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Gene list

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COG category: Unclassified
Gene type: CDS
Genomic element: pPBPR1

Number of genes found: 36

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# Photobacterium profundum, ss9

>PBPRC0037 conserved hypothetical protein [Photobacterium profundum SS9]
MTTFINIHTLISHSSSMMNRDDSGLQKTAVFGGTTRSRISSQCLKRAIRQ
SDIYKESVAELSIRTNKMDELLTLCIEQLPEVETSVIEDVLLNMGSKVKK
EKNKETGETSRYFDAVQPYSIGAIREAINMVQSGTELKALKKIVQIPTID
VALSGRMDASCPERNVEAAMSVAHSLTTHSADIEVDWFTACDDLATQGSG
HIGTTEFSSGVFYRYASIDVDLLAKNIGKSVEEVSDIINTMVRCFAQVTP
SAKQKTFAAHNHADFVMVTQSNQPLSLANAFRKPILNTGEVMEHSIESLV
KHYEKLVEGYELDSKAIVFDMTDVAQSKRINVVNTISDIRF
>PBPRC0028 hypothetical protein [Photobacterium profundum SS9]
MPFPPPTHGHEESSIGETLMDHLVSKPSATRIVALDRDFDRLHLEKGDHL
VIEQGRNPHDGCTAMMELDGDIFCAQLYWQKGQWYAATDDRRGIVTEDML
LLGVATRAIKNQIID
>PBPRC0047 Predicted orf
MKTMLTVGDLNLGSYYLGRGRNGNVALWDGDVFLVACSVPQRRLTDDGKI
VYGPDRRAEMKREGHFDTEYGCFQPFVEINEGKGIPYQDERRSSLYCESL
VV
>PBPRC0045 hypothetical protein [Photobacterium profundum SS9]
MYIFNTAKGAITMASKAKTKLTITTISANLSAKGQNMKAGRLRAILKRLG
LKNYKSNWGVLKIVKGAYRDAVKRGDLIAAYNIKHAFVRDNGRYAWKN
>PBPRC0066 hypothetical protein [Photobacterium profundum SS9]
MLCVIMLRMCVMTFAEPSTSIPPSPPVAPNKGEYDAEYRAKRKLRKQTLI
ELHHDVVERENQKLQAQDKTANFAIGFRARRLLRNGEVETLPQEFARILK
GCEEFIENPNRFPSLRAWCDATNNVQSRRLIAKVLACILPNTDLIGGRVG
VPTEAGIRTISYDQLQEDYALRFGEFISPNSFKKAIQHLGHAGYFHSERI
NVCVDKKGGTVRSAAAFKQFTERFFSDLKVVRYSNICQMIIATRERQKKK
GLRFFWVARRLLMEGVQQIFNASILDDYADTTSTVFSAYQHPQQVPL
>PBPRC0014 hypothetical sex pilus assembly and synthesis protein (TraF) [Photobacterium profundum SS9]
MTLTPSLPFGALFFTTPLLVMAILTSPVTRAEQPPGWKWYNDPLLIKEKA
LTPPPPTPSVTVTRTLSPTQQMQWFHRYHDDTKNDALINKDDVKKAEKLM
LLNQFAYNMSSDFGMTFQKALLMNPDLSYTKDRPTEQAARSTYLQMEREK
KIRAVRQLAGSGWGLFFVYEGASPMAEKLAPSVQQFADAHGIEVLGISLD
GTQLASIHQNRDNSNHIQVPFSPALVLVNPNTQEMKPLAYGFIAQEDLLG
RFLNVATDFAPDF
>PBPRC0020 hypothetical protein [Photobacterium profundum SS9]
MIQTYLRNGKNKQRHQHKPRRYRHQITDHGAPMSSYAMNEYLTEMFFCMS
RLALCYFSVLFVIITFISKKRTHIVQAIVLAGIAVYNSFSAIPVFTYLSL
FIMTLLFLRRSFDIVEAGNFFNLPAFKIILFMSTVIIAIWGIMGLGLLGF
FIIYILRIDPMFSL
>PBPRC0056 Predicted orf
MLLVEVNDERKQYCPFPNKGKKYPEQLIKLPSSGVVFDCISRGKTLGTTR
NEKERAWLYQKTRIVSSLSLSSVKKSSSEHWASTWLKLMGLDTMMVWKIQ
RLTLKMK
>PBPRC0007 hypothetical protein [Photobacterium profundum SS9]
MRYFMLSLIALLLTGCSAGMKSNFSCEKIGGIEGCASMTDVRSAMDRGEF
SPQGHVIKGEASHAYLTPTPSFIPLPRRNREGAPLRTQEHVQKITIFPFT
TPDGYYIDTTDVYIADDSQWTGRPVQAIRKD
>PBPRC0016 putative sex pilus assembly and mating pair (TraG) [Photobacterium profundum SS9]
MLTYNLGVNRMTLAVYTYSNGDVAKEVFNAIATFFATNSFASMLQICTFF
AVIATGFHFFMTRDANAIPKWAAVYLMVPLLLINTKVGVQIIDLTDPTGN
YAVANVPMIVAGPTYLSSTYMYGVTSSIESIFHSPDDEQYSKTGMVFGAK
LYKLSRQSQLEDSQLKGHWVHYLQSCIVGDITLNQKYTWQQLANTDDIFD
FLTNHSPSPLRRIQMGPNDFPTCKDALPRLKAGFTADAQKSLSLMAHKLY
ANKVATNQARFTAGLQGSYAKYAGISRTASQITTQNMAINAIRNGLTDSA
AVNGNTAAAFNYAYTQNKMQTTSMWTGMALQAREFLPMMQSILFLLFGCV
SILVVALAMLPGMTKLVLSNYIKGFVYLGTWPILFAFINFIMTTRLSLSS
SAVANLYNGITLSNVDALAEMHSRYAAMTGMLMMSVPVIVGFIVKGGASV
MSNMSHQLAATMGSVNSRTSASAASGDINLGNGQVDNFSFNNMNGNKTDT
SALQRTHGMTVQNDTGGMTTTFAGGGQVLDGSNTISRGLGVDLNSREGVS
RSLRSLASETLSQAEGHRSQYNESTDKTFDQIVQLGQNTSKGLSYGDTAS
NKEGASAMKAASTMQSTVEEYAKVNNISHEQAESQLTSKWVGGSFSVGGS
SPKLFGLGVSGSAEGGIRGTWDKRTSDTASNSESERESQALQKQFNESAN
VLKNYDLTDSSSETRTKTDTALSNIGDSLRDTESLGLTAHTEFSKSQSLN
RQADKVEDVSNGVSFNLMPDFQSYMRQENPDHYEGIMYGSTESLREERAG
YVRQFMNEPETQAKLERYTDDSLPQTEKELVNDFDQQTGELALTPAQRTA
QQQQSEELQTRHDEGAELIIEGKGVREYFDENKFNTIDREVHESINTTQE
TVTDNAVQHPSPEPAPQKDIEAVNDNVEPQSQPITHPAMGRGSR
>PBPRC0024 Predicted orf
MISRCEVVMNTVSLINAMHTLRCSHRQVNGLLLAKKKINKQLTMSRQYTA
LCERDKVQLRAMGFSQRVCDRVGDQRFYHYSDLQLLEESLNTATELPWSI
TLFNGGAWINTRFNRLVPALVFHITSSGKYKLSLFSLNINRGDNSVIMDR
YY
>PBPRC0003 hypothetical protein [Photobacterium profundum SS9]
MSTKLGVLIIATGVALAISQPALAADIFAGSKTVIKENADGDSGLYMGMT
VAGLGSAALGGFLTKNWGGAIGGFVTGMIFANTAMAIVGL
>PBPRC0002 hypothetical protein [Photobacterium profundum SS9]
MGCIHSVGAIPIAVFTPSWTDDVWHSPYRREYCDLSDERLHRVLWVILLH
MTSSFYIYQNNLFGMYKSRAFFPTDTKHGYDMSPHLNFFFSLIL
>PBPRC0048 hypothetical protein [Photobacterium profundum SS9]
MQNRELTYQPSPAFAQLAQEETAIKIWEFLCEGDNIIRAETATFLKKPAL
EALGPILHSSFDVFNKDLVEKSVFDAHKKLSGNMMRQIMEHLGYVIDKTG
VQVVNKTIFKTATRYKKAD
>PBPRC0046 Predicted orf
MKRTPFEQLGGRNLSLLPWIQTVFVKHILIKSFIINFFKFKCPEDICLLL
LSFSSCPPQFQLKIQHTKYISHQIACFLSMFSVGNQC
>PBPRC0012 hypothetical conjugative transfer protein trbC [Photobacterium profundum SS9]
MPLPLLSTTRSHRIAGLILLSALNCNLTAANTLGYSQTELKALQQREIAI
QAPEHAPTLDLDALWQNAKQFETDMRTTQHDALSPILKQANIGDNPNSAA
KGVIIFASLTMPSTALKQLMMQSSDLQVPIIIRGVLPQGFPATVAAIQSL
IHSEDDEVINSGMAINPLWFKQLGIQRVPAFAVIKPGACLPQQPCQDSDF
DVLVGNVSLYDALATLARDGDVPNIAQQVLSRRK
>PBPRC0038 hypothetical protein [Photobacterium profundum SS9]
MYQQIYQAYCRLPKGDQADLKRCNLSKLADSSAYFRVLKFSGTNDNKQTQ
RILYLMVAIDLTQEEDGSSVAIALLKAGVNENQIQQIIRSGDNGIEYLKR
QLVRCKNIQLKSLGKLAQYWGENTRRQLLKEYILADQD
>PBPRC0058 hypothetical protein [Photobacterium profundum SS9]
MTGDLNREILVGRDWANGTFKDKIFRFSSYTFPACKSCNDEFGILERETK
PVLIDVMSGNNVEERDLNTLLDWFDKIRTGLWLSDYVLNKNHNGINPHYF
ISDRVARSDRALIIYKNDKDPDGVNFIGTDGPIFQTMPSVFGLKINNFYF
ISISAPLLVHKELGLSYPKLHEIDSETEISWYSFSDGTQKIAIPSFINRF
PENGITLLQAIKLKDDKLTEGSGLLYDSEHDRRIFNFDNENRRSIFISGK
DITKYPKESTRLTIKDVNYPVMFNLQLGLHLMECQEDMFKTNIIYDNITG
GKSEKVKNHLDYITNAHGVLKGVYKIQLRHLFSGVLKDLTMRIK
>PBPRC0006 putative sex pilus assembly and synthesis protein (TraB) [Photobacterium profundum SS9]
MVMNVLKWFKTDPEGDFEDGASLNTQNKQRNLIALASFTSVLLLLIAAAV
AYNKSAFSAATDKDESKPIDFGAVVDVEFTAKDNQSALSAQQVSVTRLEK
TLASMEKTLKTQTASYDAFRAKIKSEQESVARGYQEQVAFMQDDFNTRLE
ALNTPGDSDIPSHTTMTTQGRYLGQNTTGARQPPSSDGLAQDGRYDHDSQ
SLGVQGGIDHTALVWNTGPTDARKRTIENYVPSGTVVTAVITGGADANAG
VNGQGDTTPIVFQTLDNGLLPNGKKSRLNNCSITAAVYGEVSSSRGIART
DRMSCIFADDEIIDIPIQATVFNFGRNGIRGNTVIQNGKIVQMAGISSLL
TATGSAAKSLSETTSTSALGSTSSVNSGDILLNMLGEGGEGAGKTLADYY
IKLAEQYHPIIELNPGNVVNIVILKGFPLDAVGIEEYEAKLAQQQSTAPS
PAAQIMETITNPLLSQLPAGTRPTPRQANLNTQPFGQPQ
>PBPRC0065 hypothetical protein [Photobacterium profundum SS9]
MLFPLRTRIIASGQRDNIRRLNSFSSFGNPLSGRPVLFTINSMFIQHLET
ITVYNYSDYIHSMFKSNCLTSHINRLKIIHLSCYIVTVHLI
>PBPRC0051 Predicted orf
MKNAVKKLNKKRSSSKNHRNTAKVKRNSLKPFLKVFSLERQAQCWLLLSC
LTGMLNVRIVVIESLKIMVMNFNKQGYVQSWQLCGFCCLLTLYDHARSAQ
I
>PBPRC0013 conserved hypothetical protein [Photobacterium profundum SS9]
MTGRVCTVIALMFIASTAIASQEQRYTDNVNWAKQSATVTQGQSGFTAFS
VNEYCKDTACQQQLSNPEQTRYRNDATAMDSAKAAAIATDDNAQAVQANF
NAGRPTIDPNDPAYSQAVGYMNDAYTISHGLVSQYHDCKKGQTCEFSESI
KHCAQPTHTPYTCDITPYVISKNEHTGSQRFPMSYPRSNAGNARVTSAGL
QITLPAKVIVTRIELPPFGVQSNTRSVSIDANGRPIKNATASPYWSDPWD
MCGPIGSFCWSEVGAQTMNVSIDTSTLNLTIRAADGRTGIHLMDKGTITV
HWKTRTLNIGWKNSCGPTLPACSKTQEVCVEGGGSRWLHGVYQYLPCWKK
RQTYHCTYPDTCAALSTCVEQSRQCSKNTQGVCVQEKVTKKCTVQTCVDT
NLICGEQSFCLDGECYSPTREQNTEFNQAASSLAALADAAKGLGDPPLLF
TGKAMTCSKKPVGLSDCCKDSGWGSDVGLAQCNDEEKALMQAKEKKLTIS
LGQYCAEKVLGVCIRKKKAYCTYDSKLARIVQEQGKPQLGMNFGSAKHPD
CSAITPEQMQQMDFSNMDFSDFYSDLHNNMTLPDNNQIQQRIKETLGGKQ
>PBPRC0039 hypothetical protein [Photobacterium profundum SS9]
MMYISMVALSVIDTYEQHQAIWELFPNSSERKRDHLFRVENINTSGQVMV
LLQSASEPQSNVKATVLQSKLFDPQISQGEYYKFKLLANPTKCLSQGKKV
IEIKDENEQIQWLQRKLRGANVTVTALESVLVKSRKSFTSRFVCFEGILQ
VDKPDQIYSVLVMGIGRKKHAGAGLLSLAKAS
>PBPRC0041 unknown protein [Photobacterium profundum SS9]
MVWGVLSQIAFFSQNPNLKSIENRWLKNEKTSKFAICDRTRHCLTEYSIS
YEGLIKPLLGAALAFAKRSQDERSEMLERTRQVNPVLFDSVDSDD
>PBPRC0036 hypothetical protein [Photobacterium profundum SS9]
MDENNMHHVMKTLILKTEGLSAYGLQTFDVHRRVNHFPTRSAIVGILCAA
LGISRDEHAKIHELSTKLTIAVQVHHTGEKMMDYHTVENFRSPLGKIQKG
TKPTYREYWCDSEHSFAISADEQTIKLLIQAVKSPVFTIFQGRKCCPLTR
PLLECVLEESNPSDALKHLGEKGQIFSDIQGSNHVATLQVRDLITPVARK
YAIRTVYVSGRSEGEACESA
>PBPRC0061 hypothetical protein [Photobacterium profundum SS9]
MNIFEFWREVTEDKSGRYIHHEDESVLSELSHLVGDDLDFSFPPGPIFGP
LKTAKIVLCYANPGIDDLSLDTIRRPEFQTELFDQLAGINNYPHHLSGWK
EWFNQRANSLFDGDIELAGKHISVFNLIPYASVNMDKVEKVANCLPSVWV
AQNYLRSVLIPKAKSGDILLIMCRSGHLWGLKSAHGCDNILINNVRSGFS
QDVKNKVKEWCHRQGI
>PBPRC0021 hypothetical protein [Photobacterium profundum SS9]
MGGEVWYVMTKIGMNKGLATAIAMALVTCVAVWFVLGGGAEKIARDEILK
AEVNYASTLAYRLVRFDVENGIADRKAADRARANIGTYFRQVDGRCGRYR
QARDFLLCANRVLGEYFEYEGTADATNTYAMGHSDCDLNAFLVMDAAAMH
GVETSVMYTPGHALVTWAGEEGKTYYLETTVSDNRGKLADIKDTFYVRTN
DDTYYTPYDDEAAFVLYQAVVYRQMADKGYIVGLFDALPDNTLVADSYYE
YLMTHGRIGPDEIADITERLKTATTSETLSLILADWYLKLGDTDRALSVL
GGLPPQFCTYDCIWLGIEAWADHLGYHEQGAQISDFYREYLKDWKIFESR
QRIRYLLVTGVIGVLVVVIFVSVFLRRRFARKSCQR
>PBPRC0004 hypothetical sex pilus assembly and synthesis protein (TraE)
MHPIASARPSLPSRPARKNATGSTKAFTMLNNNKITILALSKALNGLLLL
FTIGLLFTVVILGGALATQINSKSRTLVPPIISRAFTISDGAVDSSYLQQ
MGEYVTYLKLNMTPKNVERQYGQLLDYVDSEAWPNIQPTLMADAQQIIKE
NVSSRFDIDTVNVSVPTLKVKLTGTLQKHVGSRALEPELASYIVDFAYEH
GVISLLSIRKIKEST
>PBPRC0023 hypothetical protein [Photobacterium profundum SS9]
MTEKVVMTKSKRVQVYIEDSELLKTLDLYMKQNPDKSQSEACGDLMAIGA
RVWKHSQEDDGEQLTVMDMLEKLLRSSYSTQAFLHLSGNKNIKKVDDDNS
EAFELKSIIEKANAISKDKVDELLGKEE
>PBPRC0005 hypothetical protein [Photobacterium profundum SS9]
MNRWRWFAIIIAGCVSATAHAKNTPGTTYTFNDNDTVPVILSSVDINRLV
VKNDKITGIDCPAGFCVVSGTKTDTSGSARLKLNISVAFVAYVSTQKGRQ
FGMFITPQAIPGITSEFIGVQNTQHTPSVFEKKAPYTTQLAEFTAQMIRW
TNTGEMMGGFSLHPVDPKTVTNTLTARLAVIPDTIFVGNTFSGIRYKLKN
NTTTTQTLTTAQFYSRAARSAALSTDQLAPNDTAWLYIVTGGRW
>PBPRC0031 hypothetical protein [Photobacterium profundum SS9]
MSKEKYHQQLSDVIENSLLHLYGQVASNDRFVPLARRNDIVCKFLKPKLK
QPCYKSIKGDIKRMILVGQRKDGDLEAKLNELHSMSVDFQKKANDAQKLF
DLLSILLSKHGFDSKIFDESAQAEPEVIYVLQDHLENCFEDNGTQIAPVS
MLIESDRSLELIEFINATQLFSAELKESDSNNQQSHILLHPVK
>PBPRC0009 Predicted orf
MVLTIRRHFPVGEVRHLNWHLVRGSHHQRWSLYSVLPQPLSLVQGCDQYS
FFSLLVFLIRQHIHGLLRNGTGDIRCATNDGGAHNNHRVIVVAIRAQHGV
QCCRETRNVPLLLGRVKITLLDIFLKSGQGGVHVHLHQ
>PBPRC0067 hypothetical protein [Photobacterium profundum SS9]
MKKAVDELEHELNESRLFAKQMDNSQVLVIDYIYFWYGDKHGAKAKFARD
QGVSSQQVNSWLKKKCYIENKQIKHPDPNPIDLIKPSWIKSYFI
>PBPRC0010 hypothetical sex pilus assembly and synthesis protein (TraW) [Photobacterium profundum SS9]
MCLMGKATQGQCITLFLLSFFCLPLPTDAKNLGVFGPVFPIGEIDMLDWI
DNRLRTFEKNGEIDAMKQRMQARVKASVMRPSPVQGLSTTTAPKTYFIDP
TLTLAAPVKDSLGNELYPKGTRINPFDSTTWPAAEKQNLPRFTFSKQLVL
FDGDDPQQRQWAQQYLAPLPVKWILTNGEPAALSRLLDSRVYFDQQGKLT
REFQIKHVPVVISQSGTRWQVTEVDVSPLKEK
>PBPRC0032 Predicted orf
MPDGAFGVVFPVLTGLNRRLNQVGLFHQRVPRTHGAEPDGIYLTDSACYV
FPVLTGLNRGEISEINGTTCVPRTHGAEPLNQAVALRSLMCSPYSRG
>PBPRC0011 putative sex pilus assembly and synthesis protein (TraU) [Photobacterium profundum SS9]
MRRTLPWAYLLILFFTRPLYAGGSACTGTFVNPVTDICWSCIFPMTIGSV
PIVASVYPDTENPTMPISFCPKPPPVYMQIGLNIGYWEPYSLVDVTRKPY
CMVNMGMELNAGEMQQIGGRSTSRDNDSSDGGFYHAHWYKYPIVYWLQII
QSVACMSTDSFDVSYMTEIDPMWDDDELAFILNPEAILFGNLIAQLACVP
EAIMTSTNVALPIDALFWCLGSQGSAYPLTGTTNYRDTPIQAGTLIMERL
NFKLHREGIVWETRGADGAICYQWPEPILPKSRYRYQMTNVIPDPLWCHP
YTTTTALWEMGHDNPVTGDNFGFVNFRKRNCVFL