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Gene list

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COG category: Unclassified
Gene type: CDS
Genomic element: pSF118-44

Number of genes found: 28

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# Lactobacillus salivarius subsp. salivarius UCC118, UCC118

>gid:1156363    DinJ damage inducible protein-like protein
MARIEARIDGTIKSKAKDVLANHGLTISDFMRMTLTTVAHDGLPKYYSIP
NRQLKN
>gid:1156368    hypothetical protein
MAQPVKWPKIPLESEWVHSMFNQTYKQISGYISRKDINEILKFSYSNFFT
KFGVFILAMGFVFGLYVVGTGPAQGDWGETGNRVASILINIVGPLVKISD
GIFFLMLLAWVVIPYYNRGIAAVQGSLIGLVWCLTTFFSLCSLSTIALVI
VQGWISFFIQLAIVLMYFCVSIYMWIMKIHTKETKIGTLKVTIVTLGVML
LINFVMIIYLVTCKHINFYFSLASALIVFYVLLIAIMFYQLDRTY
>gid:1156336    hypothetical protein
MPNSNINESVWKTLIDCETFLKIIPCSHGPHLTREKTATALKTSCLIHYT
GKSKINQEQ
>gid:1156344    hypothetical protein
MSKNFRNVINCFTNGVGYGATTFLLFVAFDGFQSVTSFNVLSVLIISGLI
GVLTLVFDLDNWSYLVELLLHFLGAFSLILVMMWLNHWLSLQNWLNFCIS
FIGIYLIIFFIVKMKIASDVKRVNQKLSERHQKK
>gid:1156352    putative membrane associated transport subunit
MGVQNIKRSSIWKIRLSTATMTLIPAAVGINYVAKAFAEGLKLPVWLGTL
GTFLASMLAGPVAGAISGFINNVIYGLTLSPVSTVYAITSIGIGITVGVL
HAKGWFSSAKKVFVSAIIIAIVSAVISTPLNVIFWGGQTGIPWGDSIFAA
MIANHIPVWISSFTDEFILDILDKVVVAYLAFFIYRQLPQRMIRFFRDDK
>gid:1156321    hypothetical protein
MKNKRYLNKILLTAILVLFGSCISVKADINSNELNAKLNSEITTQKAQLA
NGQLPKANTHQSDGKTIVSSGTMVLTNQDQNKNRNYLPWMSFAATPETVT
TLKYHIGEDYYDGNFRFTFYLDSIEGLAPYAVDAAIVLYTEPSLQGPVSI
NKTNLISKVGNITTGAIGSVEVPAKTTFWAAGGEYGAESTSGNVAFYPIT
QGPIELQNKLAQNFPEYVDPISHKDAESPLRTDWTRLGKSPSWNGRQAFI
NRFNATYGTQSADWWSARQIHHIRPRIYGGTDDFNNLLPVPNANHYLITS
WFRNY
>gid:1156347    hypothetical protein
MCVPNLLQFVPNDYIANNYLKTNFYLKDVLCYRKLVSFHSC
>gid:1156367    hypothetical protein
MDDDESNFSYKTYLWGIVGFIVFALIYTLLVWLPIIKNRLQTGAGNSTLF
WIVNCIGVIPFIAVYGLIKAMFKKWRKEKGSK
>gid:1156335    putative nickase
MAIFHMSFSNISAGKGRSAIASAAYRSGEKLFDDKEGRHYFYARSVMPES
FILTPKNAPEWAGNREQLWNEVEKKDRKSNSRYAKEFNVALPVELSESEQ
KELLTKYVQENFVDQGMVADVAIHRDHQDNPHAHVMLTNRPFNPDGSWGL
KAKTQYIKDENGKQLLTKSGFPKQRKIWLVDWDKKEKINEWRKNWALSVN
QFLAQKNIPDRISEKSFVNQGIQETPTQHEGINSQRKNRKAFNQQVRAQR
NAQAKYHNLDEKIRNHEHFDALTDELSFSEKHTISHLSQQLKTYVDLEHL
DDKQRMLFNWKNSLLIKHAIGEDVTKQLLTIDQQTTSLAQANQLLNKVVE
RATKKLYPELNFEQTTAAERRELIKETNSEQTIFKGSELAEWLADIRSDL
LTQQLLTFTKRPYTSWQLVNQQAQTIEKQLTTVLAKHGHQLDDLRHTDRG
MLAAYQPNELEFISKAVKNLRVMREVKAVVQTQYNSILTTAFPDSDLDKL
EMIDKEQIYTAVVYYDPELKPLSADDLRQLQQQPPVVFTSQQHQAGLNYL
LGKMELKDIQDHRLQRVLKHDGTRQLFIGECGQDSKLDHRQIEMVQARLK
QQTTRFDQYKQDQIKDYQAINYYPTSPKNYLTNILDEALMTILYAKNTDY
LRKQQLRGLKETEWAMTKKQRQHQTRNRHEDGGMHL
>gid:1156322    hypothetical protein
MEIDSIVNSLKTMSQVSNYKIYVSGSLPMNVGFRLKAKATQADLKKFDKI
NYSLPNDYLAFISQINGAELFTDGKYIQKCKIYSIQEVLHWREFLRSSGF
YPEWDKLLPILELQDIGQLILNLERYENQEDYLLYPDESNKYFHIGFTEW
LNNYLLTNGSEFWYMNS
>gid:1156333    hypothetical protein
MSNQYEKLVEQQARLKQKIEREDFKLRQSKYYENRQARKARSRRLIQKGA
LLEKYFQADNLSVEQTEELLKIFANYVNAHKPNKFKNDQPNN
>gid:1156334    hypothetical protein
MSQSNLEKQEAKLKALNQKIKDEKNKIEQRLGKQIISQANLDYANLSNDQ
IKLLAQQFSEFLKVKSVDH
>gid:1156339    hypothetical protein
MIENDRYYRRYVKDVKSGYIFLQTGLVKKAILDSIFEINYRLTIQIAKDK
KFTDQTFFKDTPYTPVFDKTPSKYSKRLIKQIHHLQNLYKDNNISDLVNN
ISAFLKEIDGITDVQKITHDYLNLLKEINYVMPFLSSNKTGYANLINKYD
RLLLLVDLKTSQQNNSTLNYPELDNAKLLSSPYITNEEFEYLVANLTKYL
GLVSKLKNRSLFCFAGQIGKCQNHVQ
>gid:1156366    hypothetical protein
MGKADLLPMGSLVYLKGGDMKLMVITRGPVFEDDKGETVYADYLGAPYHG
GFQPDEGAATGGPYGAAVGFLVGTAYDSFENSAKNHLNFLGKLAGA
>gid:1156323    putative truncated transposase
MPKVELNLEDDELKELLLGDRDKAMQSIMAKILDEILKSEATEQIKARAY
ERSDERTNSRNGYRVCQLTTQVGTL
>gid:1156324    hypothetical protein
MPIASTQSDFRNHIKDYLDKVNDENQTVLIARSNQRAAAVISQEQLNTLL
EAVNAKEDSLDYAITRDKLIEMHILPDDPIVEPTDDYWNSFKPKDNSNQ
>gid:1156348    hypothetical protein
MIEKEKVLSDAPKVLNSDNNPWKVAVEGDSIIGTWKWMDARFFTEGGISD
EDKEFTFTVTLKDNGKWKEVDSTSSKTSSIRMHNGKLSFSKDISFSKGKT
YQKSISFGIGQDKESGKVGIVESRLDTSIIKKSIRDYLKQCGWKKAGLFG
>gid:1156362    hypothetical protein
MAKVIKYTKAFKKQFKKRRQDPKWRSIFKSSLPQELDDQKRSPWKYIIQC
LIEDKTIPDYFYPHTLEGVTMKKQETTRKKNRFDMKRSFRRISAIIATMA
FTTGLAACGSSQSTAPSANKATSSVTAPQGWKKFTSKDLGYSVYFPGVPE
KDTYKDPTGAYARYSTVNDKDHINYAVSVTKFTRKQVEDSKGFNDAQKRK
VLTNVARLLQIDKYSFTTVDGHMAISYTGHDSEDSSVIMRREVVYSSAGL
YGLESFGTSSSEYKQFVDTFRLSKDTQE
>gid:1156320    putative truncated transposase
MQLIMAKILDEILKSEATEQIKARAYERSDERTNSRNGYRVRQLTTRVGT
L
>gid:1156356    hypothetical protein
METHFLRLPAIPRKVTQPISRELSRNSTGKSYSPSKAQEKYKQRKEKQVP
TI
>gid:1156329    hypothetical protein
MAFEDKMDQLRNSLNSNPVTNERPAPRVSKSYTLKQDIANELAKRAKGKE
LTASRYLERLLKKEFNL
>gid:1156361    hypothetical protein
MKSKDFDTRSRFLLRLLLAEIRNKNKNPPGDDGQTDHDPHDGNHPIRGGR
PLGVGRARGENHGGPPFILAYLWKAGRYRRTACIPSWKFQRIRGHRGQRT
SKRPLDA
>gid:1156349    hypothetical protein
MDVGLSFLHDTLPLVNKIGRTIDQFLFLAISRIIDIVYYGYSMIRFTTGD
MTGLGIIRLVMFSNDYQKKEMISYD
>gid:1156365    hypothetical protein
MFRLPYDQAKKLVNRGELFSAPTYNGSTFGSRFISAFLMTVFMGPLTMIL
GIGTSNSLKELFGISIPLISQVITPVITILISVTVIGYWISVIAPRRNIA
SFNMRSNVLLFGLIISVPVVVFPLTFGITVYLYGLPTVILQAILLLIYIL
FKIRSYRNEVREKIFNGQLKKGAIDRFNLKITVISLVVIDLVPATFRFVM
FGHISLKLVLLDMMFQLLMLMAIYLVLVYTYNKLYKASYIVKYAREFQYD
WKIPDKEWWFTADAAAKHPRVYPPVKK
>gid:1156364    hypothetical protein
MFLLKLHDLIKHNYGNGLYSKDYSYRSNNSNSLSDFNKGKFQAQTDYQSG
KAFKHYPKLLFEFLNFVFLRKMQEIVNFINGYNYEMRKLQKMDKN
>gid:1156332    hypothetical protein
MAKTRTYMDKYKFTVAENQRFARANFTKLVHTNARFEGVNTTLPQTQTIM
DGMSVAGVPVEDILTIVNLKRGWQYITAQNAPLTLTMEKQINKIVAAEDA
LVPGELRQGKGGVNLGSEDFFEPPLINEKQEQSFLQKILTDPQTTITDKA
LTVMYHNMRQQIFWDGNKRTATLSANKIMIDGGAGLINVPLDKWDQWNEL
IANYYRTNDMTEIKQWTYDNGIQGLQIRANKELSANELNQMYKQQKNG
>gid:1156331    hypothetical protein
MTKSSKEVETIEQLLADPWAVDIQALWEQAAHNPDPDKRKLFDALYTYVL
DKRQERIINEKHFVI
>gid:1156330  repA  putative plasmid replication initiation protein
MTKSTNFNYYEADNVYGALFFQFPKVLMYGEQYKHLSSDAKLAYMVLKDR
LEYSLRNNWVDEEGHVYFTFTNQELENLFNCHNQKVVKIKKELETAHLLM
QKQLGFNPKTKKNEPNRLYLSKLDVKATDVYLRGEDSPKVSQTLDTSGNV
KITLPQETAQTLDTSGNVKITLPHKSADETAQTLDTSGNVKITHNLYKDY
KNNIDTNRYDIDTQKLDFSTTNFSPAEIEAQNRDLVKHADEFLTDEDNGL
PVFLEPEAVQLLSFWCRTPQQMRRFIGIILNAKYAVEKEHKDLGVWILLD
DPDLKKMMTKTLRRYFNALRSDEKHIKNVENYLYGTMQNLFGVWWNQQAA
REYAAKHPRRTESW