initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 2733240 | 543 | - | 0.471455 |
kptA | ECA0395 | RNA 2'-phosphotransferase | RecName: Full=Probable RNA 2-phosphotransferase; EC=2.7.1.-; | chromosome | CDS | 452395 | 543 | - | 0.368324 |
ksgA | ECA3859 | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 4319027 | 819 | + | 0.505495 |
leuS | ECA1309 | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 1480684 | 2583 | - | 0.53736 |
ligT | ECA3315 | 2'-5' RNA ligase | SubName: Full=2-5 RNA ligase; EC=6.5.1.-; | chromosome | CDS | 3727604 | 531 | + | 0.555556 |
lysS | ECA0774 | lysyl tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 844582 | 1518 | + | 0.536232 |
map | ECA1030 | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 1153258 | 795 | - | 0.514465 |
miaA | ECA3935 | tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 4402952 | 942 | - | 0.53397 |
osmE | ECA2411 | osmotically inducible lipoprotein E | SubName: Full=Osmotically inducible lipoprotein E; | chromosome | CDS | 2723691 | 330 | - | 0.475758 |
pcnB | ECA3319 | poly(A) polymerase | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 3730782 | 1449 | + | 0.52657 |
pheS | ECA2418 | phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 2731251 | 984 | - | 0.515244 |
pnp | ECA0716 | polyribonucleotide nucleotidyltransferase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 784066 | 2121 | + | 0.522867 |
poxA | ECA3968 | putative lysyl-tRNA synthetase | RecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; | chromosome | CDS | 4441333 | 978 | - | 0.543967 |
prfA | ECA2190 | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 2492889 | 1083 | + | 0.545706 |
prfB | ECA0773 | putative peptide chain release factor 2 | RecName: Full=Peptide chain release factor 2; Short=RF-2; | chromosome | CDS | 843475 | 1099 | + | 0.508644 |
prfC | ECA0468 | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 533382 | 1590 | + | 0.520126 |
prfH | ECA3617 | putative peptide chain release factor | SubName: Full=Putative peptide chain release factor; | chromosome | CDS | 4065493 | 624 | + | 0.557692 |
prmA | ECA0258 | ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 302533 | 888 | - | 0.576577 |
proS | ECA3529 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 3956293 | 1719 | + | 0.511344 |
pth | ECA2184 | peptidyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 2487452 | 588 | - | 0.494898 |
queA | ECA1119 | S-adenosylmethionine:tRNAribosyltransferase-isom erase | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 1271755 | 1068 | + | 0.544944 |
rbfA | ECA0713 | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 782083 | 399 | + | 0.478697 |
rfbF | ECA1422 | glucose-1-phosphate cytidylyltransferase | SubName: Full=Glucose-1-phosphate cytidylyltransferase; EC=2.7.7.33; | chromosome | CDS | 1614552 | 774 | + | 0.432817 |
rhlB | ECA4213 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 4709598 | 1293 | + | 0.524362 |
rhlE | ECA2805 | putative ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 3145672 | 1452 | - | 0.568182 |
rimJ | ECA2524 | ribosomal-protein-alanine acetyltransferase | SubName: Full=Ribosomal-protein-alanine acetyltransferase; EC=2.3.1.128; | chromosome | CDS | 2840649 | 585 | - | 0.511111 |
rimK | ECA2679 | ribosomal protein S6 modification protein | RecName: Full=Probable alpha-L-glutamate ligase; EC=6.3.2.-; | chromosome | CDS | 3014433 | 912 | - | 0.528509 |
rimM | ECA3358 | 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 3773866 | 549 | - | 0.468124 |
rluA | ECA3854 | ribosomal large subunit pseudouridine synthase A | SubName: Full=Ribosomal large subunit pseudouridine synthase A; EC=4.2.1.70; | chromosome | CDS | 4312461 | 654 | + | 0.556575 |
rluC | ECA1790 | ribosomal large subunit pseudouridine synthase C | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2038594 | 957 | + | 0.505747 |
rluD | ECA3347 | ribosomal large subunit pseudouridine synthase D | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3763501 | 978 | - | 0.50818 |
rnd | ECA2371 | ribonuclease D | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 2680470 | 1125 | - | 0.526222 |
rne | ECA1789 | ribonuclease E | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 2034716 | 3285 | - | 0.518113 |
rnpA | ECA4444 | ribonuclease P protein component | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 4985929 | 360 | + | 0.516667 |
rph | ECA0140 | ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 162282 | 717 | + | 0.571827 |
rplA | ECA0220 | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 253304 | 705 | + | 0.486525 |
rplB | ECA4028 | 50S ribosomal subunit protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 4498610 | 822 | - | 0.514599 |
rplC | ECA4031 | 50S ribosomal subunit protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 4500364 | 630 | - | 0.490476 |
rplD | ECA4030 | 50S ribosomal subunit protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 4499748 | 606 | - | 0.506601 |
rplE | ECA4019 | 50S ribosomal subunit protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 4494967 | 540 | - | 0.492593 |
rplF | ECA4016 | 50S ribosomal subunit protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 4493675 | 534 | - | 0.501873 |
rplI | ECA3610 | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 4059527 | 453 | - | 0.509934 |
rplJ | ECA0221 | 50S ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 254326 | 498 | + | 0.522088 |
rplK | ECA0219 | 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 252872 | 429 | + | 0.496504 |
rplL | ECA0222 | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 254890 | 366 | + | 0.445355 |
rplM | ECA0306 | 50S ribosomal subunit protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 352201 | 429 | + | 0.494172 |
rplN | ECA4021 | 50S ribosomal subunit protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 4495846 | 372 | - | 0.486559 |
rplO | ECA4012 | 50S ribosomal subunit protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 4492173 | 435 | - | 0.489655 |
rplP | ECA4024 | 50S ribosomal subunit protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 4496826 | 411 | - | 0.515815 |
rplQ | ECA4005 | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 4487676 | 393 | - | 0.521628 |
rplR | ECA4015 | 50S ribosomal subunit protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 4493312 | 354 | - | 0.519774 |
rplS | ECA3356 | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 3772662 | 348 | - | 0.482759 |
rplT | ECA2419 | 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 2732547 | 357 | - | 0.490196 |
rplU | ECA0690 | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 761608 | 312 | + | 0.477564 |
rplV | ECA4026 | 50S ribosomal subunit protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 4497968 | 333 | - | 0.495495 |
rplW | ECA4029 | 50S ribosomal subunit protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 4499449 | 303 | - | 0.475248 |
rplX | ECA4020 | 50S ribosomal subunit protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 4495521 | 315 | - | 0.431746 |
rplY | ECA2745 | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; | chromosome | CDS | 3086967 | 285 | + | 0.463158 |
rpmA | ECA0691 | 50S ribosomal subunit protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 761939 | 258 | + | 0.465116 |
rpmB | ECA0146 | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 167881 | 237 | + | 0.514768 |
rpmC | ECA4023 | 50S ribosomal subunit protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 4496635 | 192 | - | 0.484375 |
rpmD | ECA4013 | 50S ribosomal subunit protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 4492611 | 180 | - | 0.488889 |
rpmE | ECA4257 | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 4770469 | 216 | - | 0.481481 |
rpmE2 | ECA1168 | putative 50S ribosomal protein L31 (second copy) | RecName: Full=50S ribosomal protein L31 type B; | chromosome | CDS | 1322445 | 249 | - | 0.473896 |
rpmF | ECA1793 | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 2040877 | 171 | + | 0.491228 |
rpmG | ECA0147 | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 168129 | 168 | + | 0.410714 |
rpmI | ECA2420 | 50S ribosomal subunit protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 2732947 | 198 | - | 0.474747 |
rpmJ | ECA4010 | 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36 1; | chromosome | CDS | 4490684 | 117 | - | 0.452991 |
rpmJ2 | ECA1167 | putative 50S ribosomal protein L36 (second copy) | RecName: Full=50S ribosomal protein L36 2; | chromosome | CDS | 1322284 | 144 | - | 0.4375 |
rpsA | ECA2591 | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 2924025 | 1674 | - | 0.490442 |
rpsB | ECA1031 | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 1154397 | 726 | + | 0.491736 |
rpsC | ECA4025 | 30S ribosomal subunit protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 4497249 | 702 | - | 0.488604 |
rpsD | ECA4007 | 30S ribosomal subunit protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 4489124 | 621 | - | 0.489533 |
rpsE | ECA4014 | 30S ribosomal subunit protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 4492797 | 501 | - | 0.520958 |
rpsF | ECA3613 | 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 4060579 | 393 | - | 0.529262 |
rpsG | ECA4037 | 30S ribosomal subunit protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 4506053 | 471 | - | 0.490446 |
rpsH | ECA4017 | 30S ribosomal subunit protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 4494222 | 393 | - | 0.465649 |
rpsI | ECA0307 | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 352645 | 393 | + | 0.526718 |
rpsJ | ECA4032 | 30S ribosomal subunit protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 4501026 | 312 | - | 0.512821 |
rpsK | ECA4008 | 30S ribosomal subunit protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 4489775 | 390 | - | 0.512821 |
rpsL | ECA4038 | 30S ribosomal subunit protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 4506620 | 375 | - | 0.52 |
rpsM | ECA4009 | 30S ribosomal subunit protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 4490181 | 357 | - | 0.484594 |
rpsN | ECA4018 | 30S ribosomal subunit protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 4494648 | 306 | - | 0.529412 |
rpsO | ECA0715 | 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 783547 | 270 | + | 0.496296 |
rpsP | ECA3359 | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 3774433 | 249 | - | 0.506024 |
rpsQ | ECA4022 | 30S ribosomal subunit protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 4496381 | 255 | - | 0.447059 |
rpsR | ECA3611 | 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 4060021 | 228 | - | 0.491228 |
rpsS | ECA4027 | 30S ribosomal subunit protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 4498315 | 279 | - | 0.501792 |
rpsT | ECA3878 | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 4339580 | 264 | + | 0.462121 |
rpsU | ECA0682 | 30S ribosomal subunit protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 755185 | 216 | - | 0.49537 |
rrmJ | ECA0697 | ribosomal RNA large subunit methyltransferase | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 767499 | 630 | + | 0.48254 |
rsmC | ECA0735 | ribosomal RNA small subunit methyltransferase C | RecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; | chromosome | CDS | 803587 | 1047 | + | 0.551098 |
rsuA | ECA2742 | ribosomal small subunit pseudouridine synthase a; ribosomal small subunit pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3083724 | 696 | - | 0.494253 |
rumA | ECA3570 | 23S rRNA (uracil-5-)-methyltransferase | RecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; | chromosome | CDS | 4007131 | 1353 | - | 0.55728 |
serS | ECA2644 | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 2974318 | 1296 | - | 0.517747 |
smpA | ECA0839 | putative outer membrane lipopotein (small protein A) | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 928951 | 336 | - | 0.535714 |
srmB | ECA3287 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 3692383 | 1326 | + | 0.527149 |
sun | ECA4001 | Sun protein | RecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; | chromosome | CDS | 4484001 | 1290 | + | 0.493023 |
tgt | ECA1120 | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 1272920 | 1146 | + | 0.506981 |
thrS | ECA2422 | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 2733785 | 1929 | - | 0.495594 |
trmA | ECA4239 | tRNA (uracil-5)-methyltransferase | RecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; | chromosome | CDS | 4750499 | 1104 | + | 0.526268 |
trmD | ECA3357 | tRNA(guanine-N1)methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 3773072 | 756 | - | 0.517196 |
trmH | ECA0037 | putative tRNA (guanosine-2'-O)-methyltransferase | SubName: Full=Putative tRNA (Guanosine-2-O)-methyltransferase; EC=2.1.1.34; | chromosome | CDS | 47188 | 693 | - | 0.536797 |
trmU | ECA2442 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 2757088 | 1107 | + | 0.526649 |
trpS | ECA4087 | tryptophanyl-tRNA synthetase | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; | chromosome | CDS | 4556779 | 1005 | - | 0.519403 |
truA | ECA3058 | tRNA pseudouridine synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 3414618 | 852 | - | 0.555164 |
truB | ECA0714 | tRNA pseudouridine synthase B | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 782481 | 945 | + | 0.522751 |
tsf | ECA1032 | elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 1155257 | 852 | + | 0.487089 |
tufA | ECA0216 | elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 250357 | 1185 | + | 0.5173 |
tufB | ECA4035 | elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 4502588 | 1185 | - | 0.5173 |
tyrS | ECA1936 | tyrosyl-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 2192856 | 1278 | + | 0.519562 |
valS | ECA0402 | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 458055 | 2856 | - | 0.541667 |