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Gene list

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COG category: Carbohydrate transport and metabolism
Gene type: CDS
Genomic element: chromosome II

Number of genes found: 28

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# Pseudoalteromonas haloplanktis TAC125, TAC125

>PSHAb0360 putative permease
MEKDRRVIALLFDIVGMTGTALVVGSFFLLQLNKVSPASLLYNMMNLTGA
ILLLISLCYNFNLASFVIEIFWIAASLIGLYKYVKNKPKLGKA
>PSHAb0549 putative fructose-1,6-bisphosphatase
MKNLYTQLEQDNVPKTLTLLLQSIVGACTEIATRINHGALSDVLGSLPDH
NVQGEVQKKLDVIANNILIESLKKNKQVRAVASEEVEDIILCNSFGKYLI
CFDPLDGSSNTDVNGSLGTIFSITSASAAQTEVSEEDFFSTGRSIIAAGY
VLYGPSLMLALSTGSGTHIYTLDPSNNNFMLTHPNLNIPEDTNEFSFNLS
NQFKWPENVQKYIVDLQLGTDGIRKKNFNMRWLGAMVGDMHRILCKGGIF
GYPEEKNFKYGKLRLLYEANPIAFLVEQANGLASNGTTSILDTVPSSIHQ
RIPVFIGSKNEVLLIEKYALGK
>PSHAb0023 putative membrane protein
MNTTPQDDISSDAKPGADTQTATNSYKNLHKPSSEFNSRDEYLEHELQIM
QPKRWRPNLPFRDYRFEFEDAIPAMAATIGKVVMVAAIAATFASPLGLSD
AFVLENVRYELLIVAFFIILFSGFILPTANLAGTHGPLIPLIPIVVAAGG
HPMAFGLLIAAFGLILAISKGGTLLAKLTSKGVCGGLLLYLGFIGITSQV
KKLFAWAEAIDMTHIAFIVIFSTIILYAMLEHFKKRWLAVPLSCILGGAI
AFALGAPFEFHTAPGLPNMDPMYWWGEDTGWMLGLPTLESFVVVLPFAVL
AVAMWSPDFLGHQVFQKISYPKRTEKVQMNIDDTMLSASVRQTFGSLLGG
ANFASSWGTYIVPAAIAKRPIPAGAILTALFCIIAGVWGYPMDLAIWQPV
LCVALIVGVFIPLLEAGMEMTRVGKTTQSAAIVVFASSLVNPAFGWSLTI
LLDNLGFIGCKERSKELTRMSRWIIPLVMFVLLTSVMAMVGMLPGIPALV
SSFRH
>PSHAb0033 putative membrane protein
MLNKTNALIYFLAFSSGFSIMGIELLGGRILAPFFGSSVHIWGSIITVFM
LSLSFGYLLGGKMSIKRPSLAKYGSIFLLASIMVLPIALFANPIMEFIFT
HIEDSRYGSLLASTALFFVPTIILGMISPYSVRLLVTDSEHSGQVAGGLY
FVSTLGSALGTIITSFYMVLAFDVNAIIIGFALTLAVLGLLAILVNKLFL
AERRYA
>PSHAb0479 putative idonate or gluconate permease
MSDLSLILTAVGSILLLLFLVMKVRLHAVVALILVSMIAGIFSGMSPQMI
AGTIQKGMGGTLGFVAVVVALGAMFGKVMEETGALDRIAHTLLHRFGEKN
ANWALTFTGFICALPLFFDVAVVLLIGIAFAVVRKGGGSVIKIGIALLAG
IAACQAFLIPAPGPILVASQLGADYGYMILFGLLAAIPAMIIGGPLWGSL
IAKSIHVELPEHAQNNDNTRDGEGEPSFGLALGLIALPLLMIALNTIGSR
FVEQQSNLHHWLEFIGHPFTAILAACLMAFYLLGVKRGVPQDRIMEICSS
ALQPAGVIILVTGAGGVFKQVLVDSGVGAALGNMLAGSGLPIVMLAFILA
AAVRVIQGSATVAMLTACGLIIPMLEPLGLDGAQLAAVTIAIGGGSIVLS
HVNDSGFWLANRYLGLTEMQTLKTWTVMETIIGTTGAIVAMIISLFL
>PSHAb0447 conserved protein of unknown function
MQKSFKAALLSALIYPGAGHFALKKHLIGAIFAGVFSVLLLLTLQEVYAM
AQCIANDIVNTRGGASFDDILAAVKHPSAHCAALGQYQYIYLMLVIWFLS
IVDAYRLGRKAVK
>PSHAb0209 putative carbohydrate kinase
MSILINHKSGENVSVSCFGEVLWDCFDSGKRLGGAPLNMCVRINSLGIKA
DMISAVGNDELGAELLGEIASKGVSCDYIAINSDKKTSTVEVTLDSGGSA
SYEIVADTAWDNIALTDELLSKVKSSDVFVFGSLIGRSETSLATLNQLVD
VANFKVFDVNLRAPHYTLATLVDLMNKADFIKLNDEELYEIAKAMGCKFH
SLEQNLAFIAAQTNTEYLCVTKGSHGALLTIKGENYYNSGYLISVVDTVG
AGDSFLGSLIYQLCSSDCAQHAVDFACAVGAMVAESAGATPTLTHQQINE
FMNP
>PSHAb0548 putative fructose-bisphosphate aldolase
MSIRLNMLEKIKNSQGFIAALDQSGGSSPKALEQYGISSSEISSDEEMFK
YIHSMRARIISSSPFNSQKILGAILFKDTLNRYIENIPTAEYLWKHKEIV
PFLKIDEGLMPESDGVQLMKPIKNLGSILTVDTNFVFGTKMRSVIKQASR
IGIQNVVKQQFEIAKEVINSGLMPIIEPEVDIYCEEKQSAELMLHDVIIE
ELNNLENGQQVILKLTLPEVPNLYKDLATHPKVLKLVALSGGYSITQANE
KLKRNTGIIASFSRALLIGLHHDMSDKKFDEKLNNSIEAIYEASIYKL
>PSHAb0214 putative transport protein
MQKISVGLGMTLLVVGNIIAVFSDAIIKTLPAESPTFQFVFMRQLTAVLI
LLPFCLSANKKHLFAGLKWHAVRGHVWLFGIIFMVFALKALPLATANAIF
YAAPLLMLPLAVMIFREQLTKSSIAVAVIGFIGVLIVIQPTDINWAAIFA
LVVAITLAINNVLIRKLPKHHSIMQTLLLTNLVGMPVGLGLALWENEPWH
WAALITAFGSTLFILIYAGICVYVYSKIESSQVASAEYSGLVAAVVVGLF
WFGEVPTLGLIIGASLIILPLVWLANVQKNKQRLVKRQLTK
>PSHAb0159 putative sialidase
MSTVQPSLTNTTVISNIFEAETDGFGSYRIPALLPMPDGKLLAFCEARAI
LSDHAHNKIVLKTSQDNGTSWSDQILVADAGDNALNNPLVVIDAGSGDIV
LMYQEYPYTTPEQVENPAAWVSHAGQNFPSNVHEGAVESGYQGRICRTFV
QRSSDGGLNWSPRVDVTRQVKRPTEVTCYAGGPGIGIQLRIGSYKNRIVM
PFTQGPWDNMKVYAVYSDDGGHQWQYGEVAPAAIAEHANETQMAELADGR
VLLNARSYHGNHLRKTAFSEDGGISWTPLQDTPDLTEPECQGSIISLQHD
AKHSGLLYCGPENQSQRIQGTLKISLDDATSWQHIACVYKGSFGYSSICQ
LSNNEIGVMFERDNYSAISFTRISLQNNDA
>PSHAb0520 conserved protein of unknown function ; putative secreted protein
MKGVKPLIIAGIVAASAAVHANDLNKVIDKSSEITKSAAQSQTKIDKIAD
SMQGRLQQFKTLNKEIDGLAVYNAQLTKQLNNQIAEMQSMNLSMDQVSII
ERQITPLMMRMITGLEQFVLLDVPFLKDEREKRLTSLKAMMERADITSSE
KFRRVLEAYQVEVDYGRTIEAYSALLEVNGKEREVDFLRIGRLELIYLTR
DSKLAGSWDTQTKTFAALPDSTISQINKGLRIARKQLAPDMLTLPVHAAR
>PSHAb0183 putative transporter
MFAQLANLPSSLKQYFIITGNYWAFTLTDGALRMLVVLYFHQLGYGALAI
AMLFLFYEIFGVITNLVGGWLGAQLGLNKTMNIGLGLQILALAMLCVPTD
WLTVAYVMAAQALSGIAKDLNKMSAKSAIKYLVPQNSSGQSQLYKWVAIL
TGSKNALKGVGFFLGGVLLTLFGFVGALFTLIVLLSVAWVISLVFLKGDI
GKAKNKPKFKTLFSKSRAINLLSTARLCLFASRDVWFVVALPVYLATQFN
WNHTWVSGFMAQWVIAYGLVQSQAPRITGQVITSGFNTVNKAYKWVTLLC
VVTGVLALLMQFNSAVNYTLIVGLFIFGGVFAVNSSLHSYLIVSFASSDG
VSLDVGFYYMANAMGRLLGTVLSGWVFQLYGLVACLWVSVFLLIMAAIAT
AFLAKHEG
>PSHAb0129 putative dihydroxyacid dehydratase (ilvD-like)
MTSEKPRKYSQKIVDGSAQAPSRSMLRAVGFNDDDFKKSQVGIASTWSMV
TPCNMHINTLAEEVGKGVDSAGAKSVIYNTITVSDGISMGTEGMKYSLVS
REVICDSIEAVSAGMGHDGIIAIGGCDKNMPGCLMGLARLNRPSIFVYGG
TILPGENHTDIVSVFEAVGSYAAGDIPITQLEHIEKTAIPGAGSCGGMYT
ANTLASAIEALGMSMPNSSAQNAISQNKKQDCIDAGKAIVYLLEHDIKPS
DIMTKKAFENAITLIITLGGSTNAVLHLIAMADAVGVEVTLDDFVRIGDK
TPVIADLRPSGQYLMSELIEIGGIQPLMKRLLDAGMLHGDCMTVTGKTMA
ENLADVADYPAGQNIILPFDKPIKKDSHLVILAGNLAPEGAVSKITGKEG
LRFTGNAKVYDSEEQGFAAIIDGQVVAGDVVVIRYEGPKGGPGMREMLSP
TSAIMGKGLGNDVALITDGRFSGGSRGFVVGHVTPEAYEGGAIALVENGD
SITIDAQSREMTLNITDEEMASRKQRWQQPAPKYTRGLLAKYARTVSSAS
TGAVTDKPS
>PSHAb0042 putative membrane protein
MQASSLSLGSTKLLLLKPLLIFQHISRFSYAFKVCLRFFIAIVGGYFFTA
VSCSLLSAILPLNKADAVLMSVSLSILIYTLVFIYAFYVKSLKTVWISIL
LATAAQLSLLALIKGWV
>PSHAb0081 deoB, Phosphopentomutase (Phosphodeoxyribomutase)
MARAIILMADSLGIGAAPDADKFGDIGANTLAHLLKAYYDETGTALSLPN
LSKLGLIDACEAAGKEPCLVSNRSASQGAWGYAKELSSGKDTPSGHWEMA
GVPVLFDWGYFPKTQPSFPQEFIDELIARTGIPGILGNCHASGTTILEQL
GEEHVKTGKPICYTSADSVFQIAAHEESFGLEKLYQVCETARSLLDEMNI
GRVIARPFLGSNNQDFARTSNRRDYSVLPPAPTLLDVLAKDGGEVISIGK
ISDIYAHQGITQKHKAPGLINLLKKTNELMQSAPDHSLIFTNLVDFDEMF
GHRRNPVGYAKALKEFDDYLPTILNALKADDLLIITADHGCDPTFPGSEH
TREYVPVIAYQPGMTDIPLGERNSFADIGQTLAQWFNLPALEYGDGFIDK
LTTSK
>PSHAb0182 gapB, glyceraldehyde 3-phosphate dehydrogenase
MTIKVGINGFGRMGRLTLRAAVDWPNIEFIKVNDIAGDAKTHAHLLEFDS
VHGRLHHSVTATNNIIEVGKHNITVSNHKTINDNDWSGCDVVIEASGKMK
TTQLLNAYLAQGVKRVVVTAPVKEEGILNIVVGVNDHLYKPSEHKIVTAA
SCTTNCLAPIVKVLQQEVGIKHGSITTIHSITNTQTIIDAPHKDLRRARS
CGTSLIPTTTGSATAITHIFPELKGKLNGHAVRVPLTNASITDCVFELQR
SVSEDEVNGWFKSAANNELKGILGYEEKPLVSIDYATDPRSSIIDALSTM
VINNTQLKLYAWYDNEWGYANRTAELMLKVGLSDQSN
>PSHAb0552 glpF, putative glycerol diffusion channel
MFIKVDLILAFSKEYKMTPFIAEILGTALLILIGGGVVANNILKKTIGEG
GGWMAVTTAWGLAVFIGVVVAGPYSGAHLNPAVTLSLAVAEKFSWTEVPA
YIAAQFIGAMIGAFLVYVIYKDHFDATDDAELKRAVFCTAPAIPNTFRNI
ISEIVGTFVLLICVFYFSAAEIDNGTGTKIGLGSIGAIPVAFVVWGIGLS
LGGTTGYAINPARDLGPRIVHALLPIKGKIDSNWSYSWIPVLGPTIGGTL
AALLYTILS
>PSHAb0550 glpR, transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate (DeoR family)
MTQDQRHESILKLLKERDSISIEELVEHYKVTPQTIRRDLTHLAKLNKLR
RHHGGASVVSSIQNMAYQTRKIMDLEAKQKIAQHLVSMIPNGSSLFINIG
TTTETIAKALLSHENLKVVTNNLNVAAILGVKKDFSVLIAGGEVRHRDGG
IIGETTEDFINQFRMDFGIIGISGIEENGSLLDFDYREVRVAQAIIKNSR
KVLLAADNSKFGRCAMVRLGNISQADDFITDAKPPKSILTLLSEHDVKLH
IAR
>PSHAb0480 idnK, putative D-gluconate kinase active at low temperature (idonate catabolism)
MSQINAGRIFIIMGVSSTGKSSIGYALAKKMDAKFIDGDDLHPKANILKM
SSGQPLNDEDRVPWLERIRDAAFSIEQKNEVAVIVCSALKKKYREQICEG
NVNITFLHLQGSFELVKQRMQDRRGHFMPTELLKSQFETLEIPQADELNV
ISIDINKSFKQVVSACFQATQTDINLASG
>PSHAb0217 malB, putative maltoporin, high-affinity receptor for maltose and maltoseoligosaccharides
MKYNKRIKPSLSLLSILCAATMSVHAAERPAGLSDEDIAYVKQLINNEMQ
AQDDAKAKQELDNGFEFNGYFRSGTNTIIGSGSKNNGSCYSLNYPKNDGV
YYRLGNECRDYSEFQLTKKQQLNGVNFKAVFMMDFAGDSRDPTATEEWSR
RSRQLYVETDNLLDNGTLWIGRRYYYDKAVGSVHILDYKHMQSSGNGVGV
SDITVNETDKLHLAAITYGGEGELTGNKATADTNYQNFMADVRYEMDVGD
AGKVVFALQNLFVNDAIDEAGLTDGRTFTVQWQKQLGNVDQKTVIQYGTG
AMAQNPGAAGTDGGSFDYAADSSSSGFRIFNNGLVDITEKFKLDYMVMYE
KSSDYHTLKSVGVRPHYSISPHWSVLGEVGYNAYQTKTNGIENDEQTLMK
YALALQATADSTEYWSRPSLRFYLSNFDWNKAAGQESGLSVAGKEGDESA
LVAGAQVEIWF
>PSHAb0157 nagA, putative N-acetylglucosamine-6-phosphate deacetylase
MITTLIADHLFDGKTLHSNHPISIKDGKIIAFDTVKGAIETKVSGLLTAG
FIDTQVNGGGGCLLNQNTNLQTLTAMSTAHAKYGTSSLLPTLITSNLNKI
EQTANLISTAVAQHTPGILGVHFEGPHISEPKKGIHSSQQIRGLSQQELD
IYCRDDLGIKIVTLAPENVSSETIKILVDHGVHVCLGHSNASFEQAQAAL
AAGATGFTHLFNAMSALESRAPNMVGAALLDEQSWCGIILDGHHVHPSTA
KLAYRAKAARKMMLVTDSMSTIGSEQTQLHFDGHDINLVGDKLTSNSGQL
AGSALNMITAVNNATHMLDISLTDALNMASLYPAEFLGIEGSRGQLSIGA
NADLTLLSTTNSSPRVLNTWIGGKAIF
>PSHAb0148 nagB, putative glucosamine-6-phosphate deaminase
MQVLIFDDKKAVAENAATLLQKLILAKNNANIGLATGSTPIDLYKQLVSM
YKNKHISFAQVNTFNLDEYYDIDENNSNSYRYFMNSQLFDHIDIDKNNTH
LPTCNAKQDPRKQGEHFEQQIAALGGLDLQLLGIGGNGHIGFNEPSSSFA
SRTRIKSLTEQTVSDNSRMFSDDEQQPKMAMTMGIATIMDAKYVLLIATG
KNKAQAVNDMVNGPLSASCPASILQMHKNAIVIIDNDAASLLANKDYFTW
VSQQNHEINQAFGHFPDL
>PSHAb0149 nagK, putative N-acetylglucosamine kinase with Actin-like ATPase domain/transcriptional regulator (NagC/XylR (ROK) family)
MMNIAIDIGGTKIACALIDNDQIVNSIKVDSIIHTNIDDLAAYVYTVIEK
WVPQASSINIACTGQVSAEFVNFLSVRRKLPLKAQLESLTNLPVTIINDA
SAAAWAEYTVNEQVKNKNFIYITVSTGVGAGIVFNDQIITCADGFCAHLG
HTTVHIQSNHNYSCHCGRKNCVESIASGTAIAKHASKALGKTLNAKDVFT
NYAEHPEVAEIIDNAASAVAELIFNMKATFGNETVVIGGSVGLSALFFNK
VAEKIQQAPAIYQVTLLQPVSGADADLIGVHHYAKNQLIEK
>PSHAb0065 nagZ, Beta-hexosaminidase A precursor (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) (Chitobiase)
MPLQSSIAQPALTLEQQLGQKLLLDFRYFCNQGASKQCRTPMTQLPNELA
NAISKYNIGGVILFSENTQSIEQIITLNQQLQHAASKSSSALPLFISVDQ
EGGRVARLPRDVATSFTGNMSIGATFEKHDSYFAAQTARVMATELSALGI
NVNYAPSIDVNMNPDNPVINVRSFGEDPKRVATLGAAQVAGFENNGIISS
LKHFPGHGDTNVDSHTGLPRVNHAKEVIYQQDLAPFKQIIATQSPGMIMT
AHIQYPALDSSTFTSVDGKSMIKPATMSRKIITDILRHELNYNGVVVTDA
LDMAGISHFFNSTQAVINTFAAGVDIALMPIEIRTIDDLTKLDQLIKDLV
AAVKSKQLNQQEITESAQRITALKSKFKLNTSFNAIDALVNAKHVIGSKA
HRNIEAQLAVAAITQVKNTHNTLPLTLKAGQHIHIIMPDTRKCMALQQAL
QSISKHTLNYTCSSLQGFDPQQAHTDINKADVVIAGNATPNQSAVEIGGM
DDLKNDPQFALSNAQQPKALESLLKVAKKQNKNTVFISLRAPYDIAEFSD
YAHAVLASYAYNIDHDKNDIVTGPAFTALAHVLLGKLPANGTLPVTIKK
>PSHAb0150 nanE, putative N-acetylmannosamine-6P epimerase, NAD(P)-linked, with ribulose-phoshate binding barrel
MSNKNIELESFLVNHLQSSLIASCQPLDDGPMDKVEHIVAMALATVAGGA
KALRIEGIENVRAVAKVSNIPIVGIVKRDLTDTEVRITPFIEDVIGLAEA
GATIIAFDGTDRPRPVDRLTLLNTIHEHGCIAMADCADLAGGKFLHDAGC
TFIGSTLSGYLDLSTTPNEPDYQLVSDLVSAGIKVIAEGRYNSPERAAKA
IELGALCVTVGSAITRLEHITGWFVQSINNAKSDI
>PSHAb0557 ppsA, Phosphoenolpyruvate synthase (Pyruvate, water dikinase) (PEP synthase)
MQDVPRVGGKNASLGEMISNLANAGVQVPGGFATTADAFNEFLDQSGLTA
KIHDILDTLDVEDVNTLAKVGADIRQWIIDTPFQPNLDKAIREAYSQLHG
DTAADVSFAVRSSATAEDMPDASFAGQQETFLNVVGIDSVMVAIKHVFAS
LFNDRAISYRVHQGYDHRGVALSAGIQRMVRSDKSASGVMFSIDTESGFE
DVVFITSSYGLGEMVVQGAVNPDEFYVHKPTLLKNKPSVVRRNIGSKAIQ
MIYSEDKAHGKQVDIVDVAPELSNKFSITDEEVQELAKQAVIIEKHYGRP
MDIEWAKDGNDGKLYIVQARPETVRSNEDANVMERFQLNGTSKVVVEGRA
IGHKIGSGVVRVLNSIKEMDQVQVGDILVTDMTDPDWEPIMKRAAAIVTN
RGGRTCHAAIIARELGIPAVVGCGNATDLITAGQEVTVSCAEGDTGFIYE
GILDFEVLTSRVDEMPELPIKVMMNVGNPDRAFDFARLPHSGVGLARVEF
IINRMIGVHPKALLNFDAQTDALKAEITDMMAGYESPVEFYISKLVEGIS
TLACAFAPERVIVRMSDFKSNEYANLVGGQQYEPEEENPMIGFRGAARYV
SEAFRDCFALECEAIKRVRNGMDMTNIEIMIPFVRTVEEGKRVIELLEEH
GLKRGDNGLKVIMMCELPSNALLAEEFLEHFDGFSIGSNDLTQLTLGLDR
DSGLIAHLFDERDPAIKKLLSMAIKTAKEKGKYVGICGQGPSDHEDFAAW
LVEQGIDSVSLNPDTVLETWLYLAEKLAK
>PSHAb0203 smvA, putative SmvA (YddG) efflux protein
MDFISKNKYTLYGVAAILLWSCLVALLRDISELFSPIGGAAAMYSVSAIF
LILVMGVPKFSGFSKRYLVVGTLLFVSYEICLALSIGMANSRHQAMEMAV
INYLWPTLTILLSIIIGRKKVSYWVYPSMIIAFLGVAWCITGDQEMSVDT
LVTNFADNPATYLMALAAAFIWAIYCVVTQKISNGKNAITLFFTVTAMSL
WAQYGFSNEAPLTFSISSSMTLLLAGVVVGSGYALWNQAIIGGNLMLLGT
LSYFTPVFSTIISALYLSITLSASFWQGVVLVTLGSLICYFVTRDKPQKY
NVEVTT
>PSHAb0208 uxuB, D-mannonate oxidoreductase
MTQHQHTNALVTGLNQQSLAQLPSHVDTPSYDRSAVKAGIVHIGVGGFHR
AHQAVYVNELLKTPGSEQWGICGVGLLEGNRGLRDILKQQDYLYTLTVRH
PDGKIDNKVIGSMIDFLFAPEDKQAVINKLAHSDTKIVSLTITEGGYNFN
PATGEFDYSNPDIINDINNPNDPITAFGYITAALKLRKEQGLGAFTVQSC
DNIQHNGNVTRKMLLAFATEQDKNLSEWIEQNVSFPNAMVDRITPVSKKS
DIDYVVDAYGVSDEWPITCESFTQWVIEDTFSDSRPNWDVVGAQFVTDVT
PYETMKIRLLNAGHSVLGLLGSIHGYGTIDETVSDELFATYLRAFMDKEV
TPNLEPLEGIDLQSYKDTLIERFANPNIKDSLARICSESSAKLPKFLIAT
INENLVQGRDVSLATLVIATWCLYSDKGVSEKGEKLEIQDAMYKELNSYA
QETQTSPIAFLKLTSLFGKLEHNETFTAEYKKSIAALYAPNSKIKAIMQA
VLEQKSN