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Gene list

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COG category: Unclassified
Gene type: CDS
Genomic element: pDC3000B

Number of genes found: 40

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# Pseudomonas syringae pv. tomato str. DC3000, DC3000

>PSPTO_B0048 lipoprotein, putative
MQKRLLFSVLLISLSGCSQPTAQFAQEPAGERVDELIRQSASSVSQAQSR
LHQTSAVPSFAPVSAQVKPTAKAQAPAVKAPVRPVPVAGG
>PSPTO_B0031 conserved hypothetical protein
MNGYVVTWTIYTESVGAHKEAALDVAQRFFQARIADGEPDSACTFVVTGM
DGQSEKIDLADYLYTD
>PSPTO_B0008 ISPsy3, transposase, internal deletion
MKPAYPPLLLQMSPAYKPRPLKNLFTANQCWAHLLEEGGWRDIEVESSCV
LCGPRMVYTRAVACLTVQGLVNNAQSIAQLRYVRD
>PSPTO_B0072 conserved hypothetical protein
MQNRQSQGAWEGEQAQMLLALCAAVLLCWMFFDIFVYWTTWTLYWLWKMV
DFPFIHAWAGGKINLLADVANHAKAVTLDEWLEVMNATSGILLLFLIPLV
IVSSWGLAQHPVLPFRSKRLVNIHTLPGLVSRFAPSVIPVLAASGPDGLM
NDTSPSNAWALKPEEFAERYNLVQRKVLDREAARAVFEEQVGDVHDGLLD
LTPYERALLAVFGLQVFLNDRKAATRLLDDLNRSCMIKGLLRRKTFSLTP
LYGLADAGFDRVAKAPGVSEWLQSHRSMRTALVALYGRDLRLAPARFRWL
KGVNRTLWYALHSADTAKVFVEGAGVQAQARAEVHARKLGLPRPGLMVTQ
AIDGLQAELESIGLVFARHVITPKRREASDLPVMTAVYAAQPPVGDEPSE
>PSPTO_B0051 traI protein
MKKSILTLVLLQGLQGCGHTPPSTPADTPAPLESYLVPADPPSADVTESR
RQLLEESGRNTGFRGGKAERVWELRQALEGQIGRLNTLYDFRTLISREGW
LPPVIDEAVDVAHITPRQIRTASHVYEIIVPERFVSNPPSWRTWLMAGLS
SSGPDETVAVTPENRLQKALWQAAVRQGWGEGRQSADQTLEANFNRLTRD
YRGMLMYSQLLRQGFITAPVVTDQQQTVTGDRQKLTTGDRVRSLKENAGF
VPDKTQWHPVIRKVQP
>PSPTO_B0070 hypothetical protein
MPSQRGVHSMMPNAIHHNPDPRYLCGLIDQAGLSRRGAAQLIGMSWSGFR
NYLRDESHYLYREADYRVQFALECLADAKVLRKKETGEKS
>PSPTO_B0015 hypothetical protein
MPRYKLSPAVKRGAKYLEGCQFLCPQEIWSFIIQVEVSPTLLTTLEQVNE
LSKKRVLEDDKNEADCLGREYSRERMDLLMLLHAAVEATETANTVAKR
>PSPTO_B0035 mobilization protein MobB, putative
MSKSTARQATVRIEIRCTEEDAALIREKALAAEISVSDLMRRAALNRKIK
TPTDKKLMAALLQLGGLQKHLFNQMQDSMTTDLSKQFSDVLVAIRNAVNA
IDLSQTRIK
>PSPTO_B0034 hypothetical protein
MAKTRLYTQHDLAAAREFLDGLPSLKVDKFQRFGPEASVSEKLYAALHDE
DFTLTDILHFLEKHGFSSTVDKLRTMRRVMFTLDIDQPESRDPSRCIDIS
RMRVHTWIKRKKSR
>PSPTO_B0029 hypothetical protein
MLTFKHDLADAVVRYELWDNGFEGLGERQFDNCFEMGDSAEVIAELITTA
RREGFVEKIQTWCGNESFARWCSYADRQGDLFAA
>PSPTO_B0001 RepA protein, putative
MSHDHAISLARATSPTANADPLASSTHLPPARFFEDGTALNRLLLEAPYM
ARCSDDKTATRVRPREYALRYPYMQVNRPGMVSWLVFDLDHANALAWDDA
GLPAPNLMVRNRKSGHSQLFYAVPSVCTTENARTKPIQYMKAIYAAFAAR
LDADVDYHGGPVAKTPGHPWWETTEFHSHVYELGELASAVELTVKPWATG
PKLDQVSHSRHCILFEQLRYFAYSIVNRERELGSFESFMRSLDAYAYNHN
SFLKQGFSENLPLSSIRATVKSVGRWTWDRYTGDRRCHRGAMQLDGSLSL
TERQSLAAKRTNELRHKATESKIRAACRQLQDQGKALVRSAIAKLAGVSV
RTVASYTHILTEVSQPSTVSVLRATRQPAKVATGADGPVDSTTPQPASGQ
AANRRAPGVQSGVHQISAVPKGPQAGEPLKKEHDDCSCIGISIIPIQGNP
PKKAPSA
>PSPTO_B0007 PilM protein, putative
MNIYWLAMVVITAVLGMVYEKTHQAEQNSQTVEISLIARNVLVYRNALAE
YAYTHKAASGTVADNQLDLPTWYARYPGVDGVIDAGRSYAFYGSPQPSLV
SEMINLTGGSLAICTASSGRLLTLSSGYVGVTLPAAVPTGAAVAYQ
>PSPTO_B0053 hypothetical protein
MSFWCSSVPPVWQTKGLLDAASDPLCAKREGIEMSNEFEEIDEEIETLRC
LLAGSRDRIKFLQGEIARFESIFEPTHLMCLRGGEKLLELCAPDGKFIGV
SWNDMAQVLAAMVQASPIGSGKAPKIVDSLQAEIEQLKAELAGSEKDSRE
QIDQVKKAYEFLMLCRQDKTDTAIDAGAMRDANEWLKVAAENLGAALCKP
AKRGPAMTEPLVQQAQAHREVSSALEQSAVS
>PSPTO_B0055 hypothetical protein
MCQNAQQCCSTPDECKAFRDIEEQIGHCTPDQAWGMYFVSTGSVRENIRL
AVMKHIAQGNKALLVEFPELAPAKKGDHESG
>PSPTO_B0016 conserved domain protein
MPNKAPKQSLALGRRRRALDHDSQARRVSALLALYGKNSPPPILQVIAAD
GINAITSAASQDAACKAYSRTMIGVRVQIAADCLDPREEALLEASLSCND
LQSKWHRPAIIAFFDRD
>PSPTO_B0020 hypothetical protein
MAMKFGRAHCEELKKLLSPYQARDLYTNEDGEHYAQELTFLCEDQRCRAL
LTPVGIYMARKSKRALHFRTKDTHASDCDFLQPGASSGPSRSPAGQEDDF
KPSDFPTELDLSPCPRKGAAGGGETTTSGTDDETGSSVATSTSGGSRRKT
STRTRYLDLVVDCYLSEDNASKNQLLTIADKTKTFTRFFKKIQYFQDETG
LIYHGLIDDLRLYAGKGVGLRFTELVWVNKKRYRIWAHVPQKRIDESRRR
KAFLTEIDELEKAIKAGEQVHAFFVGAYPLRSTVENRDGSQFEVYRAELS
SIDHLSLVFAEPNQR
>PSPTO_B0002 ISPsy3, transposase
MKPAYPPLLLQMSPAYTPRPLKNLFTANQCWAHLIEEGGLRDIEVESVTK
MLACGTSILGVKHYTCGNHSCPHVKYLCNTCSCRACPSCGKKATDQWIAN
QQHRLPECTWQHLVFTLPDTLWPLFFHNRHWLDALCRLAVDNLLYAGRRR
GVEVGVFCAIHTYGRRLNWHPHIHVSVTLGGIDDAGVWKDLSFHPSALRR
RWMWNVRQYLLSQWEHTTVPPENAHLQSENDWRHLVLNAGGQHWHIHLSK
KTKNGKKTVNYLGRYLKKPPISGSRLAHYTSGATLSFTYLDHRTKTYQQE
TLSQTDMLRRVVQHIPEKHFRMIRYFGFLANRVCGRQLPRVYEAIRMERR
GKAPKLYFAQMSKAFLHRDPFSCVLCGARMVYTAAIAGLTVQGLINNAQS
IAQLRYVPA
>PSPTO_B0033 hypothetical protein
MDKKKKITLDQVEVARQALAALPDLSQDRMSKGQFLSALADRFHTLSQEK
GYSLLAIQEALRTIGVRTSPARIALLVTEYARRSKKREHSSKH
>PSPTO_B0023 hypothetical protein
MTAKSAERDVAISELANHLERDLMPCPAGRTALLTWIEKKLANIALNPVP
TAADATWLIESAYIQWAAAQPKH
>PSPTO_B0027 hypothetical protein
MIVDPDLPGLATKITQNYSNAQIAQLIRMISPVSPCALMAADEFERVMAV
LAGQNRRRAFSDRSISAARLVLVMGASVSEAALETGLTRQVVHRLMARIR
ARLEDLPADWVKVEAWLPPAAAGDVLALAQSLRSAQSQ
>PSPTO_B0030 conserved hypothetical protein
MRMSSNFRNPCMIRSDVPLSNDQIAHYVPSIFAEEAHDSRSARYLYIPTV
QVLDALRAEGFEPFMACQTRVRDQGKREHTKHMLRLRHASQILDQEANEV
ILLNSHDGSSSYQMIGGKFRFVCANGLVLGDVAADQKVRHSGRGDVVHDV
IEGAFEVLKHFEQIDHITADMKHQQLDQDEQEAFALAALAYRYDPAEGPA
PVTPSQLLMPRRREDRSSDLWTTFNRVQENTIKGGLTGRNKQGRRTTTRA
VNGIDQDVKLNRALWVLAQAMGEHRKAA
>PSPTO_B0032 mobC protein
MAKQKTFTQQDLEAARQKLADLPDLSKDKMSQAEVLQSLKEQIVELCSAK
GYSVSEVKQALADVGLNVSVREITDLTTKRKRAAPRAKPQVA
>PSPTO_B0037 hypothetical protein
MGVRQLPPAYLDLTDKDLPILSSDAGYLIGEKTVSSELVESVLSRQFDTK
HANYSSHSSAKIATGSKVY
>PSPTO_B0071 surface exclusion protein, putative
MKVQRLKTAKEGWLVVFKGLYLLAFPFLLIFAILFLIAASGSTGEDAYGF
SVFAALFAAPVLVSLTVFIHGILSRRRLLKRITTAIKAAQFFEPDVANEI
YHEGDGKYLGIDTQNGTILYVHRIRKGQVDVVALTMDDWTDREVEGNGML
RLYTKFPDLPRIEIATPWAQRWYDTLGAMEHKQKQYSTPQPFNRYVHDHL
EALERDLNVQIPRLA
>PSPTO_B0003 conserved hypothetical protein
MNRLHKTSLLAAILTASPCIMAANAHAMSCPVPQSVKYVNGIYIAPETFA
GWEGNWVSQPHKKHSIKEFSTALYLSVDKSQKGGTLTNCSYSLSGDNGVI
DLEYRKSGNENRLKTLIVSIEGQHNWIKERGAVGIQGYECTKSASECQFV
PLRLNED
>PSPTO_B0028 hypothetical protein
MPRSIYRQAHGERCAAKPAGDTGSTGSDGKRSAQAERPEALEPACRRGLK
PEGSRRAGFMAWLDAQHESPALSAARGTRISGCQRSSCTEA
>PSPTO_B0006 hypothetical protein
MGALEPFTFQIWFSQERDRPVLVRPIMPFAAQAVPAVATPLS
>PSPTO_B0050 traH protein, putative
MKYSLWAAPAAALLLSGCQSFCEKPPAAPTPSATAAPVLDRVALQQETLW
MEGAINTRSTLPTDAIRARSDLVAVDWSGDAIELLSHLARQRGQTFAWTG
VRLPLPVNLKVNGISYANLLRLIEMQTAWRATLTQLPGQLTLAFAQAEPT
KKAGGRQ
>PSPTO_B0074 conserved hypothetical protein
MRTTVTIDDALYQRALEVADPAMDKADLFREAVQTFVRIQAAKRLMALGA
TLPTMEDIARRHEKAQ
>PSPTO_B0044 hypothetical protein
MIIDEDEVRVEIKELMDLIRLDEKYASLLSNGIFPIDHEAIEFNYQRRFR
ILEISRKYGLG
>PSPTO_B0047 hypothetical protein
MPPRLYHFPRFPISPPGLARRCFFASSQPLGVPMASSEDEATTKTSSVYI
RPIRVEALNKAAIRVSYETNSSRQISPSELARYLIDNFLEAAIQKMVDDS
KR
>PSPTO_B0058 traL-1, traL protein
MKKSMCGALLMVVCCLPVVGNAAVCRSGQAASVGSQTAYERAKKASDVWA
ERERTVSDELQDCLSRIRTTSISLPSFPSLEDLMNQVADQVCQAAVDKIN
SHIPSGSDPWQSVGGSL
>PSPTO_B0059 traM-1, traM protein
MEESLEIPHLPTAEDQHTFEHAMQLQRDRALGAAFAHRCLTAVLWMAPAL
VLSVSVNGYLGWQVAHPPVKYFAAEGGRVTKIIPTDKPGHSRRDVSAFGA
DTIRQSFTLDFVHYRDQMTQLGERYSEVGFQDYYKALVASNLLKAVKDQR
MNLWVDVGPGVIRGSGTIGDKFAWEYQYPVTLKLDGQQSGSPPQRFIFTL
RIQQTDVRVKNAGLEVTQVITTNAN
>PSPTO_B0060 traN-1, traN protein
MKTSIALALWLAASGYAWADETVSPEAAPAKSAVPPSAPVTPAAGAAPSG
WATGVGVNPAAQKAGSPAQGNGPVNAAPAQQPSGNDPLPPPPSELFQKAQ
DSVSPLTPQEIRQLRGQVGEVDKAMAAPQVAIVPRISAQTVNLSPGASLP
LVRTAVNYPTSLTFIDSTGAPWNLGAAPISGNPDITPYYVPNSPVMVLYA
AKPFASGNVTVYLKGLAVPIMLYVSSGESDTKAQTWAVDARLDLRVPRRG
PGAQPGAAPEVRIGLHDRVLQGFLDGVPPKEAKQLKTTGNVPDTTVWQMG
DDLYIRTRADIRDEFESTLSSADGTHLWKLPVTPYVSFSVMGHTAALNVA
LE
>PSPTO_B0062 traP-1, traP protein
MSEFSPAEPKASTIEMPAPTQAPSRSVWQRPIVMGLSLPWLIGIALVLAL
AGWYLFGPEKTASVNRLAFENDFEQQPLPAEQSSTPPVAAAAESDLGQFK
NEVAAMIGGVRTYAEVNRTAIQRLSETIKTQGVAQQALQQQLAEAQAQNS
VLSARLSFLEGRPGATTTTQQASKPVAKTRSPLNGMRVQAIQNGMAWVYW
QDKTWAVSPGEKLGQVTVTGINPQAREVLTSAGTIK
>PSPTO_B0063 traQ-1, traQ protein
MDGSTDAIQMLVNLSHNLLTSLVNFAFTLGSLFAVTGAVSYLATHASAAR
KAPGHAEGGGKVIAVLLLCGGLAGLDQMIGAAARQLGWQGATFDAISYVD
VGTFGVAADAANAVLSLVRMLGVWFALQGMLSWKRSFKDGHTGLSASQDV
SSGTLKFVLGVFCVCNPYLLSALQKTLGLL
>PSPTO_B0064 traR-1, traR protein
MAMSKDVMLCAAVRLSIFKDGLRQHILKGLAAAIAANPVLAFAGAGGADI
AGMGNSAAVGAKSLQKNALTIAQFVGVVFVITGLVAAKNKKDNPQIKTGH
IVGSILFGVCLAVIPEIIKRSQAQVGLAPVDVG
>PSPTO_B0066 traU-1, traU protein
MPSLIRWVEDLITETSRFAVSRDLPDYCDLNTVLRLTDDDRTRHPALNAP
YVLVNDDGDYCSVYAVAGSFCDTDEAAPLEAPYSWAGRLERMMHALTAHY
RRHGHKISLVFDDDPDRGREDVERLLAPQYASVKRTGIDLTPILDENVEK
LAPWVSRERCYLVCYTGRKTLSAHELIDENRRIKQLIGQSPDARYGQNPV
LAEMAGLKIRHDAFMSAVEAAFKDDGQGVLLELLDAHAVGQALRSQVDRL
GTSEHWYPLLPDDPITPHGVRNGDDHTPFLAPQLKFQLMNQDMETNGNKL
CVNGMWHGTLSVVLGPQTPQTFAKLKALVPRGVPWRVRMDLMPGGMKSLG
MKKGTLDFMAFVPPLRPIWNSIETLTKVEQQEPVCVMTIMASTWGDSQAA
VTRHLTLLTQAFQAWGVCEVTQTFGNPVRAWASTLVASSKGSGPNLLYPP
LSEALNLLPLTRPASAWEEDGNALFATLDGKLYPVGLATPKQNKLTSVVT
GSSGQGKSVLLNKLGNVTVSSAQQRLPFMAGVDKGFSMQGQVALLRDSLP
PERKDEVVGIVLQNSPKHCRNLFDIQLGARFPIAPERNWIISMLTAMCID
PSTGNPPNERDTRQILDRVISMAYTANAEKSPRRWGRGVVPEVDTALDKS
GLIERYPAQWWDSSTWYEVRDLLFEAGFVKEAQLAQFEAVPELADMTTFL
NHEDVQSAYGRVQRDGSQELLLEYLHRCMTDACREFKMLAGRTQFLISPR
TRVIAIDLNNVMGDNTTNAGHLKTGIMFLFAGQVAGGDFVLPQYRDELLE
AVPTLYHPMHLDRLEQLDQEVKTKIYDELHNAKQVPFIFPMLETQDREQR
KFGIRTVLSSQYVSDFPDAILNSANSLYMMEVDPKDEKLLTDTIKVPKVT
LQRFQRLGSGPAADGSGVPFLGVFRIKGGGTLARILKNAMGPLELWALGS
SPTDSALRRLLYDAVGGATARAILAEAFPQGTAEKLIALRQKQAGEADSN
NVIGTLANELIKRRGYNI
>PSPTO_B0068 traX-1, traX protein
MKTEPDTTKHEDEQSPPDDKHSGTPLRRAGHVGLSILNPFSDLAVIYRRG
IKPTAQKLKLLKTLLTPASATTEADAVGVSWVQAVERSSRSVEQLVRSYQ
RIRAAWWCLMASGGALSLFLLIMLLLANLSLPSGTFLRAAVTLLLLMALA
SWGFAQTLIATYRLWQLRERRVSVAERGTFEDFLIENRWCRQVLTLGHFG
>PSPTO_B0069 traY-1, traY protein
MNLLKRFWWVGLLLVFSVPAMADSVDYQTIAAAAQKPNDLSRQALVMIFG
QVAVDPFAPSQPTLIGSLFAIINGFLAVLAMFWFLTITMKTIVKAGHQGQ
FFAGGRSALYPIMTFGGFIMILPTQSGWSLAQLVMLWATSTMGIGSANLL
TDKAVDMMDSGYSMVTQPTAPVTRGAARGIFEMNLCKYAINRELQALYGD
GEANTPLITTKGGNGQYDTGNGSAVCGSAKTPNTGRTGTWNLLFDSDVDT
SGVITAQHQALDTMQSTLDQAAQAFVDTYLSKRDQDVGSFQDAETQIQNA
AAAYENTVNQAINKIDFKDTLQSQLSSQIKSSGWVALGSWYHTFATANNK
TNDVASSTPVVTGMSNLGEHGTGDLYNQVFAAYKSQVQNSTYTAPLGTQT
AKDDGAAATAKDPNSVFVNVFKSPMQGLTNFFATKRVGTEADFSNQVNPL
IKMQTIGDYTLGVTETLMAAYAGTWAAASSASNSPLGWGAKIFAVDLGAV
VKDVLGALAPMFYFVMFALLAIGFSLAVFLPAVPFLFWMMGVFNWVVSVL
VGCAAGPMWAATHLGAEEDKGSRSAYGYIFLIDMMLRPSLMVLGFFFASV
AVAAGGTILNLLFASALANANADSIMGLFKMIGWLMIYARIATFGVTRLF
GLQASLADYVISFLGGREGANLMGGMVDNMKGMFGAAGSGAQRTPGVKMQ
PRKPGAGGHGDGIQ