Gene list
Applied filters:
COG category: Energy production and conversion
Gene type: CDS
Genomic element: chromosome 1
Number of genes found: 161
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Vibrio parahaemolyticus RIMD 2210633, O3:K6 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
VP0001 | MioC protein | chromosome 1 | CDS | 371 | 435 | - | 0.478161 | |
VP0028 | zinc-binding alcohol dehydrogenase | chromosome 1 | CDS | 25673 | 981 | - | 0.507645 | |
VP0033 | protoporphyrinogen oxidase | chromosome 1 | CDS | 32649 | 528 | + | 0.405303 | |
VP0042 | cytochrome c5 | chromosome 1 | CDS | 49263 | 414 | - | 0.483092 | |
VP0068 | glutathione reductase | chromosome 1 | CDS | 76469 | 1368 | - | 0.489035 | |
VP0110 | cytochrome c4 | chromosome 1 | CDS | 117519 | 618 | + | 0.461165 | |
VP0129 | phosphoenolpyruvate carboxykinase | chromosome 1 | CDS | 139182 | 1629 | - | 0.477594 | |
VP0311 | inorganic pyrophosphatase | chromosome 1 | CDS | 307557 | 531 | - | 0.461394 | |
VP0325 | malate dehydrogenase | chromosome 1 | CDS | 320744 | 936 | + | 0.482906 | |
VP0344 | 3-isopropylmalate dehydrogenase | chromosome 1 | CDS | 338337 | 1092 | - | 0.495421 | |
VP0349 | conserved hypothetical protein | chromosome 1 | CDS | 343119 | 1047 | + | 0.460363 | |
VP0363 | glycerol dehydrogenase GldH | chromosome 1 | CDS | 360773 | 1083 | - | 0.465374 | |
VP0441 | ubiquinol-cytochrome c reductase, iron-sulfur subunit | chromosome 1 | CDS | 443538 | 591 | + | 0.489002 | |
VP0442 | ubiquinol-cytochrome c reductase, cytochrome b | chromosome 1 | CDS | 444128 | 1266 | + | 0.441548 | |
VP0443 | ubiquinol-cytochrome c reductase, cytochrome c1 | chromosome 1 | CDS | 445390 | 738 | + | 0.46206 | |
VP0508 | flavodoxin 2 | chromosome 1 | CDS | 523952 | 519 | - | 0.475915 | |
VP0516 | oxidoreductase Tas, aldo/keto reductase family | chromosome 1 | CDS | 533491 | 1059 | - | 0.458924 | |
VP0566 | ferredoxin | chromosome 1 | CDS | 589239 | 255 | - | 0.435294 | |
VP0583 | malate synthase A | chromosome 1 | CDS | 608715 | 1635 | + | 0.470948 | |
VP0584 | isocitrate lyase | chromosome 1 | CDS | 610468 | 1311 | + | 0.488177 | |
VP0597 | NifU-related protein | chromosome 1 | CDS | 623646 | 384 | + | 0.440104 | |
VP0601 | ferredoxin | chromosome 1 | CDS | 626883 | 339 | + | 0.445428 | |
VP0618 | hypothetical protein | chromosome 1 | CDS | 644656 | 1521 | + | 0.468771 | |
VP0632 | putative Na+/H+ antiporter | chromosome 1 | CDS | 662058 | 1431 | - | 0.487072 | |
VP0652 | GltP | chromosome 1 | CDS | 682237 | 1275 | + | 0.458039 | |
VP0735 | VisC-related protein | chromosome 1 | CDS | 770653 | 1176 | + | 0.463435 | |
VP0835 | flavodoxin 1 | chromosome 1 | CDS | 866623 | 534 | - | 0.447566 | |
VP0842 | citrate synthase | chromosome 1 | CDS | 872495 | 1290 | - | 0.466667 | |
VP0843 | succinate dehydrogenase, cytochrome b556 subunit | chromosome 1 | CDS | 874180 | 393 | + | 0.452926 | |
VP0844 | succinate dehydrogenase, hydrophobic membrane anchor protein | chromosome 1 | CDS | 874566 | 345 | + | 0.428986 | |
VP0845 | succinate dehydrogenase, flavoprotein subunit | chromosome 1 | CDS | 874911 | 1767 | + | 0.481607 | |
VP0846 | succinate dehydrogenase, iron-sulfur protein | chromosome 1 | CDS | 876692 | 711 | + | 0.45429 | |
VP0847 | 2-oxoglutarate dehydrogenase, E1 component | chromosome 1 | CDS | 877572 | 2826 | + | 0.487261 | |
VP0848 | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase | chromosome 1 | CDS | 880426 | 1206 | + | 0.467662 | |
VP0849 | succinyl-CoA synthase, beta subunit | chromosome 1 | CDS | 881826 | 1167 | + | 0.471294 | |
VP0850 | succinyl-CoA synthase, alpha subunit | chromosome 1 | CDS | 882992 | 873 | + | 0.459336 | |
VP0900 | putative oxidoreductase protein | chromosome 1 | CDS | 931371 | 1245 | + | 0.48996 | |
VP0955 | ferredoxin | chromosome 1 | CDS | 996761 | 324 | - | 0.478395 | |
VP0971 | NADH dehydrogenase | chromosome 1 | CDS | 1011891 | 1290 | + | 0.482171 | |
VP0994 | formate acetyltransferase | chromosome 1 | CDS | 1037883 | 2277 | - | 0.458498 | |
VP1011 | isocitrate dehydrogenase | chromosome 1 | CDS | 1058272 | 2226 | + | 0.450135 | |
VP1053 | cytochrome d ubiquinol oxidase, subunit I | chromosome 1 | CDS | 1103588 | 1617 | + | 0.461348 | |
VP1054 | cytochrome d ubiquinol oxidase, subunit II | chromosome 1 | CDS | 1105222 | 1137 | + | 0.452946 | |
VP1134 | conserved hypothetical protein | chromosome 1 | CDS | 1191017 | 1602 | + | 0.450687 | |
VP1160 | NapE protein | chromosome 1 | CDS | 1215592 | 180 | + | 0.461111 | |
VP1161 | cytochrome c-type protein TorC | chromosome 1 | CDS | 1215822 | 1185 | + | 0.458228 | |
VP1162 | trimethylamine-N-oxide reductase | chromosome 1 | CDS | 1217031 | 2463 | + | 0.485993 | |
VP1165 | conserved hypothetical protein | chromosome 1 | CDS | 1222972 | 906 | + | 0.460265 | |
VP1188 | putative ferredoxin oxidoreductase protein | chromosome 1 | CDS | 1248861 | 1056 | - | 0.469697 | |
VP1189 | hybrid cluster protein; similar to prismane-protein homolog | chromosome 1 | CDS | 1249998 | 1662 | - | 0.471721 | |
VP1198 | putative reductase | chromosome 1 | CDS | 1259246 | 771 | - | 0.49546 | |
VP1219 | putative deca-heme c-type cytochrome | chromosome 1 | CDS | 1280689 | 981 | - | 0.485219 | |
VP1221 | putative cytochrome subunit of sulfide dehydrogenase precursor | chromosome 1 | CDS | 1284440 | 624 | + | 0.455128 | |
VP1222 | putative cytochrome c-type protein | chromosome 1 | CDS | 1285086 | 585 | + | 0.466667 | |
VP1235 | iron-containing alcohol dehydrogenase | chromosome 1 | CDS | 1301840 | 1320 | + | 0.469697 | |
VP1249 | transport ATP-binding protein CydC | chromosome 1 | CDS | 1317354 | 1722 | - | 0.48374 | |
VP1250 | transport ATP-binding protein CydD | chromosome 1 | CDS | 1319068 | 1788 | - | 0.469239 | |
VP1258 | malate oxidoreductase | chromosome 1 | CDS | 1329635 | 1689 | - | 0.476613 | |
VP1270 | conserved hypothetical protein | chromosome 1 | CDS | 1343804 | 3039 | + | 0.469233 | |
VP1329 | fatty aldehyde dehydrogenase | chromosome 1 | CDS | 1408415 | 1527 | - | 0.505566 | |
VP1425 | putative alcohol dehydrogenase | chromosome 1 | CDS | 1530652 | 1191 | + | 0.464316 | |
VP1447 | putaive anaerobic dimethyl sulfoxide reductase, subunit A | chromosome 1 | CDS | 1556226 | 2448 | + | 0.489788 | |
VP1448 | anaerobic dimethyl sulfoxide reductase, subunit B | chromosome 1 | CDS | 1558673 | 630 | + | 0.474603 | |
VP1451 | putative ferredoxin-type protein NapF | chromosome 1 | CDS | 1560844 | 498 | + | 0.487952 | |
VP1506 | formate dehydrogenase accessory protein | chromosome 1 | CDS | 1616463 | 834 | - | 0.466427 | |
VP1510 | iron-sulfur cluster-binding protein | chromosome 1 | CDS | 1619004 | 1662 | + | 0.473526 | |
VP1513 | putative formate dehydrogenase large subunit | chromosome 1 | CDS | 1621586 | 2856 | + | 0.486695 | |
VP1514 | formate dehydrogenase, iron-sulfur subunit | chromosome 1 | CDS | 1624453 | 609 | + | 0.490969 | |
VP1515 | formate dehydrogenase, cytochrome b556 subunit | chromosome 1 | CDS | 1625076 | 1053 | + | 0.458689 | |
VP1541 | cytochrome c oxidase, subunit CcoP | chromosome 1 | CDS | 1651739 | 975 | - | 0.471795 | |
VP1543 | cytochrome c oxidase, subunit CcoO | chromosome 1 | CDS | 1652896 | 621 | - | 0.442834 | |
VP1587 | hypothetical protein | chromosome 1 | CDS | 1680424 | 375 | - | 0.346667 | |
VP1596 | conserved hypothetical protein | chromosome 1 | CDS | 1688228 | 243 | - | 0.411523 | |
VP1627 | acylphosphatase | chromosome 1 | CDS | 1725860 | 273 | - | 0.43956 | |
VP1646 | aconitate hydratase 1 | chromosome 1 | CDS | 1762626 | 2592 | - | 0.496142 | |
VP1647 | methylcitrate synthase | chromosome 1 | CDS | 1765445 | 1143 | - | 0.490814 | |
VP1679 | hypothetical protein | chromosome 1 | CDS | 1794768 | 633 | + | 0.4297 | |
VP1703 | aldehyde dehydrogenase | chromosome 1 | CDS | 1812873 | 1521 | - | 0.472715 | |
VP1770 | putative exopolyphosphatase Ppx1 | chromosome 1 | CDS | 1885653 | 954 | - | 0.465409 | |
VP1772 | succinate-semialdehyde dehydrogenase | chromosome 1 | CDS | 1888219 | 1446 | - | 0.51314 | |
VP1776 | aldehyde dehydrogenase | chromosome 1 | CDS | 1892995 | 414 | - | 0.487923 | |
VP1777 | putative aldehyde dehydrogenase | chromosome 1 | CDS | 1893371 | 1110 | - | 0.496396 | |
VP1782 | conserved hypothetical protein | chromosome 1 | CDS | 1897532 | 1485 | + | 0.472054 | |
VP1873 | fumarate hydratase, class I | chromosome 1 | CDS | 1955619 | 1518 | - | 0.478261 | |
VP1919 | hypothetical protein | chromosome 1 | CDS | 2004407 | 1428 | - | 0.47549 | |
VP1924 | thiol:disulfide interchange protein DsbE | chromosome 1 | CDS | 2008912 | 534 | - | 0.425094 | |
VP1927 | nitrite reductase, Fe-S protein (NrfC) | chromosome 1 | CDS | 2012308 | 687 | - | 0.45706 | |
VP1928 | cytochrome c-type protein NrfB precursor | chromosome 1 | CDS | 2012996 | 579 | - | 0.44905 | |
VP1936 | putative iron-sulfur cluster-binding protein | chromosome 1 | CDS | 2024574 | 279 | + | 0.46595 | |
VP1966 | proton/glutamate symporter | chromosome 1 | CDS | 2056746 | 1302 | + | 0.456989 | |
VP1980 | putative Fe-S oxidoreductase family 2 | chromosome 1 | CDS | 2072532 | 2334 | + | 0.481148 | |
VP1990 | hypothetical protein | chromosome 1 | CDS | 2084894 | 1020 | + | 0.473529 | |
VP2005 | putative thioredoxin | chromosome 1 | CDS | 2099298 | 516 | - | 0.445736 | |
VP2006 | putative suppressor for copper-sensitivity B precursor | chromosome 1 | CDS | 2099810 | 2112 | - | 0.495265 | |
VP2011 | tetrathionate reductase, subunit B | chromosome 1 | CDS | 2106084 | 768 | + | 0.516927 | |
VP2014 | putative tetrathionate reductase, subunit A | chromosome 1 | CDS | 2107995 | 3093 | + | 0.509538 | |
VP2015 | putative cytochrome c | chromosome 1 | CDS | 2111252 | 612 | + | 0.482026 | |
VP2016 | hypothetical protein | chromosome 1 | CDS | 2111872 | 1053 | + | 0.491928 | |
VP2082 | acetate kinase | chromosome 1 | CDS | 2188453 | 1197 | + | 0.45614 | |
VP2102 | RnfA-related protein | chromosome 1 | CDS | 2210551 | 639 | + | 0.431925 | |
VP2103 | RnfB-related protein | chromosome 1 | CDS | 2211193 | 597 | + | 0.467337 | |
VP2104 | RnfC-related protein | chromosome 1 | CDS | 2211798 | 2610 | + | 0.489272 | |
VP2105 | RnfD-related protein | chromosome 1 | CDS | 2214407 | 1047 | + | 0.47851 | |
VP2106 | RnfG-related protein | chromosome 1 | CDS | 2215461 | 636 | + | 0.451258 | |
VP2107 | RnfE-related protein | chromosome 1 | CDS | 2216093 | 693 | + | 0.47619 | |
VP2121 | alcohol dehydrogenase/acetaldehyde dehydrogenase | chromosome 1 | CDS | 2225700 | 2703 | - | 0.45653 | |
VP2125 | Na+/H+ antiporter | chromosome 1 | CDS | 2232349 | 1434 | + | 0.460948 | |
VP2150 | putative nitroreductase | chromosome 1 | CDS | 2260973 | 549 | - | 0.464481 | |
VP2217 | thiol:disulfide interchange protein DsbE | chromosome 1 | CDS | 2331921 | 555 | - | 0.454054 | |
VP2300 | cytochrome c554 | chromosome 1 | CDS | 2409696 | 312 | - | 0.5 | |
VP2346 | sodium-translocating NADH-quinone reductase, subunit F | chromosome 1 | CDS | 2457544 | 1224 | - | 0.468137 | |
VP2347 | sodium-translocating NADH-quinone reductase, subunit E | chromosome 1 | CDS | 2458801 | 597 | - | 0.435511 | |
VP2348 | sodium-translocating NADH-quinone reductase, subunit D | chromosome 1 | CDS | 2459405 | 633 | - | 0.445498 | |
VP2349 | sodium-translocating NADH-quinone reductase, subunit C | chromosome 1 | CDS | 2460037 | 786 | - | 0.454198 | |
VP2350 | sodium-translocating NADH-quinone reductase, subunit B | chromosome 1 | CDS | 2460812 | 1245 | - | 0.474699 | |
VP2351 | sodium-translocating NADH-quinone reductase, subunit A | chromosome 1 | CDS | 2462062 | 1341 | - | 0.477256 | |
VP2381 | glycerophosphoryl diester phosphodiesterase | chromosome 1 | CDS | 2497056 | 1056 | - | 0.466856 | |
VP2386 | glycerol kinase | chromosome 1 | CDS | 2501338 | 1518 | + | 0.48946 | |
VP2388 | aerobic glycerol-3-phosphate dehydrogenase | chromosome 1 | CDS | 2503985 | 1560 | + | 0.478205 | |
VP2399 | galactose-1-phosphate uridylyltransferase | chromosome 1 | CDS | 2516621 | 1053 | - | 0.504274 | |
VP2495 | aconitate hydratase 2 | chromosome 1 | CDS | 2630405 | 2598 | - | 0.473826 | |
VP2517 | dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) | chromosome 1 | CDS | 2653957 | 1428 | - | 0.464286 | |
VP2518 | pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase | chromosome 1 | CDS | 2655653 | 1884 | - | 0.492038 | |
VP2519 | pyruvate dehydrogenase, E1 component | chromosome 1 | CDS | 2657556 | 2664 | - | 0.477477 | |
VP2542 | quinone oxidoreductase | chromosome 1 | CDS | 2681890 | 951 | - | 0.495268 | |
VP2543 | oxaloacetate decarboxylase, beta subunit | chromosome 1 | CDS | 2682993 | 1131 | - | 0.488064 | |
VP2544 | oxaloacetate decarboxylase, alpha subunit | chromosome 1 | CDS | 2684133 | 1788 | - | 0.48434 | |
VP2545 | putative oxaloacetate decarboxylase gamma chain 1 | chromosome 1 | CDS | 2685953 | 258 | - | 0.476744 | |
VP2586 | VisC protein | chromosome 1 | CDS | 2730216 | 1209 | - | 0.512821 | |
VP2587 | UbiH protein | chromosome 1 | CDS | 2731474 | 1179 | - | 0.477523 | |
VP2627 | conserved hypothetical protein | chromosome 1 | CDS | 2768485 | 273 | + | 0.443223 | |
VP2630 | succinate-semialdehyde dehydrogenase | chromosome 1 | CDS | 2773653 | 1434 | - | 0.45537 | |
VP2678 | 2-hydroxyacid dehydrogenase family protein | chromosome 1 | CDS | 2826025 | 963 | - | 0.504673 | |
VP2761 | phosphoenolpyruvate carboxylase | chromosome 1 | CDS | 2926805 | 2667 | + | 0.487814 | |
VP2767 | putative malate oxidoreductase | chromosome 1 | CDS | 2935939 | 1278 | - | 0.474178 | |
VP2792 | phosphoribulokinase | chromosome 1 | CDS | 2955706 | 870 | + | 0.491954 | |
VP2795 | succinylglutamate 5-semialdehyde dehydrogenase | chromosome 1 | CDS | 2958639 | 1458 | - | 0.513032 | |
VP2809 | flavohemoprotein (flavohemoglobin) | chromosome 1 | CDS | 2973455 | 1185 | + | 0.464979 | |
VP2822 | iron-sulfur cluster-binding protein | chromosome 1 | CDS | 2986862 | 1128 | + | 0.466312 | |
VP2832 | glycerol-3-phosphate dehydrogenase (NAD+) | chromosome 1 | CDS | 3001202 | 1038 | + | 0.500963 | |
VP2840 | fumarate reductase, flavoprotein subunit | chromosome 1 | CDS | 3007943 | 1800 | + | 0.489444 | |
VP2841 | fumarate reductase, iron-sulfur protein | chromosome 1 | CDS | 3009742 | 741 | + | 0.469636 | |
VP2842 | fumarate reductase, 15 kDa hydrophobic protein | chromosome 1 | CDS | 3010485 | 384 | + | 0.460938 | |
VP2843 | fumarate reductase, 13 kDa hydrophobic protein | chromosome 1 | CDS | 3010880 | 378 | + | 0.47619 | |
VP2865 | thiol:disulfide interchange protein DsbD | chromosome 1 | CDS | 3032469 | 1842 | + | 0.498914 | |
VP2873 | fumarate hydratase, class II | chromosome 1 | CDS | 3040497 | 1386 | + | 0.513709 | |
VP2942 | pyridine nucleotide-disulfide oxidoreductase, class I | chromosome 1 | CDS | 3145812 | 1401 | + | 0.490364 | |
VP2995 | NAD(P)H-flavin reductase | chromosome 1 | CDS | 3198889 | 714 | - | 0.452381 | |
VP2996 | ferredoxin | chromosome 1 | CDS | 3199617 | 270 | - | 0.451852 | |
VP3001 | thioredoxin | chromosome 1 | CDS | 3204384 | 327 | - | 0.443425 | |
VP3052 | FixG-related protein | chromosome 1 | CDS | 3257922 | 1464 | + | 0.480874 | |
VP3054 | thiol:disulfide interchange protein | chromosome 1 | CDS | 3260461 | 603 | + | 0.442786 | |
VP3068 | ATP synthase F1, epsilon subunit | chromosome 1 | CDS | 3277088 | 423 | - | 0.515366 | |
VP3069 | ATP synthase F1, beta subunit | chromosome 1 | CDS | 3277529 | 1404 | - | 0.477208 | |
VP3070 | ATP synthase F1, gamma subunit | chromosome 1 | CDS | 3278968 | 867 | - | 0.469435 | |
VP3071 | ATP synthase F1, alpha subunit | chromosome 1 | CDS | 3279879 | 1572 | - | 0.473919 | |
VP3072 | ATP synthase F1, delta subunit | chromosome 1 | CDS | 3281434 | 534 | - | 0.451311 | |
VP3073 | ATP synthase F0, B subunit | chromosome 1 | CDS | 3281982 | 471 | - | 0.454352 | |
VP3074 | ATP synthase F0, C subunit | chromosome 1 | CDS | 3282524 | 255 | - | 0.443137 | |
VP3075 | ATP synthase F0, A subunit | chromosome 1 | CDS | 3282834 | 813 | - | 0.440344 | |
VP3076 | ATP synthase protein I | chromosome 1 | CDS | 3283655 | 390 | - | 0.474359 |