Gene list
Applied filters:
COG category: Unclassified
Gene type: CDS
Genomic element: pDC3000B
Number of genes found: 40
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View as list | ||||
# Pseudomonas syringae pv. tomato str. DC3000, DC3000 >PSPTO_B0048 lipoprotein, putative MQKRLLFSVLLISLSGCSQPTAQFAQEPAGERVDELIRQSASSVSQAQSR LHQTSAVPSFAPVSAQVKPTAKAQAPAVKAPVRPVPVAGG >PSPTO_B0031 conserved hypothetical protein MNGYVVTWTIYTESVGAHKEAALDVAQRFFQARIADGEPDSACTFVVTGM DGQSEKIDLADYLYTD >PSPTO_B0008 ISPsy3, transposase, internal deletion MKPAYPPLLLQMSPAYKPRPLKNLFTANQCWAHLLEEGGWRDIEVESSCV LCGPRMVYTRAVACLTVQGLVNNAQSIAQLRYVRD >PSPTO_B0072 conserved hypothetical protein MQNRQSQGAWEGEQAQMLLALCAAVLLCWMFFDIFVYWTTWTLYWLWKMV DFPFIHAWAGGKINLLADVANHAKAVTLDEWLEVMNATSGILLLFLIPLV IVSSWGLAQHPVLPFRSKRLVNIHTLPGLVSRFAPSVIPVLAASGPDGLM NDTSPSNAWALKPEEFAERYNLVQRKVLDREAARAVFEEQVGDVHDGLLD LTPYERALLAVFGLQVFLNDRKAATRLLDDLNRSCMIKGLLRRKTFSLTP LYGLADAGFDRVAKAPGVSEWLQSHRSMRTALVALYGRDLRLAPARFRWL KGVNRTLWYALHSADTAKVFVEGAGVQAQARAEVHARKLGLPRPGLMVTQ AIDGLQAELESIGLVFARHVITPKRREASDLPVMTAVYAAQPPVGDEPSE >PSPTO_B0051 traI protein MKKSILTLVLLQGLQGCGHTPPSTPADTPAPLESYLVPADPPSADVTESR RQLLEESGRNTGFRGGKAERVWELRQALEGQIGRLNTLYDFRTLISREGW LPPVIDEAVDVAHITPRQIRTASHVYEIIVPERFVSNPPSWRTWLMAGLS SSGPDETVAVTPENRLQKALWQAAVRQGWGEGRQSADQTLEANFNRLTRD YRGMLMYSQLLRQGFITAPVVTDQQQTVTGDRQKLTTGDRVRSLKENAGF VPDKTQWHPVIRKVQP >PSPTO_B0070 hypothetical protein MPSQRGVHSMMPNAIHHNPDPRYLCGLIDQAGLSRRGAAQLIGMSWSGFR NYLRDESHYLYREADYRVQFALECLADAKVLRKKETGEKS >PSPTO_B0015 hypothetical protein MPRYKLSPAVKRGAKYLEGCQFLCPQEIWSFIIQVEVSPTLLTTLEQVNE LSKKRVLEDDKNEADCLGREYSRERMDLLMLLHAAVEATETANTVAKR >PSPTO_B0035 mobilization protein MobB, putative MSKSTARQATVRIEIRCTEEDAALIREKALAAEISVSDLMRRAALNRKIK TPTDKKLMAALLQLGGLQKHLFNQMQDSMTTDLSKQFSDVLVAIRNAVNA IDLSQTRIK >PSPTO_B0034 hypothetical protein MAKTRLYTQHDLAAAREFLDGLPSLKVDKFQRFGPEASVSEKLYAALHDE DFTLTDILHFLEKHGFSSTVDKLRTMRRVMFTLDIDQPESRDPSRCIDIS RMRVHTWIKRKKSR >PSPTO_B0029 hypothetical protein MLTFKHDLADAVVRYELWDNGFEGLGERQFDNCFEMGDSAEVIAELITTA RREGFVEKIQTWCGNESFARWCSYADRQGDLFAA >PSPTO_B0001 RepA protein, putative MSHDHAISLARATSPTANADPLASSTHLPPARFFEDGTALNRLLLEAPYM ARCSDDKTATRVRPREYALRYPYMQVNRPGMVSWLVFDLDHANALAWDDA GLPAPNLMVRNRKSGHSQLFYAVPSVCTTENARTKPIQYMKAIYAAFAAR LDADVDYHGGPVAKTPGHPWWETTEFHSHVYELGELASAVELTVKPWATG PKLDQVSHSRHCILFEQLRYFAYSIVNRERELGSFESFMRSLDAYAYNHN SFLKQGFSENLPLSSIRATVKSVGRWTWDRYTGDRRCHRGAMQLDGSLSL TERQSLAAKRTNELRHKATESKIRAACRQLQDQGKALVRSAIAKLAGVSV RTVASYTHILTEVSQPSTVSVLRATRQPAKVATGADGPVDSTTPQPASGQ AANRRAPGVQSGVHQISAVPKGPQAGEPLKKEHDDCSCIGISIIPIQGNP PKKAPSA >PSPTO_B0007 PilM protein, putative MNIYWLAMVVITAVLGMVYEKTHQAEQNSQTVEISLIARNVLVYRNALAE YAYTHKAASGTVADNQLDLPTWYARYPGVDGVIDAGRSYAFYGSPQPSLV SEMINLTGGSLAICTASSGRLLTLSSGYVGVTLPAAVPTGAAVAYQ >PSPTO_B0053 hypothetical protein MSFWCSSVPPVWQTKGLLDAASDPLCAKREGIEMSNEFEEIDEEIETLRC LLAGSRDRIKFLQGEIARFESIFEPTHLMCLRGGEKLLELCAPDGKFIGV SWNDMAQVLAAMVQASPIGSGKAPKIVDSLQAEIEQLKAELAGSEKDSRE QIDQVKKAYEFLMLCRQDKTDTAIDAGAMRDANEWLKVAAENLGAALCKP AKRGPAMTEPLVQQAQAHREVSSALEQSAVS >PSPTO_B0055 hypothetical protein MCQNAQQCCSTPDECKAFRDIEEQIGHCTPDQAWGMYFVSTGSVRENIRL AVMKHIAQGNKALLVEFPELAPAKKGDHESG >PSPTO_B0016 conserved domain protein MPNKAPKQSLALGRRRRALDHDSQARRVSALLALYGKNSPPPILQVIAAD GINAITSAASQDAACKAYSRTMIGVRVQIAADCLDPREEALLEASLSCND LQSKWHRPAIIAFFDRD >PSPTO_B0020 hypothetical protein MAMKFGRAHCEELKKLLSPYQARDLYTNEDGEHYAQELTFLCEDQRCRAL LTPVGIYMARKSKRALHFRTKDTHASDCDFLQPGASSGPSRSPAGQEDDF KPSDFPTELDLSPCPRKGAAGGGETTTSGTDDETGSSVATSTSGGSRRKT STRTRYLDLVVDCYLSEDNASKNQLLTIADKTKTFTRFFKKIQYFQDETG LIYHGLIDDLRLYAGKGVGLRFTELVWVNKKRYRIWAHVPQKRIDESRRR KAFLTEIDELEKAIKAGEQVHAFFVGAYPLRSTVENRDGSQFEVYRAELS SIDHLSLVFAEPNQR >PSPTO_B0002 ISPsy3, transposase MKPAYPPLLLQMSPAYTPRPLKNLFTANQCWAHLIEEGGLRDIEVESVTK MLACGTSILGVKHYTCGNHSCPHVKYLCNTCSCRACPSCGKKATDQWIAN QQHRLPECTWQHLVFTLPDTLWPLFFHNRHWLDALCRLAVDNLLYAGRRR GVEVGVFCAIHTYGRRLNWHPHIHVSVTLGGIDDAGVWKDLSFHPSALRR RWMWNVRQYLLSQWEHTTVPPENAHLQSENDWRHLVLNAGGQHWHIHLSK KTKNGKKTVNYLGRYLKKPPISGSRLAHYTSGATLSFTYLDHRTKTYQQE TLSQTDMLRRVVQHIPEKHFRMIRYFGFLANRVCGRQLPRVYEAIRMERR GKAPKLYFAQMSKAFLHRDPFSCVLCGARMVYTAAIAGLTVQGLINNAQS IAQLRYVPA >PSPTO_B0033 hypothetical protein MDKKKKITLDQVEVARQALAALPDLSQDRMSKGQFLSALADRFHTLSQEK GYSLLAIQEALRTIGVRTSPARIALLVTEYARRSKKREHSSKH >PSPTO_B0023 hypothetical protein MTAKSAERDVAISELANHLERDLMPCPAGRTALLTWIEKKLANIALNPVP TAADATWLIESAYIQWAAAQPKH >PSPTO_B0027 hypothetical protein MIVDPDLPGLATKITQNYSNAQIAQLIRMISPVSPCALMAADEFERVMAV LAGQNRRRAFSDRSISAARLVLVMGASVSEAALETGLTRQVVHRLMARIR ARLEDLPADWVKVEAWLPPAAAGDVLALAQSLRSAQSQ >PSPTO_B0030 conserved hypothetical protein MRMSSNFRNPCMIRSDVPLSNDQIAHYVPSIFAEEAHDSRSARYLYIPTV QVLDALRAEGFEPFMACQTRVRDQGKREHTKHMLRLRHASQILDQEANEV ILLNSHDGSSSYQMIGGKFRFVCANGLVLGDVAADQKVRHSGRGDVVHDV IEGAFEVLKHFEQIDHITADMKHQQLDQDEQEAFALAALAYRYDPAEGPA PVTPSQLLMPRRREDRSSDLWTTFNRVQENTIKGGLTGRNKQGRRTTTRA VNGIDQDVKLNRALWVLAQAMGEHRKAA >PSPTO_B0032 mobC protein MAKQKTFTQQDLEAARQKLADLPDLSKDKMSQAEVLQSLKEQIVELCSAK GYSVSEVKQALADVGLNVSVREITDLTTKRKRAAPRAKPQVA >PSPTO_B0037 hypothetical protein MGVRQLPPAYLDLTDKDLPILSSDAGYLIGEKTVSSELVESVLSRQFDTK HANYSSHSSAKIATGSKVY >PSPTO_B0071 surface exclusion protein, putative MKVQRLKTAKEGWLVVFKGLYLLAFPFLLIFAILFLIAASGSTGEDAYGF SVFAALFAAPVLVSLTVFIHGILSRRRLLKRITTAIKAAQFFEPDVANEI YHEGDGKYLGIDTQNGTILYVHRIRKGQVDVVALTMDDWTDREVEGNGML RLYTKFPDLPRIEIATPWAQRWYDTLGAMEHKQKQYSTPQPFNRYVHDHL EALERDLNVQIPRLA >PSPTO_B0003 conserved hypothetical protein MNRLHKTSLLAAILTASPCIMAANAHAMSCPVPQSVKYVNGIYIAPETFA GWEGNWVSQPHKKHSIKEFSTALYLSVDKSQKGGTLTNCSYSLSGDNGVI DLEYRKSGNENRLKTLIVSIEGQHNWIKERGAVGIQGYECTKSASECQFV PLRLNED >PSPTO_B0028 hypothetical protein MPRSIYRQAHGERCAAKPAGDTGSTGSDGKRSAQAERPEALEPACRRGLK PEGSRRAGFMAWLDAQHESPALSAARGTRISGCQRSSCTEA >PSPTO_B0006 hypothetical protein MGALEPFTFQIWFSQERDRPVLVRPIMPFAAQAVPAVATPLS >PSPTO_B0050 traH protein, putative MKYSLWAAPAAALLLSGCQSFCEKPPAAPTPSATAAPVLDRVALQQETLW MEGAINTRSTLPTDAIRARSDLVAVDWSGDAIELLSHLARQRGQTFAWTG VRLPLPVNLKVNGISYANLLRLIEMQTAWRATLTQLPGQLTLAFAQAEPT KKAGGRQ >PSPTO_B0074 conserved hypothetical protein MRTTVTIDDALYQRALEVADPAMDKADLFREAVQTFVRIQAAKRLMALGA TLPTMEDIARRHEKAQ >PSPTO_B0044 hypothetical protein MIIDEDEVRVEIKELMDLIRLDEKYASLLSNGIFPIDHEAIEFNYQRRFR ILEISRKYGLG >PSPTO_B0047 hypothetical protein MPPRLYHFPRFPISPPGLARRCFFASSQPLGVPMASSEDEATTKTSSVYI RPIRVEALNKAAIRVSYETNSSRQISPSELARYLIDNFLEAAIQKMVDDS KR >PSPTO_B0058 traL-1, traL protein MKKSMCGALLMVVCCLPVVGNAAVCRSGQAASVGSQTAYERAKKASDVWA ERERTVSDELQDCLSRIRTTSISLPSFPSLEDLMNQVADQVCQAAVDKIN SHIPSGSDPWQSVGGSL >PSPTO_B0059 traM-1, traM protein MEESLEIPHLPTAEDQHTFEHAMQLQRDRALGAAFAHRCLTAVLWMAPAL VLSVSVNGYLGWQVAHPPVKYFAAEGGRVTKIIPTDKPGHSRRDVSAFGA DTIRQSFTLDFVHYRDQMTQLGERYSEVGFQDYYKALVASNLLKAVKDQR MNLWVDVGPGVIRGSGTIGDKFAWEYQYPVTLKLDGQQSGSPPQRFIFTL RIQQTDVRVKNAGLEVTQVITTNAN >PSPTO_B0060 traN-1, traN protein MKTSIALALWLAASGYAWADETVSPEAAPAKSAVPPSAPVTPAAGAAPSG WATGVGVNPAAQKAGSPAQGNGPVNAAPAQQPSGNDPLPPPPSELFQKAQ DSVSPLTPQEIRQLRGQVGEVDKAMAAPQVAIVPRISAQTVNLSPGASLP LVRTAVNYPTSLTFIDSTGAPWNLGAAPISGNPDITPYYVPNSPVMVLYA AKPFASGNVTVYLKGLAVPIMLYVSSGESDTKAQTWAVDARLDLRVPRRG PGAQPGAAPEVRIGLHDRVLQGFLDGVPPKEAKQLKTTGNVPDTTVWQMG DDLYIRTRADIRDEFESTLSSADGTHLWKLPVTPYVSFSVMGHTAALNVA LE >PSPTO_B0062 traP-1, traP protein MSEFSPAEPKASTIEMPAPTQAPSRSVWQRPIVMGLSLPWLIGIALVLAL AGWYLFGPEKTASVNRLAFENDFEQQPLPAEQSSTPPVAAAAESDLGQFK NEVAAMIGGVRTYAEVNRTAIQRLSETIKTQGVAQQALQQQLAEAQAQNS VLSARLSFLEGRPGATTTTQQASKPVAKTRSPLNGMRVQAIQNGMAWVYW QDKTWAVSPGEKLGQVTVTGINPQAREVLTSAGTIK >PSPTO_B0063 traQ-1, traQ protein MDGSTDAIQMLVNLSHNLLTSLVNFAFTLGSLFAVTGAVSYLATHASAAR KAPGHAEGGGKVIAVLLLCGGLAGLDQMIGAAARQLGWQGATFDAISYVD VGTFGVAADAANAVLSLVRMLGVWFALQGMLSWKRSFKDGHTGLSASQDV SSGTLKFVLGVFCVCNPYLLSALQKTLGLL >PSPTO_B0064 traR-1, traR protein MAMSKDVMLCAAVRLSIFKDGLRQHILKGLAAAIAANPVLAFAGAGGADI AGMGNSAAVGAKSLQKNALTIAQFVGVVFVITGLVAAKNKKDNPQIKTGH IVGSILFGVCLAVIPEIIKRSQAQVGLAPVDVG >PSPTO_B0066 traU-1, traU protein MPSLIRWVEDLITETSRFAVSRDLPDYCDLNTVLRLTDDDRTRHPALNAP YVLVNDDGDYCSVYAVAGSFCDTDEAAPLEAPYSWAGRLERMMHALTAHY RRHGHKISLVFDDDPDRGREDVERLLAPQYASVKRTGIDLTPILDENVEK LAPWVSRERCYLVCYTGRKTLSAHELIDENRRIKQLIGQSPDARYGQNPV LAEMAGLKIRHDAFMSAVEAAFKDDGQGVLLELLDAHAVGQALRSQVDRL GTSEHWYPLLPDDPITPHGVRNGDDHTPFLAPQLKFQLMNQDMETNGNKL CVNGMWHGTLSVVLGPQTPQTFAKLKALVPRGVPWRVRMDLMPGGMKSLG MKKGTLDFMAFVPPLRPIWNSIETLTKVEQQEPVCVMTIMASTWGDSQAA VTRHLTLLTQAFQAWGVCEVTQTFGNPVRAWASTLVASSKGSGPNLLYPP LSEALNLLPLTRPASAWEEDGNALFATLDGKLYPVGLATPKQNKLTSVVT GSSGQGKSVLLNKLGNVTVSSAQQRLPFMAGVDKGFSMQGQVALLRDSLP PERKDEVVGIVLQNSPKHCRNLFDIQLGARFPIAPERNWIISMLTAMCID PSTGNPPNERDTRQILDRVISMAYTANAEKSPRRWGRGVVPEVDTALDKS GLIERYPAQWWDSSTWYEVRDLLFEAGFVKEAQLAQFEAVPELADMTTFL NHEDVQSAYGRVQRDGSQELLLEYLHRCMTDACREFKMLAGRTQFLISPR TRVIAIDLNNVMGDNTTNAGHLKTGIMFLFAGQVAGGDFVLPQYRDELLE AVPTLYHPMHLDRLEQLDQEVKTKIYDELHNAKQVPFIFPMLETQDREQR KFGIRTVLSSQYVSDFPDAILNSANSLYMMEVDPKDEKLLTDTIKVPKVT LQRFQRLGSGPAADGSGVPFLGVFRIKGGGTLARILKNAMGPLELWALGS SPTDSALRRLLYDAVGGATARAILAEAFPQGTAEKLIALRQKQAGEADSN NVIGTLANELIKRRGYNI >PSPTO_B0068 traX-1, traX protein MKTEPDTTKHEDEQSPPDDKHSGTPLRRAGHVGLSILNPFSDLAVIYRRG IKPTAQKLKLLKTLLTPASATTEADAVGVSWVQAVERSSRSVEQLVRSYQ RIRAAWWCLMASGGALSLFLLIMLLLANLSLPSGTFLRAAVTLLLLMALA SWGFAQTLIATYRLWQLRERRVSVAERGTFEDFLIENRWCRQVLTLGHFG >PSPTO_B0069 traY-1, traY protein MNLLKRFWWVGLLLVFSVPAMADSVDYQTIAAAAQKPNDLSRQALVMIFG QVAVDPFAPSQPTLIGSLFAIINGFLAVLAMFWFLTITMKTIVKAGHQGQ FFAGGRSALYPIMTFGGFIMILPTQSGWSLAQLVMLWATSTMGIGSANLL TDKAVDMMDSGYSMVTQPTAPVTRGAARGIFEMNLCKYAINRELQALYGD GEANTPLITTKGGNGQYDTGNGSAVCGSAKTPNTGRTGTWNLLFDSDVDT SGVITAQHQALDTMQSTLDQAAQAFVDTYLSKRDQDVGSFQDAETQIQNA AAAYENTVNQAINKIDFKDTLQSQLSSQIKSSGWVALGSWYHTFATANNK TNDVASSTPVVTGMSNLGEHGTGDLYNQVFAAYKSQVQNSTYTAPLGTQT AKDDGAAATAKDPNSVFVNVFKSPMQGLTNFFATKRVGTEADFSNQVNPL IKMQTIGDYTLGVTETLMAAYAGTWAAASSASNSPLGWGAKIFAVDLGAV VKDVLGALAPMFYFVMFALLAIGFSLAVFLPAVPFLFWMMGVFNWVVSVL VGCAAGPMWAATHLGAEEDKGSRSAYGYIFLIDMMLRPSLMVLGFFFASV AVAAGGTILNLLFASALANANADSIMGLFKMIGWLMIYARIATFGVTRLF GLQASLADYVISFLGGREGANLMGGMVDNMKGMFGAAGSGAQRTPGVKMQ PRKPGAGGHGDGIQ