Gene list
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COG category: Amino acid transport and metabolism
Gene type: CDS
Genomic element: chromosome 2
Number of genes found: 26
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# Photobacterium profundum, ss9 >PBPRB1477 hypothetical protein MIWIKPQNFIEYWGSLQIVETEHYARFECPEGDGTFSLYLERAEFKNSSV IYFEHEKLDEWVTELKSKGIIFEQEPTEQSYLWREAVVNDPSGNKIKLYW AGENRLNPPWRIEK >PBPRB1416 hypothetical protein MNTSKVGVIGTSRKEDERRFPIHPEHLLRIPEDLRRQLIFEEGYGEPFGI SDSDIAALTGGTASRHELLADIGRVIIAKPVLEDLQELREGGTLWGYVHC VQQEDITQAAIDRKQTLIAFEDMYIWSANGQVGRHTFYKNNEMAGYCAVL HSLQLKGIDGHYGDQRKTIIFGFGAVSRGAIYALKAHGFRDITICIQRPE DEVREEVLDCNYVRIRAGSEGEARMVVVDHDGTTRSLTDLISEADIIVNG TYQNTENPTDFVIEEESACLKPNSLIIDVSCDEGMGFFFAKPTTFKSPMF KYETIDYYAVDHTPSYLWESATRSISAALIVYLPIVLAGRDSWHQNETIR KAINIDGGVIQNPSILSFQKRELYYPHGYLNPIESMVLNSIG >PBPRB1341 conserved hypothetical protein MRIWFGCVAGLAVTLLFGWSYGLFAALLPLFVLTQIDQWNSGILIQLVLG IVWVSIQVTFIVGFFQPYPVLMTLAVGILLMAKCIAMTHKSSYLFGYTGL LIGSILLNFGSFNSFDIEEFVMGLWASALVTAPIVAMALYLFPEKSSSTL VGISPSDSIEKENANTSNKEACTSTASERKIHISNQRKDDIGRVRQAALG WIVAMAAFILFQVADLSDSLSAQASIFIVLTPMTLIGSLGAAKIRIIGTF LGCLAGMMVQLSLYTLSNNGVLFLMAYAIAAGIFCKWLASGTIKASIGFS AMSALTVPLTTSFVPEQQDAFFSICYRFSSIFVAVIGTSLAIWIGHHLLV RLIQFKEPQCN >PBPRB1324 putative glycine cleavage system P protein MTDMTLLNALSDDQDFAGRHNGPNAAQQNIMLKAISAESVEQLIAQTVPA DIRLPEPMKLDPAQSEADMLTSLKAIASKNIINRSYIGQGYYNNLTPNVV LRNVLENPGWYTAYTPYQPEISQGRLESLLNYQQMIMDLTSMELANASLL DEATAAAEAMTLCLRAGKSKSKAFFVSNDLHPQTVDVVRTRAEYIGIEII TGSVEELDNHDVFGALVQYPGTTGSITDLTDIIEKAHAKKTLVAVASDLL ALTLLKAPGEMGADVVIGSAQRFGVPMGFGGPHAGFMATKDKHKRTMPGR VIGVSKDARGNQSLRMAMQTREQHIRREKATSNICTAQALLANMAAFYAL YHGPEGLRKIGRRVHHLTAILAAGLRNSGIELASDTFFDTITLNTGKKTD DFYKKALAAGINLRKFDVQLGISLDETTKVSDVEELLAIFTGNKLKASMF TADIAADEFAAIPESCRRTSKYLTHPVFNEHHSETQMMRYMKKLENKDYS LTHGMIPLGSCTMKLNAAAEMIPITWPEFGSLHPFAPADQTKGYQELASK LSEMLCSVTGYDAFSLQPNSGAQGEYAGLIAIQRYHQHNGDSHRNVCLIP SSAHGTNPASAAMVSMKVVVVGCDEKGNVDVEDLKVKIEKHRDNLSCIMI TYPSTHGVYEEAVREVCDLVHDAGGQVYLDGANMNAQVGLTNPGFIGSDV SHLNLHKTFCIPHGGGGPGMGPIGVKSHLAPFLPGHVQSTSDEGQQYAVS AAELGSASILPISYAYIAMMGEEGLTEATKLAILNANYVMERLRPHYPVL YRGTEGRIAHECIIDIRPLKEASGISEEDVAKRLMDYGFHAPTMSFPVAG TLMIEPTESEDLAELDRFCDAMIAIRQEIARVQEGEWPIDDNPLVHAPHT QADLMETEWNRAYSREIACFPTDHTRASKYWPTVNRVDNVFGDRNLICSC PSIDSYIED >PBPRB1421 hypothetical arginase family protein MFFKQLNQWFVRVIPNSYHSSTSFRSYTEQSQVGAVLFGVASDLSLGRFR GRLSDSDGPESICRALKKEYKGSPSFPLYDAGIIDELDGLEFNELQALQY QKIVDFFDKGHFPVILGGGHEISISSYQALSDYVNQPKHIAHQLNDNNEE KGRQARVGVINFDAHFELRPTLSPKVGSVFHSIASYCTEHHRPFHYLGLG ICNRTNSQSSFEYAEKLGCHWLLDKEMTMRNKKIVQNKIDRFLSEIDYIH ISFDLSVFSATVASGVNLSRVQGVEWSIVEYALKRIISSGKVKILDVVEL NPEFDYEDQTARIAAKVVSTVLSKQAML >PBPRB1268 conserved hypothetical protein MNSHLTITLAGKDHPQLINQLAAKTHELGGKWLVSKISRLDQQLVGIIKI EIPDAFAEQLESEFNKLSDFYVNVVKSDQPQVFVKTEHITLKVESSDRPG IVNDITNILQDIGINIDRIENHRIGVPDLGKTLFFAELSIDVPSQTNLEQ LIESVQQVEGDMRVEVVD >PBPRB1264 ALR3187, putative amino acid ABC transporter, permease protein MMLNKTFSTAAPSVGYRILKPVLSGLLQIAVVTLGLIWLLNAGAEAMNYR WQWYRIPQYLWFIDDGEWFPAELLEGLFVTLKISAVSLIFTLLIGLVTAL LRLSDSIVGRGLARGYIELIRNTPLLVQIYLLYFVFGPVLGLERFTTAVL ALSLFQGAYTAEIFRAGLNNIPKGQFEACSSLGLSAIDGYRFVILPQMIR RILPPLTNETVSLVKNSSIVSIMAIFDLTTEGRNIVADTAMPFEVWFTVA GIYLCVTLMLSGFAAWLEHKMNVPTQ >PBPRB1464 BRNQ, hypothetical branched chain amino acid transporter MKTHDLLAIGLMTFALFLGAGNLIFPPSLGLEAGTNLFPAMVGFLITAVG LPALTLVVLGRLSSTQNLTNPLPKWLARAFWILLFTAIGPAFGMPRAITV AYEIGIRPFVNSDHLLLFSIIFSAVTLLLAFKPGHLVDYIGKVMTPLLIL MLVALACAAIFSPLGVPQAPSFDYQQDAITHGLIQGYMTMDAIAAVGFGW VIIQAINAKGITEPRAVANTAFKVAIIYAVLMTGCYVAMGYVGATSAPVA ANATNGGEILAKYVAGQFGIYGQWLLATIIVMACLTTTVGLTNACAEYYK QTFKTRFPVTAIIVVTLTGIIANLGLEQILAVSLPAILVLCPVAIALVLT SVVLPSLTLSNTSFTHVVVLFTALLFGGIDALNILEKTPDNIHSLFLQAL PLYNAHASWLLPCLLILGGSYLKAIKKPLPVDMIN >PBPRB1463 BRNQ, hypothetical branched chain amino acid transporter MNRKDLIAIGFMTFALFLGAGNLIFPPLMAQQAGEYWLLAIAGFLLTAVG LPALTIIVLGRLSSADKLTASLPKWMDRSFWILVLTTLGPAFVLPRAVTV AYEMGIKPFVNGNYLFIFSISFCALTLLLALKPGRLVDYIGKVMTPALIS MLALLIIAAIINPLGSTSPATEIYKQAPTVNGLVQGYMTLDAIAAVAFGW VIIQAIKSKGVTSTKAIAKYSRWIAGIYAILMSSCYLAMGYLGATSSNIA PNALNGGEILTRYAAGEFGQAGQVLLAAITLMACLTTTIGLTNANAQYYK NTYRIPFKISATLILGLTAIVSNFGLETIIEVSFPAILILCPIAIALILA TVSLPFPNKPSTTHTVIVLIATLFGTIDALSILDKLPLTVIEPFTKWLPF YSAHMSWLVPVFITIVISKLLSFRSEKMIPA >PBPRB1415 CV1934, putative homocysteine synthase MKDETLSIHFGYETDPTTKSVATPIYQTVAYEFDNAQHGADLFNLAVPGN IYTRIMNPTNDVLEKRMAALEGGVAGLAVSAGSAAINYAILTLAQMGDNI VATPQLYGGSYTLFAHMLPNQGIEVRFAKDDKPESLAELIDEKTKAIFCE SIGNPAGNIIDLELVAELAHAQGVPVIVDNTVATPVLCKPIEFGADIVVH SLTKYVGGHGTTLGGMIIDSGKFPWTEHKDRFPVFNQPEPSYHGVVYTEA FGEAAFIGRARTVPLRNTGSALSPMNAFMLMQGLETLSLRMERHTENALK VAEYLSQHDNVEWVNYAGLPDSKHYSLAKKYMKGQPSAILSFGLKGGYEA GVRFYDALNIFKRLVNIGDAKSLACHPASTTHRQLSEQEQKQAGVSPEMI RLSVGIEHIDDIIADLEQALNA >PBPRB1545 EF2567, Hypothetical selenophosphate synthase MAQVLQTISPLFPEQDYPNLMVGLAVSDDAAVYKINDDVAVIQTLDFFTP IVDDPYDFGAIAAANALSDVYAMGGQVTLAMNIFCVPVDLPQEVVGQILK GGADKVREAGAVLVGGHTVEDDEPKFGLSVMGMIHPSKVQTKAAVESGDI LVLTKPLGTGVISTAAKRGKASQESIQTSTDSMKKLNRNAAQIFVKYPIK ACTDITGYSLLGHALEMAEKSDVCMHFIADQVPFLLGAEDYAAQGIFPGG ANRNLEAYKDDIEFAPELDESWQQKLCCPETSGGLLATVPKDCLESLLLE FSNTGESCWVVGYAESGSGIKVS >PBPRB1409 GNTP-2, putative DsdX permease MISRWVSSRVLLLTKTAAELNMDHGTTVYTILEFLGNPITAMFIAAFVAY YIFGIKQNMGMSVLLEKTEGAFASIANILLIIGAGGAFNGVLKGSGLADV LAQILFNLDMHPILLAWLVAIILHAAVGSATVAMMGATAIVAPMLPLYPD ISPEIITLAIGSGAIGCTIVTDSLFWLVKQYCGASMSETFKYYTTATFIA SFVALGGTFLLSYII >PBPRB1319 R01549, putative glycine cleavage system T protein MHCRDAAGLFDVSHMGQLRLHGANAAKAIEALVPVDIIDLPAGKQRYAFF TNEEGGISDDLMVTNFGDHLFVVVNAACKDQDIAHIQANLPEDVTMELID DRALLALQGPKAAEVLARLNPAVSDMVFMDATKLELCGVECYVSRSGYTG EDGYEISVPADTADAFARELLAYAEVEWIGLGARDSLRLECGLCLYGHDL DPTTTPVEASLLWGISKCRRADGERAGGFPGADLILEQIKTKDVARKRVG LLGHSKAPVREGSKLFDANDKEVGIVTSGTFGPSKGMPVAMAYVQTALAV IGTELFAEVRGKKLPMTVEKMPFVPQRYYRG >PBPRB1263 RA0042, putative amino acid ABC transporter MLAEESETLRDDPIISFLHVDKWYGDFHALKDICLTINRGERLVICGPSG SGKSTLIRCINGLEKYNSGQLNVVGQSLDGKHLKAIRGKVGMVFQHFNLF PHMTVLENLMLAPRRTLKMSKIEAEKLARDYLERVHIGHQADKYPAQLSG GQQQRVAIARSLCMKPDILLFDEPTSALDPEMIREVLDVMKELVNEGITM VCVTHEMGFARQAADRVVFMDEGEIVEIAPPATLFDNPKQQRTKQFLEQI LSY >PBPRB1408 S2570, putative D-serine dehydratase MSTLNIQQLVTEFPLVEKLIALDDVSWFNPNITTLAEGLPYVGLDKTDIK DASDRLKRFAPYLAKAFPETAKTNGIIESDVVAIPAMKTVLEQQYHIAIQ GTLLLKKDSHLPISGSIKARGGIYEVLTHAEKLAIQAGLLSESDDYSKLF TDEFRAFFKQFSIAVGSTGNLGMSIGIMSAKIGFSVSVHMSADARQWKKD KLRSHGVIVVEYKEDYGVAVAQGRKEAEKDPTCFFIDDENSPTLFLGYSV AGERLKSQFEAMNILVDELHPLFVYLPCGVGGGPGGVAFGLKMAFGDNVH CIFAEPTHSPCMLLGIHTGLHDEISVQDIGIDNITAADGLAVGRGSGFVG RAMERLLDGFYTISDERMYHHLGEMSKYEDIQLEPSALAGMLGPVVVSDN EEYLQRIQMDEQKLKNATHLVWATGGGMVPSEEMASYLAKSGI >PBPRB1540 SELA, Hypothetical L-seryl-tRNA(ser) selenium transferase MTINALSAIPQIGKMLEQAFLSPYIERLSQPVVADLVREQVNGYKKDHLR NPEHIPFSLETLYSRIERACWQVNQQRLQRVINGTGVIVHTNLGRSPLDA DVWQAVTEVNTHYSNLEIDLTTGKRGKRKGLLQQLMHYLVKGEDTLVVNN NASSIYLMLHEIAKGKEVIVSRGEQIQIGGGFRIPDILALSGAKLVEVGT TNITTVDDYLDAVTDNTAMVLIVHTSNFKIRGFTQSPDIKDLADLLPDHV VLAVDQGSGTTTENLPDEPSVMSYIKAGADLVCFSGDKIIGGPQAGMVTG KQSLIKRLEKNPMMRAFRPSRIVYSLLEELAVRKLNQLKTGQGIAERSIT QAEVTLENKAQQLAEGFGERLRIVRSEMTVGGGSLPDQQSPSSSVEVNAI SLSADKLLEIMRNWPLPVIGVIKHDRVQLNLATISDDEITYLRQQLAALF DLQLRGSCSNVTDTKKVEAAI >PBPRB1320 SPYM3_09, putative sodium/alanine symporter MISAINGVVWGVPMLVMILGVGLFLTFGLKLMPILKLGTGFKLLWTGRIP EKEENVKGEISPFNALMTSLSATIGTGNIAGVATAIFLGGPGALFWMWCT ALVGMATKYAEAVCAVKFRETDANGNHVGGPMYYIKNGLSSKWSWLATAF AIFGSIAGFGIGNTVQSNSVASAIESTFGVSPMISGLVMMVLVGLVLMGG IKRIADVAGKLVPLMAAFYITAGLVVLMINAAEVPAAVALIFESAFNPVA AQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTKNPVAQGLV AMLGTFIDTLVVCSITGLAIVVSGEWTSGATGAALTSAAFASALPGIGNY LVAIALSIFAFTTILGWSFYSEKCVQYLLGVKAVVPFRVLWILAVPIGAT SSLEFIWLLADTLNAMMAIPNLIALMLLSPVVFKLTKEYFSNQQKGDEQT GES >PBPRB1262 T2118, putative 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase MQKTDDVRISEIKELLPPVAVLERFPATELAAETVYQSRKSIHNILNDED DRLLVVVGPCSIHDTEAAIEYGKKLKVLREELKGDLEIVMRVYFEKPRTT VGWKGLINDPYMDNSFKLNDGLRIGRKLLLDLTDMGLPTAGEFLDMITPQ YMGDLISWGAIGARTTESQVHRELSSGLSCPVGFKNGTDGNIKIATDAIG SASAPHHFLSVTKYGHSAIVSTLGNEDCHIILRGGKEPNYSSEHVNAVTS QLGNAGQRKKVMIDFSHANSSKKFERQIIVSEDVGQQVAGGNKDIFGVMV ESHLVEGRQDIVEGTEPTYGQSITDACIGWADTETVLRQLARDVAKRRQA >PBPRB1552 TTE1680, Hypothetical aminopeptidase METLQYTNGWLNLNEERINEINYFCEDYKHFLNKGKTERQCVALCVKQAE EKGFRPISEFKQLNPGDKVYFVNRKKNVALVVVGKQPISDGIRYVVSHID SPRLDLKPSPLYEKSELALMRTHYYGGIKKYQWASRPLALHGIVATKSGR NVDIVIGEDPQDPVFTIPDLLPHLDKKVQRERTATEVLKGEELQIIVGSI PMEVNDDKIKDKVKHHILTKLFEKYEISEPDFISAELMLVPAGEARDVGI DGGLLGAYGQDDRICAFTSLEAIFDIAVPEQTAVCFLVDKEEIGSSGSTG LESRYLEYFTGELLIRQLGNQYNDQMMRRCLWQSYALSSDVNAGLNPLFE SVHDVQNASKLGYGLVLTKYTGHGGKAGSNDADAEYVAVLRRMFDDKEIK WQSGLLGKVDEGGGGTVAKYLAHYGINTIDAGAALISMHSPFELSSKFDI HELYKAYKVFFIDSIKPTEY >PBPRB1266 VCA1040, putative amino acid ABC transporter, permease protein MSQSNIKNALKKSTPGSNSPALLPFYSRIKLNKLDWILLATISVFIGWIY VQSSAGIHYQWRWHKAIELIFSAGKPGELPYFFQGFVTTIRLSLWGMIFA GLLGLFLGLARRSSLMILRLPAQAYIQLVRNIPPLVFVFIFYFFISSQLV PAIGLADTLRYHTGDINGLQHFLFGSSKLWENLFSGVLCVGLISAAYIAE IIRSGLDAIAKGQWEAADSLGLSRWSRFKDVIFPQAFAGVVPPLAGQFIS LVKDSSIISLISIQEMTFVGSEMANSSGLIFEIWLLVGAGYLVLCLGLSL LFSRLEKRSQRHLAR >PBPRB1487 VP1719, putative aspartokinase MSYTVEKIGGTSMSAFDAILDNIMLRPKSPYNRVFVVSAYGGITDALLEC KRSGKPGIYQYIAKRDETWLKAVADLEMRMLLVNENMFADPLNRRRADQF IKSRITDAVSCITNIIETCQYGQFSLRHYLPQIREFLSSLGEAHSAYNTA LKLKTLGINATFVDLSGWDNKSYGSLDDVIKRAFTNIDVTKELPIPTLLQ NADFADSNF >PBPRB1489 VP1719, hypothetical protein MILCPKNSSIFNDHGYITYYLSGGMEILNKLLYKAEKRYSNSTITGCMVT FISIIGASINTNTALSKGILALTDKQISPIAAHSSMRNVNVQFVVEDKYY KAAICALHSEFINQSENTTRKIA >PBPRB1506 VV20937, hypothetical protein MKNKTFPYLSGRFFDGISSGLFMMALPWIMLKEPNMGTFVALTALVCTTL SFLCTPFFSIMTDRHSRKVILILVQIIQSITAMLVGIAYWFDLGSQWLLA FSQLVFWVSSNIAWNANNAFTQENYAQHEYAKISGYQEVVMQSTTLGAGA LGIILLEMWGIVEFAAFAAVASGIAAFSYVITPYNRQVRPSFKTSFIKQL KESKDICTQNPTFYGFLLISCLSYPILTFLGKLVPIWFAELHISGNWIAW YNIAFGLGSLMTGLLVSRILALVSHRYIMQYSMIILALTLLAMSGMMQPL YIIVLTIFFGFFNALNRIARTNWMHHTIPMSQRGRVDGGLAMFATLVQSL SYVLIALLAHVNAIEYGFIIVGLAVLFASCCMMVLGNKIEEKPNIAIER >PBPRB1323 VVA0692, putative glycine cleavage system H protein MENTLKFAESHEWVRDNGDGTITMGISNHAQGLLGDVVFVDLPEVGDSVE AGETFSLVESVKAASDIYAPVTGEIVEINEELEDSPELVNEEPYEGGWIA KIKISDVEELTKLTAGDKYLESIED >PBPRB1322 VVA0693, putative glycine/serine hydroxymethyltransferase MKASYQNHDLEMFFSTNLAQVDGAVNAGIEAELNRQNQQIELIASENIVS KAVMQAQGTCLTNKYAEGYAGHRYYGGCEHVDEVEKIAIARAKQLFQCEY VNVQPHSGAQANGAVMLALLQPGDTILGMSLDAGGHLTHGARPALSGKWF DAVQYGVNKDTLEIDYNQVRELAIEHKPKMIIAGGSAIPRIINFAKFREI ADEVGAFLMVDMAHIAGLIAAGEHPSPIPHAHVITTTTHKTLRGPRGGMI LTNLEDINKKINSAVFPGLQGGPLMHVIAGKAVAFGEALEPDFKIYIKNV ISNAKVLAEVLQNRGCDIVTNGTDTHLMLVDLRPKGLKGNAAENALERAG ITCNKNGIPFDTEKPMVTSGIRLGTPAGTSRGFGNDEFKQIGEWIGDVLD GLAANPEDNSEVEKHVKQQVQKLCSRFPLYQ >PBPRB1265 WS0279, putative amino acid ABC transporter MKKLLAACLAVMTLMMGTNALAAEKSTLIDIKERGTLRVGLSTFVPWAMR DKQGELVGFEVDVARRLAKDAGLKVEFIPTAWDGIIPALLAGKFDVIIGG LSITPQRNMSVLFTSPYAHSGVQLAANKEKSADKLAIADYNKRSVTLSVR RGAFTVETAKKYFPKAKLRQFDDDAQAFQEVLNGNAHAVLASSPKPEQMA IQYNEKLFIPLTDRLSRGSEAFAIRHGEFDLLNFFNNWILLRTEDGWLKE RHDYWFTTLDWQNQISEGQ