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Gene list

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COG category: Amino acid transport and metabolism
Gene type: CDS
Genomic element: chromosome 2

Number of genes found: 26

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# Photobacterium profundum, ss9

>PBPRB1341 conserved hypothetical protein
MRIWFGCVAGLAVTLLFGWSYGLFAALLPLFVLTQIDQWNSGILIQLVLG
IVWVSIQVTFIVGFFQPYPVLMTLAVGILLMAKCIAMTHKSSYLFGYTGL
LIGSILLNFGSFNSFDIEEFVMGLWASALVTAPIVAMALYLFPEKSSSTL
VGISPSDSIEKENANTSNKEACTSTASERKIHISNQRKDDIGRVRQAALG
WIVAMAAFILFQVADLSDSLSAQASIFIVLTPMTLIGSLGAAKIRIIGTF
LGCLAGMMVQLSLYTLSNNGVLFLMAYAIAAGIFCKWLASGTIKASIGFS
AMSALTVPLTTSFVPEQQDAFFSICYRFSSIFVAVIGTSLAIWIGHHLLV
RLIQFKEPQCN
>PBPRB1421 hypothetical arginase family protein
MFFKQLNQWFVRVIPNSYHSSTSFRSYTEQSQVGAVLFGVASDLSLGRFR
GRLSDSDGPESICRALKKEYKGSPSFPLYDAGIIDELDGLEFNELQALQY
QKIVDFFDKGHFPVILGGGHEISISSYQALSDYVNQPKHIAHQLNDNNEE
KGRQARVGVINFDAHFELRPTLSPKVGSVFHSIASYCTEHHRPFHYLGLG
ICNRTNSQSSFEYAEKLGCHWLLDKEMTMRNKKIVQNKIDRFLSEIDYIH
ISFDLSVFSATVASGVNLSRVQGVEWSIVEYALKRIISSGKVKILDVVEL
NPEFDYEDQTARIAAKVVSTVLSKQAML
>PBPRB1268 conserved hypothetical protein
MNSHLTITLAGKDHPQLINQLAAKTHELGGKWLVSKISRLDQQLVGIIKI
EIPDAFAEQLESEFNKLSDFYVNVVKSDQPQVFVKTEHITLKVESSDRPG
IVNDITNILQDIGINIDRIENHRIGVPDLGKTLFFAELSIDVPSQTNLEQ
LIESVQQVEGDMRVEVVD
>PBPRB1477 hypothetical protein
MIWIKPQNFIEYWGSLQIVETEHYARFECPEGDGTFSLYLERAEFKNSSV
IYFEHEKLDEWVTELKSKGIIFEQEPTEQSYLWREAVVNDPSGNKIKLYW
AGENRLNPPWRIEK
>PBPRB1416 hypothetical protein
MNTSKVGVIGTSRKEDERRFPIHPEHLLRIPEDLRRQLIFEEGYGEPFGI
SDSDIAALTGGTASRHELLADIGRVIIAKPVLEDLQELREGGTLWGYVHC
VQQEDITQAAIDRKQTLIAFEDMYIWSANGQVGRHTFYKNNEMAGYCAVL
HSLQLKGIDGHYGDQRKTIIFGFGAVSRGAIYALKAHGFRDITICIQRPE
DEVREEVLDCNYVRIRAGSEGEARMVVVDHDGTTRSLTDLISEADIIVNG
TYQNTENPTDFVIEEESACLKPNSLIIDVSCDEGMGFFFAKPTTFKSPMF
KYETIDYYAVDHTPSYLWESATRSISAALIVYLPIVLAGRDSWHQNETIR
KAINIDGGVIQNPSILSFQKRELYYPHGYLNPIESMVLNSIG
>PBPRB1324 putative glycine cleavage system P protein
MTDMTLLNALSDDQDFAGRHNGPNAAQQNIMLKAISAESVEQLIAQTVPA
DIRLPEPMKLDPAQSEADMLTSLKAIASKNIINRSYIGQGYYNNLTPNVV
LRNVLENPGWYTAYTPYQPEISQGRLESLLNYQQMIMDLTSMELANASLL
DEATAAAEAMTLCLRAGKSKSKAFFVSNDLHPQTVDVVRTRAEYIGIEII
TGSVEELDNHDVFGALVQYPGTTGSITDLTDIIEKAHAKKTLVAVASDLL
ALTLLKAPGEMGADVVIGSAQRFGVPMGFGGPHAGFMATKDKHKRTMPGR
VIGVSKDARGNQSLRMAMQTREQHIRREKATSNICTAQALLANMAAFYAL
YHGPEGLRKIGRRVHHLTAILAAGLRNSGIELASDTFFDTITLNTGKKTD
DFYKKALAAGINLRKFDVQLGISLDETTKVSDVEELLAIFTGNKLKASMF
TADIAADEFAAIPESCRRTSKYLTHPVFNEHHSETQMMRYMKKLENKDYS
LTHGMIPLGSCTMKLNAAAEMIPITWPEFGSLHPFAPADQTKGYQELASK
LSEMLCSVTGYDAFSLQPNSGAQGEYAGLIAIQRYHQHNGDSHRNVCLIP
SSAHGTNPASAAMVSMKVVVVGCDEKGNVDVEDLKVKIEKHRDNLSCIMI
TYPSTHGVYEEAVREVCDLVHDAGGQVYLDGANMNAQVGLTNPGFIGSDV
SHLNLHKTFCIPHGGGGPGMGPIGVKSHLAPFLPGHVQSTSDEGQQYAVS
AAELGSASILPISYAYIAMMGEEGLTEATKLAILNANYVMERLRPHYPVL
YRGTEGRIAHECIIDIRPLKEASGISEEDVAKRLMDYGFHAPTMSFPVAG
TLMIEPTESEDLAELDRFCDAMIAIRQEIARVQEGEWPIDDNPLVHAPHT
QADLMETEWNRAYSREIACFPTDHTRASKYWPTVNRVDNVFGDRNLICSC
PSIDSYIED
>PBPRB1264 ALR3187, putative amino acid ABC transporter, permease protein
MMLNKTFSTAAPSVGYRILKPVLSGLLQIAVVTLGLIWLLNAGAEAMNYR
WQWYRIPQYLWFIDDGEWFPAELLEGLFVTLKISAVSLIFTLLIGLVTAL
LRLSDSIVGRGLARGYIELIRNTPLLVQIYLLYFVFGPVLGLERFTTAVL
ALSLFQGAYTAEIFRAGLNNIPKGQFEACSSLGLSAIDGYRFVILPQMIR
RILPPLTNETVSLVKNSSIVSIMAIFDLTTEGRNIVADTAMPFEVWFTVA
GIYLCVTLMLSGFAAWLEHKMNVPTQ
>PBPRB1463 BRNQ, hypothetical branched chain amino acid transporter
MNRKDLIAIGFMTFALFLGAGNLIFPPLMAQQAGEYWLLAIAGFLLTAVG
LPALTIIVLGRLSSADKLTASLPKWMDRSFWILVLTTLGPAFVLPRAVTV
AYEMGIKPFVNGNYLFIFSISFCALTLLLALKPGRLVDYIGKVMTPALIS
MLALLIIAAIINPLGSTSPATEIYKQAPTVNGLVQGYMTLDAIAAVAFGW
VIIQAIKSKGVTSTKAIAKYSRWIAGIYAILMSSCYLAMGYLGATSSNIA
PNALNGGEILTRYAAGEFGQAGQVLLAAITLMACLTTTIGLTNANAQYYK
NTYRIPFKISATLILGLTAIVSNFGLETIIEVSFPAILILCPIAIALILA
TVSLPFPNKPSTTHTVIVLIATLFGTIDALSILDKLPLTVIEPFTKWLPF
YSAHMSWLVPVFITIVISKLLSFRSEKMIPA
>PBPRB1464 BRNQ, hypothetical branched chain amino acid transporter
MKTHDLLAIGLMTFALFLGAGNLIFPPSLGLEAGTNLFPAMVGFLITAVG
LPALTLVVLGRLSSTQNLTNPLPKWLARAFWILLFTAIGPAFGMPRAITV
AYEIGIRPFVNSDHLLLFSIIFSAVTLLLAFKPGHLVDYIGKVMTPLLIL
MLVALACAAIFSPLGVPQAPSFDYQQDAITHGLIQGYMTMDAIAAVGFGW
VIIQAINAKGITEPRAVANTAFKVAIIYAVLMTGCYVAMGYVGATSAPVA
ANATNGGEILAKYVAGQFGIYGQWLLATIIVMACLTTTVGLTNACAEYYK
QTFKTRFPVTAIIVVTLTGIIANLGLEQILAVSLPAILVLCPVAIALVLT
SVVLPSLTLSNTSFTHVVVLFTALLFGGIDALNILEKTPDNIHSLFLQAL
PLYNAHASWLLPCLLILGGSYLKAIKKPLPVDMIN
>PBPRB1415 CV1934, putative homocysteine synthase
MKDETLSIHFGYETDPTTKSVATPIYQTVAYEFDNAQHGADLFNLAVPGN
IYTRIMNPTNDVLEKRMAALEGGVAGLAVSAGSAAINYAILTLAQMGDNI
VATPQLYGGSYTLFAHMLPNQGIEVRFAKDDKPESLAELIDEKTKAIFCE
SIGNPAGNIIDLELVAELAHAQGVPVIVDNTVATPVLCKPIEFGADIVVH
SLTKYVGGHGTTLGGMIIDSGKFPWTEHKDRFPVFNQPEPSYHGVVYTEA
FGEAAFIGRARTVPLRNTGSALSPMNAFMLMQGLETLSLRMERHTENALK
VAEYLSQHDNVEWVNYAGLPDSKHYSLAKKYMKGQPSAILSFGLKGGYEA
GVRFYDALNIFKRLVNIGDAKSLACHPASTTHRQLSEQEQKQAGVSPEMI
RLSVGIEHIDDIIADLEQALNA
>PBPRB1545 EF2567, Hypothetical selenophosphate synthase
MAQVLQTISPLFPEQDYPNLMVGLAVSDDAAVYKINDDVAVIQTLDFFTP
IVDDPYDFGAIAAANALSDVYAMGGQVTLAMNIFCVPVDLPQEVVGQILK
GGADKVREAGAVLVGGHTVEDDEPKFGLSVMGMIHPSKVQTKAAVESGDI
LVLTKPLGTGVISTAAKRGKASQESIQTSTDSMKKLNRNAAQIFVKYPIK
ACTDITGYSLLGHALEMAEKSDVCMHFIADQVPFLLGAEDYAAQGIFPGG
ANRNLEAYKDDIEFAPELDESWQQKLCCPETSGGLLATVPKDCLESLLLE
FSNTGESCWVVGYAESGSGIKVS
>PBPRB1409 GNTP-2, putative DsdX permease
MISRWVSSRVLLLTKTAAELNMDHGTTVYTILEFLGNPITAMFIAAFVAY
YIFGIKQNMGMSVLLEKTEGAFASIANILLIIGAGGAFNGVLKGSGLADV
LAQILFNLDMHPILLAWLVAIILHAAVGSATVAMMGATAIVAPMLPLYPD
ISPEIITLAIGSGAIGCTIVTDSLFWLVKQYCGASMSETFKYYTTATFIA
SFVALGGTFLLSYII
>PBPRB1319 R01549, putative glycine cleavage system T protein
MHCRDAAGLFDVSHMGQLRLHGANAAKAIEALVPVDIIDLPAGKQRYAFF
TNEEGGISDDLMVTNFGDHLFVVVNAACKDQDIAHIQANLPEDVTMELID
DRALLALQGPKAAEVLARLNPAVSDMVFMDATKLELCGVECYVSRSGYTG
EDGYEISVPADTADAFARELLAYAEVEWIGLGARDSLRLECGLCLYGHDL
DPTTTPVEASLLWGISKCRRADGERAGGFPGADLILEQIKTKDVARKRVG
LLGHSKAPVREGSKLFDANDKEVGIVTSGTFGPSKGMPVAMAYVQTALAV
IGTELFAEVRGKKLPMTVEKMPFVPQRYYRG
>PBPRB1263 RA0042, putative amino acid ABC transporter
MLAEESETLRDDPIISFLHVDKWYGDFHALKDICLTINRGERLVICGPSG
SGKSTLIRCINGLEKYNSGQLNVVGQSLDGKHLKAIRGKVGMVFQHFNLF
PHMTVLENLMLAPRRTLKMSKIEAEKLARDYLERVHIGHQADKYPAQLSG
GQQQRVAIARSLCMKPDILLFDEPTSALDPEMIREVLDVMKELVNEGITM
VCVTHEMGFARQAADRVVFMDEGEIVEIAPPATLFDNPKQQRTKQFLEQI
LSY
>PBPRB1408 S2570, putative D-serine dehydratase
MSTLNIQQLVTEFPLVEKLIALDDVSWFNPNITTLAEGLPYVGLDKTDIK
DASDRLKRFAPYLAKAFPETAKTNGIIESDVVAIPAMKTVLEQQYHIAIQ
GTLLLKKDSHLPISGSIKARGGIYEVLTHAEKLAIQAGLLSESDDYSKLF
TDEFRAFFKQFSIAVGSTGNLGMSIGIMSAKIGFSVSVHMSADARQWKKD
KLRSHGVIVVEYKEDYGVAVAQGRKEAEKDPTCFFIDDENSPTLFLGYSV
AGERLKSQFEAMNILVDELHPLFVYLPCGVGGGPGGVAFGLKMAFGDNVH
CIFAEPTHSPCMLLGIHTGLHDEISVQDIGIDNITAADGLAVGRGSGFVG
RAMERLLDGFYTISDERMYHHLGEMSKYEDIQLEPSALAGMLGPVVVSDN
EEYLQRIQMDEQKLKNATHLVWATGGGMVPSEEMASYLAKSGI
>PBPRB1540 SELA, Hypothetical L-seryl-tRNA(ser) selenium transferase
MTINALSAIPQIGKMLEQAFLSPYIERLSQPVVADLVREQVNGYKKDHLR
NPEHIPFSLETLYSRIERACWQVNQQRLQRVINGTGVIVHTNLGRSPLDA
DVWQAVTEVNTHYSNLEIDLTTGKRGKRKGLLQQLMHYLVKGEDTLVVNN
NASSIYLMLHEIAKGKEVIVSRGEQIQIGGGFRIPDILALSGAKLVEVGT
TNITTVDDYLDAVTDNTAMVLIVHTSNFKIRGFTQSPDIKDLADLLPDHV
VLAVDQGSGTTTENLPDEPSVMSYIKAGADLVCFSGDKIIGGPQAGMVTG
KQSLIKRLEKNPMMRAFRPSRIVYSLLEELAVRKLNQLKTGQGIAERSIT
QAEVTLENKAQQLAEGFGERLRIVRSEMTVGGGSLPDQQSPSSSVEVNAI
SLSADKLLEIMRNWPLPVIGVIKHDRVQLNLATISDDEITYLRQQLAALF
DLQLRGSCSNVTDTKKVEAAI
>PBPRB1320 SPYM3_09, putative sodium/alanine symporter
MISAINGVVWGVPMLVMILGVGLFLTFGLKLMPILKLGTGFKLLWTGRIP
EKEENVKGEISPFNALMTSLSATIGTGNIAGVATAIFLGGPGALFWMWCT
ALVGMATKYAEAVCAVKFRETDANGNHVGGPMYYIKNGLSSKWSWLATAF
AIFGSIAGFGIGNTVQSNSVASAIESTFGVSPMISGLVMMVLVGLVLMGG
IKRIADVAGKLVPLMAAFYITAGLVVLMINAAEVPAAVALIFESAFNPVA
AQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTKNPVAQGLV
AMLGTFIDTLVVCSITGLAIVVSGEWTSGATGAALTSAAFASALPGIGNY
LVAIALSIFAFTTILGWSFYSEKCVQYLLGVKAVVPFRVLWILAVPIGAT
SSLEFIWLLADTLNAMMAIPNLIALMLLSPVVFKLTKEYFSNQQKGDEQT
GES
>PBPRB1262 T2118, putative 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
MQKTDDVRISEIKELLPPVAVLERFPATELAAETVYQSRKSIHNILNDED
DRLLVVVGPCSIHDTEAAIEYGKKLKVLREELKGDLEIVMRVYFEKPRTT
VGWKGLINDPYMDNSFKLNDGLRIGRKLLLDLTDMGLPTAGEFLDMITPQ
YMGDLISWGAIGARTTESQVHRELSSGLSCPVGFKNGTDGNIKIATDAIG
SASAPHHFLSVTKYGHSAIVSTLGNEDCHIILRGGKEPNYSSEHVNAVTS
QLGNAGQRKKVMIDFSHANSSKKFERQIIVSEDVGQQVAGGNKDIFGVMV
ESHLVEGRQDIVEGTEPTYGQSITDACIGWADTETVLRQLARDVAKRRQA
>PBPRB1552 TTE1680, Hypothetical aminopeptidase
METLQYTNGWLNLNEERINEINYFCEDYKHFLNKGKTERQCVALCVKQAE
EKGFRPISEFKQLNPGDKVYFVNRKKNVALVVVGKQPISDGIRYVVSHID
SPRLDLKPSPLYEKSELALMRTHYYGGIKKYQWASRPLALHGIVATKSGR
NVDIVIGEDPQDPVFTIPDLLPHLDKKVQRERTATEVLKGEELQIIVGSI
PMEVNDDKIKDKVKHHILTKLFEKYEISEPDFISAELMLVPAGEARDVGI
DGGLLGAYGQDDRICAFTSLEAIFDIAVPEQTAVCFLVDKEEIGSSGSTG
LESRYLEYFTGELLIRQLGNQYNDQMMRRCLWQSYALSSDVNAGLNPLFE
SVHDVQNASKLGYGLVLTKYTGHGGKAGSNDADAEYVAVLRRMFDDKEIK
WQSGLLGKVDEGGGGTVAKYLAHYGINTIDAGAALISMHSPFELSSKFDI
HELYKAYKVFFIDSIKPTEY
>PBPRB1266 VCA1040, putative amino acid ABC transporter, permease protein
MSQSNIKNALKKSTPGSNSPALLPFYSRIKLNKLDWILLATISVFIGWIY
VQSSAGIHYQWRWHKAIELIFSAGKPGELPYFFQGFVTTIRLSLWGMIFA
GLLGLFLGLARRSSLMILRLPAQAYIQLVRNIPPLVFVFIFYFFISSQLV
PAIGLADTLRYHTGDINGLQHFLFGSSKLWENLFSGVLCVGLISAAYIAE
IIRSGLDAIAKGQWEAADSLGLSRWSRFKDVIFPQAFAGVVPPLAGQFIS
LVKDSSIISLISIQEMTFVGSEMANSSGLIFEIWLLVGAGYLVLCLGLSL
LFSRLEKRSQRHLAR
>PBPRB1489 VP1719, hypothetical protein
MILCPKNSSIFNDHGYITYYLSGGMEILNKLLYKAEKRYSNSTITGCMVT
FISIIGASINTNTALSKGILALTDKQISPIAAHSSMRNVNVQFVVEDKYY
KAAICALHSEFINQSENTTRKIA
>PBPRB1487 VP1719, putative aspartokinase
MSYTVEKIGGTSMSAFDAILDNIMLRPKSPYNRVFVVSAYGGITDALLEC
KRSGKPGIYQYIAKRDETWLKAVADLEMRMLLVNENMFADPLNRRRADQF
IKSRITDAVSCITNIIETCQYGQFSLRHYLPQIREFLSSLGEAHSAYNTA
LKLKTLGINATFVDLSGWDNKSYGSLDDVIKRAFTNIDVTKELPIPTLLQ
NADFADSNF
>PBPRB1506 VV20937, hypothetical protein
MKNKTFPYLSGRFFDGISSGLFMMALPWIMLKEPNMGTFVALTALVCTTL
SFLCTPFFSIMTDRHSRKVILILVQIIQSITAMLVGIAYWFDLGSQWLLA
FSQLVFWVSSNIAWNANNAFTQENYAQHEYAKISGYQEVVMQSTTLGAGA
LGIILLEMWGIVEFAAFAAVASGIAAFSYVITPYNRQVRPSFKTSFIKQL
KESKDICTQNPTFYGFLLISCLSYPILTFLGKLVPIWFAELHISGNWIAW
YNIAFGLGSLMTGLLVSRILALVSHRYIMQYSMIILALTLLAMSGMMQPL
YIIVLTIFFGFFNALNRIARTNWMHHTIPMSQRGRVDGGLAMFATLVQSL
SYVLIALLAHVNAIEYGFIIVGLAVLFASCCMMVLGNKIEEKPNIAIER
>PBPRB1323 VVA0692, putative glycine cleavage system H protein
MENTLKFAESHEWVRDNGDGTITMGISNHAQGLLGDVVFVDLPEVGDSVE
AGETFSLVESVKAASDIYAPVTGEIVEINEELEDSPELVNEEPYEGGWIA
KIKISDVEELTKLTAGDKYLESIED
>PBPRB1322 VVA0693, putative glycine/serine hydroxymethyltransferase
MKASYQNHDLEMFFSTNLAQVDGAVNAGIEAELNRQNQQIELIASENIVS
KAVMQAQGTCLTNKYAEGYAGHRYYGGCEHVDEVEKIAIARAKQLFQCEY
VNVQPHSGAQANGAVMLALLQPGDTILGMSLDAGGHLTHGARPALSGKWF
DAVQYGVNKDTLEIDYNQVRELAIEHKPKMIIAGGSAIPRIINFAKFREI
ADEVGAFLMVDMAHIAGLIAAGEHPSPIPHAHVITTTTHKTLRGPRGGMI
LTNLEDINKKINSAVFPGLQGGPLMHVIAGKAVAFGEALEPDFKIYIKNV
ISNAKVLAEVLQNRGCDIVTNGTDTHLMLVDLRPKGLKGNAAENALERAG
ITCNKNGIPFDTEKPMVTSGIRLGTPAGTSRGFGNDEFKQIGEWIGDVLD
GLAANPEDNSEVEKHVKQQVQKLCSRFPLYQ
>PBPRB1265 WS0279, putative amino acid ABC transporter
MKKLLAACLAVMTLMMGTNALAAEKSTLIDIKERGTLRVGLSTFVPWAMR
DKQGELVGFEVDVARRLAKDAGLKVEFIPTAWDGIIPALLAGKFDVIIGG
LSITPQRNMSVLFTSPYAHSGVQLAANKEKSADKLAIADYNKRSVTLSVR
RGAFTVETAKKYFPKAKLRQFDDDAQAFQEVLNGNAHAVLASSPKPEQMA
IQYNEKLFIPLTDRLSRGSEAFAIRHGEFDLLNFFNNWILLRTEDGWLKE
RHDYWFTTLDWQNQISEGQ