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COG category: Amino acid transport and metabolism
Gene type: CDS
Genomic element: chromosome 1

Number of genes found: 18

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# Photobacterium profundum, ss9

>PBPRA3595 Putative dihydroxy-acid dehydratase
MPHQLERQDEQRNKRIFTVMPKYRSATTTHGRNMAGARALWRATGVKDED
FGKPIIAVVNSFTQFVPGHVHLKDMGQLVAGEIEKAGGIAKEFNTIAVDD
GIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLM
AALRLNIPVIFVSGGPMEAGKTKLSDQILKLDLVDAMIQGADPTVSDEQS
EQIERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSMLATHADREQL
FINAGKRIVDLTKRYYLNDDDTALPRNIANKKAFENAMALDIAMGGSTNT
VLHLLAAAKEGDIDFDMDDIDRMSRLIPHLCKVAPSTPKYHMEDVHRAGG
VYSILGELDRAGLLHNDTHNILGQTFAESLAEYDIAVTESQAVKDFFRAG
PAGIRTTKAFSQSCRWDTLDDDRTNGCIRSKEHAFSQDGGLAVLSGNIAI
KGCIVKTAGVDENSLVFSGPAVVFESQDTAVEGILGGKVKSGDVVVIRYE
GPKGGPGMQEMLYPTTYLKSIGLGKECALITDGRFSGGTSGLSIGHVSPE
AAAGGTIGLVNDGDIINIDIPNRSIELHVDDTELAQRRATADQQGWKPVN
RQREVSYALRAYALLATSADQGAIRDKSKLEG
>PBPRA3400 C3062, putative transport permease protein
MSVLFPIMHFGIGMFRSSPYGWTSQYLFGFFFTYGVYLPFWALWFAHLGV
DASDIGLLLGLGLGVRCVANVVLTPRIHNVEHLIPALRWFTLACLIACVI
YIFCGGSLWALAAVTVLFNLAAGPIIPLSDALANFYAKGKHLDYGRTRLW
GSIAFIAGSTIVGILAAKYGASVIPWVAIAGLVVALLFSMRTPAIVPIET
EHHDQPRPALIDIVKNNSVMRFLIIVALLQGSHAAYYSFSAIYWKEVGYS
EAIIGYLWSFSVVAEVCVFAFSQRLFAKWSVGMMFRLAAVGVLLRWGVTA
TMTELPALVMAQALHGVTFAAAHLAAIRYIQHAKSNQMVALQALYNALPL
GAFMAIMTALSGWLYGLWGANLFWLMAVMGIPVLLMKIESKPHSNDQPTE
LEQPMSVN
>PBPRA3522 DAPF, putative ribulose-phosphate 3-epimerase
MQINFSKMHGLGNDFMVVDCVTQNVFFSPAAIRRLADRHRGIGFDQLLVV
EPPYDPETDFHYRIFNADGSEVEQCGNGARCFARFVWMKGLTNKYQVAVS
TKAGKMLLKLENDNQVTVNMGVPEFEPSKIPFRAKQTEKTYIMRVGERTI
FCGTVSMGNPHCVTVVDDLELTDVDTLGPLIESHERFPERVNAGFMQVVS
RNEVKLRVYERGAGETQACGSGACAAVAVGYLQGLLDENVKVSLPGGDLH
ISWAGEGKSLYMTGPVAHVFDGQIVL
>PBPRA3593 ILVG_1, Putative acetolactate synthase II, large subunit
MTGAELVVHALQQQGITTIFGYPGGAIMPIYDALYDGGVEHILCRHEQGA
AMAAIGMARATQDVAVCMATSGPGATNLVTGLADAFLDSVPMVAITGQVA
SSHIGTDAFQEMDVIGMSLSCTKHSYLVTDINDLAPTLAEAFIVAKAGRP
GPVIVDIAKDVQLAQAPVELLPFIEEPSIPVATPESIAKAQCLLAASQRP
VLYVGGGVQIAKATDTVRTFLKLNPMPAVSTLKGLGTVERHAPHYLGMLG
MHGTKAANLVVQESDLLIVVGARFDDRVTGKLDTFAPHAKVIHLDIDASE
FNKLRIANAPLRGDVNVILPQLELSQDISAWVQHSETLRSDFKWRYNHPG
DLIYAPLLMKQLSDMMPDSSVISTDVGQHQMWAAQHIQPREPQNYITSAG
LGTMGFGLPAAMGAKVARPNDESILISGDGSFMMNVQELGTLKRKQIPVK
MVLINNQRLGMVRQWQSLFFNERHSETILDDNPDFVVLASAFGIPGKTIT
KKEEVEPALREMLASKTAYLLHVLISEEENVWPLVPPGAANQDMLENT
>PBPRA3511 PA1620, hypothetical threonine efflux protein
MNEVTTLFTLVTVHVIALMSPGPDFALVVQNAGRYGRQTGIAIALGLSLG
ILLHSILSLTGASLLIHQQPTLFALLQAAGGLYLLWLGIGAVRSVLMPIF
RPTAHTETVTAPQRIIANRKQALVKGFTTNILNPKALVFFISLLSTIVPV
DMSTSGKITAIAILWITSFLWFAMLAWLLTGKRLQQKIQQWTPYIDGICG
VLFVTIGSMILLNLLVAR
>PBPRA3492 PLU0237, putative glutamate-ammonia ligase
MSVENVLALIQENEVKFIDLRFTDTKGKEQHITIPSHQIDSDFFEDGKMF
DGSSVAGWKGINESDMVMMPDASSAVLDPFTEDSTLNIRCDILEPATMQG
YDRDPRSIAKRAEEFMRSTGLADTVLVGPEPEFFLFDDVKFNTDMSGSFF
KIDDIEAAWNSGSDFEGGNKGHRPGVKGGYFPVAPVDSSQDIRSAMCLIM
EEMGLVVEAHHHEVATAGQNEIATRFNTLTTKADEIQIYKYVVHNVAHAF
GKTATFMPKPLVGDNGSGMHVHMSLNKDGQNLFAGDKYGGLSEMAIYYIG
GIIKHARAINAFANPATNSYKRLIPGYEAPVMLAYSARNRSASIRIPVVP
SPKARRIEVRFGDPAANPYLAFAAMLMAGLDGIQNKIHPGEAMDKDLYDL
PAEEAAEIPQVAESLEIALKNLDEDREFLTAGGVFSDDFIDSYIKLKSED
VEKVNMTTHPLEFELYYSV
>PBPRA3404 PLU4073, putative 3-dehydroquinate dehydratase
MSTVKRILLINGPNLNLLGLREPGHYGHHTLAQLVADLTVKATNLSVTLD
HIQSNAEHELIDAIHQAHGNVDFIIINPAAFTHTSVAIRDALLGVAIPFI
EVHLSNVHAREPFRHHSYLSDKAVGVICGLGPDGYEFALNAAVRRLQSES
>PBPRA3391 PLU4137, putative aspartate ammonia-lyase
MSQMIDLEKNEATLNVATRIEEDLLGERHVPADAYWGIHTLRAVENFNIS
NTTISDVPDFVRGMVFTKKAAAMANKELGAIPSEVGNYIIQACDLILDTG
KCMDQFPSDVYQGGAGTSVNMNTNEVIANLALELMGKDKGEYDVVNPNDH
VNKSQSTNCAYPTGFRVAVYNSIMTMIEAIDYLKGAFDAKDKEFAGVLKM
GRTQLQDAVPMTVGQEFHAYSVLLKEEIKNLKYTADLLLEVNLGATAIGT
GLNAATGYQELAVQRLAEITGLPCTPAEDLIEATSDCGAYVMIHGALKRT
AVKLSKICNDLRLLSSGPRTGLNELNLPEMQAGSSIMPAKVNPVIPEVVN
QVCFKVIGNDTTITFAAEAGQLQLNVMEPVIGQALFESISLLKNACVTLR
DKCVSGITVNKEVCESYVFNSIGIVTYLNPFIGHHEGDIVGKICAETGKN
VREVVLERGLLTEEQLDDIFSVQNLMHPEYKAKRYN
>PBPRA3424 PP4184, putative branched chain amino acid transporter
MSTNVLTGRNIAALGFMTFAMYLGAGNLIFPPFLGFQAGEHFLSGMTGFL
LTGVGLPALALIIVALVKGSDNLTAALPRPLATSFWVMVFIVIGPAFVIP
RAITVAYQFSFAPFIGGDVLVPFSIAFCVITILFSLFPGKLVDTIGKWLT
PALLAILAVMAAFAFLFPAGQVMQAKGPYVDGALAEGLTQGYMTMDALGS
IGFGWVIFRAIKSMGVECPKATAKYTFIAAVMYATAMAAVYLSLAYIGST
SADLGTDFTNGGEILTAFTNHHFGVFGTMLLGLVMILACLTTAIGVATAG
SEFYSRTFSSVSYSRSVWVTMILAGLVANVGLDQLLAVTLPVVVALHPIA
IALLMIAPLRHRITPIAVLMTVAVALIFGCVDAAHILGSMPQAWDTWFTQ
HVPLYHYYAGWIVPTVVMLVAGLVMTRLLKKPVPAAVNA
>PBPRA3544 PRLC, putative oligopeptidase A
MSNPLLSMTVLPPFSLIKPEHIKPAVEQAIADCRVKVEEVLTNSDVASWE
TICIPLAETDDRLSRIWSPVGHLNGVKNSPELREAYESCLPILSDYGTWV
GQHKGLYKAYKAIKVSDEFAALSQAQKKTITDALKDFELSGIGLPAKEQH
RYGEISKRLSELASTFSNNVLDATMGWSKRITDESALEGLPESAIQAAKA
NAEAKDKEGYLFTLEIPSYLPVMTYCANRELRQEMYQAFATRASDRGPNA
GEWDNSEIIAEKLKLSHEIARLLGFNTYSEKSLATKMAESPEQVLGFLNN
LAVRAKPQAEREVAELRDYAKTEFGAEDLEPWDLSFYSEKLKQHRYSISD
EQLRPYFPEKKAVAGLFEVLKRVFGMDVKQREGVEVWDDTVTFYDIFDAT
GELRGSFYLDLYAREHKRGGAWMDECAVRRRCADGSLQTPVAYLTCNFNK
PIGDKPALFTHDELVTLFHETGHGIHHMLTQVDAPSVSGINGVPWDAVEL
PSQFLENWCWEEEALAFISGHFETGEPLPKEMLDKMLAAKNFQSAMGILR
QLEFGLFDFSLYTNYDPEVGAQVLETLFDVKSRVSVVPSPEWGRFPHSFS
HIFAGGYSAGYYSYLWAELLSADAFSRFEDEGIFNQATGADFLHCILERG
GSEEPMDLFKRFRGREPQLDAMLRHCGITG
>PBPRA3523 PSPTO022, putative diaminopimelate decarboxylase
MDYFNYQPNGQLWAEDIALTELAERYGTPLYVYSRATLERHWNAFDQAVI
DHPHLICYAVKANSNIGVLNVLARLGSGFDIVSQGELERVITAGGDPAKV
VFSGVGKTAVEMKRALELGIKCFNVESEPELERLNQVASELGLVAPISLR
INPDVDAQTHPYISTGLRDNKFGIFFERAVEVYRLAHSLPNLNVVGMDCH
IGSQLTNIDPFIDATDRLLALIDTLKAEGIVIKHLDVGGGLGVTYNEEQP
PLPSEYASALLARLGEHSDLELIFEPGRAIAANAGVLLTRVEFLKHTDYK
NFAIVDAAMNDLIRPTLYQAWQNIVPVVPREGEAKTYDLVGPICETGDFI
GKDRELCLAPGDLLAVRSAGAYGFVMSSNYNTRTRAAEIMVDGNTAHVVR
EREKLAELWQSEHLLP
>PBPRA3512 RSC2921, putative gamma-glutamyltranspeptidase
MQWKASCLALLITASLTVTPAIAKQSADSIAPEAVTGLKTQTLEQGSDWM
IASANPYASEAGAAMLRQGGNAIDAMVATQLVLGLVEPQSSGIGGGAFLM
YWDAKKEALTSFDGRETAPYGVTPRLFQDDKGEPLQFFDAVVGGRSVGTP
GTVKLLQHTHQRLGKLPWKALFEPALNLAKNGFIVSPRLAKLVANDQDYL
QRSAEAKAYFFNQDGSPIKAGQNLKNPAYADTLTLIADQGASAFYHGKIA
NDIVKTVRGAKANPGVLNTMDLATYQVKEREPVCAPYRQYSICGMGPPSS
GALTLGQIMGMLSHYPIAEMGPENIQSWRLLGDASRLAFADRGKYMADSD
YVPMPTEGLLAADYIEQRATLLKGDTALATTAAGKPPWSHAMNYALDEAI
ELPSTSHFSIVDKDRNMVSITTTIENGFGSRLMVRGFLLNNELTDFSFRS
HADGVPIANRIEPGKRPRSSMAPTIVMKEGEPYMAVGSPGGSQIIGYVAK
TLVAHLDWGLNLQQAINLPNMNNRFGAFELEQGTTAEQWAPKLEQLGFKV
KVKELNSGVQAIRVDGKSLTGAADPRREGKVIAQ
>PBPRA3596 S3912, Putative threonine dehydratase
MSEVTQAKDAELLSGADYLRNILRAPIYEVAQVTPLQDMDRLSARIGNRI
QLKREDRQPVHSFKLRGAYNMMSQLTPAQRKAGAIAASAGNHAQGLALSG
HKLDVSATIVMPLTTPAIKVDAVRSFGGKVVLHGNNFDEAKAHAEELAQQ
YGYTFIPPFDHPSVIAGQGTIGMELLQQNGHLDYVFVPVGGGGLAAGISV
LLKQLMPNIKIIGVEAEDSACLKAALDAGCPVTLDQVGMFADGVAVKRIG
EETFRLCQQYLDDVITVSSDEICSAVKDIFEDTRAIAEPSGALSLAGLKK
YVEVHQLQDKQLASILSGANLNFHGLRYVSERCELGEKREGLLAVTVPER
PGAFLDFCHILGGRTVTEFNYRYNDDALANVFVGVRLMQGQEELDGIIHD
LRKGGYPVVDLSDDEMAKVHVRYMIGGRPSKPLKERLYSFEFPEYPGALL
KFLNTLGTHWNISLFNYRNHGADFGRVLCGFELEDKDLLSFTSHLHELGY
QWKDETENLAYKFFLAQ
>PBPRA3594 S3914, Putative branched-chain amino acid aminotransferase; 4-amino-4-deoxychorismate lyase
MANTADYIWFNGEMVPWAEANVHVLTHAMHYGTSVFEGIRCYNTPNGPIV
FRHKEHMDRLKNSAKIYRFPIPYSSEELMEICRETIRVNELESAYIRPLG
YVGNVGLGVCPPVDTEMDLIVAAFPWGSYLGEEALESGVDAMISSWNRAA
PNTIPTAAKAGGNYLSSLLVGSEARRHGYAEGIALSVDGYLSEGAGENIF
VVRNGILSTPPATCAILPGITRDSIMVLAKEMGYEIREENIAREALYLAD
EVFMTGTAAEIVPVRSVDQISVGEGKRGPITKEIQAAYFGLFNGTTEDKW
GWLDYVYPKSDK
>PBPRA3571 SO0040, Putative shikimate 5-dehydrogenase
MASSFLDNDHMDKYVVFGNPIAQSKSPFIHTLFARQTAQKMEYTAELAPA
DGFKLAADNFFSAGGRGCNITAPFKEDAYQYATQLSERAKLAGAVNTLKK
LDDGGILGDNTDGEGLVQDLLLNQVELAGKRILLVGAGGAARGVILPLLA
QNPVELVITNRTLSKAQQLADLFAPFGSVSSAAIDTLNQPDFDVIINSTS
AGLSGQLPGLSESLIKHDMVCYDMVYSAQITAFNLWARDLGAGKVIDGLG
MLVGQAAESFMLWRGLRPGAKQVLRELRRILQE
>PBPRA3426 SO0585, putative D-isomer specific 2-hydroxyacid dehydrogenase family protein
MNKVLIVSRQQATYHQLIKQAQLPRLVITDDPKQASIILADPPKIARQLD
SYPALRWLQSTFAGIDALIKPELRQDYELTNIRGHFGQLIAEYVIGLTLN
LTRHFSLYHAQQQVGVWQPQPYRSLTSQTMVILGTGSIGSHLAQVASALG
IKVIGVNRSGICDITAFDQVYSLSKLTETLAMATIVVSTLPATLNTDQLL
NAGTLAHCNNVLLFNVGRGNAVCEHGLLDALEKNSVQHAFLDVFNQEPLA
QDHLFWKHKKITVTPHIAAESFPEQVFDIFQDNYLRFMAHQPLRCKVDFA
KGY
>PBPRA3399 SO2742, putative Signal transduction histidinekinase
MAQGWIVVPVSLAYLGLLFFIAWYGDKKVKWMAKYRPWIYSLSIAVYCTS
WTFYGTVGQASQNAWSFLPIYLAPIIVFTLGWRILARLILIAKREHITSI
ADFIAARYGKSQGLAVLVTIIAVVGILPYIALQLRAITMGIDQIAPDLGS
GIGINEMDTAWLVTLALAAFTVLFGTRHIDTTEHHRGMMMAVAFESLVKL
AAFLIVGVFAVGLLFELPDLQVVKTSYLESSMPNIGSLLIHTMLTMAAII
CLPRQFHTIVVENSRVKDLHKARWIFPLYLVLMGIFVLPLALAGQALMMS
SVSADTYVISLPLQQGAESIALLAFLGGTSAASGMVIVSTIALAIMVSND
LVLPLVLRRLRVSGKNFSAFSGLLLNVRRALILLLLLSAWGFYQILDNIP
SLSAIGLLSFAAIAQFAPALLGGIYWRKGNKKGVYAGLFGGSAIWVITMM
AQTSMLAGNADTNVLLWLLTPPQLPILQAITSVDWGMLLSLLVNIALYTS
VSLVTRSSLTERLQAATFVGAPLPETENASLYQTRVTVAELEMLAARFVG
RKRVHHAFRQFAEQHQAPLLPQQQASGVLIRHTERVLAGVFGASSARLVL
TSALQGRNMQLEEVATIVDEASELFDFSRGLLQGAIEHISQGIAVVDKQL
RLVAWNQRYLELFTFPPSLIQVGRPIADVIRHNAMEGLCGSGDPEKHVAK
RVEHLQRGTAHTSSRVRADGQVIEVQGNPMPGGGFVMSFIDITAFRQAEQ
ALKDANEHLEARVQKRTQELEQLNRRLVNATQQAEQQAQSKSRFLAAVSH
DLMQPLNAARLFSSSLSELAKEDETIKLSRHIESALGAAEDLIGDLLDVS
RLEAGKLQVNVHPFPICEVFDTLSAEFGVLAKQQGIQFAVLESNAVIVSD
PKLLRRALQNFLTNAFRYNPHGKVLLGVRRIKGKLQIEVWDNGPGIPLEK
QADIFDEFTRIQTSGADHGLGLGLAIARGISRVLEHPLSLRSWPGEGTVF
ALSVSRGIVTQKQQTVISQLAAEKAAPLNGVRVLCVDNEPEILLGMETLL
VRWGCDVRLAESVVGAIQQLEDGWVPEFVLSDYHLANNQTGLQVLQQCSL
RLGKSFKGAVISADRTSETQQAVRGHGFSFISKPVKPLKLRALLNQRMKS
AVKS
>PBPRA3466 Y0323, hypothetical protein
MEKEQVKAERKTLVLSLLAGLCGNATLAVLTSSYVTFSIFPVIAFGMALY
CLYQEYLSKPMTEGTPAIAFSCFLVGVFGYSAFLRAQLPEMGSNFLPLMI
SLGLLFWVAYKMGIMKTPAKPAKA