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Gene list

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COG category: Amino acid transport and metabolism
Gene type: CDS
Genomic element: chromosome 2

Number of genes found: 22

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# Photobacterium profundum, ss9

>PBPRB0129 hypothetical protein
MEVSSSRSDILLAAKQMLISQIICGAIYLPYVVMSSDLLGIESALIGMAI
AVIPSMMGMITATFKVKLKKDSSISELIRVTRTVKLVYTVVMFILAFRFM
ALSNVIMLSAYGMTFLGCFLTPILNKPQFRMT
>PBPRB0249 ATU4267, hypothetical protein
MLLGISLGTNDLSRAGAFYDRLLGTVGMVRTMEEDDEIGYGSPGGPSCFW
ILKPFDQQPATRGNGTQVTFKAADNDGVEEFYRTALVLGGVDEGTPGYRY
RPRYFGAYCRDLDGNKLHVMYEPD
>PBPRB0012 ATU5339, putative membrane protein
MFYLLPLLTVSIWAGNAIVNKLSFSVIDPGAIAFYRWFFAMLVLTPFLAK
SIWQHRKTIKPYLPKLAFLSLLGMVLNQSLGYFAAATTTATNMALIISLV
PLISMFLSVPLLSQRLSPLAIVGAILSLGGLVLMLSHGNLHQLAAQGITQ
GDGLLLIAAFVYALYCVLLKRWQMPLTNWQSVYVQGVLAVIMLFPMFVSS
ERMAITAEAFPLVMYAAMLGSLIAPWCWLLGIQRLGADRTAMFMNLMPVI
TALIASVVLNEQLESYHYIGGVMVLSGVALAQKKVKARQQKMATA
>PBPRB0046 CJ0087, hypothetical aspartate ammonia-lyase
MQGLAMRKETDVLGEMMLPDEVYYGIQTVRARDNFAVSGRTAVDVPHYLW
AVAAIKQAAAKANCKIGALDATVAKAIVQASQEMMAHRFDDQFPIDIFQG
GGGTSTNMNANEVIANRANEILTGKKGYDVVHPNTHVNMGQSTNDVIPAV
MKMTCRINLHALIAEVAALEVMLEEKTQAFDHVVKLARTCLQDAVPITLG
QQFSGYLHQVRRLHQSLKTASEQTLDLPLGATAVGTGLSTHEGYLEQVYI
ELREISGEQFIAEDNFFDGLQNGDTYLEVAAQLKKLAAFLSKMATDFRLQ
GSGPRAGFNELFLPAVQPGSSIMPGKINPVMPELINQIAYQVIGNDVTIT
MAVEGGELDLNVWEPVIIKALFESCNLLTNAIPLFVEKCLKDLLPNEPVC
REYAEKSTALATVIATLFGYKVGCRIAAKAFEQNLRVRDVVLDEQLLTPE
QADYLLDPMVMTNPKASAAAVTRYQQEMATPQKNLNSEVNTKEPA
>PBPRB0178 CJ0731, putative permease of ABC transporter
MQNVNLKMSATTYHKSVVYGLISLLAIPVIATLVYSLSQRWGATITPDGF
TFDWYLQLWQDPRFIAAFGRSLLLCFISLAVSCALIIPTIFVVFYYFPRL
DSWMNLLILLPFAVPPVVSSVGLLQLYADGPIPIVGTPWVLIGTYFTIAL
PFMYRALANSLQGINLRDLMDAAHLLGASTPRAFVSIVLPNIRKGLLASL
FLSFSFLLGEFVFANILVGTRFETLQVYLYNMRQTSGHFTSALVMSYFFF
TLFLTWLATRFSR
>PBPRB0078 EBIG1973, hypothetical efflux protein
MQSVLLSMSVFAFVGAVSPGPVNIIAASAGAQFGYQKAVFHVLGATFAYT
LIVLLCGLGLEQALIILPEMTGWLTLFGGLFLLYMAFKIATTVGTGNTGD
LKNTVHPTFFEGVLSQGLNPKAWLVAMSGVSLFVLKHSPTMLYLVIFCAI
SFVVCFLGVSVWAVAGNYIGRYLSTTKRQVTFNIMMGLLLGGTVINMFWG
Y
>PBPRB0031 LL2032, hypothetical aminotransferase
MRIKEFGVEIWMNEYENSCVYNLAETCVESLTVEQLLDMSGKRDCIINEL
LPMKLTYGAIEGSDRLRDNVTALYHNQKRSNILITHGAIGANALIHETLI
EPGDRVVSVLPTYQQHYSIPESYGADVQVLKLKEENQFLPDLEQLQKLTT
QNTRLITINNPNNPTGALMDESLLKRIVDIARACDAYILCDEVYRGTDAE
GNGFTASIADLYEKGISTASMSKSFSLAGLRLGWIAAPEELIEKVCIHRD
YNTISVGMLNDHFACIALECRDAILQRSRDICQTNRAVLDAWVKNEPLIS
YVKPTSGTIALLKYDLDMSSRDFCVKLLESKGVMFTPGSVLEMEGYVRIG
YANNPQVLKEGLKKVSEFLAEISH
>PBPRB0030 PA3862, hypothetical protein
MDHFNHSHAPFILDDKAVSELLPKLDVQSLMKELFTAIANQKAVQPNQTL
TPFPDDKGDYITYLGALADEGVFGAKLSPYIVTETTPIITAWTNLMSMKT
GQPLMWCDSGQLTVERTAGTTALAIDCLAPQQSQQLAMVGAGNVALAHLR
HVLGLRNWKTIHVFAPELSDDLERQAIVCAMDPRIEISTSVMDATNQADV
IMLCTSSATPVIAKAHVKASALITSISTNAVNAHEIPPEMLNDIDVYCDY
KETTPSSAGEMCLAVKLHDWDTNNIVGDLADLVSGKCDMPDYKRPVFFRS
IGLGLEDVAIAYGIWQQALKGE
>PBPRB0206 PP3997, hypothetical glycosyl transferase
MTAFSEFIKHVGRGEKGRRSLTQEEAREALNMYLDGKAELLQLAVLLMLQ
RVRCETGEEAAGYIEALRSRISPQWQSIDVDLDWPCFAGKRRQPPWLLLA
AKILAQNGKRVFLHGYAAIDMVKYQIETACPAVNIRQANTVEEAEAILAL
DNICYVPLSSYCDPLVDLLALRSQVGLRTPLNTVARALNPTAAPFSIHGI
FHQGYEKLHADAAALVGDDNMVAFKGEGGESERSPRIACRLAGVINGERF
DEEWPTFLEGASGKHGEISGEYLQKVWLGEEDNSYGSHAVISTLAITLKL
MGLCETQEAALALAEKWWLARHDLNQPNE
>PBPRB0112 RS00779, putative histidine ammonia-lyase protein
MEKIMTNNTQQPITFGAQRLTIEDVMSIANGAPAAMNNTPEYTAKIDRSV
AFLERLLKEEGVIYGVTTGYGDSCTVAIPPNLVDELPLHLTRFHGCGLGE
NLDHQQARAVLATRLCSLSQGFSGVSHDLLNQLVTLINHDISPRIPQEGS
VGASGDLTPLSYVAAVLIGEREVIYKGEIRPTADVFAELGITPIKLKPKE
GLALMNGTSVMTALACIAYKRAEYLAQLATRITAMVSLGMHGNDFHFDEA
LFAVKPHPGQQEIASWLRSDLQADTPPRNSDRLQDRYSLRCAPHVIGVLQ
DTLPWLRQMIENELNSANDNPIIDGENERVLHGGHFYGGHIAMAMDTLKT
AVANIADLLDRQMAQLMDYKFNNGLPFNLTGAEGERKPINHGFKAVQIGI
SAWTAEALKNTMPASVFSRSTECHNQDKVSMGTISSRDCLRVLQLTEQVT
AASLLAATQALEIRKRHNELDENHFSPALKSMTKAVLNDFDFVIEDRPLE
GELRHFIEMIQQQRWDLY
>PBPRB0253 SCM1.35C, Conserved hypothetical protein
MEITLNHTIVSSHDNVSSAKYYERIFGFEFIKVWGHFAVVKVNQTLSLDF
MNASDFSTQHYAFKVSDVQFDEIFARIKNESIPFGSGPVSFDDGKINNND
GGRGVYFKDPNGHMLEIITKDYVLD
>PBPRB0227 SCRA, putative ScrA
MSNTDKELKNVNRRQFIKGTASVAVAGLSTSMFANTVNASTLQTDWQAVS
RSKNDKKFWQKVQKQFVLDKRTTYMNVGTTGSMPKHVLAEFNDNNKTVAK
YPWDMDGKFGSWPYVSDMVSDIASGFGADSHEIILSRNTTDGMCSIINGL
HFEEGDVILTTHHEHVAATSPMNVVKQRFGVNIVEVQLPVYTGSETVSED
DYVEAFAAALNENSNVRLIVFSHITYKTGTTLPAKRICALANQYAVPTLV
DGAHTVGMFDLDFHDIDCDFYAGSGHKWQCGPGATGILYVRDNATRLDEY
WSDCINPLWLINTSLSHAGYLGTQLQMQYIGNDNYPAKQALADSCKMWDE
IGRHRIEERVLHLGALCKLLLAEALPNAKFFSPNVKGLTSGLTTFNPFGF
ESGDLLTEFRNRLRNDYGYIIRTTDFRLYKDDTVETHALRISTHLFHDEE
DVKGLVNAIQELYEYMS
>PBPRB0277 SMB21414, hypothetical amino acid decarboxylase
MSHKFNQYRQLLNSSLDHAVDYLESLPERPIDKQSNSESLRKAIGGTLPI
TGTAPDQVIQKLVTDVEEGLIGSGGPRYFGYAIGGSFPVALAADWLVSAW
DQNVPYYVSSPATSIVEETAAEWMLDLLHLPKTAGVGFTSGAQEAIYTAL
ITARNSLLEKAGWDVAANGLYGAPRIHVVMSDQIHSTIKRALSMIGIGLK
DIKTIPTDQNLRIIPDTLPAILAECDGPTLVCAQAGCIDSGAFDPFDEIA
SSIEAHPNAWLHVDGAIGLWSAASDTQKHLLKGIEKADSWDTDGHKWFNM
PYDSGMVIVKDASLLAKAMGGNNMGDYLTDAIAKPDRNAINFGISASRRA
RGVPVYATIKSLGKEGIQAHLDNCCTLAKRMADKLRNVDGITILNDVVSN
RFSAQFGKGDDAFRDQLTARIVYQLQQDGFCYPSTSGYKGLKTMLFSVLS
CHTTAQDIDASAEKIIEIYHMELEKIQEEHTQSDATLCS
>PBPRB0069 SOA0102, hypothetical transposase
MKATEILYQDLRSYYPQIHSSRLKTLCTFVESGIKDQRVSVTYLGRGLES
GSVTTKKHDIKRADRLIGNAHLHCERHDYYEYMTEQLIGREKYPIILIDW
SPINGQEIYQLLRASIPMQGRGLVLYEKTFHESELNTEKAHQSFLDELEQ
VLPEGCQPVITTDAIYRSPWFKAVELKGWYWIGRVRGQVSLSQDKETWYT
SYQWFKAAKVNKAEHLGVLYYGKVAKFKCEGVLFKRNKKGRSAKKKRGGV
SQRTTDKTHEKDANEAWLLVFNLPPRYKNNANIAVSLYRQRMQIEENFRD
TKNGKLGISLEYANSKSVERFDNLLLIAGLILFIIWCVGRAAVMKKIHYS
LQANSLKYRAVLSTIYIGREVAKDGRYTITIDEYVYVLAHLSELAVSMED
LL
>PBPRB0099 SOA0102, hypothetical ISSod3, transposase
MKATEILYQDLRSYYPQIHSSRLKTLCTFIESGIKDQRVSVTYLGRGLES
GSVTTKKHDIKRADRLIGNAHLHCERHDYYEYMTEQLIGREKHPIILIDW
SPINGQEIYQLLRASIPMQGRGLVLYEKTFHESELNTEKAHQSFLDELEQ
VLPEGCQPVITTDAIYRSPWFKAVELKGWYWIGRVRGQVSLSQDKETWYT
SYQWFKAAKVNKAEHLGVLYYGKVAKFKCEGVLFKRNKKGRSAKKKRGGV
SQRTTDKTHEKDANEAWLLVFKLPPRYKNNANIAVSLYRQRMQIEENFRD
TKNGKLGISLEYANSKSVERFDNLLLIAGLILFIIWCVGRAAVMKKIHYS
LQANSLKYRAVLSTIYIGREVVKDGRYTITIDEYVYVLAHLSELAVSMED
LL
>PBPRB0242 STM3625, putative transport system permease protein
MADISSAEHSATIKRQSALHEKANMTESEWKKAIKFDSVDVGWIVMSIGM
AIGAGIVFLPVQVGVMGLWVFLLSSVIGYPAMYLFQKLFINTLAESKECT
DYPGVITGYLGKNWGIALGALYFIMLVIWVLVYSLAVTNDSASYLHSFGV
TDGHLNDNIFYGLALICILAFIGSKGEKLLFKLSGFMAVTVLLLVAVMGV
LLIARWDMANIPQMGAWGTMLKDAIITLPFTLTSILFIQSLSPMVISYRS
HEKSIEVARYKASRAMKIAFSILFVIVFFFAVSFTLAISQEQAAEAMHKN
ISALAIIAHYFPGSWATTAGIVINIFAVVTSFFGVFLAFQEACRGLAMNI
LLRKYKESQVNKALVNKLVTVFIILLAWGAIAINAPILSFTSICSPVFGL
VGCLIPAYLVYKVPHLAKYKGAATNMIIITGVLLCISPLLAFI
>PBPRB0280 STY2588, hypothetical protein
MSAYPCINIHLDTITQNTKNLVTTCQSHGITPAGVTKLACAYPEVGQAIL
DGGIYLLADSRIANLIKLHHLDAKKMLLRIPAISEADDVVHYADVSLNSE
LVTLEALSNEAIKQHKSHQVIIMHDLGDLREGAFYEEETLALSRKAIALP
GIDLVGLGTNLACYGGVEPTAANQNQLITIAKKIETEHQIKLQYLSGASS
AGLQLMLNGDLPQGINQLRLGASILMGIGLNDDRVPNTRQDTFDLTAEIV
EIKVKPSVPVNSTALDAFGIKPEFIDRGLRRRAICAIGKQDVDIDQITPK
DSNIIVIGGSSDHLILDIDDSKIDYSIGSLVEFELSYGGVLQCMTSEYIT
KRFISSTSVKELLC
>PBPRB0040 STY4732, conserved hypothetical protein
MLRIDSKERKHWRELAAEYGFGFHSMYEDPYWDETAYYQFTLEQIERDIE
DPTEEIHQMCLDVVDTVVRDEYWLRKFQIPEAMWQNVLDSWQRKEPSLYS
RLDFAYDGTGHAKLYENNADTPTSLFETGFWQWLWLEDQVKSGAIRRDAD
QFNLLQELLINRFKELAHSQPGQTLHFSCCHDTEEDRGTVQYMEDCAKEA
GLSTAFVHIEDIGLNNRGEFTDMASRPIRWMFKLYPWEFMFRENYAENLT
DAKVNWLEPMWKSVISNKALLPLLWQKFHNHPNLLPAYFPDDKGLSSLRD
YVIKPLFAREGANISIVQNGKQTLRVDGPYGDEGVIYQAYHPLPKFGDYY
TLIGSWLVNDKPGGISIREDKSKVTQDMSRYLPHIIL
>PBPRB0172 T1016, putative membrane protein
MNKKHLPLLLFCSVCFIWGTTWLAMEVAVDTIPPIFATGLRFLIASPILV
LLSKIFNQPLLFPKGKNKWIAIVAVFYFAIPFTLMIAGEMYISSGLASII
FANMPIAVMITSTLFLGLRLAIHQFIGLFIAVISLFIILSNELGIGGDNL
LIGSGALGLAVAIHAVMYVMVQKHCKDIQVITYNALPSFVAAILLFITSL
AFENINVQAFSSSSLMAVGYLGTFASVGGIVAYFKLGQISTPFTASICFL
IFPLVALALSAATSGAAISEQSILMLLPLLSGILLTKVPLSKFKAARKLV
TSSQ
>PBPRB0228 VPA1512, putative ScrB
MLMTVRKLRKKISHIVFVGAAIIFSQNSLATDLAEIREKGVLRHIGVPYA
NFISYINRDDFQLLSGLDVDIVKGFSESIGVEYQYVPAEWNNVIGKLIGQ
NAQFKNNQIVLGKKSPIEGDIIANGVTVLDWRAELADFSDDYFPSAVWLV
ARADSDLEPIQPTGSIDKDIEKVKKLIKGRDVLTMEQSCLDPNLYNLYET
GANIIEPERSRKLNEMVPAILNKDAESTLLDVADTLIALEKWPGEIKVIG
PISQDQRMAVAFRKSSPELRKAFNQYLATIKEDGTYQKLVEKYYPSVFYF
YGDYFKESNQ
>PBPRB0127 VV21456, putative permease
MLFRYVMTQHRRADLLIVCATLLASAGWIFSKQTIQGLPPFGFIGLRFVL
ASLLILPFCYRLFKQVSLKDIAQSSLVGMLLGAALLTWIYAISVSDTLGE
GAFIMSLSMLLVPLVAWPLFKQKPSRPFWISLPFAIVGLVLLSLSGGGWH
QSVSQVWFLLAAALLALQFNFNSRYAQRIPTLLLTCVQLFVTGVVGLIAS
LMFEQWPQTVNIEIWGWFASSVLIATSIRYVLQTAGQKHTSVANAAIIMV
LEPVWTVFLSILWYGEKMPVEKVIGCSLILFALLLYRGWYTITGKLFK
>PBPRB0179 Z0458, putative ATP-binding component of ABC transporter
MNYVEVSNLSKRFGQNTVFEGINLTIKQGEFVTLLGPSGCGKSTLLRCIA
GLNDVDNGNVIVKGEDITHAAPQTRGIGMVFQSYALFPNMTVWDNIAFGL
KMQKVSAADLKQQVGKVIELVELNGREQYYPHQLSGGQRQRVALARALVV
KPRILLLDEPLSALDARIRKHLREQIRTIQKEMNLTTIFVTHDQEEALTM
SDRIFLMNKGEIVQSGTAEEIYTQPASEFVASFMGNYNLLGAKQVHDIFG
MSINGKLAIRPESIYVREAGRQYGEHISAPVLANVVSHQLLGNVIRYQVV
LSQDETQQPNVAPTQNIIVDMLNRSSERLFEQGTKLELMFNKNEMQEVA