Gene list
Applied filters:
COG category: Amino acid transport and metabolism
Gene type: CDS
Genomic element: chromosome
Number of genes found: 70
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Tropheryma whipplei TW08/27, TW08/27 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | TW570 | WiSP family protein | chromosome | CDS | 617905 | 4671 | - | 0.405267 |
NA | TW575 | putative integral membrane transport protein | chromosome | CDS | 628384 | 1140 | + | 0.495614 |
NA | TW083 | putative hydrolase | chromosome | CDS | 81523 | 1362 | - | 0.4721 |
NA | TW010 | putative membrane protein | chromosome | CDS | 11133 | 210 | - | 0.504762 |
NA | TW150 | putative ABC transporter system integral membrane subunit | chromosome | CDS | 164075 | 966 | + | 0.466874 |
NA | TW135 | putative integral membrane protein | chromosome | CDS | 142512 | 2397 | + | 0.452232 |
NA | TW146 | putative ABC transporter substrate-binding protein | chromosome | CDS | 159968 | 1602 | + | 0.44819 |
NA | TW667 | putative integral membrane sugar transport protein | chromosome | CDS | 758459 | 1233 | - | 0.48013 |
NA | TW046 | putative integral membrane protein | chromosome | CDS | 41326 | 510 | + | 0.472549 |
NA | TW802 | putative chorismate mutase | chromosome | CDS | 910180 | 318 | + | 0.487421 |
NA | TW611 | putative membrane protein | chromosome | CDS | 694598 | 357 | - | 0.417367 |
NA | TW051 | putative integral membrane protein | chromosome | CDS | 43109 | 312 | + | 0.423077 |
NA | TW461 | putative integral membrane protein | chromosome | CDS | 498160 | 768 | - | 0.442708 |
NA | TW204 | putative branched chain amino acid ABC transporter ATP-binding subunit | chromosome | CDS | 242078 | 684 | + | 0.48538 |
NA | TW043 | putative large integral membrane protein | chromosome | CDS | 38634 | 1842 | + | 0.496743 |
NA | TW202 | putative ABC transporter branched chain amino acid transport permease | chromosome | CDS | 240175 | 1095 | + | 0.463927 |
NA | TW065 | putative ferredoxin/ferredoxin-NADP reductase | chromosome | CDS | 55141 | 1344 | + | 0.481399 |
NA | TW289 | putative membrane protein | chromosome | CDS | 328727 | 330 | + | 0.424242 |
NA | TW149 | putative ABC transporter integral membrane subunit | chromosome | CDS | 163138 | 936 | + | 0.46047 |
NA | TW529 | putative peptidase | chromosome | CDS | 567920 | 1341 | - | 0.487696 |
NA | TW703 | putative integral membrane protein | chromosome | CDS | 796846 | 1227 | + | 0.483293 |
NA | TW011 | putative glutamine amidotransferase | chromosome | CDS | 11399 | 639 | + | 0.507042 |
NA | TW352 | putative aminotransferase | chromosome | CDS | 384742 | 1152 | + | 0.460069 |
NA | TW060 | putative oxidoreductase | chromosome | CDS | 48827 | 1137 | + | 0.4635 |
NA | TW062 | putative chorismate binding enzyme | chromosome | CDS | 52002 | 1278 | - | 0.438185 |
NA | TW200 | putative ABC transporter branched chain amino acid binding protein | chromosome | CDS | 237969 | 1158 | + | 0.5 |
NA | TW145 | putative ABC transporter substrate-binding protein | chromosome | CDS | 158391 | 1581 | + | 0.476913 |
NA | TW227 | putative aminotransferase | chromosome | CDS | 254911 | 864 | + | 0.472222 |
NA | TW244 | putative transferase | chromosome | CDS | 270823 | 1176 | - | 0.434524 |
NA | TW014 | putative integral membrane protein | chromosome | CDS | 13628 | 372 | + | 0.481183 |
NA | TW178 | putative integral membrane protein | chromosome | CDS | 220402 | 678 | + | 0.464602 |
NA | TW238 | Xaa-Pro aminopeptidase | chromosome | CDS | 262339 | 1170 | - | 0.465812 |
NA | TW052 | putative secreted protein | chromosome | CDS | 43784 | 432 | + | 0.474537 |
NA | TW203 | putative branched chain amino acid ABC transporter ATP-binding subunit | chromosome | CDS | 241271 | 783 | + | 0.491699 |
NA | TW261 | putative aminopeptidase | chromosome | CDS | 291425 | 1509 | - | 0.484427 |
NA | TW201 | putative ABC transporter branched chain amino acid transport permease | chromosome | CDS | 239174 | 1005 | + | 0.467662 |
adh | TW445 | alcohol dehydrogenase | chromosome | CDS | 485059 | 1071 | - | 0.497666 |
aroA | TW194 | 3-phosphoshikimate 1-carboxyvinyltransferase | chromosome | CDS | 231435 | 1332 | - | 0.448949 |
aroB | TW399 | 3-dehydroquinate synthase | chromosome | CDS | 435142 | 1143 | + | 0.433071 |
aroC | TW397 | chorismate synthase | chromosome | CDS | 433349 | 1203 | + | 0.472984 |
aroE | TW396 | shikimate 5-dehydrogenase | chromosome | CDS | 432281 | 948 | + | 0.454641 |
aroH | TW556 | phospho-2-dehydro-3-deoxyheptonate aldolase | chromosome | CDS | 592766 | 1368 | - | 0.477339 |
aroK | TW398 | shikimate kinase | chromosome | CDS | 434582 | 501 | + | 0.437126 |
aroQ | TW400 | 3-dehydroquinate dehydratase | chromosome | CDS | 436368 | 450 | + | 0.411111 |
asd | TW724 | aspartate-semialdehyde dehydrogenase | chromosome | CDS | 819127 | 1014 | - | 0.454635 |
aspC | TW733 | aspartate aminotransferase | chromosome | CDS | 827185 | 1215 | + | 0.443621 |
atpI | TW337 | ATP synthase protein I | chromosome | CDS | 369348 | 438 | + | 0.413242 |
carA | TW403 | carbamoyl-phosphate synthase small chain | chromosome | CDS | 438740 | 1146 | + | 0.462478 |
carB | TW404 | carbamoyl-phosphate synthase large chain | chromosome | CDS | 439872 | 3312 | + | 0.450785 |
gabT | TW652 | 4-aminobutyrate aminotransferase | chromosome | CDS | 746050 | 1299 | - | 0.488068 |
gcvH | TW658 | probable glycine cleavage system H protein | chromosome | CDS | 750975 | 366 | - | 0.42623 |
gcvP | TW144 | glycine dehydrogenase [decarboxylating] | chromosome | CDS | 155275 | 2907 | + | 0.47678 |
gcvT | TW659 | aminomethyltransferase gcvT | chromosome | CDS | 751396 | 1071 | - | 0.467787 |
glnA | TW509 | glutamine synthetase | chromosome | CDS | 547499 | 1425 | + | 0.476491 |
glyA | TW655 | serine hydroxymethyltransferase | chromosome | CDS | 748409 | 1287 | - | 0.48174 |
hom | TW329 | homoserine dehydrogenase | chromosome | CDS | 360443 | 1470 | + | 0.461905 |
ilvB | TW567 | acetolactate synthase | chromosome | CDS | 604602 | 1746 | - | 0.46449 |
ilvC | TW565 | ketol-acid reductoisomerase | chromosome | CDS | 603297 | 1002 | - | 0.448104 |
ilvD | TW568 | dihydroxy-acid dehydratase | chromosome | CDS | 606392 | 1710 | - | 0.488304 |
ilvE | TW564 | branched-chain amino acid aminotransferase | chromosome | CDS | 602111 | 1086 | - | 0.476059 |
ilvN | TW566 | acetohydroxy acid synthase, small subunit | chromosome | CDS | 604367 | 243 | - | 0.419753 |
lysC | TW725 | aspartokinase | chromosome | CDS | 820137 | 1257 | - | 0.466189 |
metT | TW610 | putative methionine synthase | chromosome | CDS | 691441 | 2469 | - | 0.46294 |
pepN | TW371 | aminopeptidase N | chromosome | CDS | 402731 | 2517 | - | 0.419547 |
proC | TW764 | pyrroline-5-carboxylate reductase | chromosome | CDS | 861255 | 891 | + | 0.461279 |
prsA | TW585 | ribose-phosphate pyrophosphokinase | chromosome | CDS | 657383 | 1047 | + | 0.464183 |
tdcB | TW700 | threonine dehydratase | chromosome | CDS | 791981 | 1284 | - | 0.474299 |
thrB | TW331 | homoserine kinase | chromosome | CDS | 363012 | 1008 | + | 0.486111 |
thrC | TW330 | threonine synthase | chromosome | CDS | 361919 | 1053 | + | 0.481481 |
trpE | TW384 | anthranilate synthase component I | chromosome | CDS | 416640 | 1431 | + | 0.438854 |